At4g04980-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0392441 |
| rosa_multiflora | Rmu_sc0004465.1_g000026 Rmu_sc0006576.1_g000023 Rmu_sc0007753.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00009700 Rroxscaffold_2G00130700 Rroxscaffold_4G00277550 Rroxscaffold_4G00309110 Rroxscaffold_4G00310040 |
| rosa_samantha | Rh1DG085900 Rh1DG285100 Rh4AG080900 Rh4DG098600 Rh5BG267100 Rh5DG221200 Rh5DG273700 Rh5DG512300 Rh6AG030700 Rh6BG476200 Rh6CG512300 Rh6CG523800 Rh7AG262200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 112 |
| AciI | CCGC | 1 cut(s) | 112 |
| AcuI | CTGAAG | 1 cut(s) | 126 |
| AgsI | TTSAA | 4 cut(s) | 47, 56, 78, 118 |
| AluBI | AGCT | 3 cut(s) | 139, 181, 209 |
| AluI | AGCT | 3 cut(s) | 139, 181, 209 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 221 |
| AseI | ATTAAT | 1 cut(s) | 299 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 63 |
| BfaI | CTAG | 1 cut(s) | 206 |
| BmsI | GCATC | 1 cut(s) | 283 |
| BpmI | CTGGAG | 1 cut(s) | 138 |
| BsaJI | CCNNGG | 1 cut(s) | 270 |
| BseDI | CCNNGG | 1 cut(s) | 270 |
| BseGI | GGATG | 2 cut(s) | 129, 151 |
| BslFI | GGGAC | 1 cut(s) | 300 |
| BsmFI | GGGAC | 1 cut(s) | 300 |
| BspACI | CCGC | 1 cut(s) | 112 |
| BspHI | TCATGA | 1 cut(s) | 334 |
| BspQI | GCTCTTC | 1 cut(s) | 102 |
| BsrBI | CCGCTC | 1 cut(s) | 112 |
| BssECI | CCNNGG | 1 cut(s) | 270 |
| BssT1I | CCWWGG | 1 cut(s) | 270 |
| Bst4CI | ACNGT | 1 cut(s) | 223 |
| Bst6I | CTCTTC | 1 cut(s) | 102 |
| BstDEI | CTNAG | 1 cut(s) | 342 |
| BstF5I | GGATG | 2 cut(s) | 129, 151 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 167 |
| BtsCI | GGATG | 2 cut(s) | 129, 151 |
| CaiI | CAGNNNCTG | 1 cut(s) | 221 |
| CciI | TCATGA | 1 cut(s) | 334 |
| CviAII | CATG | 1 cut(s) | 335 |
| CviJI | RGCY | 6 cut(s) | 5, 83, 139, 158, 181, 209 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 83, 139, 158, 181, 209 |
| DdeI | CTNAG | 1 cut(s) | 342 |
| Eam1104I | CTCTTC | 1 cut(s) | 102 |
| EarI | CTCTTC | 1 cut(s) | 102 |
| Eco130I | CCWWGG | 1 cut(s) | 270 |
| Eco57I | CTGAAG | 1 cut(s) | 126 |
| EcoT14I | CCWWGG | 1 cut(s) | 270 |
| EcoT22I | ATGCAT | 1 cut(s) | 298 |
| ErhI | CCWWGG | 1 cut(s) | 270 |
| FaeI | CATG | 1 cut(s) | 338 |
| FaiI | YATR | 6 cut(s) | 23, 40, 95, 143, 279, 336 |
| FaqI | GGGAC | 1 cut(s) | 300 |
| FatI | CATG | 1 cut(s) | 334 |
| FokI | GGATG | 2 cut(s) | 136, 158 |
| FspBI | CTAG | 1 cut(s) | 206 |
| GsuI | CTGGAG | 1 cut(s) | 138 |
| Hin1II | CATG | 1 cut(s) | 338 |
| HinfI | GANTC | 1 cut(s) | 149 |
| Hpy188I | TCNGA | 1 cut(s) | 69 |
| Hpy188III | TCNNGA | 1 cut(s) | 335 |
| HpyCH4III | ACNGT | 1 cut(s) | 223 |
| HpyCH4V | TGCA | 2 cut(s) | 230, 296 |
| HpyF3I | CTNAG | 1 cut(s) | 342 |
| Hsp92II | CATG | 1 cut(s) | 338 |
| LguI | GCTCTTC | 1 cut(s) | 102 |
| LmnI | GCTCC | 1 cut(s) | 136 |
| LpnPI | CCDG | 3 cut(s) | 168, 197, 269 |
| LweI | GCATC | 1 cut(s) | 283 |
| MaeI | CTAG | 1 cut(s) | 206 |
| MaeIII | GTNAC | 1 cut(s) | 217 |
| MbiI | CCGCTC | 1 cut(s) | 112 |
| MboII | GAAGA | 3 cut(s) | 68, 71, 119 |
| MluCI | AATT | 1 cut(s) | 51 |
| Mph1103I | ATGCAT | 1 cut(s) | 298 |
| MroXI | GAANNNNTTC | 1 cut(s) | 63 |
| MseI | TTAA | 2 cut(s) | 86, 299 |
| NlaIII | CATG | 1 cut(s) | 338 |
| NsiI | ATGCAT | 1 cut(s) | 298 |
| PagI | TCATGA | 1 cut(s) | 334 |
| PciSI | GCTCTTC | 1 cut(s) | 102 |
| PdmI | GAANNNNTTC | 1 cut(s) | 63 |
| PfeI | GAWTC | 1 cut(s) | 149 |
| PshBI | ATTAAT | 1 cut(s) | 299 |
| PstNI | CAGNNNCTG | 1 cut(s) | 221 |
| SapI | GCTCTTC | 1 cut(s) | 102 |
| SaqAI | TTAA | 2 cut(s) | 86, 299 |
| SetI | ASST | 4 cut(s) | 141, 183, 211, 334 |
| SfaNI | GCATC | 1 cut(s) | 283 |
| SgeI | CNNG | 9 cut(s) | 167, 179, 203, 218, 224, 283, 296, 302, 316 |
| Sse9I | AATT | 1 cut(s) | 51 |
| SsiI | CCGC | 1 cut(s) | 112 |
| SspI | AATATT | 1 cut(s) | 74 |
| SspMI | CTAG | 1 cut(s) | 206 |
| StyI | CCWWGG | 1 cut(s) | 270 |
| TaaI | ACNGT | 1 cut(s) | 223 |
| TasI | AATT | 1 cut(s) | 51 |
| TfiI | GAWTC | 1 cut(s) | 149 |
| Tru1I | TTAA | 2 cut(s) | 86, 299 |
| Tru9I | TTAA | 2 cut(s) | 86, 299 |
| TspDTI | ATGAA | 2 cut(s) | 162, 189 |
| VspI | ATTAAT | 1 cut(s) | 299 |
| XmnI | GAANNNNTTC | 1 cut(s) | 63 |
| XspI | CTAG | 1 cut(s) | 206 |
| Zsp2I | ATGCAT | 1 cut(s) | 298 |