Rorug06G0234800
ERF Family

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001149
Physical Location & Seq
Reverse (-)
37758303 .. 37761410
3108 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0234800.1

Sequence Viewer

Length: 1932 bp
ATGTCGCTGACGAACGAAATCGCCACCGTAATGGAGAGCCTGGATCAGCTACCGGCGGCCCTACTCGCCACCATCCTGACGAAGCTCGACGTGTCCTCCATCTGCTCCGTCGCTTCCACCTGCACCGTCTTCAAGGCCTGCGCTCAACACATCCTCTCCTTCATCCCCTCCTTCCATCTCCTCGAAACTGCGCCTTCTATGGAATTGTTGAGGCCTCTGTTGCCGCCAAACCCTTGGCTGAAGACGATGAAGGTGAACTGCGGCCGGCTCGATGATTCGGCCATCCAGGTTCTGCTGCAGCCTTCTCTGCACGAGCTTTGCATGCTCAATTGCGCGGATTTTAGCGGCAAATTGCTCTCGGAGATCGGAGGCCGGTGCAAGGATTTGAGGTCTCTCTGCTTGGGGTCGGTCGCTGAAAAAAGAGGGCGAGCTATTCATATTTCTGATTTGGAGGAGTTACTCAGTGGTTGCACTCATTTAGAAGCATTGGTCCTGATGTTTGATGTCTCGTTTTCGCTGCGTCATGACTTTGCTCGAGTTTGGGCTTTGGCCTCTGAGAAACTCACTTCTCTTGAGATTGGCTACGTTTCATCTGTAATGGTGACTGAACTACTTAGCCCAAATTTCGAATTACCACAGTCAGCAAATCGTATTCAGCCTTCCATATTGCCTAATATTCATAAATTGTCCCTTTCTGTCGACTACATAACTGATGCCATGGTTGGTACTATATCTAAAGGTCTCACCTCCTTGACCCATTTGGATCTTCGAGATGCACCCCTCATTGAACCAAGAGTTACATTTGACCTTACCAACTCTGGCCTTCAATTGATAAATCAGCATGGAAAGTTGAAGCATTTATCATTGGTTCGGAGCCAGGAGTTTCTCTTCTCATATTTCAAACGAGTAAATGATCTTGGGCTCCTTTTATTAGCTGACAAGTGTGAAAAGATGGAAAGTATATTTCTCGGTGGCTTCTGTCGTGTTACAGACACAGGGTTCAAAACAATCTTGCATTCTTGCTCCACGCTCTACAAGCTTAGGGTGTCTCATGGGACTCAGTTAACTGATCTGGTTTTTCATGACATTTCTGCAACTTCCCTTTCTTTAACACACGTTAGCTTGAGACGGTGTACACTTTTAACCAACCATGCAGTCACTAATTTGGCTTCTAACAAGGATCTAAAAGTTCTTGATCTGAGAGATTGCAGAAACCTTGGGAATGAAGCCCTCCGAGCCATAGGCAATCTTCATAATTTGAAGACTTTATTATTGGATGGCTCCGATATCAGTGATCTGGGATTATCATACTTAAGACCAAGGGTTATAAGTTCACTAATTACATTGTCTGTTAGAGGCTGCAAGAAACTGACTGATAAATGCATCTCTGCTCTATTTGATGGCTCTTCTAAATTGGCGTTGCAAGAATTGGACCTATCAAATCTTCCGAATCTCTCTGACAATGGAGTTTTATTACTTGCAAGAAGTAGAATTCCGTTATTGGAACTACGAATGCGACAATGCCCACTCATAGGTGACACGTCTGTAGTGGTATTAGCTTCAATGCTGGTAGACGAGGAAAGGTGGCATGGTAATTGCTTGCGGTTGTTGGATCTGTTTAACTGTGGTGGCATTACCGCGGTTGCATTTCGGTGGCTGAAGAAACCATATTTTCCGAGGCTAAGGTGGTTGGGGGTTACAGGTTGTGTAAATAGAGATACAGTAGATGCTTTAGCTCGTAGTAGACCGTTCTTGCATGTGTCATGCCATGGTGAGGAGCTGGGGGCAGAGCAGTGGGATACCGGGGATGACTTTCATATGCATGACTATGATGAGATGGATGAGCTTGAACAGTGGCTTCAAGAAGGTGACTATGAGAGTGGCGATGAAGAGATGGTGGAGGCAGAAAACGTTGCAGAAGCAATGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00630 ko00910 ko01200 map00460 map00630 map00910 map01200
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

643

Amino Acids

71.43

Weight (kDa)

5.63

Isoelectric Point (pI)

43.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 62 - 596 9.4e-119 Leucine Rich Repeat Domain of unknown function (DUF7885)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1328
AarI CACCTGC 1 cut(s) 128
Acc36I ACCTGC 1 cut(s) 128
AccI GTMKAC 3 cut(s) 699, 1572, 1744
AccII CGCG 2 cut(s) 335, 1640
AciI CCGC 8 cut(s) 56, 224, 261, 335, 345, 1603, 1638, 1640
AclI AACGTT 1 cut(s) 1911
AclWI GGATC 4 cut(s) 51, 771, 1188, 1620
AcoI YGGCCR 2 cut(s) 262, 279
AcsI RAATTY 2 cut(s) 622, 1491
AcuI CTGAAG 2 cut(s) 260, 1679
AfaI GTAC 2 cut(s) 727, 1135
AfiI CCNNNNNNNGG 3 cut(s) 379, 1532, 1774
AflII CTTAAG 1 cut(s) 1312
AflIII ACRYGT 3 cut(s) 90, 1114, 1539
AjiI CACGTC 2 cut(s) 91, 1542
AjnI CCWGG 3 cut(s) 39, 285, 876
Alw26I GTCTC 5 cut(s) 396, 511, 746, 1053, 1120
AlwI GGATC 4 cut(s) 51, 771, 1188, 1620
AlwNI CAGNNNCTG 1 cut(s) 292
Ama87I CYCGRG 1 cut(s) 534
AoxI GGCC 8 cut(s) 57, 135, 212, 262, 279, 370, 549, 820
ApeKI GCWGC 4 cut(s) 295, 298, 517, 1359
ApoI RAATTY 2 cut(s) 622, 1491
AspLEI GCGC 3 cut(s) 143, 193, 335
AspS9I GGNCC 3 cut(s) 58, 490, 1432
AsuC2I CCSGG 1 cut(s) 1804
AsuHPI GGTGA 6 cut(s) 265, 613, 736, 1547, 1784, 1880
AsuII TTCGAA 1 cut(s) 627
AvaI CYCGRG 1 cut(s) 534
AvaII GGWCC 2 cut(s) 490, 1432
BanII GRGCYC 1 cut(s) 924
BarI GAAGNNNNNNTAC 2 cut(s) 643, 675
BauI CACGAG 1 cut(s) 311
BbsI GAAGAC 3 cut(s) 121, 248, 1268
BbvI GCAGC 4 cut(s) 282, 310, 504, 1346
BccI CCATC 9 cut(s) 80, 107, 183, 290, 946, 1271, 1394, 1831, 1888
BciT130I CCWGG 3 cut(s) 41, 287, 878
BciVI GTATCC 1 cut(s) 1792
BcnI CCSGG 1 cut(s) 1804
BcoDI GTCTC 5 cut(s) 396, 511, 746, 1053, 1120
BfmI CTRYAG 2 cut(s) 296, 1545
BfrI CTTAAG 1 cut(s) 1312
BfuAI ACCTGC 1 cut(s) 128
BfuI GTATCC 1 cut(s) 1792
BisI GCNGC 8 cut(s) 57, 224, 262, 296, 299, 346, 518, 1360
BlsI GCNGC 8 cut(s) 58, 225, 263, 297, 300, 347, 519, 1361
Bme1390I CCNGG 4 cut(s) 41, 287, 878, 1804
Bme18I GGWCC 2 cut(s) 490, 1432
BmeT110I CYCGRG 1 cut(s) 534
BmgBI CACGTC 2 cut(s) 91, 1542
BmgT120I GGNCC 3 cut(s) 58, 490, 1432
BmiI GGNNCC 3 cut(s) 875, 923, 1282
BmrFI CCNGG 4 cut(s) 41, 287, 878, 1804
BmsI GCATC 4 cut(s) 703, 763, 1392, 1717
BpiI GAAGAC 3 cut(s) 121, 248, 1268
Bpu10I CCTNAGC 2 cut(s) 1040, 1682
Bpu14I TTCGAA 1 cut(s) 627
BpuEI CTTGAG 2 cut(s) 593, 1144
BpuMI CCSGG 1 cut(s) 1804
BsaI GGTCTC 2 cut(s) 396, 746
BsaJI CCNNGG 8 cut(s) 233, 717, 1216, 1319, 1638, 1676, 1768, 1803
BsaXI ACNNNNNCTCC 4 cut(s) 80, 110, 140, 170
Bsc4I CCNNNNNNNGG 3 cut(s) 379, 1532, 1774
Bse118I RCCGGY 3 cut(s) 52, 264, 372
Bse3DI GCAATG 1 cut(s) 1929
BseBI CCWGG 3 cut(s) 41, 287, 878
BseDI CCNNGG 8 cut(s) 233, 717, 1216, 1319, 1638, 1676, 1768, 1803
BseGI GGATG 7 cut(s) 72, 150, 162, 282, 1282, 1813, 1846
BseLI CCNNNNNNNGG 3 cut(s) 379, 1532, 1774
BseMI GCAATG 1 cut(s) 1929
BseMII CTCAG 4 cut(s) 475, 546, 1073, 1190
BseRI GAGGAG 3 cut(s) 170, 467, 1790
BseX3I CGGCCG 1 cut(s) 262
BseXI GCAGC 4 cut(s) 282, 310, 504, 1346
BseYI CCCAGC 1 cut(s) 1780
BsgI GTGCAG 2 cut(s) 106, 293
Bsh1236I CGCG 2 cut(s) 335, 1640
Bsh1285I CGRYCG 2 cut(s) 265, 411
BshFI GGCC 8 cut(s) 59, 137, 214, 264, 281, 372, 551, 822
BsiEI CGRYCG 2 cut(s) 265, 411
BsiHKCI CYCGRG 1 cut(s) 534
BsiSI CCGG 4 cut(s) 53, 265, 373, 1803
BslFI GGGAC 2 cut(s) 673, 1069
BslI CCNNNNNNNGG 3 cut(s) 379, 1532, 1774
BsmAI GTCTC 5 cut(s) 396, 511, 746, 1053, 1120
BsmBI CGTCTC 1 cut(s) 1120
BsmFI GGGAC 2 cut(s) 673, 1069
BsmI GAATGC 2 cut(s) 1015, 1518
BsnI GGCC 8 cut(s) 59, 137, 214, 264, 281, 372, 551, 822
Bso31I GGTCTC 2 cut(s) 396, 746
BsoBI CYCGRG 1 cut(s) 534
Bsp119I TTCGAA 1 cut(s) 627
Bsp1286I GDGCHC 1 cut(s) 924
Bsp1407I TGTACA 1 cut(s) 1133
Bsp143I GATC 9 cut(s) 43, 363, 763, 913, 1069, 1180, 1195, 1294, 1612
Bsp19I CCATGG 2 cut(s) 717, 1768
BspACI CCGC 8 cut(s) 56, 224, 261, 335, 345, 1603, 1638, 1640
BspANI GGCC 8 cut(s) 59, 137, 214, 264, 281, 372, 551, 822
BspCNI CTCAG 4 cut(s) 474, 547, 1072, 1191
BspFNI CGCG 2 cut(s) 335, 1640
BspHI TCATGA 2 cut(s) 523, 1081
BspLI GGNNCC 3 cut(s) 875, 923, 1282
BspMAI CTGCAG 1 cut(s) 300
BspMI ACCTGC 1 cut(s) 128
BspPI GGATC 4 cut(s) 51, 771, 1188, 1620
BspQI GCTCTTC 1 cut(s) 1411
BspT104I TTCGAA 1 cut(s) 627
BspTI CTTAAG 1 cut(s) 1312
BspTNI GGTCTC 2 cut(s) 396, 746
BsrDI GCAATG 1 cut(s) 1929
BsrFI RCCGGY 3 cut(s) 52, 264, 372
BsrGI TGTACA 1 cut(s) 1133
BssAI RCCGGY 3 cut(s) 52, 264, 372
BssECI CCNNGG 8 cut(s) 233, 717, 1216, 1319, 1638, 1676, 1768, 1803
BssMI GATC 9 cut(s) 43, 363, 763, 913, 1069, 1180, 1195, 1294, 1612
BssSI CACGAG 1 cut(s) 311
BssT1I CCWWGG 5 cut(s) 233, 717, 1216, 1319, 1768
Bst2BI CACGAG 1 cut(s) 311
Bst2UI CCWGG 3 cut(s) 41, 287, 878
Bst4CI ACNGT 8 cut(s) 28, 127, 639, 1131, 1625, 1723, 1749, 1854
Bst6I CTCTTC 3 cut(s) 893, 1411, 1884
BstAFI CTTAAG 1 cut(s) 1312
BstAUI TGTACA 1 cut(s) 1133
BstBI TTCGAA 1 cut(s) 627
BstC8I GCNNGC 5 cut(s) 139, 266, 323, 429, 1601
BstDEI CTNAG 7 cut(s) 461, 555, 614, 1040, 1059, 1199, 1682
BstDSI CCRYGG 3 cut(s) 717, 1638, 1768
BstF5I GGATG 7 cut(s) 72, 150, 162, 282, 1282, 1813, 1846
BstFNI CGCG 2 cut(s) 335, 1640
BstHHI GCGC 3 cut(s) 143, 193, 335
BstKTI GATC 9 cut(s) 46, 366, 766, 916, 1072, 1183, 1198, 1297, 1615
BstMAI GTCTC 5 cut(s) 396, 511, 746, 1053, 1120
BstMBI GATC 9 cut(s) 43, 363, 763, 913, 1069, 1180, 1195, 1294, 1612
BstMCI CGRYCG 2 cut(s) 265, 411
BstMWI GCNNNNNNNGC 6 cut(s) 65, 220, 307, 322, 1036, 1235
BstNI CCWGG 3 cut(s) 41, 287, 878
BstNSI RCATGY 2 cut(s) 325, 1760
BstSCI CCNGG 4 cut(s) 39, 285, 876, 1802
BstSFI CTRYAG 2 cut(s) 296, 1545
BstUI CGCG 2 cut(s) 335, 1640
BstV1I GCAGC 4 cut(s) 282, 310, 504, 1346
BstV2I GAAGAC 3 cut(s) 121, 248, 1268
BstX2I RGATCY 3 cut(s) 763, 1180, 1612
BstXI CCANNNNNNTGG 2 cut(s) 31, 234
BstYI RGATCY 3 cut(s) 763, 1180, 1612
BstZI CGGCCG 1 cut(s) 262
BsuI GTATCC 1 cut(s) 1792
BsuRI GGCC 8 cut(s) 59, 137, 214, 264, 281, 372, 551, 822
BtgI CCRYGG 3 cut(s) 717, 1638, 1768
BtgZI GCGATG 1 cut(s) 1899
BtrI CACGTC 2 cut(s) 91, 1542
BtsCI GGATG 7 cut(s) 72, 150, 162, 282, 1282, 1813, 1846
BtsI GCAGTG 1 cut(s) 1799
BtsIMutI CAGTG 4 cut(s) 469, 1297, 1799, 1859
BveI ACCTGC 1 cut(s) 128
Cac8I GCNNGC 5 cut(s) 139, 266, 323, 429, 1601
CaiI CAGNNNCTG 1 cut(s) 292
CciI TCATGA 2 cut(s) 523, 1081
CfoI GCGC 3 cut(s) 143, 193, 335
Cfr10I RCCGGY 3 cut(s) 52, 264, 372
Cfr13I GGNCC 3 cut(s) 58, 490, 1432
Cfr42I CCGCGG 1 cut(s) 1641
CseI GACGC 1 cut(s) 509
Csp6I GTAC 2 cut(s) 726, 1134
CviQI GTAC 2 cut(s) 726, 1134
DdeI CTNAG 7 cut(s) 461, 555, 614, 1040, 1059, 1199, 1682
DpnI GATC 9 cut(s) 45, 365, 765, 915, 1071, 1182, 1197, 1296, 1614
DpnII GATC 9 cut(s) 43, 363, 763, 913, 1069, 1180, 1195, 1294, 1612
EaeI YGGCCR 2 cut(s) 262, 279
EagI CGGCCG 1 cut(s) 262
Eam1104I CTCTTC 3 cut(s) 893, 1411, 1884
EarI CTCTTC 3 cut(s) 893, 1411, 1884
EclXI CGGCCG 1 cut(s) 262
Eco130I CCWWGG 5 cut(s) 233, 717, 1216, 1319, 1768
Eco147I AGGCCT 2 cut(s) 137, 214
Eco24I GRGCYC 1 cut(s) 924
Eco31I GGTCTC 2 cut(s) 396, 746
Eco32I GATATC 1 cut(s) 1288
Eco47I GGWCC 2 cut(s) 490, 1432
Eco52I CGGCCG 1 cut(s) 262
Eco57I CTGAAG 2 cut(s) 260, 1679
Eco88I CYCGRG 1 cut(s) 534
EcoRI GAATTC 1 cut(s) 1491
EcoRII CCWGG 3 cut(s) 39, 285, 876
EcoRV GATATC 1 cut(s) 1288
EcoT14I CCWWGG 5 cut(s) 233, 717, 1216, 1319, 1768
EcoT22I ATGCAT 2 cut(s) 1385, 1824
EcoT38I GRGCYC 1 cut(s) 924
ErhI CCWWGG 5 cut(s) 233, 717, 1216, 1319, 1768
Esp3I CGTCTC 1 cut(s) 1120
FaqI GGGAC 2 cut(s) 673, 1069
FauNDI CATATG 1 cut(s) 1818
FblI GTMKAC 3 cut(s) 699, 1572, 1744
Fnu4HI GCNGC 8 cut(s) 57, 224, 262, 296, 299, 346, 518, 1360
FokI GGATG 7 cut(s) 59, 137, 149, 269, 1289, 1820, 1853
FriOI GRGCYC 1 cut(s) 924
Fsp4HI GCNGC 8 cut(s) 57, 224, 262, 296, 299, 346, 518, 1360
GlaI GCGC 3 cut(s) 142, 192, 334
GluI GCNGC 8 cut(s) 57, 224, 262, 296, 299, 346, 518, 1360
GsaI CCCAGC 1 cut(s) 1784
HaeIII GGCC 8 cut(s) 59, 137, 214, 264, 281, 372, 551, 822
HapII CCGG 4 cut(s) 53, 265, 373, 1803
HgaI GACGC 1 cut(s) 509
HhaI GCGC 3 cut(s) 143, 193, 335
Hin6I GCGC 3 cut(s) 141, 191, 333
HinP1I GCGC 3 cut(s) 141, 191, 333
HincII GTYRAC 2 cut(s) 700, 1065
HindII GTYRAC 2 cut(s) 700, 1065
HindIII AAGCTT 1 cut(s) 1037
HinfI GANTC 3 cut(s) 275, 1057, 1450
HpaI GTTAAC 1 cut(s) 1065
HpaII CCGG 4 cut(s) 53, 265, 373, 1803
HphI GGTGA 6 cut(s) 265, 613, 736, 1547, 1784, 1880
Hpy166II GTNNAC 8 cut(s) 256, 700, 1065, 1134, 1136, 1334, 1573, 1745
Hpy188III TCNNGA 8 cut(s) 76, 493, 524, 572, 770, 1082, 1193, 1862
Hpy8I GTNNAC 8 cut(s) 256, 700, 1065, 1134, 1136, 1334, 1573, 1745
Hpy99I CGWCG 2 cut(s) 92, 113
HpyAV CCTTC 8 cut(s) 169, 181, 204, 244, 312, 669, 833, 1859
HpyCH4III ACNGT 8 cut(s) 28, 127, 639, 1131, 1625, 1723, 1749, 1854
HpyCH4IV ACGT 5 cut(s) 90, 585, 1116, 1541, 1911
HpyF10VI GCNNNNNNNGC 6 cut(s) 65, 220, 307, 322, 1036, 1235
HpyF3I CTNAG 7 cut(s) 461, 555, 614, 1040, 1059, 1199, 1682
HpySE526I ACGT 5 cut(s) 90, 585, 1116, 1541, 1911
HspAI GCGC 3 cut(s) 141, 191, 333
KroI GCCGGC 1 cut(s) 264
KroNI GCCGGC 1 cut(s) 266
KspAI GTTAAC 1 cut(s) 1065
KspI CCGCGG 1 cut(s) 1641
Kzo9I GATC 9 cut(s) 43, 363, 763, 913, 1069, 1180, 1195, 1294, 1612
LguI GCTCTTC 1 cut(s) 1411
LmnI GCTCC 6 cut(s) 110, 873, 927, 1028, 1286, 1777
Lsp1109I GCAGC 4 cut(s) 282, 310, 504, 1346
LweI GCATC 4 cut(s) 703, 763, 1392, 1717
MaeII ACGT 5 cut(s) 90, 585, 1116, 1541, 1911
MaeIII GTNAC 8 cut(s) 456, 601, 796, 985, 1156, 1535, 1696, 1868
MalI GATC 9 cut(s) 45, 365, 765, 915, 1071, 1182, 1197, 1296, 1614
MboI GATC 9 cut(s) 43, 363, 763, 913, 1069, 1180, 1195, 1294, 1612
MfeI CAATTG 2 cut(s) 328, 827
MflI RGATCY 3 cut(s) 763, 1180, 1612
MhlI GDGCHC 1 cut(s) 924
MlyI GAGTC 1 cut(s) 1051
MmeI TCCRAC 1 cut(s) 1590
Mph1103I ATGCAT 2 cut(s) 1385, 1824
MroNI GCCGGC 1 cut(s) 264
MseI TTAA 5 cut(s) 1064, 1109, 1142, 1313, 1620
MslI CAYNNNNRTG 4 cut(s) 29, 1651, 1821, 1827
MspA1I CMGCKG 1 cut(s) 1640
MspCI CTTAAG 1 cut(s) 1312
MspI CCGG 4 cut(s) 53, 265, 373, 1803
MspR9I CCNGG 4 cut(s) 41, 287, 878, 1804
MunI CAATTG 2 cut(s) 328, 827
Mva1269I GAATGC 2 cut(s) 1015, 1518
MvaI CCWGG 3 cut(s) 41, 287, 878
MvnI CGCG 2 cut(s) 335, 1640
MwoI GCNNNNNNNGC 6 cut(s) 65, 220, 307, 322, 1036, 1235
NaeI GCCGGC 1 cut(s) 266
NciI CCSGG 1 cut(s) 1804
NcoI CCATGG 2 cut(s) 717, 1768
NdeI CATATG 1 cut(s) 1818
NdeII GATC 9 cut(s) 43, 363, 763, 913, 1069, 1180, 1195, 1294, 1612
NgoMIV GCCGGC 1 cut(s) 264
NlaIV GGNNCC 3 cut(s) 875, 923, 1282
NmuCI GTSAC 4 cut(s) 601, 1156, 1535, 1868
NsiI ATGCAT 2 cut(s) 1385, 1824
NspI RCATGY 2 cut(s) 325, 1760
NspV TTCGAA 1 cut(s) 627
PaeI GCATGC 1 cut(s) 325
PaeR7I CTCGAG 1 cut(s) 534
PagI TCATGA 2 cut(s) 523, 1081
PaqCI CACCTGC 1 cut(s) 128
PceI AGGCCT 2 cut(s) 137, 214
PciSI GCTCTTC 1 cut(s) 1411
PctI GAATGC 2 cut(s) 1015, 1518
PdiI GCCGGC 1 cut(s) 266
PfeI GAWTC 2 cut(s) 275, 1450
PkrI GCNGC 8 cut(s) 58, 225, 263, 297, 300, 347, 519, 1361
PleI GAGTC 1 cut(s) 1051
PpsI GAGTC 1 cut(s) 1051
PsiI TTATAA 1 cut(s) 1328
Psp1406I AACGTT 1 cut(s) 1911
Psp6I CCWGG 3 cut(s) 39, 285, 876
PspFI CCCAGC 1 cut(s) 1780
PspGI CCWGG 3 cut(s) 39, 285, 876
PspN4I GGNNCC 3 cut(s) 875, 923, 1282
PspPI GGNCC 3 cut(s) 58, 490, 1432
PspXI VCTCGAGB 1 cut(s) 534
PstI CTGCAG 1 cut(s) 300
PstNI CAGNNNCTG 1 cut(s) 292
PsuI RGATCY 3 cut(s) 763, 1180, 1612
RsaI GTAC 2 cut(s) 727, 1135
RsaNI GTAC 2 cut(s) 726, 1134
RseI CAYNNNNRTG 4 cut(s) 29, 1651, 1821, 1827
SacII CCGCGG 1 cut(s) 1641
SalI GTCGAC 1 cut(s) 698
SapI GCTCTTC 1 cut(s) 1411
SaqAI TTAA 5 cut(s) 1064, 1109, 1142, 1313, 1620
SatI GCNGC 8 cut(s) 57, 224, 262, 296, 299, 346, 518, 1360
Sau3AI GATC 9 cut(s) 43, 363, 763, 913, 1069, 1180, 1195, 1294, 1612
Sau96I GGNCC 3 cut(s) 58, 490, 1432
SchI GAGTC 1 cut(s) 1051
ScrFI CCNGG 4 cut(s) 41, 287, 878, 1804
SduI GDGCHC 1 cut(s) 924
SfaNI GCATC 4 cut(s) 703, 763, 1392, 1717
SfcI CTRYAG 2 cut(s) 296, 1545
Sfr274I CTCGAG 1 cut(s) 534
Sfr303I CCGCGG 1 cut(s) 1641
SfuI TTCGAA 1 cut(s) 627
SgrBI CCGCGG 1 cut(s) 1641
SinI GGWCC 2 cut(s) 490, 1432
SlaI CTCGAG 1 cut(s) 534
SmiMI CAYNNNNRTG 4 cut(s) 29, 1651, 1821, 1827
SmlI CTYRAG 4 cut(s) 534, 572, 1123, 1312
SmoI CTYRAG 4 cut(s) 534, 572, 1123, 1312
SphI GCATGC 1 cut(s) 325
SseBI AGGCCT 2 cut(s) 137, 214
SsiI CCGC 8 cut(s) 56, 224, 261, 335, 345, 1603, 1638, 1640
SspI AATATT 1 cut(s) 676
StuI AGGCCT 2 cut(s) 137, 214
StyD4I CCNGG 4 cut(s) 39, 285, 876, 1802
StyI CCWWGG 5 cut(s) 233, 717, 1216, 1319, 1768
TaaI ACNGT 8 cut(s) 28, 127, 639, 1131, 1625, 1723, 1749, 1854
TaiI ACGT 5 cut(s) 93, 588, 1119, 1544, 1914
TaqI TCGA 7 cut(s) 87, 183, 270, 535, 627, 699, 769
TaqII GACCGA 1 cut(s) 397
TatI WGTACW 1 cut(s) 1133
TauI GCSGC 4 cut(s) 59, 226, 264, 348
TfiI GAWTC 2 cut(s) 275, 1450
Tru1I TTAA 5 cut(s) 1064, 1109, 1142, 1313, 1620
Tru9I TTAA 5 cut(s) 1064, 1109, 1142, 1313, 1620
TscAI CASTG 4 cut(s) 469, 1297, 1799, 1859
TseFI GTSAC 4 cut(s) 601, 1156, 1535, 1868
TseI GCWGC 4 cut(s) 295, 298, 517, 1359
Tsp45I GTSAC 4 cut(s) 601, 1156, 1535, 1868
TspGWI ACGGA 2 cut(s) 97, 1485
TspRI CASTG 4 cut(s) 469, 1297, 1799, 1859
Vha464I CTTAAG 1 cut(s) 1312
VpaK11BI GGWCC 2 cut(s) 490, 1432
XapI RAATTY 2 cut(s) 622, 1491
XceI RCATGY 2 cut(s) 325, 1760
XhoI CTCGAG 1 cut(s) 534
XmiI GTMKAC 3 cut(s) 699, 1572, 1744
Zsp2I ATGCAT 2 cut(s) 1385, 1824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.