Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001149

Physical Location & Seq

Genomic Coordinates Reverse (-)

11748015 .. 11750488

Gene Structure 2474 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G27490.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 699 bp

ATGAGAATAGTCGGGTTAACGGGAGGCATAGCGTCTGGGAAGAGTACAGTGTCTAACCTCTTCAAGGCTAGTGGCATTCCCGTTGTTGACGCTGATGTTGTTGCTCGAGATGTATTGAAGAAAGGAAGCGGTGGATGGAAAAGAGTCGTTGCAGCTTTTGGTGAGGAGATTCTGCTTCCTAGTGGAGAAGTGGATCGGCCAAAACTCGGTCAGATTGTGTTCTCGTCTGATTCCAAGCGTCAACTTCTAAACAAGCTGATGGCTCCATACATATCAAGTGGTATCTTCTGGGAAATTCTGAAACAATGGGCGAGTGGAGCTAAAGTGATAGTTGTCGATATCCCTTTGTTGTTCGAAGTGAAGATGGATAAATGGACTAAACCTATTGTGGTTGTGTGGGTTAGTCAAGAGACACAACTTAAGAGACTGATGGAGAGAGATGGATTGAGTGAGGAAGATGCAAGAAACAGAGTGATGGCTCAGATGCCGTTGGATTCGAAAAGAAGCAAAGCTGATGTTGTGATCGATAATAATGGCTCTCTTGACGACCTTCACCAACAGTTCGAGAAGGTTTTGATTGAAATTAGAAGACCATTGACGTGGATCGAGTTTTGGCGTTCAAGGCAAGGAGCCTTCTCGGTCCTTGGTTCAGTGATTTTAGGATTATCTGTTTGCAAACAGCTCAAAATTGGCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004140 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005777 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009507 GO:0009536 GO:0009987 GO:0015936 GO:0015937 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046390 GO:0046483 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00770 ko01100 map00770 map01100

Pfam Domains

Protein Families

CoaE

Protein Analysis

232

Amino Acids

25.75

Weight (kDa)

9.54

Isoelectric Point (pI)

40.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CoaE	PF01121	3 - 182	1.6e-61	Dephospho-CoA kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0001149)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27490 AT2G27490 AT2G27490 AT2G27490
fragaria_vesca	FvH4_2g25231 FvH4_3g05410 FvH4_3g05411 FvH4_7g06070 FvH4_7g06070
malus_domestica	MD11G1303900.v1.1 MD12G1063200.v1.1
prunus_persica	Prupe.8G257100_v2.0.a1
pyrus_communis	pycom03g22320 pycom11g26540
rosa_chinensis	RchiOBHm_Chr1g0333581 RchiOBHm_Chr1g0334201 RchiOBHm_Chr4g0419041 RchiOBHm_Chr5g0006471 RchiOBHm_Chr6g0258301 RchiOBHm_Chr6g0293371 RchiOBHm_Chr7g0221651
rosa_laevigata	RLG00000002140 RLG00000002141 RLG00000002148 RLG00000011952 RLG00000014623 RLG00000029551 RLG00000029602
rosa_multiflora	Rmu_sc0002955.1_g000014 Rmu_sc0005016.1_g000035 Rmu_sc0006269.1_g000029 Rmu_sc0007367.1_g000008
rosa_roxburghii	Rroxscaffold_178G00437330 Rroxscaffold_3G00238150 Rroxscaffold_7G00174220
rosa_rugosa	Rorug04G0156600 Rorug05G0580800 Rorug06G0234800 Rorug06G0234900 Rorug07G0202700
rosa_samantha	Rh1CG126800 Rh1CG129700 Rh1DG138000 Rh1DG138900 Rh1DG139400 Rh4AG218200 Rh6BG355400 Rh6CG361500 Rh6DG348600 Rh7AG343200 Rh7BG333300
rosa_wichuraiana	Rw0G017990 Rw1G010970 Rw1G011030 Rw1G011070 Rw6G008420 Rw6G030260 Rw7G029110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	129
AclWI	GGATC	2 cut(s)	201, 611
AcoI	YGGCCR	1 cut(s)	197
AcsI	RAATTY	1 cut(s)	294
AfaI	GTAC	1 cut(s)	46
AfiI	CCNNNNNNNGG	2 cut(s)	64, 206
AflII	CTTAAG	1 cut(s)	419
AgsI	TTSAA	4 cut(s)	64, 118, 581, 621
AjiI	CACGTC	1 cut(s)	600
AluBI	AGCT	5 cut(s)	155, 256, 320, 512, 682
AluI	AGCT	5 cut(s)	155, 256, 320, 512, 682
Alw26I	GTCTC	2 cut(s)	404, 418
AlwI	GGATC	2 cut(s)	201, 611
Ama87I	CYCGRG	1 cut(s)	105
AoxI	GGCC	1 cut(s)	197
ApeKI	GCWGC	1 cut(s)	152
ApoI	RAATTY	1 cut(s)	294
AspS9I	GGNCC	1 cut(s)	640
AsuHPI	GGTGA	2 cut(s)	173, 545
AsuII	TTCGAA	2 cut(s)	354, 497
AvaI	CYCGRG	1 cut(s)	105
AvaII	GGWCC	1 cut(s)	640
BbsI	GAAGAC	1 cut(s)	595
BbvI	GCAGC	1 cut(s)	164
BccI	CCATC	6 cut(s)	129, 253, 358, 424, 434, 469
BceAI	ACGGC	1 cut(s)	472
BcoDI	GTCTC	2 cut(s)	404, 418
BfaI	CTAG	2 cut(s)	69, 180
BfrI	CTTAAG	1 cut(s)	419
BisI	GCNGC	1 cut(s)	153
BlsI	GCNGC	1 cut(s)	154
Bme18I	GGWCC	1 cut(s)	640
BmeT110I	CYCGRG	1 cut(s)	105
BmgBI	CACGTC	1 cut(s)	600
BmgT120I	GGNCC	1 cut(s)	640
BmiI	GGNNCC	2 cut(s)	264, 631
BmsI	GCATC	2 cut(s)	448, 474
BpiI	GAAGAC	1 cut(s)	595
Bpu14I	TTCGAA	2 cut(s)	354, 497
Bsa29I	ATCGAT	1 cut(s)	525
BsaJI	CCNNGG	1 cut(s)	643
BsaXI	ACNNNNNCTCC	2 cut(s)	309, 339
Bsc4I	CCNNNNNNNGG	2 cut(s)	64, 206
BseCI	ATCGAT	1 cut(s)	525
BseDI	CCNNGG	1 cut(s)	643
BseGI	GGATG	1 cut(s)	140
BseLI	CCNNNNNNNGG	2 cut(s)	64, 206
BseMII	CTCAG	1 cut(s)	494
BseRI	GAGGAG	1 cut(s)	179
BseXI	GCAGC	1 cut(s)	164
BshFI	GGCC	1 cut(s)	199
BshVI	ATCGAT	1 cut(s)	525
BsiHKCI	CYCGRG	1 cut(s)	105
BslI	CCNNNNNNNGG	2 cut(s)	64, 206
BsmAI	GTCTC	2 cut(s)	404, 418
BsmI	GAATGC	1 cut(s)	75
BsnI	GGCC	1 cut(s)	199
BsoBI	CYCGRG	1 cut(s)	105
Bsp119I	TTCGAA	2 cut(s)	354, 497
Bsp143I	GATC	3 cut(s)	193, 522, 603
BspACI	CCGC	1 cut(s)	129
BspANI	GGCC	1 cut(s)	199
BspCNI	CTCAG	1 cut(s)	493
BspDI	ATCGAT	1 cut(s)	525
BspLI	GGNNCC	2 cut(s)	264, 631
BspPI	GGATC	2 cut(s)	201, 611
BspT104I	TTCGAA	2 cut(s)	354, 497
BspTI	CTTAAG	1 cut(s)	419
BssECI	CCNNGG	1 cut(s)	643
BssMI	GATC	3 cut(s)	193, 522, 603
BssT1I	CCWWGG	1 cut(s)	643
Bst4CI	ACNGT	2 cut(s)	49, 561
Bst6I	CTCTTC	2 cut(s)	35, 65
BstAFI	CTTAAG	1 cut(s)	419
BstBI	TTCGAA	2 cut(s)	354, 497
BstDEI	CTNAG	1 cut(s)	480
BstENI	CCTNNNNNAGG	1 cut(s)	62
BstF5I	GGATG	1 cut(s)	140
BstKTI	GATC	3 cut(s)	196, 525, 606
BstMAI	GTCTC	2 cut(s)	404, 418
BstMBI	GATC	3 cut(s)	193, 522, 603
BstMWI	GCNNNNNNNGC	2 cut(s)	317, 622
BstV1I	GCAGC	1 cut(s)	164
BstV2I	GAAGAC	1 cut(s)	595
BstXI	CCANNNNNNTGG	1 cut(s)	600
Bsu15I	ATCGAT	1 cut(s)	525
BsuRI	GGCC	1 cut(s)	199
BsuTUI	ATCGAT	1 cut(s)	525
BtrI	CACGTC	1 cut(s)	600
BtsCI	GGATG	1 cut(s)	140
BtsIMutI	CAGTG	2 cut(s)	54, 657
Cfr13I	GGNCC	1 cut(s)	640
ClaI	ATCGAT	1 cut(s)	525
CseI	GACGC	3 cut(s)	21, 98, 227
Csp6I	GTAC	1 cut(s)	45
CspCI	CAANNNNNGTGG	2 cut(s)	52, 87
CviQI	GTAC	1 cut(s)	45
DdeI	CTNAG	1 cut(s)	480
DpnI	GATC	3 cut(s)	195, 524, 605
DpnII	GATC	3 cut(s)	193, 522, 603
EaeI	YGGCCR	1 cut(s)	197
Eam1104I	CTCTTC	2 cut(s)	35, 65
EarI	CTCTTC	2 cut(s)	35, 65
Eco130I	CCWWGG	1 cut(s)	643
Eco32I	GATATC	1 cut(s)	340
Eco47I	GGWCC	1 cut(s)	640
Eco88I	CYCGRG	1 cut(s)	105
EcoNI	CCTNNNNNAGG	1 cut(s)	62
EcoRV	GATATC	1 cut(s)	340
EcoT14I	CCWWGG	1 cut(s)	643
ErhI	CCWWGG	1 cut(s)	643
FaiI	YATR	3 cut(s)	29, 268, 272
Fnu4HI	GCNGC	1 cut(s)	153
FokI	GGATG	1 cut(s)	147
Fsp4HI	GCNGC	1 cut(s)	153
FspBI	CTAG	2 cut(s)	69, 180
GluI	GCNGC	1 cut(s)	153
HaeIII	GGCC	1 cut(s)	199
HgaI	GACGC	3 cut(s)	21, 98, 227
HincII	GTYRAC	3 cut(s)	18, 88, 242
HindII	GTYRAC	3 cut(s)	18, 88, 242
HinfI	GANTC	4 cut(s)	144, 169, 230, 494
HpaI	GTTAAC	1 cut(s)	18
HphI	GGTGA	2 cut(s)	173, 545
Hpy166II	GTNNAC	3 cut(s)	18, 88, 242
Hpy188I	TCNGA	4 cut(s)	213, 229, 300, 483
Hpy188III	TCNNGA	4 cut(s)	107, 407, 542, 565
Hpy8I	GTNNAC	3 cut(s)	18, 88, 242
HpyAV	CCTTC	3 cut(s)	560, 562, 643
HpyCH4III	ACNGT	2 cut(s)	49, 561
HpyCH4IV	ACGT	1 cut(s)	599
HpyCH4V	TGCA	3 cut(s)	152, 461, 675
HpyF10VI	GCNNNNNNNGC	2 cut(s)	317, 622
HpyF3I	CTNAG	1 cut(s)	480
HpySE526I	ACGT	1 cut(s)	599
KspAI	GTTAAC	1 cut(s)	18
Kzo9I	GATC	3 cut(s)	193, 522, 603
LmnI	GCTCC	3 cut(s)	268, 317, 629
LpnPI	CCDG	2 cut(s)	21, 274
Lsp1109I	GCAGC	1 cut(s)	164
LweI	GCATC	2 cut(s)	448, 474
MaeI	CTAG	2 cut(s)	69, 180
MaeII	ACGT	1 cut(s)	599
MalI	GATC	3 cut(s)	195, 524, 605
MboI	GATC	3 cut(s)	193, 522, 603
MboII	GAAGA	7 cut(s)	52, 52, 130, 277, 373, 467, 600
MluCI	AATT	3 cut(s)	294, 582, 687
MlyI	GAGTC	1 cut(s)	153
MmeI	TCCRAC	1 cut(s)	471
MnlI	CCTC	4 cut(s)	17, 68, 157, 445
MseI	TTAA	3 cut(s)	17, 420, 697
MslI	CAYNNNNRTG	1 cut(s)	598
MspCI	CTTAAG	1 cut(s)	419
Mva1269I	GAATGC	1 cut(s)	75
MwoI	GCNNNNNNNGC	2 cut(s)	317, 622
NdeII	GATC	3 cut(s)	193, 522, 603
NlaIV	GGNNCC	2 cut(s)	264, 631
NspV	TTCGAA	2 cut(s)	354, 497
PaeR7I	CTCGAG	1 cut(s)	105
PctI	GAATGC	1 cut(s)	75
PfeI	GAWTC	3 cut(s)	169, 230, 494
PkrI	GCNGC	1 cut(s)	154
PleI	GAGTC	1 cut(s)	152
PpsI	GAGTC	1 cut(s)	152
PspN4I	GGNNCC	2 cut(s)	264, 631
PspPI	GGNCC	1 cut(s)	640
RsaI	GTAC	1 cut(s)	46
RsaNI	GTAC	1 cut(s)	45
RseI	CAYNNNNRTG	1 cut(s)	598
SaqAI	TTAA	3 cut(s)	17, 420, 697
SatI	GCNGC	1 cut(s)	153
Sau3AI	GATC	3 cut(s)	193, 522, 603
Sau96I	GGNCC	1 cut(s)	640
SchI	GAGTC	1 cut(s)	153
SfaNI	GCATC	2 cut(s)	448, 474
Sfr274I	CTCGAG	1 cut(s)	105
SfuI	TTCGAA	2 cut(s)	354, 497
SinI	GGWCC	1 cut(s)	640
SlaI	CTCGAG	1 cut(s)	105
SmiMI	CAYNNNNRTG	1 cut(s)	598
SmlI	CTYRAG	2 cut(s)	105, 419
SmoI	CTYRAG	2 cut(s)	105, 419
Sse9I	AATT	3 cut(s)	294, 582, 687
SsiI	CCGC	1 cut(s)	129
SspMI	CTAG	2 cut(s)	69, 180
StyI	CCWWGG	1 cut(s)	643
TaaI	ACNGT	2 cut(s)	49, 561
TaiI	ACGT	1 cut(s)	602
TaqI	TCGA	7 cut(s)	106, 336, 354, 497, 525, 564, 606
TaqII	GACCGA	2 cut(s)	197, 628
TasI	AATT	3 cut(s)	294, 582, 687
TatI	WGTACW	1 cut(s)	44
TfiI	GAWTC	3 cut(s)	169, 230, 494
Tru1I	TTAA	3 cut(s)	17, 420, 697
Tru9I	TTAA	3 cut(s)	17, 420, 697
TscAI	CASTG	2 cut(s)	54, 657
TseI	GCWGC	1 cut(s)	152
TspRI	CASTG	2 cut(s)	54, 657
Vha464I	CTTAAG	1 cut(s)	419
VpaK11BI	GGWCC	1 cut(s)	640
XagI	CCTNNNNNAGG	1 cut(s)	62
XapI	RAATTY	1 cut(s)	294
XhoI	CTCGAG	1 cut(s)	105
XspI	CTAG	2 cut(s)	69, 180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.