Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0004417

Physical Location & Seq

Genomic Coordinates Reverse (-)

43278972 .. 43281750

Gene Structure 2779 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG246000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGACACCTGAGAAGAAAATGGAGCTCCTCCTCCATCTCTGCCTATTCTCTCTTCTCCTACTCTCATCAAAACCCATCTCTGCAGAAGAAGAAGAAGACTCATCACCCATAATCTCAAGGTTCCAAAAATACCTCCAAATCAACACGGCCCATCCTAAGCCCCTGTACCAGGAAGCAGCCGATTTCATCCTCTCCGAGGCCAGCTCCCTCTCCCTCGATTCCCAGACCCTCGAGTTCGTCCCCGGCAAGCCCCTCCTCCTCCTCAAATGGCCCGGCTCCGACCCTTCTCTCCCCTCCATCCTCCTCAACTCCCACACCGACGTCGTCCCGGCCGAGCACGACAAGTGGGCCCACCATCCCTTCTCGGCCCACGTCGACCCGAGTGGGAAAATCTACGCCAGAGGCTCCCAGGACATGAAGTGCGTCGGGCTTCAGTACCTGGAGGCCATTCGACGGCTTAAGGCTTCTGGGTTTAAGCCCACTCGGACTGTTTACTTGTCTTTCGTTCCTGATGAGGAGATTGGTGGTCATGATGGCGCTGAGAAGTTTGCTGAATCTGATGTTTTCAAAGCCTTGAACGTTGGGATTGTTCTCGATGAAGGGTTGGCCTCGCCGAGCGAGCATTACAGGGCTTTCTATGCGGAGAGGTGCCCATGGTGGCTGATCATCAAGGCTACTGGGGCTCCTGGTCATGGGGCTAAGCTGTATGACAATACTGCTATGGAGAATATATTGAAGAGCATTGAGAGTGTGAGGAGGTTTCGTGCTTCGCAGTTTGATTTGGTGAAGGCGGGTTTGAAGGCTGAAGGGGAGGTTGTCTCGGTCAATATGGCATTTTTGAAGGCTGGCACACCCAGTCCAACTGGTTTTGTCATGAATTTGCAGCCATCTGAAGCAGAAGCTGGGTTTGATATTAGGGTCCCCCCAACCGCTGATCAGGAGTCTTTGGAGAAACGGATTGCTGAAGAATGGGCGCCTTCTTCACGGAACATGACATTTAGGCTTGGGCAGTTCAAGCAGAAGGTTTCTGTGCTTGATAAATCTGGGAGGCCAGTCCTTACAGCAACTGACAGTTCAAACCCCTGGTGGGCCCTGCTAGAAGAAGCGGTCAAAAAAGCTAATGGAAAACTTGGTAAACCTGAGATTTTTCCTGCTTCAACAGATGCTCGCTATTTCCGGCTACAAGGCTTGCCAGCAATTGGATTCTCTCCTATGGCTAACACTCCTATTCTGCTCCATGACCATAACGAGTTTCTAAACAAAGATGAATACTTGAAAGGAATCAAGATTTATGAATCCATTATCAAATCTTATTCATCTTATGCTGAGCATGTGCCGGCGGGCTTGAGAGATGAGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004046 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005615 GO:0016787 GO:0016810 GO:0016811 GO:0031982 GO:0042802 GO:0043226 GO:0043227 GO:0043230 GO:0044421 GO:0070062 GO:1903561

KEGG Pathways

Metabolic & Signaling

ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

M20_dimer Peptidase_M20

Protein Analysis

453

Amino Acids

50.27

Weight (kDa)

5.95

Isoelectric Point (pI)

45.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M20	PF01546	101 - 436	8.4e-39	Peptidase family M20/M25/M40

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38220 AT4G38220
fragaria_vesca	FvH4_2g16990
malus_domestica	MD05G1143000.v1.1 MD10G1142800.v1.1 MD15G1413100.v1.1
prunus_persica	Prupe.8G181800_v2.0.a1 Prupe.8G181800_v2.0.a1
pyrus_communis	pycom05g13750 pycom10g12270
rosa_chinensis	RchiOBHm_Chr2g0126171 RchiOBHm_Chr6g0281181
rosa_laevigata	RLG00000012987
rosa_multiflora	Rmu_co8196198.1_g000001 Rmu_co8363365.1_g000001 Rmu_sc0001705.1_g000022 Rmu_sc0012209.1_g000001 Rmu_sc0026953.1_g000001 Rmu_sc0034918.1_g000001 Rmu_sc0035650.1_g000001
rosa_rugosa	Rorug06G0139500 Rorug06G0139500
rosa_samantha	Rh2BG327100 Rh6AG251300 Rh6BG182200 Rh6BG254500 Rh6CG253900 Rh6DG246000
rosa_wichuraiana	Rw2G031780 Rw3G017710 Rw6G021830 Rw7G031480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	324
AccB1I	GGYRCC	2 cut(s)	648, 973
AccB7I	CCANNNNNTGG	1 cut(s)	1199
AccI	GTMKAC	1 cut(s)	375
AciI	CCGC	5 cut(s)	641, 791, 930, 1106, 1340
AclI	AACGTT	1 cut(s)	579
AcoI	YGGCCR	1 cut(s)	330
AcsI	RAATTY	1 cut(s)	877
AcuI	CTGAAG	4 cut(s)	416, 825, 912, 984
AcyI	GRCGYC	2 cut(s)	321, 974
AfaI	GTAC	2 cut(s)	167, 437
AfiI	CCNNNNNNNGG	6 cut(s)	169, 196, 453, 692, 1087, 1199
AflII	CTTAAG	1 cut(s)	458
AgsI	TTSAA	9 cut(s)	568, 577, 736, 799, 841, 1015, 1077, 1158, 1276
AjiI	CACGTC	1 cut(s)	373
AjnI	CCWGG	5 cut(s)	168, 408, 438, 685, 1082
AluBI	AGCT	5 cut(s)	25, 204, 703, 902, 1118
AluI	AGCT	5 cut(s)	25, 204, 703, 902, 1118
Alw21I	GWGCWC	2 cut(s)	27, 339
Alw26I	GTCTC	1 cut(s)	823
AlwNI	CAGNNNCTG	3 cut(s)	439, 902, 1067
Ama87I	CYCGRG	2 cut(s)	230, 379
ApaI	GGGCCC	2 cut(s)	352, 1093
ApeKI	GCWGC	2 cut(s)	176, 883
ApoI	RAATTY	1 cut(s)	877
AspLEI	GCGC	2 cut(s)	539, 976
AspS9I	GGNCC	8 cut(s)	148, 270, 348, 349, 367, 919, 1089, 1090
AsuC2I	CCSGG	3 cut(s)	243, 273, 329
AsuHPI	GGTGA	2 cut(s)	96, 796
AvaI	CYCGRG	2 cut(s)	230, 379
AvaII	GGWCC	1 cut(s)	919
BaeGI	GKGCMC	3 cut(s)	352, 653, 1093
BanI	GGYRCC	2 cut(s)	648, 973
BanII	GRGCYC	4 cut(s)	27, 352, 685, 1093
BbsI	GAAGAC	1 cut(s)	102
Bbv12I	GWGCWC	2 cut(s)	27, 339
BbvI	GCAGC	2 cut(s)	188, 895
BccI	CCATC	7 cut(s)	42, 83, 159, 305, 363, 527, 895
BceAI	ACGGC	2 cut(s)	162, 470
BciT130I	CCWGG	5 cut(s)	170, 410, 440, 687, 1084
BclI	TGATCA	2 cut(s)	663, 934
BcnI	CCSGG	3 cut(s)	243, 273, 329
BcoDI	GTCTC	1 cut(s)	823
BfaI	CTAG	1 cut(s)	1097
BfmI	CTRYAG	1 cut(s)	81
BfoI	RGCGCY	2 cut(s)	540, 977
BfrI	CTTAAG	1 cut(s)	458
BisI	GCNGC	2 cut(s)	177, 884
BlpI	GCTNAGC	2 cut(s)	699, 1326
BlsI	GCNGC	2 cut(s)	178, 885
Bme1390I	CCNGG	8 cut(s)	170, 243, 273, 329, 410, 440, 687, 1084
Bme18I	GGWCC	1 cut(s)	919
BmeT110I	CYCGRG	2 cut(s)	230, 379
BmgBI	CACGTC	1 cut(s)	373
BmgT120I	GGNCC	8 cut(s)	148, 270, 348, 349, 367, 919, 1089, 1090
BmrFI	CCNGG	8 cut(s)	170, 243, 273, 329, 410, 440, 687, 1084
BmrI	ACTGGG	2 cut(s)	687, 849
BmsI	GCATC	1 cut(s)	1153
BmuI	ACTGGG	2 cut(s)	687, 849
BpiI	GAAGAC	1 cut(s)	102
BplI	GAGNNNNNCTC	4 cut(s)	188, 220, 803, 835
BpmI	CTGGAG	1 cut(s)	461
Bpu10I	CCTNAGC	1 cut(s)	156
Bpu1102I	GCTNAGC	2 cut(s)	699, 1326
BpuEI	CTTGAG	1 cut(s)	100
BpuMI	CCSGG	3 cut(s)	243, 273, 329
BsaHI	GRCGYC	2 cut(s)	321, 974
BsaJI	CCNNGG	5 cut(s)	195, 241, 408, 653, 1082
BsaXI	ACNNNNNCTCC	4 cut(s)	667, 697, 748, 778
Bsc4I	CCNNNNNNNGG	6 cut(s)	169, 196, 453, 692, 1087, 1199
Bse118I	RCCGGY	1 cut(s)	1336
Bse1I	ACTGG	4 cut(s)	682, 855, 868, 1052
BseBI	CCWGG	5 cut(s)	170, 410, 440, 687, 1084
BseDI	CCNNGG	5 cut(s)	195, 241, 408, 653, 1082
BseGI	GGATG	4 cut(s)	151, 186, 297, 355
BseLI	CCNNNNNNNGG	6 cut(s)	169, 196, 453, 692, 1087, 1199
BseMII	CTCAG	3 cut(s)	531, 1131, 1317
BseNI	ACTGG	4 cut(s)	682, 855, 868, 1052
BseRI	GAGGAG	8 cut(s)	17, 20, 245, 248, 251, 293, 530, 769
BseSI	GKGCMC	3 cut(s)	352, 653, 1093
BseX3I	CGGCCG	1 cut(s)	330
BseXI	GCAGC	2 cut(s)	188, 895
BseYI	CCCAGC	1 cut(s)	902
Bsh1285I	CGRYCG	1 cut(s)	333
BshNI	GGYRCC	2 cut(s)	648, 973
BsiEI	CGRYCG	1 cut(s)	333
BsiHKAI	GWGCWC	2 cut(s)	27, 339
BsiHKCI	CYCGRG	2 cut(s)	230, 379
BsiSI	CCGG	5 cut(s)	243, 273, 329, 1177, 1337
BslFI	GGGAC	3 cut(s)	224, 311, 905
BslI	CCNNNNNNNGG	6 cut(s)	169, 196, 453, 692, 1087, 1199
BsmAI	GTCTC	1 cut(s)	823
BsmFI	GGGAC	3 cut(s)	224, 311, 905
BsoBI	CYCGRG	2 cut(s)	230, 379
Bsp120I	GGGCCC	2 cut(s)	348, 1089
Bsp1286I	GDGCHC	6 cut(s)	27, 339, 352, 653, 685, 1093
Bsp143I	GATC	2 cut(s)	663, 934
Bsp1720I	GCTNAGC	2 cut(s)	699, 1326
Bsp19I	CCATGG	1 cut(s)	653
BspACI	CCGC	5 cut(s)	641, 791, 930, 1106, 1340
BspCNI	CTCAG	3 cut(s)	532, 1132, 1318
BspHI	TCATGA	2 cut(s)	529, 873
BspMAI	CTGCAG	1 cut(s)	85
BspQI	GCTCTTC	1 cut(s)	731
BspT107I	GGYRCC	2 cut(s)	648, 973
BspTI	CTTAAG	1 cut(s)	458
BsrFI	RCCGGY	1 cut(s)	1336
BsrI	ACTGG	4 cut(s)	682, 855, 868, 1052
BssAI	RCCGGY	1 cut(s)	1336
BssECI	CCNNGG	5 cut(s)	195, 241, 408, 653, 1082
BssMI	GATC	2 cut(s)	663, 934
BssNI	GRCGYC	2 cut(s)	321, 974
BssT1I	CCWWGG	1 cut(s)	653
Bst2UI	CCWGG	5 cut(s)	170, 410, 440, 687, 1084
Bst4CI	ACNGT	2 cut(s)	490, 1073
Bst6I	CTCTTC	2 cut(s)	57, 731
BstACI	GRCGYC	2 cut(s)	321, 974
BstAFI	CTTAAG	1 cut(s)	458
BstC8I	GCNNGC	9 cut(s)	202, 248, 620, 847, 1168, 1190, 1194, 1338, 1342
BstDEI	CTNAG	6 cut(s)	9, 156, 540, 699, 1140, 1326
BstDSI	CCRYGG	1 cut(s)	653
BstENI	CCTNNNNNAGG	2 cut(s)	167, 194
BstF5I	GGATG	4 cut(s)	151, 186, 297, 355
BstH2I	RGCGCY	2 cut(s)	540, 977
BstHHI	GCGC	2 cut(s)	539, 976
BstKTI	GATC	2 cut(s)	666, 937
BstMAI	GTCTC	1 cut(s)	823
BstMBI	GATC	2 cut(s)	663, 934
BstMCI	CGRYCG	1 cut(s)	333
BstMWI	GCNNNNNNNGC	4 cut(s)	619, 638, 680, 1015
BstNI	CCWGG	5 cut(s)	170, 410, 440, 687, 1084
BstNSI	RCATGY	1 cut(s)	1334
BstSCI	CCNGG	8 cut(s)	168, 241, 271, 327, 408, 438, 685, 1082
BstSFI	CTRYAG	1 cut(s)	81
BstSLI	GKGCMC	3 cut(s)	352, 653, 1093
BstV1I	GCAGC	2 cut(s)	188, 895
BstV2I	GAAGAC	1 cut(s)	102
BstZI	CGGCCG	1 cut(s)	330
BtgI	CCRYGG	1 cut(s)	653
BtrI	CACGTC	1 cut(s)	373
BtsCI	GGATG	4 cut(s)	151, 186, 297, 355
Cac8I	GCNNGC	9 cut(s)	202, 248, 620, 847, 1168, 1190, 1194, 1338, 1342
CaiI	CAGNNNCTG	3 cut(s)	439, 902, 1067
CciI	TCATGA	2 cut(s)	529, 873
CfoI	GCGC	2 cut(s)	539, 976
Cfr10I	RCCGGY	1 cut(s)	1336
Cfr13I	GGNCC	8 cut(s)	148, 270, 348, 349, 367, 919, 1089, 1090
CseI	GACGC	1 cut(s)	412
Csp6I	GTAC	2 cut(s)	166, 436
CviAII	CATG	8 cut(s)	415, 530, 654, 692, 874, 991, 1238, 1331
CviQI	GTAC	2 cut(s)	166, 436
DdeI	CTNAG	6 cut(s)	9, 156, 540, 699, 1140, 1326
DinI	GGCGCC	1 cut(s)	975
DpnI	GATC	2 cut(s)	665, 936
DpnII	GATC	2 cut(s)	663, 934
EaeI	YGGCCR	1 cut(s)	330
EagI	CGGCCG	1 cut(s)	330
Eam1104I	CTCTTC	2 cut(s)	57, 731
EarI	CTCTTC	2 cut(s)	57, 731
Ecl136II	GAGCTC	1 cut(s)	25
EclXI	CGGCCG	1 cut(s)	330
Eco130I	CCWWGG	1 cut(s)	653
Eco24I	GRGCYC	4 cut(s)	27, 352, 685, 1093
Eco47I	GGWCC	1 cut(s)	919
Eco52I	CGGCCG	1 cut(s)	330
Eco53kI	GAGCTC	1 cut(s)	25
Eco57I	CTGAAG	4 cut(s)	416, 825, 912, 984
Eco88I	CYCGRG	2 cut(s)	230, 379
EcoICRI	GAGCTC	1 cut(s)	25
EcoNI	CCTNNNNNAGG	2 cut(s)	167, 194
EcoO109I	RGGNCCY	2 cut(s)	919, 1090
EcoRII	CCWGG	5 cut(s)	168, 408, 438, 685, 1082
EcoT14I	CCWWGG	1 cut(s)	653
EcoT38I	GRGCYC	4 cut(s)	27, 352, 685, 1093
EgeI	GGCGCC	1 cut(s)	975
EheI	GGCGCC	1 cut(s)	975
ErhI	CCWWGG	1 cut(s)	653
FaeI	CATG	8 cut(s)	418, 533, 657, 695, 877, 994, 1241, 1334
FaqI	GGGAC	3 cut(s)	224, 311, 905
FatI	CATG	8 cut(s)	414, 529, 653, 691, 873, 990, 1237, 1330
FauI	CCCGC	2 cut(s)	784, 1333
FbaI	TGATCA	2 cut(s)	663, 934
FblI	GTMKAC	1 cut(s)	375
Fnu4HI	GCNGC	2 cut(s)	177, 884
FokI	GGATG	4 cut(s)	138, 173, 284, 342
FriOI	GRGCYC	4 cut(s)	27, 352, 685, 1093
Fsp4HI	GCNGC	2 cut(s)	177, 884
FspBI	CTAG	1 cut(s)	1097
GlaI	GCGC	2 cut(s)	538, 975
GluI	GCNGC	2 cut(s)	177, 884
GsaI	CCCAGC	1 cut(s)	906
GsuI	CTGGAG	1 cut(s)	461
HaeII	RGCGCY	2 cut(s)	540, 977
HapII	CCGG	5 cut(s)	243, 273, 329, 1177, 1337
HgaI	GACGC	1 cut(s)	412
HhaI	GCGC	2 cut(s)	539, 976
Hin1I	GRCGYC	2 cut(s)	321, 974
Hin1II	CATG	8 cut(s)	418, 533, 657, 695, 877, 994, 1241, 1334
Hin6I	GCGC	2 cut(s)	537, 974
HinP1I	GCGC	2 cut(s)	537, 974
HincII	GTYRAC	1 cut(s)	376
HindII	GTYRAC	1 cut(s)	376
HinfI	GANTC	7 cut(s)	98, 218, 554, 941, 1203, 1281, 1295
HpaII	CCGG	5 cut(s)	243, 273, 329, 1177, 1337
HphI	GGTGA	2 cut(s)	96, 796
Hpy166II	GTNNAC	3 cut(s)	376, 493, 1136
Hpy188I	TCNGA	5 cut(s)	196, 280, 486, 559, 892
Hpy188III	TCNNGA	6 cut(s)	509, 530, 593, 874, 938, 1285
Hpy8I	GTNNAC	3 cut(s)	376, 493, 1136
Hpy99I	CGWCG	5 cut(s)	323, 326, 377, 428, 456
HpyAV	CCTTC	9 cut(s)	294, 370, 593, 781, 793, 800, 835, 987, 1015
HpyCH4III	ACNGT	2 cut(s)	490, 1073
HpyCH4IV	ACGT	3 cut(s)	321, 372, 579
HpyCH4V	TGCA	2 cut(s)	83, 883
HpyF10VI	GCNNNNNNNGC	4 cut(s)	619, 638, 680, 1015
HpyF3I	CTNAG	6 cut(s)	9, 156, 540, 699, 1140, 1326
HpySE526I	ACGT	3 cut(s)	321, 372, 579
Hsp92I	GRCGYC	2 cut(s)	321, 974
Hsp92II	CATG	8 cut(s)	418, 533, 657, 695, 877, 994, 1241, 1334
HspAI	GCGC	2 cut(s)	537, 974
KasI	GGCGCC	1 cut(s)	973
KflI	GGGWCCC	1 cut(s)	919
KroI	GCCGGC	1 cut(s)	1336
KroNI	GCCGGC	1 cut(s)	1338
Ksp22I	TGATCA	2 cut(s)	663, 934
Kzo9I	GATC	2 cut(s)	663, 934
LguI	GCTCTTC	1 cut(s)	731
LmnI	GCTCC	7 cut(s)	22, 30, 209, 281, 410, 688, 1239
Lsp1109I	GCAGC	2 cut(s)	188, 895
LweI	GCATC	1 cut(s)	1153
MaeI	CTAG	1 cut(s)	1097
MaeII	ACGT	3 cut(s)	321, 372, 579
MalI	GATC	2 cut(s)	665, 936
MboI	GATC	2 cut(s)	663, 934
MfeI	CAATTG	1 cut(s)	1197
MhlI	GDGCHC	6 cut(s)	27, 339, 352, 653, 685, 1093
MluCI	AATT	2 cut(s)	877, 1197
Mly113I	GGCGCC	1 cut(s)	974
MlyI	GAGTC	2 cut(s)	92, 950
MmeI	TCCRAC	2 cut(s)	303, 884
MroNI	GCCGGC	1 cut(s)	1336
MseI	TTAA	2 cut(s)	459, 474
MspA1I	CMGCKG	1 cut(s)	932
MspCI	CTTAAG	1 cut(s)	458
MspI	CCGG	5 cut(s)	243, 273, 329, 1177, 1337
MspR9I	CCNGG	8 cut(s)	170, 243, 273, 329, 410, 440, 687, 1084
MunI	CAATTG	1 cut(s)	1197
MvaI	CCWGG	5 cut(s)	170, 410, 440, 687, 1084
MwoI	GCNNNNNNNGC	4 cut(s)	619, 638, 680, 1015
NaeI	GCCGGC	1 cut(s)	1338
NarI	GGCGCC	1 cut(s)	974
NciI	CCSGG	3 cut(s)	243, 273, 329
NcoI	CCATGG	1 cut(s)	653
NdeII	GATC	2 cut(s)	663, 934
NgoMIV	GCCGGC	1 cut(s)	1336
NlaIII	CATG	8 cut(s)	418, 533, 657, 695, 877, 994, 1241, 1334
NmeAIII	GCCGAG	3 cut(s)	344, 358, 639
NspI	RCATGY	1 cut(s)	1334
PaeR7I	CTCGAG	1 cut(s)	230
PagI	TCATGA	2 cut(s)	529, 873
PciSI	GCTCTTC	1 cut(s)	731
PcsI	WCGNNNNNNNCGW	1 cut(s)	330
PdiI	GCCGGC	1 cut(s)	1338
PfeI	GAWTC	5 cut(s)	218, 554, 1203, 1281, 1295
PflFI	GACNNNGTC	1 cut(s)	323
PflMI	CCANNNNNTGG	1 cut(s)	1199
PkrI	GCNGC	2 cut(s)	178, 885
PleI	GAGTC	2 cut(s)	92, 949
PluTI	GGCGCC	1 cut(s)	977
PpsI	GAGTC	2 cut(s)	92, 949
PpuMI	RGGWCCY	1 cut(s)	919
Psp124BI	GAGCTC	1 cut(s)	27
Psp1406I	AACGTT	1 cut(s)	579
Psp5II	RGGWCCY	1 cut(s)	919
Psp6I	CCWGG	5 cut(s)	168, 408, 438, 685, 1082
PspFI	CCCAGC	1 cut(s)	902
PspGI	CCWGG	5 cut(s)	168, 408, 438, 685, 1082
PspOMI	GGGCCC	2 cut(s)	348, 1089
PspPI	GGNCC	8 cut(s)	148, 270, 348, 349, 367, 919, 1089, 1090
PspPPI	RGGWCCY	1 cut(s)	919
PspXI	VCTCGAGB	1 cut(s)	230
PstI	CTGCAG	1 cut(s)	85
PstNI	CAGNNNCTG	3 cut(s)	439, 902, 1067
PsyI	GACNNNGTC	1 cut(s)	323
RsaI	GTAC	2 cut(s)	167, 437
RsaNI	GTAC	2 cut(s)	166, 436
SacI	GAGCTC	1 cut(s)	27
SalI	GTCGAC	1 cut(s)	374
SapI	GCTCTTC	1 cut(s)	731
SaqAI	TTAA	2 cut(s)	459, 474
SatI	GCNGC	2 cut(s)	177, 884
Sau3AI	GATC	2 cut(s)	663, 934
Sau96I	GGNCC	8 cut(s)	148, 270, 348, 349, 367, 919, 1089, 1090
SchI	GAGTC	2 cut(s)	92, 950
ScrFI	CCNGG	8 cut(s)	170, 243, 273, 329, 410, 440, 687, 1084
SduI	GDGCHC	6 cut(s)	27, 339, 352, 653, 685, 1093
SfaNI	GCATC	1 cut(s)	1153
SfcI	CTRYAG	1 cut(s)	81
SfoI	GGCGCC	1 cut(s)	975
Sfr274I	CTCGAG	1 cut(s)	230
SinI	GGWCC	1 cut(s)	919
SlaI	CTCGAG	1 cut(s)	230
SmlI	CTYRAG	4 cut(s)	115, 230, 458, 1345
SmoI	CTYRAG	4 cut(s)	115, 230, 458, 1345
Sse9I	AATT	2 cut(s)	877, 1197
SsiI	CCGC	5 cut(s)	641, 791, 930, 1106, 1340
SspDI	GGCGCC	1 cut(s)	973
SspMI	CTAG	1 cut(s)	1097
SstI	GAGCTC	1 cut(s)	27
StyD4I	CCNGG	8 cut(s)	168, 241, 271, 327, 408, 438, 685, 1082
StyI	CCWWGG	1 cut(s)	653
TaaI	ACNGT	2 cut(s)	490, 1073
TaiI	ACGT	3 cut(s)	324, 375, 582
TaqI	TCGA	5 cut(s)	216, 231, 375, 451, 594
TaqII	GACCGA	1 cut(s)	811
TasI	AATT	2 cut(s)	877, 1197
TfiI	GAWTC	5 cut(s)	218, 554, 1203, 1281, 1295
Tru1I	TTAA	2 cut(s)	459, 474
Tru9I	TTAA	2 cut(s)	459, 474
TseI	GCWGC	2 cut(s)	176, 883
TspDTI	ATGAA	7 cut(s)	175, 431, 612, 890, 1281, 1305, 1308
TspGWI	ACGGA	2 cut(s)	970, 1000
Tth111I	GACNNNGTC	1 cut(s)	323
Van91I	CCANNNNNTGG	1 cut(s)	1199
Vha464I	CTTAAG	1 cut(s)	458
VpaK11BI	GGWCC	1 cut(s)	919
XagI	CCTNNNNNAGG	2 cut(s)	167, 194
XapI	RAATTY	1 cut(s)	877
XceI	RCATGY	1 cut(s)	1334
XhoI	CTCGAG	1 cut(s)	230
XmiI	GTMKAC	1 cut(s)	375
XspI	CTAG	1 cut(s)	1097
ZraI	GACGTC	1 cut(s)	322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.