Src homology 3 domains
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g20830 |
| rosa_chinensis | RchiOBHm_Chr2g0113341 |
| rosa_laevigata | RLG00000018056 RLG00000018057 |
| rosa_multiflora | Rmu_co8050506.1_g000001 Rmu_sc0007415.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00129420 Rroxscaffold_2G00129470 Rroxscaffold_7G00197620 |
| rosa_rugosa | Rorug02G0186400 |
| rosa_samantha | Rh2AG219200 Rh2AG240900 Rh2BG255000 Rh2CG245200 Rh2DG225400 Rh2DG248900 Rh6BG157200 Rh6DG142400 Rh7AG282700 Rh7CG302000 Rh7DG286600 |
| rosa_wichuraiana | Rw0G002600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 180 |
| AcsI | RAATTY | 2 cut(s) | 28, 137 |
| AgsI | TTSAA | 2 cut(s) | 33, 180 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 160, 192 |
| AluBI | AGCT | 3 cut(s) | 100, 127, 238 |
| AluI | AGCT | 3 cut(s) | 100, 127, 238 |
| AlwI | GGATC | 1 cut(s) | 180 |
| Ama87I | CYCGRG | 1 cut(s) | 209 |
| ApoI | RAATTY | 2 cut(s) | 28, 137 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 15, 28, 204 |
| AspLEI | GCGC | 1 cut(s) | 82 |
| AvaI | CYCGRG | 1 cut(s) | 209 |
| BccI | CCATC | 2 cut(s) | 208, 259 |
| BclI | TGATCA | 1 cut(s) | 193 |
| BfaI | CTAG | 2 cut(s) | 92, 174 |
| BglII | AGATCT | 1 cut(s) | 62 |
| BmeT110I | CYCGRG | 1 cut(s) | 209 |
| BmsI | GCATC | 2 cut(s) | 172, 243 |
| BpmI | CTGGAG | 1 cut(s) | 140 |
| BpuEI | CTTGAG | 1 cut(s) | 242 |
| Bse3DI | GCAATG | 1 cut(s) | 227 |
| BseGI | GGATG | 1 cut(s) | 163 |
| BseMI | GCAATG | 1 cut(s) | 227 |
| BsiHKCI | CYCGRG | 1 cut(s) | 209 |
| BsoBI | CYCGRG | 1 cut(s) | 209 |
| Bsp143I | GATC | 3 cut(s) | 62, 185, 193 |
| BspHI | TCATGA | 2 cut(s) | 70, 196 |
| BspPI | GGATC | 1 cut(s) | 180 |
| BsrDI | GCAATG | 1 cut(s) | 227 |
| BssMI | GATC | 3 cut(s) | 62, 185, 193 |
| BstC8I | GCNNGC | 1 cut(s) | 84 |
| BstF5I | GGATG | 1 cut(s) | 163 |
| BstHHI | GCGC | 1 cut(s) | 82 |
| BstKTI | GATC | 3 cut(s) | 65, 188, 196 |
| BstMBI | GATC | 3 cut(s) | 62, 185, 193 |
| BstNSI | RCATGY | 1 cut(s) | 80 |
| BstX2I | RGATCY | 2 cut(s) | 62, 185 |
| BstYI | RGATCY | 2 cut(s) | 62, 185 |
| BtsCI | GGATG | 1 cut(s) | 163 |
| Cac8I | GCNNGC | 1 cut(s) | 84 |
| CciI | TCATGA | 2 cut(s) | 70, 196 |
| CfoI | GCGC | 1 cut(s) | 82 |
| CviAII | CATG | 3 cut(s) | 71, 77, 197 |
| CviJI | RGCY | 3 cut(s) | 100, 127, 238 |
| CviKI_1 | RGCY | 3 cut(s) | 100, 127, 238 |
| DpnI | GATC | 3 cut(s) | 64, 187, 195 |
| DpnII | GATC | 3 cut(s) | 62, 185, 193 |
| Eco88I | CYCGRG | 1 cut(s) | 209 |
| EcoRI | GAATTC | 1 cut(s) | 28 |
| FaeI | CATG | 3 cut(s) | 74, 80, 200 |
| FaiI | YATR | 5 cut(s) | 72, 78, 108, 198, 241 |
| FatI | CATG | 3 cut(s) | 70, 76, 196 |
| FbaI | TGATCA | 1 cut(s) | 193 |
| FokI | GGATG | 1 cut(s) | 150 |
| FspBI | CTAG | 2 cut(s) | 92, 174 |
| GlaI | GCGC | 1 cut(s) | 81 |
| GsuI | CTGGAG | 1 cut(s) | 140 |
| HhaI | GCGC | 1 cut(s) | 82 |
| Hin1II | CATG | 3 cut(s) | 74, 80, 200 |
| Hin6I | GCGC | 1 cut(s) | 80 |
| HinP1I | GCGC | 1 cut(s) | 80 |
| HinfI | GANTC | 2 cut(s) | 115, 149 |
| Hpy188I | TCNGA | 2 cut(s) | 154, 190 |
| Hpy188III | TCNNGA | 6 cut(s) | 71, 92, 119, 197, 209, 211 |
| HpyAV | CCTTC | 1 cut(s) | 151 |
| HpyCH4V | TGCA | 2 cut(s) | 163, 232 |
| Hsp92II | CATG | 3 cut(s) | 74, 80, 200 |
| HspAI | GCGC | 1 cut(s) | 80 |
| Ksp22I | TGATCA | 1 cut(s) | 193 |
| Kzo9I | GATC | 3 cut(s) | 62, 185, 193 |
| LpnPI | CCDG | 2 cut(s) | 34, 104 |
| LweI | GCATC | 2 cut(s) | 172, 243 |
| MaeI | CTAG | 2 cut(s) | 92, 174 |
| MalI | GATC | 3 cut(s) | 64, 187, 195 |
| MboI | GATC | 3 cut(s) | 62, 185, 193 |
| MflI | RGATCY | 2 cut(s) | 62, 185 |
| MluCI | AATT | 2 cut(s) | 28, 137 |
| MroXI | GAANNNNTTC | 3 cut(s) | 15, 28, 204 |
| MslI | CAYNNNNRTG | 2 cut(s) | 75, 168 |
| NdeII | GATC | 3 cut(s) | 62, 185, 193 |
| NlaIII | CATG | 3 cut(s) | 74, 80, 200 |
| NspI | RCATGY | 1 cut(s) | 80 |
| PaeR7I | CTCGAG | 1 cut(s) | 209 |
| PagI | TCATGA | 2 cut(s) | 70, 196 |
| PdmI | GAANNNNTTC | 3 cut(s) | 15, 28, 204 |
| PfeI | GAWTC | 2 cut(s) | 115, 149 |
| PsuI | RGATCY | 2 cut(s) | 62, 185 |
| RseI | CAYNNNNRTG | 2 cut(s) | 75, 168 |
| Sau3AI | GATC | 3 cut(s) | 62, 185, 193 |
| SetI | ASST | 4 cut(s) | 102, 129, 162, 240 |
| SfaNI | GCATC | 2 cut(s) | 172, 243 |
| Sfr274I | CTCGAG | 1 cut(s) | 209 |
| SlaI | CTCGAG | 1 cut(s) | 209 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 75, 168 |
| SmlI | CTYRAG | 2 cut(s) | 209, 257 |
| SmoI | CTYRAG | 2 cut(s) | 209, 257 |
| Sse9I | AATT | 2 cut(s) | 28, 137 |
| SspI | AATATT | 1 cut(s) | 44 |
| SspMI | CTAG | 2 cut(s) | 92, 174 |
| TaqI | TCGA | 1 cut(s) | 210 |
| TasI | AATT | 2 cut(s) | 28, 137 |
| TfiI | GAWTC | 2 cut(s) | 115, 149 |
| TspDTI | ATGAA | 5 cut(s) | 41, 87, 132, 213, 216 |
| XapI | RAATTY | 2 cut(s) | 28, 137 |
| XbaI | TCTAGA | 1 cut(s) | 91 |
| XceI | RCATGY | 1 cut(s) | 80 |
| XhoI | CTCGAG | 1 cut(s) | 209 |
| XmnI | GAANNNNTTC | 3 cut(s) | 15, 28, 204 |
| XspI | CTAG | 2 cut(s) | 92, 174 |