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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0392441 |
| rosa_multiflora | Rmu_sc0004465.1_g000026 Rmu_sc0006576.1_g000023 Rmu_sc0007753.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00009700 Rroxscaffold_2G00130700 Rroxscaffold_4G00277550 Rroxscaffold_4G00309110 Rroxscaffold_4G00310040 |
| rosa_samantha | Rh1DG085900 Rh1DG285100 Rh4AG080900 Rh4DG098600 Rh5BG267100 Rh5DG221200 Rh5DG273700 Rh5DG512300 Rh6AG030700 Rh6BG476200 Rh6CG512300 Rh6CG523800 Rh7AG262200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 109 |
| Acc16I | TGCGCA | 1 cut(s) | 29 |
| Acc36I | ACCTGC | 2 cut(s) | 109, 224 |
| AcuI | CTGAAG | 1 cut(s) | 273 |
| AfaI | GTAC | 2 cut(s) | 77, 152 |
| AgsI | TTSAA | 1 cut(s) | 62 |
| AluBI | AGCT | 3 cut(s) | 218, 257, 308 |
| AluI | AGCT | 3 cut(s) | 218, 257, 308 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 320 |
| ApeKI | GCWGC | 3 cut(s) | 136, 203, 225 |
| AseI | ATTAAT | 1 cut(s) | 398 |
| AspLEI | GCGC | 1 cut(s) | 30 |
| AsuHPI | GGTGA | 1 cut(s) | 164 |
| BbvI | GCAGC | 3 cut(s) | 123, 190, 237 |
| BceAI | ACGGC | 1 cut(s) | 264 |
| BclI | TGATCA | 1 cut(s) | 88 |
| BfaI | CTAG | 1 cut(s) | 305 |
| BfmI | CTRYAG | 2 cut(s) | 116, 258 |
| BfuAI | ACCTGC | 2 cut(s) | 109, 224 |
| BisI | GCNGC | 3 cut(s) | 137, 204, 226 |
| BlsI | GCNGC | 3 cut(s) | 138, 205, 227 |
| BmsI | GCATC | 1 cut(s) | 382 |
| BsaJI | CCNNGG | 1 cut(s) | 369 |
| BseDI | CCNNGG | 1 cut(s) | 369 |
| BseXI | GCAGC | 3 cut(s) | 123, 190, 237 |
| BseYI | CCCAGC | 1 cut(s) | 218 |
| BslFI | GGGAC | 2 cut(s) | 97, 399 |
| BsmFI | GGGAC | 2 cut(s) | 97, 399 |
| Bsp1407I | TGTACA | 1 cut(s) | 75 |
| Bsp143I | GATC | 1 cut(s) | 88 |
| BspHI | TCATGA | 1 cut(s) | 433 |
| BspMAI | CTGCAG | 1 cut(s) | 120 |
| BspMI | ACCTGC | 2 cut(s) | 109, 224 |
| BsrGI | TGTACA | 1 cut(s) | 75 |
| BssECI | CCNNGG | 1 cut(s) | 369 |
| BssMI | GATC | 1 cut(s) | 88 |
| BssT1I | CCWWGG | 1 cut(s) | 369 |
| Bst4CI | ACNGT | 2 cut(s) | 58, 322 |
| BstAUI | TGTACA | 1 cut(s) | 75 |
| BstDEI | CTNAG | 1 cut(s) | 441 |
| BstHHI | GCGC | 1 cut(s) | 30 |
| BstKTI | GATC | 1 cut(s) | 91 |
| BstMBI | GATC | 1 cut(s) | 88 |
| BstSFI | CTRYAG | 2 cut(s) | 116, 258 |
| BstV1I | GCAGC | 3 cut(s) | 123, 190, 237 |
| BtsIMutI | CAGTG | 1 cut(s) | 54 |
| BveI | ACCTGC | 2 cut(s) | 109, 224 |
| CaiI | CAGNNNCTG | 1 cut(s) | 320 |
| CciI | TCATGA | 1 cut(s) | 433 |
| CfoI | GCGC | 1 cut(s) | 30 |
| Csp6I | GTAC | 2 cut(s) | 76, 151 |
| CviAII | CATG | 1 cut(s) | 434 |
| CviJI | RGCY | 7 cut(s) | 23, 71, 218, 251, 257, 280, 308 |
| CviKI_1 | RGCY | 7 cut(s) | 23, 71, 218, 251, 257, 280, 308 |
| CviQI | GTAC | 2 cut(s) | 76, 151 |
| DdeI | CTNAG | 1 cut(s) | 441 |
| DpnI | GATC | 1 cut(s) | 90 |
| DpnII | GATC | 1 cut(s) | 88 |
| Eco130I | CCWWGG | 1 cut(s) | 369 |
| Eco57I | CTGAAG | 1 cut(s) | 273 |
| EcoT14I | CCWWGG | 1 cut(s) | 369 |
| EcoT22I | ATGCAT | 1 cut(s) | 397 |
| ErhI | CCWWGG | 1 cut(s) | 369 |
| FaeI | CATG | 1 cut(s) | 437 |
| FaiI | YATR | 3 cut(s) | 269, 378, 435 |
| FaqI | GGGAC | 2 cut(s) | 97, 399 |
| FatI | CATG | 1 cut(s) | 433 |
| FbaI | TGATCA | 1 cut(s) | 88 |
| Fnu4HI | GCNGC | 3 cut(s) | 137, 204, 226 |
| Fsp4HI | GCNGC | 3 cut(s) | 137, 204, 226 |
| FspBI | CTAG | 1 cut(s) | 305 |
| FspI | TGCGCA | 1 cut(s) | 29 |
| GlaI | GCGC | 1 cut(s) | 29 |
| GluI | GCNGC | 3 cut(s) | 137, 204, 226 |
| GsaI | CCCAGC | 1 cut(s) | 222 |
| HhaI | GCGC | 1 cut(s) | 30 |
| Hin1II | CATG | 1 cut(s) | 437 |
| Hin6I | GCGC | 1 cut(s) | 28 |
| HinP1I | GCGC | 1 cut(s) | 28 |
| HphI | GGTGA | 1 cut(s) | 164 |
| Hpy166II | GTNNAC | 1 cut(s) | 54 |
| Hpy188I | TCNGA | 2 cut(s) | 102, 113 |
| Hpy188III | TCNNGA | 1 cut(s) | 434 |
| Hpy8I | GTNNAC | 1 cut(s) | 54 |
| HpyCH4III | ACNGT | 2 cut(s) | 58, 322 |
| HpyCH4V | TGCA | 3 cut(s) | 118, 329, 395 |
| HpyF3I | CTNAG | 1 cut(s) | 441 |
| Hsp92II | CATG | 1 cut(s) | 437 |
| HspAI | GCGC | 1 cut(s) | 28 |
| Ksp22I | TGATCA | 1 cut(s) | 88 |
| Kzo9I | GATC | 1 cut(s) | 88 |
| LmnI | GCTCC | 2 cut(s) | 215, 222 |
| LpnPI | CCDG | 6 cut(s) | 4, 104, 204, 219, 296, 368 |
| Lsp1109I | GCAGC | 3 cut(s) | 123, 190, 237 |
| LweI | GCATC | 1 cut(s) | 382 |
| MaeI | CTAG | 1 cut(s) | 305 |
| MaeIII | GTNAC | 1 cut(s) | 316 |
| MalI | GATC | 1 cut(s) | 90 |
| MboI | GATC | 1 cut(s) | 88 |
| MboII | GAAGA | 2 cut(s) | 74, 134 |
| MluCI | AATT | 1 cut(s) | 65 |
| MnlI | CCTC | 2 cut(s) | 124, 201 |
| Mph1103I | ATGCAT | 1 cut(s) | 397 |
| MseI | TTAA | 1 cut(s) | 398 |
| MslI | CAYNNNNRTG | 1 cut(s) | 198 |
| NdeII | GATC | 1 cut(s) | 88 |
| NlaIII | CATG | 1 cut(s) | 437 |
| NsbI | TGCGCA | 1 cut(s) | 29 |
| NsiI | ATGCAT | 1 cut(s) | 397 |
| PagI | TCATGA | 1 cut(s) | 433 |
| PaqCI | CACCTGC | 1 cut(s) | 109 |
| PkrI | GCNGC | 3 cut(s) | 138, 205, 227 |
| PshBI | ATTAAT | 1 cut(s) | 398 |
| PspFI | CCCAGC | 1 cut(s) | 218 |
| PstI | CTGCAG | 1 cut(s) | 120 |
| PstNI | CAGNNNCTG | 1 cut(s) | 320 |
| RsaI | GTAC | 2 cut(s) | 77, 152 |
| RsaNI | GTAC | 2 cut(s) | 76, 151 |
| RseI | CAYNNNNRTG | 1 cut(s) | 198 |
| SaqAI | TTAA | 1 cut(s) | 398 |
| SatI | GCNGC | 3 cut(s) | 137, 204, 226 |
| Sau3AI | GATC | 1 cut(s) | 88 |
| SetI | ASST | 8 cut(s) | 123, 135, 193, 220, 238, 259, 310, 433 |
| SfaNI | GCATC | 1 cut(s) | 382 |
| SfcI | CTRYAG | 2 cut(s) | 116, 258 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 198 |
| Sse9I | AATT | 1 cut(s) | 65 |
| SspMI | CTAG | 1 cut(s) | 305 |
| StyI | CCWWGG | 1 cut(s) | 369 |
| TaaI | ACNGT | 2 cut(s) | 58, 322 |
| TaqI | TCGA | 1 cut(s) | 238 |
| TasI | AATT | 1 cut(s) | 65 |
| TatI | WGTACW | 1 cut(s) | 75 |
| Tru1I | TTAA | 1 cut(s) | 398 |
| Tru9I | TTAA | 1 cut(s) | 398 |
| TscAI | CASTG | 1 cut(s) | 61 |
| TseI | GCWGC | 3 cut(s) | 136, 203, 225 |
| TspDTI | ATGAA | 1 cut(s) | 288 |
| TspRI | CASTG | 1 cut(s) | 61 |
| VspI | ATTAAT | 1 cut(s) | 398 |
| XspI | CTAG | 1 cut(s) | 305 |
| Zsp2I | ATGCAT | 1 cut(s) | 397 |