Rw7G015030

Salutaridine reductase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
14913044 .. 14914047
1004 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G015030.1

Sequence Viewer

Length: 561 bp
ATGTTTGGTTCAAAAGTTGGAGACCTGAATAAGTTTCTAGAGCAAACATACGAAAGTGCAGAGAAATGTCTTAAAACGAACTACTATGGAATCAAGCAAACGAGCAAAGCACTTATTCGACTTCTGCAAAAGTCTGATTCACCGAAAATAGTCAATGTCTCTTCCAACGTAGGACAGTTAAAGCTTCTTACGCATCAGAAAGCAAGGGATGAGCTAGGAGATGTCGAAGGCCTCAACGAAGAGAAAGTGGACAAGGTTGTAGAGGATTTTCTGAAGGATGTGAAAGAGAATTTGGTCGAAGCTAATGGCTGGCCTATAAACTTCTCTGCTTACAATGTGTCCAAAGCAGCCTTGAATGCTTACACCAGAGTTCTGGCAAATAATCACCCCAACATTGCAATCAATGCAGTTGGTCCCGGCCACACTAGCACTGACTTCAGCTTCAATCTTGGTGGCCACTCTGTTGAAGAAGGTGCAAAGGGTCCTGTTAAGCTGGCCTTGAGCCCTGAAGGTGGACCTTCTGGCCTCTATTTTGACCAGCTTGAAGTCTCAACCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

186

Amino Acids

20.27

Weight (kDa)

5.83

Isoelectric Point (pI)

23.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 2 cut(s) 418, 454
AcsI RAATTY 1 cut(s) 289
AcuI CTGAAG 3 cut(s) 293, 421, 528
AfiI CCNNNNNNNGG 1 cut(s) 512
AgsI TTSAA 5 cut(s) 12, 355, 445, 467, 545
AjuI GAANNNNNNNTTGG 2 cut(s) 275, 307
AluBI AGCT 6 cut(s) 184, 214, 302, 441, 493, 541
AluI AGCT 6 cut(s) 184, 214, 302, 441, 493, 541
Alw26I GTCTC 3 cut(s) 15, 163, 553
AoxI GGCC 6 cut(s) 229, 311, 418, 454, 495, 523
ApeKI GCWGC 1 cut(s) 347
ApoI RAATTY 1 cut(s) 289
AspS9I GGNCC 3 cut(s) 413, 482, 515
AsuC2I CCSGG 1 cut(s) 417
AsuHPI GGTGA 2 cut(s) 132, 377
AvaII GGWCC 3 cut(s) 413, 482, 515
BalI TGGCCA 1 cut(s) 456
BanII GRGCYC 1 cut(s) 506
BbvI GCAGC 1 cut(s) 359
BcnI CCSGG 1 cut(s) 417
BcoDI GTCTC 3 cut(s) 15, 163, 553
BfaI CTAG 3 cut(s) 38, 215, 426
BisI GCNGC 1 cut(s) 348
BlsI GCNGC 1 cut(s) 349
Bme1390I CCNGG 1 cut(s) 417
Bme18I GGWCC 3 cut(s) 413, 482, 515
BmgT120I GGNCC 3 cut(s) 413, 482, 515
BmiI GGNNCC 2 cut(s) 415, 483
BmrFI CCNGG 1 cut(s) 417
BmsI GCATC 1 cut(s) 202
BpuEI CTTGAG 1 cut(s) 520
BpuMI CCSGG 1 cut(s) 417
BsaI GGTCTC 1 cut(s) 15
Bsc4I CCNNNNNNNGG 1 cut(s) 512
Bse3DI GCAATG 1 cut(s) 393
BseGI GGATG 2 cut(s) 214, 283
BseLI CCNNNNNNNGG 1 cut(s) 512
BseMI GCAATG 1 cut(s) 393
BseXI GCAGC 1 cut(s) 359
BsgI GTGCAG 1 cut(s) 78
BshFI GGCC 6 cut(s) 231, 313, 420, 456, 497, 525
BsiSI CCGG 1 cut(s) 417
BslFI GGGAC 1 cut(s) 399
BslI CCNNNNNNNGG 1 cut(s) 512
BsmAI GTCTC 3 cut(s) 15, 163, 553
BsmFI GGGAC 1 cut(s) 399
BsmI GAATGC 1 cut(s) 361
BsnI GGCC 6 cut(s) 231, 313, 420, 456, 497, 525
Bso31I GGTCTC 1 cut(s) 15
Bsp1286I GDGCHC 1 cut(s) 506
BspANI GGCC 6 cut(s) 231, 313, 420, 456, 497, 525
BspLI GGNNCC 2 cut(s) 415, 483
BspTNI GGTCTC 1 cut(s) 15
BsrDI GCAATG 1 cut(s) 393
Bst4CI ACNGT 1 cut(s) 177
Bst6I CTCTTC 2 cut(s) 166, 234
BstAPI GCANNNNNTGC 1 cut(s) 404
BstC8I GCNNGC 2 cut(s) 311, 495
BstF5I GGATG 2 cut(s) 214, 283
BstMAI GTCTC 3 cut(s) 15, 163, 553
BstMWI GCNNNNNNNGC 4 cut(s) 190, 356, 404, 426
BstSCI CCNGG 1 cut(s) 415
BstV1I GCAGC 1 cut(s) 359
BstXI CCANNNNNNTGG 1 cut(s) 373
BsuRI GGCC 6 cut(s) 231, 313, 420, 456, 497, 525
BtsCI GGATG 2 cut(s) 214, 283
BtsIMutI CAGTG 1 cut(s) 429
Cac8I GCNNGC 2 cut(s) 311, 495
Cfr13I GGNCC 3 cut(s) 413, 482, 515
CspCI CAANNNNNGTGG 2 cut(s) 433, 468
EaeI YGGCCR 2 cut(s) 418, 454
Eam1104I CTCTTC 2 cut(s) 166, 234
EarI CTCTTC 2 cut(s) 166, 234
Eco147I AGGCCT 1 cut(s) 231
Eco24I GRGCYC 1 cut(s) 506
Eco31I GGTCTC 1 cut(s) 15
Eco47I GGWCC 3 cut(s) 413, 482, 515
Eco57I CTGAAG 3 cut(s) 293, 421, 528
EcoO109I RGGNCCY 1 cut(s) 482
EcoT38I GRGCYC 1 cut(s) 506
FaiI YATR 3 cut(s) 49, 87, 317
FalI AAGNNNNNCTT 2 cut(s) 482, 514
FaqI GGGAC 1 cut(s) 399
Fnu4HI GCNGC 1 cut(s) 348
FokI GGATG 2 cut(s) 221, 290
FriOI GRGCYC 1 cut(s) 506
Fsp4HI GCNGC 1 cut(s) 348
FspBI CTAG 3 cut(s) 38, 215, 426
GluI GCNGC 1 cut(s) 348
HaeIII GGCC 6 cut(s) 231, 313, 420, 456, 497, 525
HapII CCGG 1 cut(s) 417
HindIII AAGCTT 1 cut(s) 182
HinfI GANTC 2 cut(s) 90, 137
HpaII CCGG 1 cut(s) 417
HphI GGTGA 2 cut(s) 132, 377
Hpy166II GTNNAC 2 cut(s) 250, 515
Hpy188I TCNGA 4 cut(s) 136, 198, 273, 560
Hpy188III TCNNGA 1 cut(s) 38
Hpy8I GTNNAC 2 cut(s) 250, 515
HpyAV CCTTC 5 cut(s) 221, 268, 464, 503, 528
HpyCH4III ACNGT 1 cut(s) 177
HpyCH4IV ACGT 1 cut(s) 168
HpyCH4V TGCA 5 cut(s) 59, 127, 398, 407, 476
HpyF10VI GCNNNNNNNGC 4 cut(s) 190, 356, 404, 426
HpySE526I ACGT 1 cut(s) 168
Lsp1109I GCAGC 1 cut(s) 359
LweI GCATC 1 cut(s) 202
MaeI CTAG 3 cut(s) 38, 215, 426
MaeII ACGT 1 cut(s) 168
MboII GAAGA 3 cut(s) 153, 251, 479
MhlI GDGCHC 1 cut(s) 506
MlsI TGGCCA 1 cut(s) 456
MluCI AATT 1 cut(s) 289
MluNI TGGCCA 1 cut(s) 456
MmeI TCCRAC 1 cut(s) 189
MnlI CCTC 3 cut(s) 242, 256, 536
Mox20I TGGCCA 1 cut(s) 456
MscI TGGCCA 1 cut(s) 456
MseI TTAA 3 cut(s) 72, 179, 489
Msp20I TGGCCA 1 cut(s) 456
MspI CCGG 1 cut(s) 417
MspR9I CCNGG 1 cut(s) 417
Mva1269I GAATGC 1 cut(s) 361
MwoI GCNNNNNNNGC 4 cut(s) 190, 356, 404, 426
NciI CCSGG 1 cut(s) 417
NlaIV GGNNCC 2 cut(s) 415, 483
PceI AGGCCT 1 cut(s) 231
PctI GAATGC 1 cut(s) 361
PfeI GAWTC 2 cut(s) 90, 137
PkrI GCNGC 1 cut(s) 349
PpuMI RGGWCCY 1 cut(s) 482
Psp5II RGGWCCY 1 cut(s) 482
PspN4I GGNNCC 2 cut(s) 415, 483
PspPI GGNCC 3 cut(s) 413, 482, 515
PspPPI RGGWCCY 1 cut(s) 482
SaqAI TTAA 3 cut(s) 72, 179, 489
SatI GCNGC 1 cut(s) 348
Sau96I GGNCC 3 cut(s) 413, 482, 515
ScrFI CCNGG 1 cut(s) 417
SduI GDGCHC 1 cut(s) 506
SfaNI GCATC 1 cut(s) 202
SinI GGWCC 3 cut(s) 413, 482, 515
SmlI CTYRAG 1 cut(s) 499
SmoI CTYRAG 1 cut(s) 499
Sse9I AATT 1 cut(s) 289
SseBI AGGCCT 1 cut(s) 231
SspMI CTAG 3 cut(s) 38, 215, 426
StuI AGGCCT 1 cut(s) 231
StyD4I CCNGG 1 cut(s) 415
TaaI ACNGT 1 cut(s) 177
TaiI ACGT 1 cut(s) 171
TaqI TCGA 3 cut(s) 118, 225, 297
TasI AATT 1 cut(s) 289
TfiI GAWTC 2 cut(s) 90, 137
Tru1I TTAA 3 cut(s) 72, 179, 489
Tru9I TTAA 3 cut(s) 72, 179, 489
TscAI CASTG 1 cut(s) 436
TseI GCWGC 1 cut(s) 347
TspRI CASTG 1 cut(s) 436
VpaK11BI GGWCC 3 cut(s) 413, 482, 515
XapI RAATTY 1 cut(s) 289
XbaI TCTAGA 1 cut(s) 37
XspI CTAG 3 cut(s) 38, 215, 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.