AT1G02930
ERF Family

Belongs to the GST superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0003136
Physical Location & Seq
Reverse (-)
661088 .. 662475
1388 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G02930.1

Sequence Viewer

Length: 627 bp
ATGGCAGGAATCAAAGTTTTCGGTCACCCAGCTTCCACAGCCACTAGAAGAGTTCTCATCGCTCTTCACGAGAAGAATGTCGACTTTGAATTCGTTCATGTCGAGCTCAAAGATGGTGAACACAAGAAAGAGCCTTTCATCCTTCGCAACCCCTTTGGTAAAGTTCCAGCCTTTGAAGATGGAGACTTCAAGATTTTCGAATCAAGAGCAATTACTCAATACATAGCTCATGAATTCTCAGACAAAGGAAACAACCTTCTCTCAACTGGCAAGGACATGGCGATCATAGCCATGGGCATTGAAATTGAGTCGCATGAGTTTGACCCAGTTGGTTCAAAGCTTGTTTGGGAGCAAGTCTTAAAGCCTTTGTATGGTATGACCACAGACAAAACCGTTGTTGAAGAAGAAGAGGCTAAGCTAGCCAAAGTCCTCGATGTTTACGAACACAGGCTTGGTGAGTCCAAGTATTTGGCTTCTGACCACTTCACTTTGGTCGATCTTCACACTATCCCTGTGATTCAATACTTACTTGGAACTCCAACTAAGAAACTCTTCGACGAGCGTCCACATGTGAGTGCTTGGGTTGCTGACATCACTTCAAGGCCTTCTGCTCAGAAGGTTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002239 GO:0002376 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005507 GO:0005515 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005911 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0006979 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009636 GO:0009651 GO:0009814 GO:0009817 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010043 GO:0010319 GO:0016020 GO:0016740 GO:0016765 GO:0019748 GO:0019904 GO:0030054 GO:0030312 GO:0031090 GO:0031967 GO:0031975 GO:0033218 GO:0034641 GO:0042221 GO:0042277 GO:0042742 GO:0043167 GO:0043168 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046686 GO:0046872 GO:0046914 GO:0048037 GO:0048046 GO:0050832 GO:0050896 GO:0050897 GO:0051186 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0072341 GO:0080167 GO:0097159 GO:0097243 GO:0097367 GO:0098542 GO:0098588 GO:0098754 GO:0098805 GO:1900750 GO:1901363 GO:1901564 GO:1901681 GO:1901700 GO:2001147 GO:2001227
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_N

Protein Analysis

208

Amino Acids

23.49

Weight (kDa)

5.8

Isoelectric Point (pI)

26.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 4 - 76 1.7e-21 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 7 - 81 2.9e-15 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 12 - 77 9.9e-13 Glutathione S-transferase, N-terminal domain
GST_C PF00043 120 - 202 2.2e-16 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 132 - 196 1.8e-06 Glutathione S-transferase, C-terminal domain
GST_C_3 PF14497 133 - 203 5.1e-08 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 81
AcsI RAATTY 2 cut(s) 89, 233
AfiI CCNNNNNNNGG 1 cut(s) 371
AflIII ACRYGT 1 cut(s) 568
AgsI TTSAA 8 cut(s) 89, 176, 190, 302, 336, 401, 521, 600
AjuI GAANNNNNNNTTGG 2 cut(s) 435, 467
AluBI AGCT 5 cut(s) 32, 106, 227, 340, 418
AluI AGCT 5 cut(s) 32, 106, 227, 340, 418
Alw21I GWGCWC 1 cut(s) 108
Alw26I GTCTC 1 cut(s) 177
AoxI GGCC 1 cut(s) 602
ApoI RAATTY 2 cut(s) 89, 233
ArsI GACNNNNNNTTYG 2 cut(s) 74, 106
Asp700I GAANNNNTTC 2 cut(s) 93, 551
AsuHPI GGTGA 3 cut(s) 17, 128, 467
AsuII TTCGAA 1 cut(s) 198
AsuNHI GCTAGC 1 cut(s) 418
BanII GRGCYC 1 cut(s) 108
BauI CACGAG 1 cut(s) 68
Bbv12I GWGCWC 1 cut(s) 108
BccI CCATC 2 cut(s) 107, 173
BcoDI GTCTC 1 cut(s) 177
BfaI CTAG 2 cut(s) 45, 419
BlpI GCTNAGC 1 cut(s) 414
BmrI ACTGGG 1 cut(s) 320
BmtI GCTAGC 1 cut(s) 422
BmuI ACTGGG 1 cut(s) 320
BoxI GACNNNNGTC 1 cut(s) 561
Bpu1102I GCTNAGC 1 cut(s) 414
Bpu14I TTCGAA 1 cut(s) 198
BsaJI CCNNGG 1 cut(s) 291
Bsc4I CCNNNNNNNGG 1 cut(s) 371
Bse1I ACTGG 2 cut(s) 271, 326
BseDI CCNNGG 1 cut(s) 291
BseGI GGATG 1 cut(s) 138
BseLI CCNNNNNNNGG 1 cut(s) 371
BseMII CTCAG 2 cut(s) 252, 626
BseNI ACTGG 2 cut(s) 271, 326
BseYI CCCAGC 1 cut(s) 28
BshFI GGCC 1 cut(s) 604
BsiHKAI GWGCWC 1 cut(s) 108
BslI CCNNNNNNNGG 1 cut(s) 371
BsmAI GTCTC 1 cut(s) 177
BsnI GGCC 1 cut(s) 604
Bsp119I TTCGAA 1 cut(s) 198
Bsp1286I GDGCHC 1 cut(s) 108
Bsp143I GATC 2 cut(s) 282, 496
Bsp1720I GCTNAGC 1 cut(s) 414
Bsp19I CCATGG 1 cut(s) 291
BspANI GGCC 1 cut(s) 604
BspCNI CTCAG 2 cut(s) 251, 625
BspHI TCATGA 1 cut(s) 229
BspOI GCTAGC 1 cut(s) 422
BspQI GCTCTTC 1 cut(s) 69
BspT104I TTCGAA 1 cut(s) 198
BsrI ACTGG 2 cut(s) 271, 326
BssECI CCNNGG 1 cut(s) 291
BssMI GATC 2 cut(s) 282, 496
BssSI CACGAG 1 cut(s) 68
BssT1I CCWWGG 1 cut(s) 291
Bst2BI CACGAG 1 cut(s) 68
Bst4CI ACNGT 1 cut(s) 394
Bst6I CTCTTC 4 cut(s) 43, 69, 402, 557
BstBI TTCGAA 1 cut(s) 198
BstC8I GCNNGC 1 cut(s) 420
BstDEI CTNAG 4 cut(s) 238, 414, 543, 612
BstDSI CCRYGG 1 cut(s) 291
BstEII GGTNACC 1 cut(s) 23
BstF5I GGATG 1 cut(s) 138
BstKTI GATC 2 cut(s) 285, 499
BstMAI GTCTC 1 cut(s) 177
BstMBI GATC 2 cut(s) 282, 496
BstMWI GCNNNNNNNGC 4 cut(s) 38, 287, 419, 584
BstNSI RCATGY 1 cut(s) 572
BstPAI GACNNNNGTC 1 cut(s) 561
BstPI GGTNACC 1 cut(s) 23
BstXI CCANNNNNNTGG 1 cut(s) 469
BsuRI GGCC 1 cut(s) 604
BtgI CCRYGG 1 cut(s) 291
BtgZI GCGATG 1 cut(s) 43
BtsCI GGATG 1 cut(s) 138
Cac8I GCNNGC 1 cut(s) 420
CciI TCATGA 1 cut(s) 229
CseI GACGC 1 cut(s) 551
CviAII CATG 6 cut(s) 98, 230, 277, 292, 314, 569
DdeI CTNAG 4 cut(s) 238, 414, 543, 612
DpnI GATC 2 cut(s) 284, 498
DpnII GATC 2 cut(s) 282, 496
Eam1104I CTCTTC 4 cut(s) 43, 69, 402, 557
EarI CTCTTC 4 cut(s) 43, 69, 402, 557
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 1 cut(s) 291
Eco147I AGGCCT 1 cut(s) 604
Eco24I GRGCYC 1 cut(s) 108
Eco53kI GAGCTC 1 cut(s) 106
Eco91I GGTNACC 1 cut(s) 23
EcoICRI GAGCTC 1 cut(s) 106
EcoO65I GGTNACC 1 cut(s) 23
EcoRI GAATTC 2 cut(s) 89, 233
EcoT14I CCWWGG 1 cut(s) 291
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 291
FaeI CATG 6 cut(s) 101, 233, 280, 295, 317, 572
FalI AAGNNNNNCTT 2 cut(s) 536, 568
FatI CATG 6 cut(s) 97, 229, 276, 291, 313, 568
FblI GTMKAC 1 cut(s) 81
FokI GGATG 1 cut(s) 125
FriOI GRGCYC 1 cut(s) 108
FspBI CTAG 2 cut(s) 45, 419
GsaI CCCAGC 1 cut(s) 32
HaeIII GGCC 1 cut(s) 604
HgaI GACGC 1 cut(s) 551
Hin1II CATG 6 cut(s) 101, 233, 280, 295, 317, 572
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HindIII AAGCTT 1 cut(s) 338
HinfI GANTC 5 cut(s) 9, 200, 308, 458, 517
HphI GGTGA 3 cut(s) 17, 128, 467
Hpy166II GTNNAC 4 cut(s) 82, 119, 439, 566
Hpy188I TCNGA 3 cut(s) 241, 478, 615
Hpy188III TCNNGA 4 cut(s) 68, 190, 204, 230
Hpy8I GTNNAC 4 cut(s) 82, 119, 439, 566
Hpy99I CGWCG 1 cut(s) 560
HpyAV CCTTC 4 cut(s) 152, 266, 610, 615
HpyCH4III ACNGT 1 cut(s) 394
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 287, 419, 584
HpyF3I CTNAG 4 cut(s) 238, 414, 543, 612
Hsp92II CATG 6 cut(s) 101, 233, 280, 295, 317, 572
Kzo9I GATC 2 cut(s) 282, 496
LguI GCTCTTC 1 cut(s) 69
LmnI GCTCC 1 cut(s) 349
LpnPI CCDG 6 cut(s) 42, 180, 252, 339, 433, 525
MaeI CTAG 2 cut(s) 45, 419
MaeIII GTNAC 1 cut(s) 23
MalI GATC 2 cut(s) 284, 498
MboI GATC 2 cut(s) 282, 496
MboII GAAGA 9 cut(s) 56, 60, 85, 188, 413, 416, 419, 491, 544
MhlI GDGCHC 1 cut(s) 108
MluCI AATT 4 cut(s) 89, 210, 233, 303
MlyI GAGTC 2 cut(s) 317, 467
MmeI TCCRAC 1 cut(s) 563
MnlI CCTC 2 cut(s) 403, 440
MroXI GAANNNNTTC 2 cut(s) 93, 551
MseI TTAA 2 cut(s) 359, 625
MslI CAYNNNNRTG 2 cut(s) 290, 573
MwoI GCNNNNNNNGC 4 cut(s) 38, 287, 419, 584
NcoI CCATGG 1 cut(s) 291
NdeII GATC 2 cut(s) 282, 496
NheI GCTAGC 1 cut(s) 418
NlaIII CATG 6 cut(s) 101, 233, 280, 295, 317, 572
NmuCI GTSAC 1 cut(s) 23
NspI RCATGY 1 cut(s) 572
NspV TTCGAA 1 cut(s) 198
PagI TCATGA 1 cut(s) 229
PceI AGGCCT 1 cut(s) 604
PciI ACATGT 1 cut(s) 568
PciSI GCTCTTC 1 cut(s) 69
PcsI WCGNNNNNNNCGW 3 cut(s) 66, 99, 438
PdmI GAANNNNTTC 2 cut(s) 93, 551
PfeI GAWTC 3 cut(s) 9, 200, 517
PleI GAGTC 2 cut(s) 316, 466
PpsI GAGTC 2 cut(s) 316, 466
PscI ACATGT 1 cut(s) 568
PshAI GACNNNNGTC 1 cut(s) 561
Psp124BI GAGCTC 1 cut(s) 108
PspEI GGTNACC 1 cut(s) 23
PspFI CCCAGC 1 cut(s) 28
RseI CAYNNNNRTG 2 cut(s) 290, 573
SacI GAGCTC 1 cut(s) 108
SalI GTCGAC 1 cut(s) 80
SapI GCTCTTC 1 cut(s) 69
SaqAI TTAA 2 cut(s) 359, 625
Sau3AI GATC 2 cut(s) 282, 496
SchI GAGTC 2 cut(s) 317, 467
SduI GDGCHC 1 cut(s) 108
SetI ASST 7 cut(s) 34, 108, 229, 258, 342, 420, 621
SfuI TTCGAA 1 cut(s) 198
SmiMI CAYNNNNRTG 2 cut(s) 290, 573
Sse9I AATT 4 cut(s) 89, 210, 233, 303
SseBI AGGCCT 1 cut(s) 604
SspMI CTAG 2 cut(s) 45, 419
SstI GAGCTC 1 cut(s) 108
StuI AGGCCT 1 cut(s) 604
StyI CCWWGG 1 cut(s) 291
TaaI ACNGT 1 cut(s) 394
TaqI TCGA 6 cut(s) 81, 102, 198, 432, 495, 555
TaqII GACCGA 1 cut(s) 11
TasI AATT 4 cut(s) 89, 210, 233, 303
TfiI GAWTC 3 cut(s) 9, 200, 517
Tru1I TTAA 2 cut(s) 359, 625
Tru9I TTAA 2 cut(s) 359, 625
TseFI GTSAC 1 cut(s) 23
Tsp45I GTSAC 1 cut(s) 23
TspDTI ATGAA 3 cut(s) 86, 127, 246
XapI RAATTY 2 cut(s) 89, 233
XceI RCATGY 1 cut(s) 572
XmiI GTMKAC 1 cut(s) 81
XmnI GAANNNNTTC 2 cut(s) 93, 551
XspI CTAG 2 cut(s) 45, 419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.