RLG00000014623

Dephospho-CoA kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
55525921 .. 55526483
563 bp
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UTR
Exon/CDS
Intron
RLM00000014623

Sequence Viewer

Length: 471 bp
ATGACGATAGTGGGACTGACGGGTGGGATTTTGTCTGGGAAGAGTACTGTCTCAAATCTCTTCAAGGCCTATGACATTCCTGTTCTTGACGCCGATCTTGTGGCTTGTGATGTATTGAAGAAGGGAACTGGTGGATGGAAAAATGTTGTTTCAGCATTTGGACAGGGCATTTTGCTACCTGATGGAGAAGTTGATAGGCCTAAACTAGGACAAATTGGGTTTAAGGTTATTGTTTTTGATATCCCTCTGTTGTTGGAGGCCAAGATGGACACATGGACGAAGCCCATTATTGTTGTATGGGTCGATCCTGAAACACAGCTTCAGAGATTCAAGTTGAGGAACAAAACAAGTGAGGATGATGCTCGAAACCGAATAAATGCTCAGATGTCGCTTGATTTAAAAAGGAGTAAGGCAGACATAGTGATTGATAACACTAGATCACAAGATGATTTAAAAGAGAAGTTTATTTGA

Protein Analysis

157

Amino Acids

17.3

Weight (kDa)

7.77

Isoelectric Point (pI)

27.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CoaE PF01121 3 - 74 7.2e-21 Dephospho-CoA kinase
CoaE PF01121 75 - 147 6.7e-19 Dephospho-CoA kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 299
AcuI CTGAAG 1 cut(s) 305
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 1 cut(s) 46
AfiI CCNNNNNNNGG 1 cut(s) 206
AgsI TTSAA 3 cut(s) 64, 118, 331
AluBI AGCT 1 cut(s) 319
AluI AGCT 1 cut(s) 319
Alw26I GTCTC 1 cut(s) 55
AlwI GGATC 1 cut(s) 299
AoxI GGCC 3 cut(s) 66, 197, 258
BccI CCATC 3 cut(s) 129, 176, 259
BcoDI GTCTC 1 cut(s) 55
BfaI CTAG 2 cut(s) 206, 435
BmcAI AGTACT 1 cut(s) 46
BmsI GCATC 1 cut(s) 349
BsaHI GRCGYC 1 cut(s) 90
Bsc4I CCNNNNNNNGG 1 cut(s) 206
Bse1I ACTGG 1 cut(s) 133
BseGI GGATG 2 cut(s) 140, 361
BseLI CCNNNNNNNGG 1 cut(s) 206
BseMII CTCAG 1 cut(s) 395
BseNI ACTGG 1 cut(s) 133
BshFI GGCC 3 cut(s) 68, 199, 260
BslFI GGGAC 1 cut(s) 27
BslI CCNNNNNNNGG 1 cut(s) 206
BsmAI GTCTC 1 cut(s) 55
BsmFI GGGAC 1 cut(s) 27
BsnI GGCC 3 cut(s) 68, 199, 260
Bsp143I GATC 3 cut(s) 94, 304, 437
BspANI GGCC 3 cut(s) 68, 199, 260
BspCNI CTCAG 1 cut(s) 394
BspPI GGATC 1 cut(s) 299
BsrI ACTGG 1 cut(s) 133
BssMI GATC 3 cut(s) 94, 304, 437
BssNI GRCGYC 1 cut(s) 90
Bst4CI ACNGT 1 cut(s) 49
Bst6I CTCTTC 2 cut(s) 35, 65
BstACI GRCGYC 1 cut(s) 90
BstDEI CTNAG 1 cut(s) 381
BstENI CCTNNNNNAGG 1 cut(s) 204
BstF5I GGATG 2 cut(s) 140, 361
BstKTI GATC 3 cut(s) 97, 307, 440
BstMAI GTCTC 1 cut(s) 55
BstMBI GATC 3 cut(s) 94, 304, 437
BsuRI GGCC 3 cut(s) 68, 199, 260
BtsCI GGATG 2 cut(s) 140, 361
CseI GACGC 1 cut(s) 98
Csp6I GTAC 1 cut(s) 45
CviAII CATG 1 cut(s) 273
CviJI RGCY 6 cut(s) 68, 104, 199, 260, 283, 319
CviKI_1 RGCY 6 cut(s) 68, 104, 199, 260, 283, 319
CviQI GTAC 1 cut(s) 45
DdeI CTNAG 1 cut(s) 381
DpnI GATC 3 cut(s) 96, 306, 439
DpnII GATC 3 cut(s) 94, 304, 437
DraI TTTAAA 2 cut(s) 399, 453
Eam1104I CTCTTC 2 cut(s) 35, 65
EarI CTCTTC 2 cut(s) 35, 65
Eco147I AGGCCT 2 cut(s) 68, 199
Eco32I GATATC 1 cut(s) 241
Eco57I CTGAAG 1 cut(s) 305
EcoNI CCTNNNNNAGG 1 cut(s) 204
EcoRV GATATC 1 cut(s) 241
FaeI CATG 1 cut(s) 276
FaiI YATR 4 cut(s) 72, 274, 298, 419
FaqI GGGAC 1 cut(s) 27
FatI CATG 1 cut(s) 272
FokI GGATG 2 cut(s) 147, 368
FspBI CTAG 2 cut(s) 206, 435
HaeIII GGCC 3 cut(s) 68, 199, 260
HgaI GACGC 1 cut(s) 98
Hin1I GRCGYC 1 cut(s) 90
Hin1II CATG 1 cut(s) 276
HinfI GANTC 1 cut(s) 327
Hpy188I TCNGA 2 cut(s) 324, 384
Hpy188III TCNNGA 2 cut(s) 86, 308
HpyAV CCTTC 1 cut(s) 115
HpyCH4III ACNGT 1 cut(s) 49
HpyF3I CTNAG 1 cut(s) 381
Hsp92I GRCGYC 1 cut(s) 90
Hsp92II CATG 1 cut(s) 276
Kzo9I GATC 3 cut(s) 94, 304, 437
LpnPI CCDG 6 cut(s) 21, 93, 114, 149, 192, 321
LweI GCATC 1 cut(s) 349
MaeI CTAG 2 cut(s) 206, 435
MalI GATC 3 cut(s) 96, 306, 439
MboI GATC 3 cut(s) 94, 304, 437
MboII GAAGA 3 cut(s) 52, 52, 130
MluCI AATT 1 cut(s) 213
MmeI TCCRAC 1 cut(s) 234
MnlI CCTC 4 cut(s) 250, 255, 330, 346
MseI TTAA 3 cut(s) 222, 398, 452
NdeII GATC 3 cut(s) 94, 304, 437
NlaIII CATG 1 cut(s) 276
PceI AGGCCT 2 cut(s) 68, 199
PfeI GAWTC 1 cut(s) 327
RsaI GTAC 1 cut(s) 46
RsaNI GTAC 1 cut(s) 45
SaqAI TTAA 3 cut(s) 222, 398, 452
Sau3AI GATC 3 cut(s) 94, 304, 437
ScaI AGTACT 1 cut(s) 46
SetI ASST 3 cut(s) 181, 228, 321
SfaNI GCATC 1 cut(s) 349
Sse9I AATT 1 cut(s) 213
SseBI AGGCCT 2 cut(s) 68, 199
SspMI CTAG 2 cut(s) 206, 435
StuI AGGCCT 2 cut(s) 68, 199
TaaI ACNGT 1 cut(s) 49
TaqI TCGA 2 cut(s) 303, 364
TasI AATT 1 cut(s) 213
TatI WGTACW 1 cut(s) 44
TfiI GAWTC 1 cut(s) 327
Tru1I TTAA 3 cut(s) 222, 398, 452
Tru9I TTAA 3 cut(s) 222, 398, 452
XagI CCTNNNNNAGG 1 cut(s) 204
XspI CTAG 2 cut(s) 206, 435
ZrmI AGTACT 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.