AT4G02520
ERF Family

Belongs to the GST superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0003136
Physical Location & Seq
Reverse (-)
1110343 .. 1112033
1691 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G02520.1

Sequence Viewer

Length: 639 bp
ATGGCAGGTATCAAAGTTTTCGGACACCCAGCTTCCATTGCCACCAGGAGAGTCCTCATCGCCCTCCACGAGAAAAACCTCGACTTTGAGCTCGTTCATGTCGAACTCAAAGACGGTGAGCACAAGAAGGAGCCTTTCCTCTCCCGCAACCCTTTTGGTCAGGTTCCAGCCTTTGAAGATGGAGACCTCAAGCTCTTCGAATCAAGAGCGATTACTCAGTACATAGCTCACCGATATGAAAACCAAGGAACCAACCTTCTCCAAACCGACTCCAAGAACATATCTCAGTACGCAATCATGGCCATTGGAATGCAAGTAGAAGATCACCAGTTCGACCCAGTGGCTTCAAAGCTTGCTTTTGAACAAATATTCAAGTCCATCTACGGCTTGACCACAGACGAAGCCGTTGTTGCAGAAGAGGAGGCTAAGTTAGCCAAGGTCCTTGATGTCTACGAGGCTAGGCTCAAGGAGTTCAAGTATTTGGCTGGTGAAACTTTCACTTTGACTGATCTTCACCACATTCCCGCGATTCAATACCTGCTCGGAACTCCCACCAAGAAGCTCTTCACCGAGCGTCCACGTGTCAATGAGTGGGTGGCTGAAATCACCAAGAGGCCAGCTTCCGAGAAGGTTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002239 GO:0002376 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005507 GO:0005515 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005911 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0006979 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009636 GO:0009651 GO:0009814 GO:0009817 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010043 GO:0010319 GO:0016020 GO:0016740 GO:0016765 GO:0019748 GO:0019904 GO:0030054 GO:0030312 GO:0031090 GO:0031967 GO:0031975 GO:0033218 GO:0034641 GO:0042221 GO:0042277 GO:0042742 GO:0043167 GO:0043168 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046686 GO:0046872 GO:0046914 GO:0048037 GO:0048046 GO:0050832 GO:0050896 GO:0050897 GO:0051186 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0072341 GO:0080167 GO:0097159 GO:0097243 GO:0097367 GO:0098542 GO:0098588 GO:0098754 GO:0098805 GO:1900750 GO:1901363 GO:1901564 GO:1901681 GO:1901700 GO:2001147 GO:2001227
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_N

Protein Analysis

212

Amino Acids

24.13

Weight (kDa)

5.92

Isoelectric Point (pI)

31.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 4 - 76 1.3e-22 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 7 - 81 1.1e-15 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 14 - 77 1.6e-13 Glutathione S-transferase, N-terminal domain
GST_C PF00043 115 - 206 1.4e-14 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 135 - 200 1.9e-06 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 546
AccI GTMKAC 1 cut(s) 450
AccII CGCG 1 cut(s) 527
AciI CCGC 2 cut(s) 145, 525
AcoI YGGCCR 1 cut(s) 300
AcvI CACGTG 1 cut(s) 581
AfaI GTAC 2 cut(s) 221, 290
AflIII ACRYGT 1 cut(s) 580
AgsI TTSAA 6 cut(s) 176, 348, 362, 373, 475, 533
AjnI CCWGG 1 cut(s) 44
AjuI GAANNNNNNNTTGG 2 cut(s) 548, 580
AluBI AGCT 7 cut(s) 32, 91, 193, 227, 352, 562, 620
AluI AGCT 7 cut(s) 32, 91, 193, 227, 352, 562, 620
Alw21I GWGCWC 2 cut(s) 93, 123
Alw26I GTCTC 1 cut(s) 177
AoxI GGCC 2 cut(s) 300, 614
Asp700I GAANNNNTTC 1 cut(s) 563
AspS9I GGNCC 1 cut(s) 439
AsuHPI GGTGA 7 cut(s) 128, 221, 317, 500, 506, 559, 598
AsuII TTCGAA 1 cut(s) 198
AvaII GGWCC 1 cut(s) 439
BalI TGGCCA 1 cut(s) 302
BanII GRGCYC 1 cut(s) 93
BauI CACGAG 1 cut(s) 68
BbrPI CACGTG 1 cut(s) 581
Bbv12I GWGCWC 2 cut(s) 93, 123
BccI CCATC 2 cut(s) 173, 386
BceAI ACGGC 2 cut(s) 389, 400
BciT130I CCWGG 1 cut(s) 46
BcoDI GTCTC 1 cut(s) 177
BfaI CTAG 1 cut(s) 459
BfuAI ACCTGC 1 cut(s) 546
Bme1390I CCNGG 1 cut(s) 46
Bme18I GGWCC 1 cut(s) 439
BmgT120I GGNCC 1 cut(s) 439
BmiI GGNNCC 3 cut(s) 132, 165, 250
BmrFI CCNGG 1 cut(s) 46
BmrI ACTGGG 1 cut(s) 332
BmuI ACTGGG 1 cut(s) 332
Bpu14I TTCGAA 1 cut(s) 198
BpuEI CTTGAG 2 cut(s) 173, 449
BsaAI YACGTR 1 cut(s) 581
BsaI GGTCTC 1 cut(s) 177
BsaJI CCNNGG 2 cut(s) 244, 435
BsaXI ACNNNNNCTCC 4 cut(s) 413, 443, 461, 491
Bse1I ACTGG 2 cut(s) 328, 338
Bse3DI GCAATG 1 cut(s) 36
BseBI CCWGG 1 cut(s) 46
BseDI CCNNGG 2 cut(s) 244, 435
BseMI GCAATG 1 cut(s) 36
BseMII CTCAG 2 cut(s) 230, 299
BseNI ACTGG 2 cut(s) 328, 338
BseRI GAGGAG 1 cut(s) 434
BseYI CCCAGC 1 cut(s) 28
Bsh1236I CGCG 1 cut(s) 527
BshFI GGCC 2 cut(s) 302, 616
BsiHKAI GWGCWC 2 cut(s) 93, 123
BsmAI GTCTC 1 cut(s) 177
BsmI GAATGC 1 cut(s) 315
BsnI GGCC 2 cut(s) 302, 616
Bso31I GGTCTC 1 cut(s) 177
Bsp119I TTCGAA 1 cut(s) 198
Bsp1286I GDGCHC 2 cut(s) 93, 123
Bsp143I GATC 2 cut(s) 322, 508
BspACI CCGC 2 cut(s) 145, 525
BspANI GGCC 2 cut(s) 302, 616
BspCNI CTCAG 2 cut(s) 229, 298
BspFNI CGCG 1 cut(s) 527
BspLI GGNNCC 3 cut(s) 132, 165, 250
BspMI ACCTGC 1 cut(s) 546
BspQI GCTCTTC 2 cut(s) 200, 569
BspT104I TTCGAA 1 cut(s) 198
BspTNI GGTCTC 1 cut(s) 177
BsrDI GCAATG 1 cut(s) 36
BsrI ACTGG 2 cut(s) 328, 338
BssECI CCNNGG 2 cut(s) 244, 435
BssMI GATC 2 cut(s) 322, 508
BssSI CACGAG 1 cut(s) 68
BssT1I CCWWGG 2 cut(s) 244, 435
Bst2BI CACGAG 1 cut(s) 68
Bst2UI CCWGG 1 cut(s) 46
Bst4CI ACNGT 1 cut(s) 116
Bst6I CTCTTC 3 cut(s) 200, 411, 569
BstBAI YACGTR 1 cut(s) 581
BstBI TTCGAA 1 cut(s) 198
BstC8I GCNNGC 2 cut(s) 354, 618
BstDEI CTNAG 3 cut(s) 216, 285, 426
BstFNI CGCG 1 cut(s) 527
BstKTI GATC 2 cut(s) 325, 511
BstMAI GTCTC 1 cut(s) 177
BstMBI GATC 2 cut(s) 322, 508
BstMWI GCNNNNNNNGC 4 cut(s) 38, 299, 410, 431
BstNI CCWGG 1 cut(s) 46
BstSCI CCNGG 1 cut(s) 44
BstUI CGCG 1 cut(s) 527
BsuRI GGCC 2 cut(s) 302, 616
BtgZI GCGATG 1 cut(s) 43
BtsIMutI CAGTG 1 cut(s) 345
BveI ACCTGC 1 cut(s) 546
Cac8I GCNNGC 2 cut(s) 354, 618
Cfr13I GGNCC 1 cut(s) 439
CseI GACGC 1 cut(s) 563
Csp6I GTAC 2 cut(s) 220, 289
CviAII CATG 2 cut(s) 98, 298
CviQI GTAC 2 cut(s) 220, 289
DdeI CTNAG 3 cut(s) 216, 285, 426
DpnI GATC 2 cut(s) 324, 510
DpnII GATC 2 cut(s) 322, 508
EaeI YGGCCR 1 cut(s) 300
Eam1104I CTCTTC 3 cut(s) 200, 411, 569
EarI CTCTTC 3 cut(s) 200, 411, 569
Ecl136II GAGCTC 1 cut(s) 91
Eco130I CCWWGG 2 cut(s) 244, 435
Eco24I GRGCYC 1 cut(s) 93
Eco31I GGTCTC 1 cut(s) 177
Eco47I GGWCC 1 cut(s) 439
Eco53kI GAGCTC 1 cut(s) 91
Eco72I CACGTG 1 cut(s) 581
EcoICRI GAGCTC 1 cut(s) 91
EcoO109I RGGNCCY 1 cut(s) 439
EcoRII CCWGG 1 cut(s) 44
EcoT14I CCWWGG 2 cut(s) 244, 435
EcoT38I GRGCYC 1 cut(s) 93
ErhI CCWWGG 2 cut(s) 244, 435
FaeI CATG 2 cut(s) 101, 301
FaiI YATR 5 cut(s) 99, 224, 237, 281, 299
FalI AAGNNNNNCTT 2 cut(s) 548, 580
FatI CATG 2 cut(s) 97, 297
FauI CCCGC 2 cut(s) 152, 532
FblI GTMKAC 1 cut(s) 450
FriOI GRGCYC 1 cut(s) 93
FspBI CTAG 1 cut(s) 459
GsaI CCCAGC 1 cut(s) 32
HaeIII GGCC 2 cut(s) 302, 616
HgaI GACGC 1 cut(s) 563
Hin1II CATG 2 cut(s) 101, 301
HindIII AAGCTT 1 cut(s) 350
HinfI GANTC 4 cut(s) 51, 200, 269, 529
HphI GGTGA 7 cut(s) 128, 221, 317, 500, 506, 559, 598
Hpy166II GTNNAC 2 cut(s) 451, 578
Hpy188I TCNGA 3 cut(s) 23, 545, 625
Hpy188III TCNNGA 1 cut(s) 204
Hpy8I GTNNAC 2 cut(s) 451, 578
HpyAV CCTTC 3 cut(s) 121, 266, 622
HpyCH4III ACNGT 1 cut(s) 116
HpyCH4IV ACGT 1 cut(s) 580
HpyCH4V TGCA 2 cut(s) 313, 413
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 299, 410, 431
HpyF3I CTNAG 3 cut(s) 216, 285, 426
HpySE526I ACGT 1 cut(s) 580
Hsp92II CATG 2 cut(s) 101, 301
Kzo9I GATC 2 cut(s) 322, 508
LguI GCTCTTC 2 cut(s) 200, 569
LmnI GCTCC 1 cut(s) 130
MaeI CTAG 1 cut(s) 459
MaeII ACGT 1 cut(s) 580
MalI GATC 2 cut(s) 324, 510
MboI GATC 2 cut(s) 322, 508
MboII GAAGA 6 cut(s) 187, 188, 332, 428, 503, 556
MhlI GDGCHC 2 cut(s) 93, 123
MlsI TGGCCA 1 cut(s) 302
MluNI TGGCCA 1 cut(s) 302
MlyI GAGTC 2 cut(s) 60, 263
MnlI CCTC 9 cut(s) 65, 74, 89, 149, 197, 412, 415, 448, 606
Mox20I TGGCCA 1 cut(s) 302
MroXI GAANNNNTTC 1 cut(s) 563
MscI TGGCCA 1 cut(s) 302
MslI CAYNNNNRTG 2 cut(s) 234, 308
Msp20I TGGCCA 1 cut(s) 302
MspR9I CCNGG 1 cut(s) 46
Mva1269I GAATGC 1 cut(s) 315
MvaI CCWGG 1 cut(s) 46
MvnI CGCG 1 cut(s) 527
MwoI GCNNNNNNNGC 4 cut(s) 38, 299, 410, 431
NdeII GATC 2 cut(s) 322, 508
NlaIII CATG 2 cut(s) 101, 301
NlaIV GGNNCC 3 cut(s) 132, 165, 250
NspV TTCGAA 1 cut(s) 198
PciSI GCTCTTC 2 cut(s) 200, 569
PcsI WCGNNNNNNNCGW 2 cut(s) 66, 99
PctI GAATGC 1 cut(s) 315
PdmI GAANNNNTTC 1 cut(s) 563
PfeI GAWTC 2 cut(s) 200, 529
PleI GAGTC 2 cut(s) 59, 263
PmaCI CACGTG 1 cut(s) 581
PmlI CACGTG 1 cut(s) 581
PpsI GAGTC 2 cut(s) 59, 263
Ppu21I YACGTR 1 cut(s) 581
PpuMI RGGWCCY 1 cut(s) 439
Psp124BI GAGCTC 1 cut(s) 93
Psp5II RGGWCCY 1 cut(s) 439
Psp6I CCWGG 1 cut(s) 44
PspCI CACGTG 1 cut(s) 581
PspFI CCCAGC 1 cut(s) 28
PspGI CCWGG 1 cut(s) 44
PspN4I GGNNCC 3 cut(s) 132, 165, 250
PspPI GGNCC 1 cut(s) 439
PspPPI RGGWCCY 1 cut(s) 439
RsaI GTAC 2 cut(s) 221, 290
RsaNI GTAC 2 cut(s) 220, 289
RseI CAYNNNNRTG 2 cut(s) 234, 308
SacI GAGCTC 1 cut(s) 93
SapI GCTCTTC 2 cut(s) 200, 569
Sau3AI GATC 2 cut(s) 322, 508
Sau96I GGNCC 1 cut(s) 439
SchI GAGTC 2 cut(s) 60, 263
ScrFI CCNGG 1 cut(s) 46
SduI GDGCHC 2 cut(s) 93, 123
SfuI TTCGAA 1 cut(s) 198
SinI GGWCC 1 cut(s) 439
SmiMI CAYNNNNRTG 2 cut(s) 234, 308
SmlI CTYRAG 2 cut(s) 188, 464
SmoI CTYRAG 2 cut(s) 188, 464
SsiI CCGC 2 cut(s) 145, 525
SspI AATATT 1 cut(s) 369
SspMI CTAG 1 cut(s) 459
SstI GAGCTC 1 cut(s) 93
StyD4I CCNGG 1 cut(s) 44
StyI CCWWGG 2 cut(s) 244, 435
TaaI ACNGT 1 cut(s) 116
TaiI ACGT 1 cut(s) 583
TaqI TCGA 4 cut(s) 81, 102, 198, 333
TatI WGTACW 1 cut(s) 219
TfiI GAWTC 2 cut(s) 200, 529
TscAI CASTG 1 cut(s) 345
TspDTI ATGAA 2 cut(s) 86, 252
TspRI CASTG 1 cut(s) 345
VpaK11BI GGWCC 1 cut(s) 439
XmiI GTMKAC 1 cut(s) 450
XmnI GAANNNNTTC 1 cut(s) 563
XspI CTAG 1 cut(s) 459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.