Rh6CG479900

Putative serine esterase (DUF676)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0008052
Physical Location & Seq
Forward (+)
64714732 .. 64717407
2676 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG479900.1

Sequence Viewer

Length: 1236 bp
ATGGCTTCTCTGGAGTCGGAGGCCGGCTCTGTACGGACCGCCGAATCTTCCAATGAAATCAAACAGAGAGCCAGAAAAAATAGGACGGAGAAGAAGAAGACCAAAAACGGTGCGTTTCGTTACCTCCCCAAATTTCGGTGCTTTAGTTTAAAATCGGAAACGACTGACGGTCACGGGAAGGGGAGTTTCGATATGGAGGTGGAGGATGAAGCGGGTCGGGGAATCAACCCGACCCACCTTGTCATAATGGTTAATGGGCTTATAGGCAGTGCCGAGGATTGGAGGTATGCAGCGACCCAGTTTGTGAAGAGATACCCAGAAGATGTTGTTGTGCATTGCAGTGAATGTAATTGTTCAACGTTGACATTTGATGGTGTGGATGTAATGGGGGAGAGATTAGCAGAAGAGGTTAAATCTGTAATAAAACGCCACCAAAGTGTTCAGAAGATCTCGTTTGTTGGTCACTCATTAGGTGGCCTTATAGCAAGGTATGCCATTGGCAGGCTTTATGAACGCGACACAACAAGGGAACTTTCTCAGGAAAATGGAGAATGTAGGGGCAGTGGATTTGAGGATCCATCGCTGGAACAGAAAGCGAAAAGCAAAATTGCTGGGCTGGAGCCGGTGAATTTTATAACATCTGCAACTCCGCACCTCGGTTCATGGGGGCATAAACAGGTTCCAGTGTTTTGTGGCTTTCAAATCCTTGAAAAAGCAGCAGCTCGTACTTCATGGTGTTTAGGTAGAACTGGAAGACATCTGTTTTTAACTGATAGGGATAAAGGAAAACCTCCCCTTTTACTTCAGATGGTTTATGATTCTGAAGATCTTAAATTCTTATCTGCATTGAAGTCCTTCAGGCGTCATGTTGCCTATGCAAATGCTCATTATGATCACCTCGTGGGATGGAGTACATCTTCTATACGTCGTAAGAAGGAGCTGCCAAAGCTTAAACATTTATCCAGAGACAACAAATATCCACATATTGTAAATGAGGACATGATAAACACCGCTAGTACTCAAGAAGAAGTTGCTTTGGAGGATGACGTGAATATTGAGTTCGAAGAGGAAATGATCAGAGGTTTGACCAAGGTGAGCTGGGAAAGGATTGATGTAAGTTTTAGTGGAAGCAGACAAAAGTACCTTGCACATAATACCATTCAGGTGAAAACTTATTGTATACATTCTGATGGAGCTGATGTGATCCAACACATGGTGGACAATTTTCGTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF676

Protein Analysis

411

Amino Acids

46.49

Weight (kDa)

8.3

Isoelectric Point (pI)

39.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF676 PF05057 76 - 305 3.3e-65 Putative serine esterase (DUF676)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 635
AccB7I CCANNNNNTGG 1 cut(s) 1213
AccI GTMKAC 1 cut(s) 1180
AccII CGCG 1 cut(s) 516
AciI CCGC 4 cut(s) 39, 212, 650, 1011
AclI AACGTT 1 cut(s) 359
AclWI GGATC 3 cut(s) 569, 582, 1198
AcsI RAATTY 3 cut(s) 131, 628, 833
AcuI CTGAAG 3 cut(s) 788, 841, 843
AcyI GRCGYC 1 cut(s) 862
AdeI CACNNNGTG 2 cut(s) 901, 1216
AfaI GTAC 5 cut(s) 33, 727, 913, 1018, 1142
AfiI CCNNNNNNNGG 5 cut(s) 135, 279, 501, 656, 1213
AgsI TTSAA 4 cut(s) 357, 701, 710, 850
AhdI GACNNNNNGTC 1 cut(s) 168
AjiI CACGTC 1 cut(s) 1048
AleI CACNNNNGTG 1 cut(s) 435
AluBI AGCT 5 cut(s) 722, 940, 949, 1098, 1196
AluI AGCT 5 cut(s) 722, 940, 949, 1098, 1196
Alw26I GTCTC 1 cut(s) 960
AlwI GGATC 3 cut(s) 569, 582, 1198
AoxI GGCC 2 cut(s) 21, 475
ApeKI GCWGC 4 cut(s) 290, 716, 719, 940
ApoI RAATTY 3 cut(s) 131, 628, 833
Asp700I GAANNNNTTC 1 cut(s) 854
AspS9I GGNCC 1 cut(s) 36
AsuHPI GGTGA 4 cut(s) 637, 887, 1105, 1177
AsuII TTCGAA 1 cut(s) 1062
AvaII GGWCC 1 cut(s) 36
BaeI ACNNNNGTAYC 2 cut(s) 1124, 1157
BamHI GGATCC 1 cut(s) 574
BauI CACGAG 1 cut(s) 899
BbsI GAAGAC 2 cut(s) 104, 760
BbvI GCAGC 4 cut(s) 302, 728, 731, 927
BccI CCATC 5 cut(s) 365, 586, 802, 900, 1184
BclI TGATCA 2 cut(s) 892, 1074
BcoDI GTCTC 1 cut(s) 960
BfaI CTAG 1 cut(s) 1014
BglII AGATCT 2 cut(s) 447, 826
BisI GCNGC 4 cut(s) 291, 717, 720, 941
BlsI GCNGC 4 cut(s) 292, 718, 721, 942
BmcAI AGTACT 1 cut(s) 1018
Bme18I GGWCC 1 cut(s) 36
BmeRI GACNNNNNGTC 1 cut(s) 168
BmgBI CACGTC 1 cut(s) 1048
BmgT120I GGNCC 1 cut(s) 36
BmiI GGNNCC 3 cut(s) 576, 621, 681
BmrI ACTGGG 1 cut(s) 292
BmuI ACTGGG 1 cut(s) 292
BpiI GAAGAC 2 cut(s) 104, 760
BplI GAGNNNNNCTC 2 cut(s) 11, 43
BpmI CTGGAG 2 cut(s) 32, 638
Bpu14I TTCGAA 1 cut(s) 1062
BpuEI CTTGAG 1 cut(s) 1005
BsaHI GRCGYC 1 cut(s) 862
BsaJI CCNNGG 3 cut(s) 273, 655, 1089
BsaXI ACNNNNNCTCC 2 cut(s) 1185, 1215
Bsc4I CCNNNNNNNGG 5 cut(s) 135, 279, 501, 656, 1213
Bse118I RCCGGY 2 cut(s) 23, 622
Bse1I ACTGG 3 cut(s) 298, 683, 754
Bse3DI GCAATG 1 cut(s) 334
BseDI CCNNGG 3 cut(s) 273, 655, 1089
BseGI GGATG 4 cut(s) 211, 385, 911, 1048
BseLI CCNNNNNNNGG 5 cut(s) 135, 279, 501, 656, 1213
BseMI GCAATG 1 cut(s) 334
BseMII CTCAG 1 cut(s) 551
BseNI ACTGG 3 cut(s) 298, 683, 754
BseXI GCAGC 4 cut(s) 302, 728, 731, 927
BseYI CCCAGC 2 cut(s) 611, 1098
Bsh1236I CGCG 1 cut(s) 516
BshFI GGCC 2 cut(s) 23, 477
BsiSI CCGG 2 cut(s) 24, 623
BslI CCNNNNNNNGG 5 cut(s) 135, 279, 501, 656, 1213
BsmAI GTCTC 1 cut(s) 960
BsnI GGCC 2 cut(s) 23, 477
Bsp119I TTCGAA 1 cut(s) 1062
Bsp143I GATC 6 cut(s) 447, 574, 826, 892, 1074, 1203
BspACI CCGC 4 cut(s) 39, 212, 650, 1011
BspANI GGCC 2 cut(s) 23, 477
BspCNI CTCAG 1 cut(s) 550
BspFNI CGCG 1 cut(s) 516
BspLI GGNNCC 3 cut(s) 576, 621, 681
BspPI GGATC 3 cut(s) 569, 582, 1198
BspT104I TTCGAA 1 cut(s) 1062
BsrDI GCAATG 1 cut(s) 334
BsrFI RCCGGY 2 cut(s) 23, 622
BsrI ACTGG 3 cut(s) 298, 683, 754
BssAI RCCGGY 2 cut(s) 23, 622
BssECI CCNNGG 3 cut(s) 273, 655, 1089
BssMI GATC 6 cut(s) 447, 574, 826, 892, 1074, 1203
BssNAI GTATAC 1 cut(s) 1181
BssNI GRCGYC 1 cut(s) 862
BssSI CACGAG 1 cut(s) 899
BssT1I CCWWGG 1 cut(s) 1089
Bst1107I GTATAC 1 cut(s) 1181
Bst2BI CACGAG 1 cut(s) 899
Bst4CI ACNGT 2 cut(s) 110, 170
Bst6I CTCTTC 3 cut(s) 302, 399, 1059
BstACI GRCGYC 1 cut(s) 862
BstAPI GCANNNNNTGC 1 cut(s) 491
BstBI TTCGAA 1 cut(s) 1062
BstC8I GCNNGC 2 cut(s) 25, 503
BstDEI CTNAG 1 cut(s) 537
BstF5I GGATG 4 cut(s) 211, 385, 911, 1048
BstFNI CGCG 1 cut(s) 516
BstKTI GATC 6 cut(s) 450, 577, 829, 895, 1077, 1206
BstMAI GTCTC 1 cut(s) 960
BstMBI GATC 6 cut(s) 447, 574, 826, 892, 1074, 1203
BstMWI GCNNNNNNNGC 2 cut(s) 491, 946
BstUI CGCG 1 cut(s) 516
BstV1I GCAGC 4 cut(s) 302, 728, 731, 927
BstV2I GAAGAC 2 cut(s) 104, 760
BstX2I RGATCY 3 cut(s) 447, 574, 826
BstYI RGATCY 3 cut(s) 447, 574, 826
BstZ17I GTATAC 1 cut(s) 1181
BsuRI GGCC 2 cut(s) 23, 477
BtgZI GCGATG 1 cut(s) 564
BtrI CACGTC 1 cut(s) 1048
BtsCI GGATG 4 cut(s) 211, 385, 911, 1048
BtsI GCAGTG 3 cut(s) 274, 346, 568
BtsIMutI CAGTG 4 cut(s) 274, 346, 568, 690
Cac8I GCNNGC 2 cut(s) 25, 503
Cfr10I RCCGGY 2 cut(s) 23, 622
Cfr13I GGNCC 1 cut(s) 36
CpoI CGGWCCG 1 cut(s) 36
CseI GACGC 1 cut(s) 851
Csp6I GTAC 5 cut(s) 32, 726, 912, 1017, 1141
CspI CGGWCCG 1 cut(s) 36
CviAII CATG 5 cut(s) 663, 732, 866, 1000, 1213
CviQI GTAC 5 cut(s) 32, 726, 912, 1017, 1141
DdeI CTNAG 1 cut(s) 537
DpnI GATC 6 cut(s) 449, 576, 828, 894, 1076, 1205
DpnII GATC 6 cut(s) 447, 574, 826, 892, 1074, 1203
DraI TTTAAA 1 cut(s) 150
DraIII CACNNNGTG 2 cut(s) 901, 1216
DriI GACNNNNNGTC 1 cut(s) 168
Eam1104I CTCTTC 3 cut(s) 302, 399, 1059
Eam1105I GACNNNNNGTC 1 cut(s) 168
EarI CTCTTC 3 cut(s) 302, 399, 1059
Eco130I CCWWGG 1 cut(s) 1089
Eco47I GGWCC 1 cut(s) 36
Eco57I CTGAAG 3 cut(s) 788, 841, 843
EcoT14I CCWWGG 1 cut(s) 1089
ErhI CCWWGG 1 cut(s) 1089
FaeI CATG 5 cut(s) 666, 735, 869, 1003, 1216
FatI CATG 5 cut(s) 662, 731, 865, 999, 1212
FauI CCCGC 1 cut(s) 205
FbaI TGATCA 2 cut(s) 892, 1074
FblI GTMKAC 1 cut(s) 1180
Fnu4HI GCNGC 4 cut(s) 291, 717, 720, 941
FokI GGATG 4 cut(s) 218, 392, 918, 1055
Fsp4HI GCNGC 4 cut(s) 291, 717, 720, 941
FspBI CTAG 1 cut(s) 1014
GluI GCNGC 4 cut(s) 291, 717, 720, 941
GsaI CCCAGC 2 cut(s) 615, 1102
GsuI CTGGAG 2 cut(s) 32, 638
HaeIII GGCC 2 cut(s) 23, 477
HapII CCGG 2 cut(s) 24, 623
HgaI GACGC 1 cut(s) 851
Hin1I GRCGYC 1 cut(s) 862
Hin1II CATG 5 cut(s) 666, 735, 869, 1003, 1216
HincII GTYRAC 1 cut(s) 363
HindII GTYRAC 1 cut(s) 363
HindIII AAGCTT 1 cut(s) 947
HinfI GANTC 4 cut(s) 14, 44, 222, 818
HpaII CCGG 2 cut(s) 24, 623
HphI GGTGA 4 cut(s) 637, 887, 1105, 1177
Hpy166II GTNNAC 3 cut(s) 363, 1181, 1219
Hpy188I TCNGA 7 cut(s) 19, 157, 444, 807, 823, 1079, 1189
Hpy188III TCNNGA 4 cut(s) 11, 539, 963, 1022
Hpy8I GTNNAC 3 cut(s) 363, 1181, 1219
Hpy99I CGWCG 1 cut(s) 930
HpyAV CCTTC 3 cut(s) 172, 865, 928
HpyCH4III ACNGT 2 cut(s) 110, 170
HpyCH4IV ACGT 3 cut(s) 359, 925, 1047
HpyCH4V TGCA 7 cut(s) 290, 334, 339, 644, 845, 878, 1148
HpyF10VI GCNNNNNNNGC 2 cut(s) 491, 946
HpyF3I CTNAG 1 cut(s) 537
HpySE526I ACGT 3 cut(s) 359, 925, 1047
Hsp92I GRCGYC 1 cut(s) 862
Hsp92II CATG 5 cut(s) 666, 735, 869, 1003, 1216
KroI GCCGGC 1 cut(s) 23
KroNI GCCGGC 1 cut(s) 25
Ksp22I TGATCA 2 cut(s) 892, 1074
Kzo9I GATC 6 cut(s) 447, 574, 826, 892, 1074, 1203
LmnI GCTCC 3 cut(s) 619, 937, 1193
Lsp1109I GCAGC 4 cut(s) 302, 728, 731, 927
MaeI CTAG 1 cut(s) 1014
MaeII ACGT 3 cut(s) 359, 925, 1047
MaeIII GTNAC 3 cut(s) 119, 170, 461
MalI GATC 6 cut(s) 449, 576, 828, 894, 1076, 1205
MboI GATC 6 cut(s) 447, 574, 826, 892, 1074, 1203
MflI RGATCY 3 cut(s) 447, 574, 826
MluCI AATT 6 cut(s) 131, 349, 606, 628, 833, 1222
MlyI GAGTC 1 cut(s) 23
MmeI TCCRAC 1 cut(s) 1231
MroNI GCCGGC 1 cut(s) 23
MroXI GAANNNNTTC 1 cut(s) 854
MseI TTAA 6 cut(s) 149, 252, 411, 767, 831, 951
MslI CAYNNNNRTG 4 cut(s) 339, 435, 1163, 1188
MspI CCGG 2 cut(s) 24, 623
MvnI CGCG 1 cut(s) 516
MwoI GCNNNNNNNGC 2 cut(s) 491, 946
NaeI GCCGGC 1 cut(s) 25
NdeII GATC 6 cut(s) 447, 574, 826, 892, 1074, 1203
NgoMIV GCCGGC 1 cut(s) 23
NlaIII CATG 5 cut(s) 666, 735, 869, 1003, 1216
NlaIV GGNNCC 3 cut(s) 576, 621, 681
NmeAIII GCCGAG 1 cut(s) 298
NmuCI GTSAC 2 cut(s) 170, 461
NspV TTCGAA 1 cut(s) 1062
OliI CACNNNNGTG 1 cut(s) 435
PdiI GCCGGC 1 cut(s) 25
PdmI GAANNNNTTC 1 cut(s) 854
PfeI GAWTC 3 cut(s) 44, 222, 818
PflMI CCANNNNNTGG 1 cut(s) 1213
PkrI GCNGC 4 cut(s) 292, 718, 721, 942
PleI GAGTC 1 cut(s) 22
PpsI GAGTC 1 cut(s) 22
PsiI TTATAA 1 cut(s) 635
Psp1406I AACGTT 1 cut(s) 359
PspFI CCCAGC 2 cut(s) 611, 1098
PspN4I GGNNCC 3 cut(s) 576, 621, 681
PspPI GGNCC 1 cut(s) 36
PsuI RGATCY 3 cut(s) 447, 574, 826
RsaI GTAC 5 cut(s) 33, 727, 913, 1018, 1142
RsaNI GTAC 5 cut(s) 32, 726, 912, 1017, 1141
RseI CAYNNNNRTG 4 cut(s) 339, 435, 1163, 1188
Rsr2I CGGWCCG 1 cut(s) 36
RsrII CGGWCCG 1 cut(s) 36
SaqAI TTAA 6 cut(s) 149, 252, 411, 767, 831, 951
SatI GCNGC 4 cut(s) 291, 717, 720, 941
Sau3AI GATC 6 cut(s) 447, 574, 826, 892, 1074, 1203
Sau96I GGNCC 1 cut(s) 36
ScaI AGTACT 1 cut(s) 1018
SchI GAGTC 1 cut(s) 23
SfuI TTCGAA 1 cut(s) 1062
SinI GGWCC 1 cut(s) 36
SmiMI CAYNNNNRTG 4 cut(s) 339, 435, 1163, 1188
SmlI CTYRAG 1 cut(s) 1020
SmoI CTYRAG 1 cut(s) 1020
Sse9I AATT 6 cut(s) 131, 349, 606, 628, 833, 1222
SsiI CCGC 4 cut(s) 39, 212, 650, 1011
SspI AATATT 1 cut(s) 1054
SspMI CTAG 1 cut(s) 1014
StyI CCWWGG 1 cut(s) 1089
TaaI ACNGT 2 cut(s) 110, 170
TaiI ACGT 3 cut(s) 362, 928, 1050
TaqI TCGA 2 cut(s) 189, 1062
TasI AATT 6 cut(s) 131, 349, 606, 628, 833, 1222
TatI WGTACW 2 cut(s) 911, 1016
TfiI GAWTC 3 cut(s) 44, 222, 818
Tru1I TTAA 6 cut(s) 149, 252, 411, 767, 831, 951
Tru9I TTAA 6 cut(s) 149, 252, 411, 767, 831, 951
TscAI CASTG 4 cut(s) 274, 346, 568, 690
TseFI GTSAC 2 cut(s) 170, 461
TseI GCWGC 4 cut(s) 290, 716, 719, 940
Tsp45I GTSAC 2 cut(s) 170, 461
TspDTI ATGAA 5 cut(s) 69, 222, 525, 651, 720
TspGWI ACGGA 2 cut(s) 49, 101
TspRI CASTG 4 cut(s) 274, 346, 568, 690
Van91I CCANNNNNTGG 1 cut(s) 1213
VpaK11BI GGWCC 1 cut(s) 36
XapI RAATTY 3 cut(s) 131, 628, 833
XmiI GTMKAC 1 cut(s) 1180
XmnI GAANNNNTTC 1 cut(s) 854
XspI CTAG 1 cut(s) 1014
ZrmI AGTACT 1 cut(s) 1018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.