AT1G02920
ERF Family

Belongs to the GST superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0003136
Physical Location & Seq
Reverse (-)
658578 .. 659980
1403 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G02920.1

Sequence Viewer

Length: 630 bp
ATGGCAGGAATCAAAGTTTTCGGTCACCCAGCTTCCACAGCCACTAGAAGAGTTCTCATCGCTCTTCACGAGAAGAATCTCGACTTTGAATTCGTTCATATCGAGCTCAAAGATGGTGAACACAAGAAAGAGCCTTTCATCTTCCGCAACCCTTTTGGTAAAGTTCCAGCCTTTGAAGATGGAGACTTCAAGCTTTTCGAATCAAGAGCAATCACTCAATACATAGCTCATTTTTACTCAGACAAAGGAAACCAACTTGTCTCCCTTGGCTCCAAGGACATTGCGGGCATAGCCATGGGCATTGAAATTGAATCGCATGAGTTTGACCCAGTTGGTTCAAAGCTTGTTTGGGAGCAAGTCTTAAAGCCTTTGTATGGTATGACCACAGACAAAACCGTTGTTGAAGAAGAAGAGGCTAAGCTAGCCAAGGTCCTCGATGTTTACGAACACAGGCTTGGTGAGTCCAAGTATTTGGCTTCTGATAAATTCACTTTGGTCGATCTTCACACTATCCCTGTGATTCAGTACTTGCTTGGTACACCAACTAAGAAACTCTTTGACGAGCGTCCACATGTCAGTGCTTGGGTTGCTGACATCACTTCTAGGCCTTCTGCTAAGAAGGTTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002239 GO:0002376 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005507 GO:0005515 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005911 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0006979 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009636 GO:0009651 GO:0009814 GO:0009817 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010043 GO:0010319 GO:0016020 GO:0016740 GO:0016765 GO:0019748 GO:0019904 GO:0030054 GO:0030312 GO:0031090 GO:0031967 GO:0031975 GO:0033218 GO:0034641 GO:0042221 GO:0042277 GO:0042742 GO:0043167 GO:0043168 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046686 GO:0046872 GO:0046914 GO:0048037 GO:0048046 GO:0050832 GO:0050896 GO:0050897 GO:0051186 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0072341 GO:0080167 GO:0097159 GO:0097243 GO:0097367 GO:0098542 GO:0098588 GO:0098754 GO:0098805 GO:1900750 GO:1901363 GO:1901564 GO:1901681 GO:1901700 GO:2001147 GO:2001227
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_N

Protein Analysis

209

Amino Acids

23.6

Weight (kDa)

6.14

Isoelectric Point (pI)

29.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 4 - 76 3.8e-21 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 7 - 81 2e-15 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 12 - 77 4.4e-12 Glutathione S-transferase, N-terminal domain
GST_C PF00043 121 - 203 3.3e-17 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 133 - 197 3.7e-06 Glutathione S-transferase, C-terminal domain
GST_C_3 PF14497 134 - 207 1e-08 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 145, 284
AcsI RAATTY 2 cut(s) 89, 485
AfaI GTAC 2 cut(s) 527, 538
AfiI CCNNNNNNNGG 1 cut(s) 374
AflIII ACRYGT 1 cut(s) 571
AgsI TTSAA 7 cut(s) 89, 176, 190, 305, 311, 339, 404
AjuI GAANNNNNNNTTGG 2 cut(s) 438, 470
AluBI AGCT 6 cut(s) 32, 106, 193, 227, 343, 421
AluI AGCT 6 cut(s) 32, 106, 193, 227, 343, 421
Alw21I GWGCWC 1 cut(s) 108
Alw26I GTCTC 2 cut(s) 177, 265
AoxI GGCC 1 cut(s) 605
ApoI RAATTY 2 cut(s) 89, 485
ArsI GACNNNNNNTTYG 2 cut(s) 74, 106
Asp700I GAANNNNTTC 1 cut(s) 93
AspS9I GGNCC 1 cut(s) 430
AsuHPI GGTGA 3 cut(s) 17, 128, 470
AsuII TTCGAA 1 cut(s) 198
AsuNHI GCTAGC 1 cut(s) 421
AvaII GGWCC 1 cut(s) 430
BanII GRGCYC 1 cut(s) 108
BauI CACGAG 1 cut(s) 68
Bbv12I GWGCWC 1 cut(s) 108
BccI CCATC 2 cut(s) 107, 173
BcoDI GTCTC 2 cut(s) 177, 265
BfaI CTAG 3 cut(s) 45, 422, 603
BlpI GCTNAGC 1 cut(s) 417
BmcAI AGTACT 1 cut(s) 527
Bme18I GGWCC 1 cut(s) 430
BmgT120I GGNCC 1 cut(s) 430
BmiI GGNNCC 1 cut(s) 271
BmrI ACTGGG 1 cut(s) 323
BmtI GCTAGC 1 cut(s) 425
BmuI ACTGGG 1 cut(s) 323
BoxI GACNNNNGTC 1 cut(s) 564
Bpu1102I GCTNAGC 1 cut(s) 417
Bpu14I TTCGAA 1 cut(s) 198
BsaJI CCNNGG 4 cut(s) 265, 273, 294, 426
Bsc4I CCNNNNNNNGG 1 cut(s) 374
Bse1I ACTGG 1 cut(s) 329
Bse3DI GCAATG 1 cut(s) 279
BseDI CCNNGG 4 cut(s) 265, 273, 294, 426
BseLI CCNNNNNNNGG 1 cut(s) 374
BseMI GCAATG 1 cut(s) 279
BseMII CTCAG 1 cut(s) 252
BseNI ACTGG 1 cut(s) 329
BseYI CCCAGC 1 cut(s) 28
BshFI GGCC 1 cut(s) 607
BsiHKAI GWGCWC 1 cut(s) 108
BslI CCNNNNNNNGG 1 cut(s) 374
BsmAI GTCTC 2 cut(s) 177, 265
BsnI GGCC 1 cut(s) 607
Bsp119I TTCGAA 1 cut(s) 198
Bsp1286I GDGCHC 1 cut(s) 108
Bsp143I GATC 1 cut(s) 499
Bsp1720I GCTNAGC 1 cut(s) 417
Bsp19I CCATGG 1 cut(s) 294
BspACI CCGC 2 cut(s) 145, 284
BspANI GGCC 1 cut(s) 607
BspCNI CTCAG 1 cut(s) 251
BspLI GGNNCC 1 cut(s) 271
BspOI GCTAGC 1 cut(s) 425
BspQI GCTCTTC 1 cut(s) 69
BspT104I TTCGAA 1 cut(s) 198
BsrDI GCAATG 1 cut(s) 279
BsrI ACTGG 1 cut(s) 329
BssECI CCNNGG 4 cut(s) 265, 273, 294, 426
BssMI GATC 1 cut(s) 499
BssSI CACGAG 1 cut(s) 68
BssT1I CCWWGG 4 cut(s) 265, 273, 294, 426
Bst2BI CACGAG 1 cut(s) 68
Bst4CI ACNGT 1 cut(s) 397
Bst6I CTCTTC 3 cut(s) 43, 69, 405
BstBI TTCGAA 1 cut(s) 198
BstC8I GCNNGC 2 cut(s) 286, 423
BstDEI CTNAG 4 cut(s) 238, 417, 546, 615
BstDSI CCRYGG 1 cut(s) 294
BstEII GGTNACC 1 cut(s) 23
BstKTI GATC 1 cut(s) 502
BstMAI GTCTC 2 cut(s) 177, 265
BstMBI GATC 1 cut(s) 499
BstMWI GCNNNNNNNGC 4 cut(s) 38, 290, 422, 587
BstNSI RCATGY 1 cut(s) 575
BstPAI GACNNNNGTC 1 cut(s) 564
BstPI GGTNACC 1 cut(s) 23
BstXI CCANNNNNNTGG 1 cut(s) 472
BsuRI GGCC 1 cut(s) 607
BtgI CCRYGG 1 cut(s) 294
BtgZI GCGATG 1 cut(s) 43
BtsIMutI CAGTG 1 cut(s) 583
Cac8I GCNNGC 2 cut(s) 286, 423
Cfr13I GGNCC 1 cut(s) 430
CseI GACGC 1 cut(s) 554
Csp6I GTAC 2 cut(s) 526, 537
CviAII CATG 3 cut(s) 295, 317, 572
CviQI GTAC 2 cut(s) 526, 537
DdeI CTNAG 4 cut(s) 238, 417, 546, 615
DpnI GATC 1 cut(s) 501
DpnII GATC 1 cut(s) 499
Eam1104I CTCTTC 3 cut(s) 43, 69, 405
EarI CTCTTC 3 cut(s) 43, 69, 405
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 4 cut(s) 265, 273, 294, 426
Eco147I AGGCCT 1 cut(s) 607
Eco24I GRGCYC 1 cut(s) 108
Eco47I GGWCC 1 cut(s) 430
Eco53kI GAGCTC 1 cut(s) 106
Eco91I GGTNACC 1 cut(s) 23
EcoICRI GAGCTC 1 cut(s) 106
EcoO109I RGGNCCY 1 cut(s) 430
EcoO65I GGTNACC 1 cut(s) 23
EcoRI GAATTC 1 cut(s) 89
EcoT14I CCWWGG 4 cut(s) 265, 273, 294, 426
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 4 cut(s) 265, 273, 294, 426
FaeI CATG 3 cut(s) 298, 320, 575
FaiI YATR 8 cut(s) 99, 224, 290, 296, 318, 375, 380, 573
FalI AAGNNNNNCTT 2 cut(s) 539, 571
FatI CATG 3 cut(s) 294, 316, 571
FauI CCCGC 1 cut(s) 277
FriOI GRGCYC 1 cut(s) 108
FspBI CTAG 3 cut(s) 45, 422, 603
GsaI CCCAGC 1 cut(s) 32
HaeIII GGCC 1 cut(s) 607
HgaI GACGC 1 cut(s) 554
Hin1II CATG 3 cut(s) 298, 320, 575
HindIII AAGCTT 2 cut(s) 191, 341
HinfI GANTC 6 cut(s) 9, 76, 200, 311, 461, 520
HphI GGTGA 3 cut(s) 17, 128, 470
Hpy166II GTNNAC 4 cut(s) 119, 442, 539, 569
Hpy188I TCNGA 2 cut(s) 241, 481
Hpy188III TCNNGA 3 cut(s) 68, 80, 204
Hpy8I GTNNAC 4 cut(s) 119, 442, 539, 569
HpyAV CCTTC 2 cut(s) 613, 618
HpyCH4III ACNGT 1 cut(s) 397
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 290, 422, 587
HpyF3I CTNAG 4 cut(s) 238, 417, 546, 615
Hsp92II CATG 3 cut(s) 298, 320, 575
Kzo9I GATC 1 cut(s) 499
LguI GCTCTTC 1 cut(s) 69
LmnI GCTCC 2 cut(s) 275, 352
LpnPI CCDG 5 cut(s) 42, 180, 342, 436, 528
MaeI CTAG 3 cut(s) 45, 422, 603
MaeIII GTNAC 1 cut(s) 23
MalI GATC 1 cut(s) 501
MboI GATC 1 cut(s) 499
MboII GAAGA 9 cut(s) 56, 60, 85, 133, 188, 416, 419, 422, 494
MhlI GDGCHC 1 cut(s) 108
MluCI AATT 3 cut(s) 89, 306, 485
MlyI GAGTC 1 cut(s) 470
MnlI CCTC 2 cut(s) 406, 443
MroXI GAANNNNTTC 1 cut(s) 93
MseI TTAA 2 cut(s) 362, 628
MslI CAYNNNNRTG 2 cut(s) 293, 576
MwoI GCNNNNNNNGC 4 cut(s) 38, 290, 422, 587
NcoI CCATGG 1 cut(s) 294
NdeII GATC 1 cut(s) 499
NheI GCTAGC 1 cut(s) 421
NlaIII CATG 3 cut(s) 298, 320, 575
NlaIV GGNNCC 1 cut(s) 271
NmuCI GTSAC 1 cut(s) 23
NspI RCATGY 1 cut(s) 575
NspV TTCGAA 1 cut(s) 198
PceI AGGCCT 1 cut(s) 607
PciI ACATGT 1 cut(s) 571
PciSI GCTCTTC 1 cut(s) 69
PcsI WCGNNNNNNNCGW 3 cut(s) 66, 99, 441
PdmI GAANNNNTTC 1 cut(s) 93
PfeI GAWTC 5 cut(s) 9, 76, 200, 311, 520
PleI GAGTC 1 cut(s) 469
PpsI GAGTC 1 cut(s) 469
PpuMI RGGWCCY 1 cut(s) 430
PscI ACATGT 1 cut(s) 571
PshAI GACNNNNGTC 1 cut(s) 564
Psp124BI GAGCTC 1 cut(s) 108
Psp5II RGGWCCY 1 cut(s) 430
PspEI GGTNACC 1 cut(s) 23
PspFI CCCAGC 1 cut(s) 28
PspN4I GGNNCC 1 cut(s) 271
PspPI GGNCC 1 cut(s) 430
PspPPI RGGWCCY 1 cut(s) 430
RsaI GTAC 2 cut(s) 527, 538
RsaNI GTAC 2 cut(s) 526, 537
RseI CAYNNNNRTG 2 cut(s) 293, 576
SacI GAGCTC 1 cut(s) 108
SapI GCTCTTC 1 cut(s) 69
SaqAI TTAA 2 cut(s) 362, 628
Sau3AI GATC 1 cut(s) 499
Sau96I GGNCC 1 cut(s) 430
ScaI AGTACT 1 cut(s) 527
SchI GAGTC 1 cut(s) 470
SduI GDGCHC 1 cut(s) 108
SetI ASST 8 cut(s) 34, 108, 195, 229, 345, 423, 432, 624
SfuI TTCGAA 1 cut(s) 198
SinI GGWCC 1 cut(s) 430
SmiMI CAYNNNNRTG 2 cut(s) 293, 576
Sse9I AATT 3 cut(s) 89, 306, 485
SseBI AGGCCT 1 cut(s) 607
SsiI CCGC 2 cut(s) 145, 284
SspMI CTAG 3 cut(s) 45, 422, 603
SstI GAGCTC 1 cut(s) 108
StuI AGGCCT 1 cut(s) 607
StyI CCWWGG 4 cut(s) 265, 273, 294, 426
TaaI ACNGT 1 cut(s) 397
TaqI TCGA 5 cut(s) 81, 102, 198, 435, 498
TaqII GACCGA 1 cut(s) 11
TasI AATT 3 cut(s) 89, 306, 485
TatI WGTACW 1 cut(s) 525
TfiI GAWTC 5 cut(s) 9, 76, 200, 311, 520
Tru1I TTAA 2 cut(s) 362, 628
Tru9I TTAA 2 cut(s) 362, 628
TscAI CASTG 1 cut(s) 583
TseFI GTSAC 1 cut(s) 23
Tsp45I GTSAC 1 cut(s) 23
TspDTI ATGAA 2 cut(s) 86, 127
TspRI CASTG 1 cut(s) 583
VpaK11BI GGWCC 1 cut(s) 430
XapI RAATTY 2 cut(s) 89, 485
XceI RCATGY 1 cut(s) 575
XmnI GAANNNNTTC 1 cut(s) 93
XspI CTAG 3 cut(s) 45, 422, 603
ZrmI AGTACT 1 cut(s) 527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.