RNA recognition motif
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0392441 |
| rosa_multiflora | Rmu_sc0004465.1_g000026 Rmu_sc0006576.1_g000023 Rmu_sc0007753.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00009700 Rroxscaffold_2G00130700 Rroxscaffold_4G00277550 Rroxscaffold_4G00309110 Rroxscaffold_4G00310040 |
| rosa_samantha | Rh1DG085900 Rh1DG285100 Rh4AG080900 Rh4DG098600 Rh5BG267100 Rh5DG221200 Rh5DG273700 Rh5DG512300 Rh6AG030700 Rh6BG476200 Rh6CG512300 Rh6CG523800 Rh7AG262200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 2 cut(s) | 58, 86 |
| AluI | AGCT | 2 cut(s) | 58, 86 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 98 |
| AseI | ATTAAT | 1 cut(s) | 161 |
| BfaI | CTAG | 1 cut(s) | 83 |
| BmsI | GCATC | 1 cut(s) | 145 |
| BpmI | CTGGAG | 1 cut(s) | 15 |
| BsaJI | CCNNGG | 1 cut(s) | 132 |
| BseDI | CCNNGG | 1 cut(s) | 132 |
| BslFI | GGGAC | 1 cut(s) | 162 |
| BsmFI | GGGAC | 1 cut(s) | 162 |
| BspHI | TCATGA | 1 cut(s) | 196 |
| BssECI | CCNNGG | 1 cut(s) | 132 |
| BssT1I | CCWWGG | 1 cut(s) | 132 |
| Bst4CI | ACNGT | 1 cut(s) | 100 |
| BstDEI | CTNAG | 1 cut(s) | 204 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 44 |
| CaiI | CAGNNNCTG | 1 cut(s) | 98 |
| CciI | TCATGA | 1 cut(s) | 196 |
| CviAII | CATG | 1 cut(s) | 197 |
| CviJI | RGCY | 3 cut(s) | 35, 58, 86 |
| CviKI_1 | RGCY | 3 cut(s) | 35, 58, 86 |
| DdeI | CTNAG | 1 cut(s) | 204 |
| Eco130I | CCWWGG | 1 cut(s) | 132 |
| EcoT14I | CCWWGG | 1 cut(s) | 132 |
| EcoT22I | ATGCAT | 1 cut(s) | 160 |
| ErhI | CCWWGG | 1 cut(s) | 132 |
| FaeI | CATG | 1 cut(s) | 200 |
| FaiI | YATR | 3 cut(s) | 20, 141, 198 |
| FaqI | GGGAC | 1 cut(s) | 162 |
| FatI | CATG | 1 cut(s) | 196 |
| FspBI | CTAG | 1 cut(s) | 83 |
| GsuI | CTGGAG | 1 cut(s) | 15 |
| Hin1II | CATG | 1 cut(s) | 200 |
| HinfI | GANTC | 1 cut(s) | 26 |
| Hpy188III | TCNNGA | 1 cut(s) | 197 |
| HpyCH4III | ACNGT | 1 cut(s) | 100 |
| HpyCH4V | TGCA | 2 cut(s) | 107, 158 |
| HpyF3I | CTNAG | 1 cut(s) | 204 |
| Hsp92II | CATG | 1 cut(s) | 200 |
| LpnPI | CCDG | 3 cut(s) | 45, 74, 131 |
| LweI | GCATC | 1 cut(s) | 145 |
| MaeI | CTAG | 1 cut(s) | 83 |
| MaeIII | GTNAC | 1 cut(s) | 94 |
| Mph1103I | ATGCAT | 1 cut(s) | 160 |
| MseI | TTAA | 1 cut(s) | 161 |
| NlaIII | CATG | 1 cut(s) | 200 |
| NsiI | ATGCAT | 1 cut(s) | 160 |
| PagI | TCATGA | 1 cut(s) | 196 |
| PfeI | GAWTC | 1 cut(s) | 26 |
| PshBI | ATTAAT | 1 cut(s) | 161 |
| PstNI | CAGNNNCTG | 1 cut(s) | 98 |
| SaqAI | TTAA | 1 cut(s) | 161 |
| SetI | ASST | 3 cut(s) | 60, 88, 196 |
| SfaNI | GCATC | 1 cut(s) | 145 |
| SgeI | CNNG | 9 cut(s) | 44, 56, 80, 95, 101, 145, 158, 164, 178 |
| SspMI | CTAG | 1 cut(s) | 83 |
| StyI | CCWWGG | 1 cut(s) | 132 |
| TaaI | ACNGT | 1 cut(s) | 100 |
| TfiI | GAWTC | 1 cut(s) | 26 |
| Tru1I | TTAA | 1 cut(s) | 161 |
| Tru9I | TTAA | 1 cut(s) | 161 |
| TspDTI | ATGAA | 3 cut(s) | 35, 39, 66 |
| VspI | ATTAAT | 1 cut(s) | 161 |
| XspI | CTAG | 1 cut(s) | 83 |
| Zsp2I | ATGCAT | 1 cut(s) | 160 |