Rh7CG149400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
12194366 .. 12197795
3430 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG149400.1

Sequence Viewer

Length: 237 bp
ATGGGTGGAGCCCAGTTGATGAAGCGAATCCCTCGCATCAAATTTCCTCAGAGACATCCAAGGCCCGCTGGTTCTGAATCCCAGACAGCAGCACCTTTGGCTGGAGATTCTGTTCAAGCTTTCTTCTCAAGTTCAAAGGCTTCAACAACTTTGGGAGGAAAAGCTTCTGAACAACCCCCACGAACACCAGTATCCAAAGAAGAGATTGAGGCTATTTTGTTGGGTGGCTGCATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

78

Amino Acids

8.18

Weight (kDa)

9.86

Isoelectric Point (pI)

68.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 66
AcsI RAATTY 1 cut(s) 41
AfiI CCNNNNNNNGG 1 cut(s) 101
AgsI TTSAA 3 cut(s) 116, 135, 144
AloI GAACNNNNNNTCC 2 cut(s) 96, 128
AluBI AGCT 2 cut(s) 119, 164
AluI AGCT 2 cut(s) 119, 164
Alw26I GTCTC 1 cut(s) 46
AoxI GGCC 1 cut(s) 62
ApeKI GCWGC 2 cut(s) 89, 228
ApoI RAATTY 1 cut(s) 41
Asp700I GAANNNNTTC 1 cut(s) 163
AspS9I GGNCC 1 cut(s) 63
BaeI ACNNNNGTAYC 2 cut(s) 174, 207
BanII GRGCYC 1 cut(s) 13
BbvI GCAGC 2 cut(s) 101, 215
BciVI GTATCC 1 cut(s) 202
BcoDI GTCTC 1 cut(s) 46
BfuI GTATCC 1 cut(s) 202
BisI GCNGC 2 cut(s) 90, 229
BlsI GCNGC 2 cut(s) 91, 230
BmgT120I GGNCC 1 cut(s) 63
BmiI GGNNCC 1 cut(s) 10
BmrI ACTGGG 1 cut(s) 7
BmsI GCATC 1 cut(s) 45
BmuI ACTGGG 1 cut(s) 7
BpmI CTGGAG 1 cut(s) 123
BpuEI CTTGAG 1 cut(s) 112
BsaJI CCNNGG 1 cut(s) 59
BsaXI ACNNNNNCTCC 2 cut(s) 96, 126
Bsc4I CCNNNNNNNGG 1 cut(s) 101
Bse1I ACTGG 2 cut(s) 13, 188
BseDI CCNNGG 1 cut(s) 59
BseGI GGATG 1 cut(s) 55
BseLI CCNNNNNNNGG 1 cut(s) 101
BseMII CTCAG 1 cut(s) 62
BseNI ACTGG 2 cut(s) 13, 188
BseXI GCAGC 2 cut(s) 101, 215
BshFI GGCC 1 cut(s) 64
BslI CCNNNNNNNGG 1 cut(s) 101
BsmAI GTCTC 1 cut(s) 46
BsnI GGCC 1 cut(s) 64
Bsp1286I GDGCHC 1 cut(s) 13
BspACI CCGC 1 cut(s) 66
BspANI GGCC 1 cut(s) 64
BspCNI CTCAG 1 cut(s) 61
BspLI GGNNCC 1 cut(s) 10
BsrI ACTGG 2 cut(s) 13, 188
BssECI CCNNGG 1 cut(s) 59
BssT1I CCWWGG 1 cut(s) 59
Bst6I CTCTTC 1 cut(s) 195
BstC8I GCNNGC 1 cut(s) 66
BstDEI CTNAG 1 cut(s) 48
BstF5I GGATG 1 cut(s) 55
BstMAI GTCTC 1 cut(s) 46
BstMWI GCNNNNNNNGC 1 cut(s) 98
BstV1I GCAGC 2 cut(s) 101, 215
BsuI GTATCC 1 cut(s) 202
BsuRI GGCC 1 cut(s) 64
BtsCI GGATG 1 cut(s) 55
Cac8I GCNNGC 1 cut(s) 66
Cfr13I GGNCC 1 cut(s) 63
CviJI RGCY 8 cut(s) 11, 64, 101, 119, 140, 164, 212, 228
CviKI_1 RGCY 8 cut(s) 11, 64, 101, 119, 140, 164, 212, 228
DdeI CTNAG 1 cut(s) 48
Eam1104I CTCTTC 1 cut(s) 195
EarI CTCTTC 1 cut(s) 195
Eco130I CCWWGG 1 cut(s) 59
Eco24I GRGCYC 1 cut(s) 13
EcoT14I CCWWGG 1 cut(s) 59
EcoT38I GRGCYC 1 cut(s) 13
ErhI CCWWGG 1 cut(s) 59
FauI CCCGC 1 cut(s) 73
Fnu4HI GCNGC 2 cut(s) 90, 229
FokI GGATG 1 cut(s) 42
FriOI GRGCYC 1 cut(s) 13
Fsp4HI GCNGC 2 cut(s) 90, 229
GluI GCNGC 2 cut(s) 90, 229
GsuI CTGGAG 1 cut(s) 123
HaeIII GGCC 1 cut(s) 64
HindIII AAGCTT 2 cut(s) 117, 162
HinfI GANTC 3 cut(s) 27, 77, 107
Hpy188I TCNGA 4 cut(s) 51, 76, 169, 236
HpyCH4V TGCA 1 cut(s) 231
HpyF10VI GCNNNNNNNGC 1 cut(s) 98
HpyF3I CTNAG 1 cut(s) 48
LmnI GCTCC 1 cut(s) 8
LpnPI CCDG 5 cut(s) 26, 54, 87, 95, 201
Lsp1109I GCAGC 2 cut(s) 101, 215
LweI GCATC 1 cut(s) 45
MboII GAAGA 2 cut(s) 115, 212
MhlI GDGCHC 1 cut(s) 13
MluCI AATT 1 cut(s) 41
MnlI CCTC 4 cut(s) 42, 57, 149, 202
MroXI GAANNNNTTC 1 cut(s) 163
MspA1I CMGCKG 1 cut(s) 68
MwoI GCNNNNNNNGC 1 cut(s) 98
NlaIV GGNNCC 1 cut(s) 10
PdmI GAANNNNTTC 1 cut(s) 163
PfeI GAWTC 3 cut(s) 27, 77, 107
PkrI GCNGC 2 cut(s) 91, 230
PspN4I GGNNCC 1 cut(s) 10
PspPI GGNCC 1 cut(s) 63
SatI GCNGC 2 cut(s) 90, 229
Sau96I GGNCC 1 cut(s) 63
SduI GDGCHC 1 cut(s) 13
SetI ASST 3 cut(s) 97, 121, 166
SfaNI GCATC 1 cut(s) 45
SmlI CTYRAG 1 cut(s) 127
SmoI CTYRAG 1 cut(s) 127
Sse9I AATT 1 cut(s) 41
SsiI CCGC 1 cut(s) 66
StyI CCWWGG 1 cut(s) 59
TasI AATT 1 cut(s) 41
TfiI GAWTC 3 cut(s) 27, 77, 107
TseI GCWGC 2 cut(s) 89, 228
TspDTI ATGAA 1 cut(s) 35
XapI RAATTY 1 cut(s) 41
XmnI GAANNNNTTC 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.