RLG00000002148

Dephospho-CoA kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
26302265 .. 26303345
1081 bp
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UTR
Exon/CDS
Intron
RLM00000002148

Sequence Viewer

Length: 516 bp
ATGAGGATAGTGGGACTGACAGGTGGGATTTCATCTGGGAAAAGTACTGTCTCAAATCTCTTCAAGGCCCATGACATTCCTGTTGTCGATGCCGATCTTGTGGCTCGTGATATATTGAAGAAGGGCACTGGCGGATGGAAAAGGATTGTTTCAGCATTTGGGCAGGGTGTTTTGCTACCTGATGGAGAAGTTGATAGACCTAAACTAGGACAAATTGTATTCTCTAATCCCGAAAAGCGTCAACTTTTGAACTGGTATGTACATTCTCGCAGATTACCTAATTTTATTATACTACTGGCTCCTTACATATCATCTGGAATCTTTTGGGAAATTTGGAAGCTATGGTTGAAGGGGTTTGAGGTTCTTCTTGATGTCCCTCTATTGTTCGAGGCCAAGATTGACAGATGGACCAAGCCTGTTATTGTTGTATGGGTCGATCCTGAAACACAGCTCCAGAGACTCATGTTGAGGGACAGAACAAGTGAGAATGTTGCTCGAAAACGGATAAATGCTTAA

Protein Analysis

172

Amino Acids

19.47

Weight (kDa)

9.98

Isoelectric Point (pI)

28.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CoaE PF01121 3 - 171 3.3e-44 Dephospho-CoA kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 132
AclWI GGATC 1 cut(s) 431
AcsI RAATTY 1 cut(s) 330
AfaI GTAC 2 cut(s) 46, 261
AfiI CCNNNNNNNGG 1 cut(s) 206
AgsI TTSAA 4 cut(s) 64, 118, 250, 349
AluBI AGCT 2 cut(s) 340, 451
AluI AGCT 2 cut(s) 340, 451
Alw26I GTCTC 2 cut(s) 55, 451
AlwI GGATC 1 cut(s) 431
AoxI GGCC 2 cut(s) 66, 390
ApoI RAATTY 1 cut(s) 330
AspS9I GGNCC 2 cut(s) 67, 408
AvaII GGWCC 1 cut(s) 408
BaeGI GKGCMC 1 cut(s) 128
BauI CACGAG 1 cut(s) 105
BccI CCATC 3 cut(s) 129, 176, 399
BcoDI GTCTC 2 cut(s) 55, 451
BfaI CTAG 1 cut(s) 206
BmcAI AGTACT 1 cut(s) 46
Bme18I GGWCC 1 cut(s) 408
BmgT120I GGNCC 2 cut(s) 67, 408
BmiI GGNNCC 1 cut(s) 300
BmsI GCATC 1 cut(s) 79
BpmI CTGGAG 1 cut(s) 437
BsaBI GATNNNNATC 1 cut(s) 93
Bsc4I CCNNNNNNNGG 1 cut(s) 206
Bse1I ACTGG 3 cut(s) 133, 257, 300
Bse8I GATNNNNATC 1 cut(s) 93
BseGI GGATG 1 cut(s) 140
BseJI GATNNNNATC 1 cut(s) 93
BseLI CCNNNNNNNGG 1 cut(s) 206
BseNI ACTGG 3 cut(s) 133, 257, 300
BseSI GKGCMC 1 cut(s) 128
BshFI GGCC 2 cut(s) 68, 392
BslFI GGGAC 3 cut(s) 27, 359, 485
BslI CCNNNNNNNGG 1 cut(s) 206
BsmAI GTCTC 2 cut(s) 55, 451
BsmFI GGGAC 3 cut(s) 27, 359, 485
BsnI GGCC 2 cut(s) 68, 392
Bsp1286I GDGCHC 1 cut(s) 128
Bsp1407I TGTACA 1 cut(s) 259
Bsp143I GATC 2 cut(s) 94, 436
BspACI CCGC 1 cut(s) 132
BspANI GGCC 2 cut(s) 68, 392
BspLI GGNNCC 1 cut(s) 300
BspPI GGATC 1 cut(s) 431
BsrGI TGTACA 1 cut(s) 259
BsrI ACTGG 3 cut(s) 133, 257, 300
BssMI GATC 2 cut(s) 94, 436
BssSI CACGAG 1 cut(s) 105
Bst2BI CACGAG 1 cut(s) 105
Bst4CI ACNGT 1 cut(s) 49
Bst6I CTCTTC 1 cut(s) 65
BstAUI TGTACA 1 cut(s) 259
BstENI CCTNNNNNAGG 1 cut(s) 204
BstF5I GGATG 1 cut(s) 140
BstKTI GATC 2 cut(s) 97, 439
BstMAI GTCTC 2 cut(s) 55, 451
BstMBI GATC 2 cut(s) 94, 436
BstSLI GKGCMC 1 cut(s) 128
BsuRI GGCC 2 cut(s) 68, 392
BtsCI GGATG 1 cut(s) 140
BtsIMutI CAGTG 1 cut(s) 126
Cfr13I GGNCC 2 cut(s) 67, 408
CseI GACGC 1 cut(s) 227
Csp6I GTAC 2 cut(s) 45, 260
CviAII CATG 2 cut(s) 71, 463
CviJI RGCY 7 cut(s) 68, 104, 299, 340, 392, 415, 451
CviKI_1 RGCY 7 cut(s) 68, 104, 299, 340, 392, 415, 451
CviQI GTAC 2 cut(s) 45, 260
DpnI GATC 2 cut(s) 96, 438
DpnII GATC 2 cut(s) 94, 436
Eam1104I CTCTTC 1 cut(s) 65
EarI CTCTTC 1 cut(s) 65
EciI GGCGGA 1 cut(s) 147
Eco47I GGWCC 1 cut(s) 408
EcoNI CCTNNNNNAGG 1 cut(s) 204
FaeI CATG 2 cut(s) 74, 466
FaiI YATR 8 cut(s) 72, 113, 258, 290, 308, 343, 430, 464
FaqI GGGAC 3 cut(s) 27, 359, 485
FatI CATG 2 cut(s) 70, 462
FokI GGATG 1 cut(s) 147
FspBI CTAG 1 cut(s) 206
GsuI CTGGAG 1 cut(s) 437
HaeIII GGCC 2 cut(s) 68, 392
HgaI GACGC 1 cut(s) 227
Hin1II CATG 2 cut(s) 74, 466
HincII GTYRAC 1 cut(s) 242
HindII GTYRAC 1 cut(s) 242
HinfI GANTC 2 cut(s) 318, 459
Hpy166II GTNNAC 1 cut(s) 242
Hpy188III TCNNGA 6 cut(s) 107, 230, 315, 368, 440, 454
Hpy8I GTNNAC 1 cut(s) 242
HpyAV CCTTC 2 cut(s) 115, 343
HpyCH4III ACNGT 1 cut(s) 49
Hsp92II CATG 2 cut(s) 74, 466
Kzo9I GATC 2 cut(s) 94, 436
LmnI GCTCC 2 cut(s) 304, 456
LweI GCATC 1 cut(s) 79
MaeI CTAG 1 cut(s) 206
MalI GATC 2 cut(s) 96, 438
MboI GATC 2 cut(s) 94, 436
MboII GAAGA 3 cut(s) 52, 130, 356
MhlI GDGCHC 1 cut(s) 128
MluCI AATT 3 cut(s) 213, 280, 330
MlyI GAGTC 1 cut(s) 453
MnlI CCTC 4 cut(s) 352, 382, 387, 462
MseI TTAA 1 cut(s) 514
NdeII GATC 2 cut(s) 94, 436
NlaIII CATG 2 cut(s) 74, 466
NlaIV GGNNCC 1 cut(s) 300
PfeI GAWTC 1 cut(s) 318
PleI GAGTC 1 cut(s) 453
PpsI GAGTC 1 cut(s) 453
PspN4I GGNNCC 1 cut(s) 300
PspPI GGNCC 2 cut(s) 67, 408
RsaI GTAC 2 cut(s) 46, 261
RsaNI GTAC 2 cut(s) 45, 260
SaqAI TTAA 1 cut(s) 514
Sau3AI GATC 2 cut(s) 94, 436
Sau96I GGNCC 2 cut(s) 67, 408
ScaI AGTACT 1 cut(s) 46
SchI GAGTC 1 cut(s) 453
SduI GDGCHC 1 cut(s) 128
SetI ASST 7 cut(s) 25, 181, 202, 280, 342, 363, 453
SfaNI GCATC 1 cut(s) 79
SinI GGWCC 1 cut(s) 408
Sse9I AATT 3 cut(s) 213, 280, 330
SsiI CCGC 1 cut(s) 132
SspMI CTAG 1 cut(s) 206
TaaI ACNGT 1 cut(s) 49
TaqI TCGA 4 cut(s) 87, 387, 435, 496
TasI AATT 3 cut(s) 213, 280, 330
TatI WGTACW 2 cut(s) 44, 259
TfiI GAWTC 1 cut(s) 318
Tru1I TTAA 1 cut(s) 514
Tru9I TTAA 1 cut(s) 514
TscAI CASTG 1 cut(s) 133
TspDTI ATGAA 1 cut(s) 21
TspRI CASTG 1 cut(s) 133
VpaK11BI GGWCC 1 cut(s) 408
XagI CCTNNNNNAGG 1 cut(s) 204
XapI RAATTY 1 cut(s) 330
XspI CTAG 1 cut(s) 206
ZrmI AGTACT 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.