pycom03g22330
ERF Family

Belongs to the GST superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0003136
Physical Location & Seq
Reverse (-)
22462862 .. 22464001
1140 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g22330.2

Sequence Viewer

Length: 573 bp
ATGGCTGCCATCAAGGTCCACGGAAGCGTTTTTTCGACCGCTACAATTCGAGTTTTTGCTACTCTCTATGAGAAAGACATCGAGTTCGAGTTTGTTCCGATCGACATGGGAGCTGGTGAACACAAAAAGGAGGCAATTACACAATACCTTGCCCACGAGTATGCTGACAAGGGAACCCCGCTGGTGATCCGAGACTCGAAGAAGATGGCAATTATATCATTGTGGTCGGAGGTGGAGGGCCAAAAGTTCGACCCGGTGGCCTCAAAACTGGCCTTTGAGCTAGCTATAAAGCCTCTATTTAAAATGACCACAGACGCGGCAGTTGTGGAGGAAAATGAAGCCAAGTTGGCTGCTGTTCTTGATGTATATGAGACTCGTCTGGCTCAGTCGAAATACTTGGCAGGTGAAAACTTCACTTTGGCTGATCTTCACCACCTTCCCACTATACATTACTTGATGGGGACACAATCGAAGAAGCTGTTCGAATCCCGCCCCCATGTTAGCGCATGGGTAGCGGATATCACAGCAAGGCCAGCTTGGAACAAAGTCATTGCCCTGCGAAACAAGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_N

Protein Analysis

191

Amino Acids

21.33

Weight (kDa)

6.66

Isoelectric Point (pI)

31.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 392
Acc36I ACCTGC 1 cut(s) 392
AccII CGCG 1 cut(s) 317
AciI CCGC 5 cut(s) 39, 179, 317, 490, 515
AclWI GGATC 1 cut(s) 181
AfaI GTAC 1 cut(s) 569
AluBI AGCT 5 cut(s) 113, 280, 284, 478, 536
AluI AGCT 5 cut(s) 113, 280, 284, 478, 536
Alw26I GTCTC 2 cut(s) 186, 365
AlwI GGATC 1 cut(s) 181
AoxI GGCC 4 cut(s) 238, 258, 270, 530
ApeKI GCWGC 2 cut(s) 5, 350
ArsI GACNNNNNNTTYG 2 cut(s) 68, 100
Asp700I GAANNNNTTC 1 cut(s) 479
AspLEI GCGC 1 cut(s) 506
AspS9I GGNCC 2 cut(s) 16, 238
AsuC2I CCSGG 1 cut(s) 254
AsuHPI GGTGA 4 cut(s) 128, 196, 416, 422
AsuII TTCGAA 1 cut(s) 483
AsuNHI GCTAGC 1 cut(s) 280
AvaII GGWCC 1 cut(s) 16
BauI CACGAG 1 cut(s) 155
BbvI GCAGC 1 cut(s) 337
BccI CCATC 3 cut(s) 17, 199, 451
BcnI CCSGG 1 cut(s) 254
BcoDI GTCTC 2 cut(s) 186, 365
BfaI CTAG 1 cut(s) 281
BfuAI ACCTGC 1 cut(s) 392
BglI GCCNNNNNGGC 1 cut(s) 347
BisI GCNGC 3 cut(s) 6, 318, 351
BlsI GCNGC 3 cut(s) 7, 319, 352
BmcAI AGTACT 1 cut(s) 569
Bme1390I CCNGG 1 cut(s) 254
Bme18I GGWCC 1 cut(s) 16
BmgT120I GGNCC 2 cut(s) 16, 238
BmiI GGNNCC 1 cut(s) 175
BmrFI CCNGG 1 cut(s) 254
BmtI GCTAGC 1 cut(s) 284
Bpu14I TTCGAA 1 cut(s) 483
BpuMI CCSGG 1 cut(s) 254
BsaJI CCNNGG 1 cut(s) 19
Bse1I ACTGG 1 cut(s) 273
Bse3DI GCAATG 1 cut(s) 549
BseDI CCNNGG 1 cut(s) 19
BseMI GCAATG 1 cut(s) 549
BseMII CTCAG 1 cut(s) 398
BseNI ACTGG 1 cut(s) 273
BseXI GCAGC 1 cut(s) 337
Bsh1236I CGCG 1 cut(s) 317
Bsh1285I CGRYCG 2 cut(s) 39, 102
BshFI GGCC 4 cut(s) 240, 260, 272, 532
BsiEI CGRYCG 2 cut(s) 39, 102
BsiSI CCGG 1 cut(s) 254
BslFI GGGAC 1 cut(s) 475
BsmAI GTCTC 2 cut(s) 186, 365
BsmFI GGGAC 1 cut(s) 475
BsnI GGCC 4 cut(s) 240, 260, 272, 532
Bsp119I TTCGAA 1 cut(s) 483
Bsp143I GATC 3 cut(s) 99, 186, 424
BspACI CCGC 5 cut(s) 39, 179, 317, 490, 515
BspANI GGCC 4 cut(s) 240, 260, 272, 532
BspCNI CTCAG 1 cut(s) 397
BspFNI CGCG 1 cut(s) 317
BspLI GGNNCC 1 cut(s) 175
BspMI ACCTGC 1 cut(s) 392
BspOI GCTAGC 1 cut(s) 284
BspPI GGATC 1 cut(s) 181
BspT104I TTCGAA 1 cut(s) 483
BsrDI GCAATG 1 cut(s) 549
BsrI ACTGG 1 cut(s) 273
BssECI CCNNGG 1 cut(s) 19
BssMI GATC 3 cut(s) 99, 186, 424
BssSI CACGAG 1 cut(s) 155
Bst2BI CACGAG 1 cut(s) 155
BstBI TTCGAA 1 cut(s) 483
BstC8I GCNNGC 2 cut(s) 282, 534
BstDEI CTNAG 1 cut(s) 384
BstDSI CCRYGG 1 cut(s) 19
BstFNI CGCG 1 cut(s) 317
BstHHI GCGC 1 cut(s) 506
BstKTI GATC 3 cut(s) 102, 189, 427
BstMAI GTCTC 2 cut(s) 186, 365
BstMBI GATC 3 cut(s) 99, 186, 424
BstMCI CGRYCG 2 cut(s) 39, 102
BstMWI GCNNNNNNNGC 3 cut(s) 347, 512, 533
BstSCI CCNGG 1 cut(s) 252
BstUI CGCG 1 cut(s) 317
BstV1I GCAGC 1 cut(s) 337
BsuRI GGCC 4 cut(s) 240, 260, 272, 532
BtgI CCRYGG 1 cut(s) 19
BveI ACCTGC 1 cut(s) 392
Cac8I GCNNGC 2 cut(s) 282, 534
CfoI GCGC 1 cut(s) 506
Cfr13I GGNCC 2 cut(s) 16, 238
CseI GACGC 1 cut(s) 323
Csp6I GTAC 1 cut(s) 568
CviAII CATG 3 cut(s) 106, 497, 507
CviQI GTAC 1 cut(s) 568
DdeI CTNAG 1 cut(s) 384
DpnI GATC 3 cut(s) 101, 188, 426
DpnII GATC 3 cut(s) 99, 186, 424
DraI TTTAAA 1 cut(s) 301
Eco32I GATATC 1 cut(s) 520
Eco47I GGWCC 1 cut(s) 16
EcoRV GATATC 1 cut(s) 520
FaeI CATG 3 cut(s) 109, 500, 510
FalI AAGNNNNNCTT 2 cut(s) 520, 552
FaqI GGGAC 1 cut(s) 475
FatI CATG 3 cut(s) 105, 496, 506
FauI CCCGC 2 cut(s) 186, 497
Fnu4HI GCNGC 3 cut(s) 6, 318, 351
Fsp4HI GCNGC 3 cut(s) 6, 318, 351
FspBI CTAG 1 cut(s) 281
GlaI GCGC 1 cut(s) 505
GluI GCNGC 3 cut(s) 6, 318, 351
HaeIII GGCC 4 cut(s) 240, 260, 272, 532
HapII CCGG 1 cut(s) 254
HgaI GACGC 1 cut(s) 323
HhaI GCGC 1 cut(s) 506
Hin1II CATG 3 cut(s) 109, 500, 510
Hin6I GCGC 1 cut(s) 504
HinP1I GCGC 1 cut(s) 504
HinfI GANTC 3 cut(s) 194, 373, 485
HpaII CCGG 1 cut(s) 254
HphI GGTGA 4 cut(s) 128, 196, 416, 422
Hpy166II GTNNAC 2 cut(s) 19, 119
Hpy188I TCNGA 3 cut(s) 99, 191, 229
Hpy188III TCNNGA 1 cut(s) 359
Hpy8I GTNNAC 2 cut(s) 19, 119
HpyAV CCTTC 1 cut(s) 446
HpyF10VI GCNNNNNNNGC 3 cut(s) 347, 512, 533
HpyF3I CTNAG 1 cut(s) 384
Hsp92II CATG 3 cut(s) 109, 500, 510
HspAI GCGC 1 cut(s) 504
Kzo9I GATC 3 cut(s) 99, 186, 424
LmnI GCTCC 1 cut(s) 110
LpnPI CCDG 8 cut(s) 99, 167, 254, 267, 365, 387, 546, 569
Lsp1109I GCAGC 1 cut(s) 337
MaeI CTAG 1 cut(s) 281
MalI GATC 3 cut(s) 101, 188, 426
MboI GATC 3 cut(s) 99, 186, 424
MboII GAAGA 4 cut(s) 211, 214, 419, 484
MluCI AATT 3 cut(s) 45, 135, 210
MlyI GAGTC 2 cut(s) 188, 367
MmeI TCCRAC 1 cut(s) 207
MnlI CCTC 6 cut(s) 124, 223, 229, 271, 303, 322
MroXI GAANNNNTTC 1 cut(s) 479
MseI TTAA 1 cut(s) 300
MslI CAYNNNNRTG 1 cut(s) 159
MspA1I CMGCKG 1 cut(s) 181
MspI CCGG 1 cut(s) 254
MspR9I CCNGG 1 cut(s) 254
MvnI CGCG 1 cut(s) 317
MwoI GCNNNNNNNGC 3 cut(s) 347, 512, 533
NciI CCSGG 1 cut(s) 254
NdeII GATC 3 cut(s) 99, 186, 424
NheI GCTAGC 1 cut(s) 280
NlaIII CATG 3 cut(s) 109, 500, 510
NlaIV GGNNCC 1 cut(s) 175
NspV TTCGAA 1 cut(s) 483
PaqCI CACCTGC 1 cut(s) 392
PdmI GAANNNNTTC 1 cut(s) 479
PfeI GAWTC 1 cut(s) 485
PkrI GCNGC 3 cut(s) 7, 319, 352
Ple19I CGATCG 1 cut(s) 102
PleI GAGTC 2 cut(s) 188, 367
PpsI GAGTC 2 cut(s) 188, 367
PspN4I GGNNCC 1 cut(s) 175
PspPI GGNCC 2 cut(s) 16, 238
PvuI CGATCG 1 cut(s) 102
RsaI GTAC 1 cut(s) 569
RsaNI GTAC 1 cut(s) 568
RseI CAYNNNNRTG 1 cut(s) 159
SaqAI TTAA 1 cut(s) 300
SatI GCNGC 3 cut(s) 6, 318, 351
Sau3AI GATC 3 cut(s) 99, 186, 424
Sau96I GGNCC 2 cut(s) 16, 238
ScaI AGTACT 1 cut(s) 569
SchI GAGTC 2 cut(s) 188, 367
ScrFI CCNGG 1 cut(s) 254
SfuI TTCGAA 1 cut(s) 483
SinI GGWCC 1 cut(s) 16
SmiMI CAYNNNNRTG 1 cut(s) 159
Sse9I AATT 3 cut(s) 45, 135, 210
SsiI CCGC 5 cut(s) 39, 179, 317, 490, 515
SspMI CTAG 1 cut(s) 281
StyD4I CCNGG 1 cut(s) 252
TasI AATT 3 cut(s) 45, 135, 210
TatI WGTACW 1 cut(s) 567
TauI GCSGC 1 cut(s) 320
TfiI GAWTC 1 cut(s) 485
Tru1I TTAA 1 cut(s) 300
Tru9I TTAA 1 cut(s) 300
TseI GCWGC 2 cut(s) 5, 350
TspDTI ATGAA 1 cut(s) 351
TspGWI ACGGA 1 cut(s) 36
VpaK11BI GGWCC 1 cut(s) 16
XmnI GAANNNNTTC 1 cut(s) 479
XspI CTAG 1 cut(s) 281
ZrmI AGTACT 1 cut(s) 569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.