Rh7AG186100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
16512848 .. 16513027
180 bp
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UTR
Exon/CDS
Intron
Rh7AG186100.1

Sequence Viewer

Length: 180 bp
ATGGCCGTCCAACTTCCTCAAGATCATGCTTTCAGAGCTCAAAATACAAAGAGGAATAGCTCTGCCTCTGGTGGTTATGAACTTGACATGGTTTGCCAAAATAGCCATCACAACAGCTTTTCTGGGAAGACTCGGAGAGCTTCAACTGGCTGGTGGCACACTTGGTTTCACTTTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

59

Amino Acids

6.86

Weight (kDa)

10.27

Isoelectric Point (pI)

40.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 3
AgsI TTSAA 1 cut(s) 144
AluBI AGCT 4 cut(s) 38, 60, 117, 140
AluI AGCT 4 cut(s) 38, 60, 117, 140
Alw21I GWGCWC 1 cut(s) 40
AoxI GGCC 1 cut(s) 3
BanII GRGCYC 1 cut(s) 40
BbsI GAAGAC 1 cut(s) 134
Bbv12I GWGCWC 1 cut(s) 40
BccI CCATC 1 cut(s) 114
BpiI GAAGAC 1 cut(s) 134
Bse1I ACTGG 1 cut(s) 151
BseNI ACTGG 1 cut(s) 151
BshFI GGCC 1 cut(s) 5
BsiHKAI GWGCWC 1 cut(s) 40
BsnI GGCC 1 cut(s) 5
Bsp1286I GDGCHC 1 cut(s) 40
Bsp143I GATC 1 cut(s) 22
BspANI GGCC 1 cut(s) 5
BsrI ACTGG 1 cut(s) 151
BssMI GATC 1 cut(s) 22
BstKTI GATC 1 cut(s) 25
BstMBI GATC 1 cut(s) 22
BstMWI GCNNNNNNNGC 2 cut(s) 35, 102
BstV2I GAAGAC 1 cut(s) 134
BsuRI GGCC 1 cut(s) 5
CviAII CATG 2 cut(s) 26, 88
CviJI RGCY 7 cut(s) 5, 38, 60, 105, 117, 140, 150
CviKI_1 RGCY 7 cut(s) 5, 38, 60, 105, 117, 140, 150
DpnI GATC 1 cut(s) 24
DpnII GATC 1 cut(s) 22
EaeI YGGCCR 1 cut(s) 3
Ecl136II GAGCTC 1 cut(s) 38
Eco24I GRGCYC 1 cut(s) 40
Eco53kI GAGCTC 1 cut(s) 38
EcoICRI GAGCTC 1 cut(s) 38
EcoT38I GRGCYC 1 cut(s) 40
FaeI CATG 2 cut(s) 29, 91
FaiI YATR 3 cut(s) 27, 78, 89
FatI CATG 2 cut(s) 25, 87
FriOI GRGCYC 1 cut(s) 40
HaeIII GGCC 1 cut(s) 5
Hin1II CATG 2 cut(s) 29, 91
HinfI GANTC 1 cut(s) 130
Hpy188I TCNGA 2 cut(s) 35, 135
Hpy188III TCNNGA 1 cut(s) 20
HpyF10VI GCNNNNNNNGC 2 cut(s) 35, 102
Hsp92II CATG 2 cut(s) 29, 91
Kzo9I GATC 1 cut(s) 22
LpnPI CCDG 4 cut(s) 54, 108, 132, 136
MalI GATC 1 cut(s) 24
MboI GATC 1 cut(s) 22
MboII GAAGA 1 cut(s) 139
MhlI GDGCHC 1 cut(s) 40
MlyI GAGTC 1 cut(s) 124
MmeI TCCRAC 1 cut(s) 34
MnlI CCTC 3 cut(s) 27, 45, 76
MwoI GCNNNNNNNGC 2 cut(s) 35, 102
NdeII GATC 1 cut(s) 22
NlaIII CATG 2 cut(s) 29, 91
PleI GAGTC 1 cut(s) 124
PpsI GAGTC 1 cut(s) 124
Psp124BI GAGCTC 1 cut(s) 40
SacI GAGCTC 1 cut(s) 40
Sau3AI GATC 1 cut(s) 22
SchI GAGTC 1 cut(s) 124
SduI GDGCHC 1 cut(s) 40
SetI ASST 4 cut(s) 40, 62, 119, 142
SmlI CTYRAG 1 cut(s) 18
SmoI CTYRAG 1 cut(s) 18
SstI GAGCTC 1 cut(s) 40
TspDTI ATGAA 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.