Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001149

Physical Location & Seq

Genomic Coordinates Reverse (-)

17740585 .. 17747319

Gene Structure 6735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0202700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1314 bp

ATGGTGGGTTTTATCTGTAACACAGTTGGAGAGAAAGATGGGTGTCAAGAACAAGCAGGTGGGAAAAGAGAGAATGGAGATTCTGGGCCACGCTCAGATGTTCGTACCCAACACAGGCGCTCCAAAAGTGCTTCTGACAAGAATTTTGGTATTCGAAGAGGTCGAGTTTTAAGTTCCACAAAGAAGGACAAGAATGAAACACAGGTTTCATCACCTTCAACAAGTGCGTCTACGGGACAGAGTCCTTGGCATGAAAATCCTATTTATTTTAACAAGAATATGTCATTGAACAACAGAGCGTCCTTGGAAAAAGATATCGAACAGCTGCAGTTGCGTTTGCAGGAAGAGAAATCTATGCGTAACATGCTTGAGAGGGCAATGGGCCGAGCTTCAAGTACTCTATCACCTGGACATAGACATTTCTCTGTCCAGACGAAGGAATTGATTTCTGAAATTGAATTACTTGAAGAAGAAGTTGCAAATCGCGAGCAGCAAGTTCTCTCTCTCTATAGGAGTATTTTTGAACAATGTGTTAGTAAGCCAGCTTCAGAGCAGAACTCACTTGTTGCTTCCCCTGCTCATATGAAGAATGGATCCAGGAAACATCCCAGTATCATTTCAAGTGCATTTTGTTCTGCAAAAAAATTTCCTTTCCGACATTTCAGAGCTCTAGTTGCCATAGATGACTCGGGAAAAAGAACTTCCAAGACTAGTCATACTCCACTATCTAGTGGCAAAAGCGACATTGATTTTGCAAAGACTCGTTCAAACCTTTCCAAGGTTCGTGAAAGGGTTCCAGTCCTGGAGAAAACTTCCATGCTGCGAACTCTGAAAGATCATCTCCACCAGTGCCCTAGCAAGTTAGCTGAGGAAATGGTCAGGTGTATGTCTCTAGTTTATTGTTGGCTTTGCAGTGCAGCCTCTGAGAAGATTGAGAAAAACCAATCGCCTTTGCTGTCTAGGTCATCCACTAATGTTTTACAGCCTCCACATGGTACTGAAGATGCCCAAGATTGGTCAGGCAAATCAATGGTAGAAATATCTTGGATATCAACCGATAAGAGAAAGTCTTCTCATGCTTCTTATGCCATTAATAACTATAGAATATTGGTCGAGCAACTGGAGAAGGTGGATGTCACTCAGATGGAATTGGATGCCCAAATTGCATTTTGGATCAACGTTTACAATGCGCTGCTTATGCATGCATATTTAGCATATGGAATTCCCAACAGCTCTTTAAGAAGGTTGGCCTTGTTCCATAAGTGCAGGCTGCTTACAACATTGGGGGCCTTGTCATCAGCGCAAATGCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

437

Amino Acids

49.09

Weight (kDa)

9.43

Isoelectric Point (pI)

55.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lzipper-MIP1	PF14389	97 - 176	6.4e-21	Leucine-zipper of ternary complex factor MIP1
DUF547	PF04784	380 - 422	2.2e-10	Protein of unknown function, DUF547

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001149)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27490 AT2G27490 AT2G27490 AT2G27490
fragaria_vesca	FvH4_2g25231 FvH4_3g05410 FvH4_3g05411 FvH4_7g06070 FvH4_7g06070
malus_domestica	MD11G1303900.v1.1 MD12G1063200.v1.1
prunus_persica	Prupe.8G257100_v2.0.a1
pyrus_communis	pycom03g22320 pycom11g26540
rosa_chinensis	RchiOBHm_Chr1g0333581 RchiOBHm_Chr1g0334201 RchiOBHm_Chr4g0419041 RchiOBHm_Chr5g0006471 RchiOBHm_Chr6g0258301 RchiOBHm_Chr6g0293371 RchiOBHm_Chr7g0221651
rosa_laevigata	RLG00000002140 RLG00000002141 RLG00000002148 RLG00000011952 RLG00000014623 RLG00000029551 RLG00000029602
rosa_multiflora	Rmu_sc0002955.1_g000014 Rmu_sc0005016.1_g000035 Rmu_sc0006269.1_g000029 Rmu_sc0007367.1_g000008
rosa_roxburghii	Rroxscaffold_178G00437330 Rroxscaffold_3G00238150 Rroxscaffold_7G00174220
rosa_rugosa	Rorug04G0156600 Rorug05G0580800 Rorug06G0234800 Rorug06G0234900 Rorug07G0202700
rosa_samantha	Rh1CG126800 Rh1CG129700 Rh1DG138000 Rh1DG138900 Rh1DG139400 Rh4AG218200 Rh6BG355400 Rh6CG361500 Rh6DG348600 Rh7AG343200 Rh7BG333300
rosa_wichuraiana	Rw0G017990 Rw1G010970 Rw1G011030 Rw1G011070 Rw6G008420 Rw6G030260 Rw7G029110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	47
Acc36I	ACCTGC	1 cut(s)	47
AccI	GTMKAC	1 cut(s)	230
AccII	CGCG	1 cut(s)	486
AclI	AACGTT	1 cut(s)	1179
AclWI	GGATC	3 cut(s)	588, 601, 1181
AcsI	RAATTY	3 cut(s)	142, 644, 1221
AcuI	CTGAAG	2 cut(s)	531, 1020
AfaI	GTAC	3 cut(s)	106, 397, 997
AfiI	CCNNNNNNNGG	5 cut(s)	114, 436, 778, 992, 1014
AgsI	TTSAA	8 cut(s)	219, 289, 393, 458, 467, 524, 621, 768
AhlI	ACTAGT	1 cut(s)	710
AjnI	CCWGG	3 cut(s)	406, 596, 801
AluBI	AGCT	6 cut(s)	325, 389, 545, 668, 866, 1233
AluI	AGCT	6 cut(s)	325, 389, 545, 668, 866, 1233
Alw21I	GWGCWC	1 cut(s)	670
Alw26I	GTCTC	1 cut(s)	894
AlwI	GGATC	3 cut(s)	588, 601, 1181
AlwNI	CAGNNNCTG	1 cut(s)	923
Ama87I	CYCGRG	1 cut(s)	688
AoxI	GGCC	4 cut(s)	86, 382, 1248, 1287
ApeKI	GCWGC	6 cut(s)	325, 490, 820, 917, 1192, 1270
ApoI	RAATTY	3 cut(s)	142, 644, 1221
ArsI	GACNNNNNNTTYG	4 cut(s)	128, 160, 734, 766
AseI	ATTAAT	1 cut(s)	1092
Asp700I	GAANNNNTTC	2 cut(s)	792, 1069
AspLEI	GCGC	3 cut(s)	120, 1192, 1303
AspS9I	GGNCC	3 cut(s)	86, 382, 1287
AsuHPI	GGTGA	2 cut(s)	204, 396
AsuII	TTCGAA	1 cut(s)	154
AvaI	CYCGRG	1 cut(s)	688
BaeGI	GKGCMC	1 cut(s)	854
BamHI	GGATCC	1 cut(s)	593
BanII	GRGCYC	1 cut(s)	670
BarI	GAAGNNNNNNTAC	2 cut(s)	529, 561
BbsI	GAAGAC	1 cut(s)	1062
Bbv12I	GWGCWC	1 cut(s)	670
BbvCI	CCTCAGC	1 cut(s)	867
BbvI	GCAGC	6 cut(s)	312, 502, 807, 929, 1179, 1257
BccI	CCATC	2 cut(s)	32, 1138
BciT130I	CCWGG	3 cut(s)	408, 598, 803
BcoDI	GTCTC	1 cut(s)	894
BcuI	ACTAGT	1 cut(s)	710
BfaI	CTAG	6 cut(s)	671, 711, 729, 855, 893, 960
BfmI	CTRYAG	3 cut(s)	326, 508, 1099
BfoI	RGCGCY	1 cut(s)	121
BfuAI	ACCTGC	1 cut(s)	47
BisI	GCNGC	6 cut(s)	326, 491, 821, 918, 1193, 1271
BlsI	GCNGC	6 cut(s)	327, 492, 822, 919, 1194, 1272
BmcAI	AGTACT	1 cut(s)	397
Bme1390I	CCNGG	3 cut(s)	408, 598, 803
BmeT110I	CYCGRG	1 cut(s)	688
BmgT120I	GGNCC	3 cut(s)	86, 382, 1287
BmiI	GGNNCC	3 cut(s)	595, 795, 1288
BmrFI	CCNGG	3 cut(s)	408, 598, 803
BmrI	ACTGGG	1 cut(s)	603
BmsI	GCATC	2 cut(s)	994, 1144
BmuI	ACTGGG	1 cut(s)	603
BpiI	GAAGAC	1 cut(s)	1062
BplI	GAGNNNNNCTC	2 cut(s)	542, 574
BpmI	CTGGAG	2 cut(s)	824, 1142
Bpu10I	CCTNAGC	1 cut(s)	867
Bpu14I	TTCGAA	1 cut(s)	154
BpuEI	CTTGAG	1 cut(s)	389
BsaJI	CCNNGG	3 cut(s)	245, 303, 777
BsaXI	ACNNNNNCTCC	2 cut(s)	104, 134
Bsc4I	CCNNNNNNNGG	5 cut(s)	114, 436, 778, 992, 1014
Bse1I	ACTGG	4 cut(s)	609, 797, 847, 1125
Bse3DI	GCAATG	1 cut(s)	384
BseBI	CCWGG	3 cut(s)	408, 598, 803
BseDI	CCNNGG	3 cut(s)	245, 303, 777
BseGI	GGATG	4 cut(s)	604, 965, 1138, 1159
BseLI	CCNNNNNNNGG	5 cut(s)	114, 436, 778, 992, 1014
BseMI	GCAATG	1 cut(s)	384
BseMII	CTCAG	4 cut(s)	108, 858, 915, 1154
BseNI	ACTGG	4 cut(s)	609, 797, 847, 1125
BseSI	GKGCMC	1 cut(s)	854
BseXI	GCAGC	6 cut(s)	312, 502, 807, 929, 1179, 1257
BsgI	GTGCAG	2 cut(s)	936, 1285
Bsh1236I	CGCG	1 cut(s)	486
BshFI	GGCC	4 cut(s)	88, 384, 1250, 1289
BsiHKAI	GWGCWC	1 cut(s)	670
BsiHKCI	CYCGRG	1 cut(s)	688
BslFI	GGGAC	1 cut(s)	249
BslI	CCNNNNNNNGG	5 cut(s)	114, 436, 778, 992, 1014
BsmAI	GTCTC	1 cut(s)	894
BsmFI	GGGAC	1 cut(s)	249
BsnI	GGCC	4 cut(s)	88, 384, 1250, 1289
BsoBI	CYCGRG	1 cut(s)	688
Bsp119I	TTCGAA	1 cut(s)	154
Bsp1286I	GDGCHC	2 cut(s)	670, 854
Bsp143I	GATC	3 cut(s)	593, 835, 1173
Bsp68I	TCGCGA	1 cut(s)	486
BspANI	GGCC	4 cut(s)	88, 384, 1250, 1289
BspCNI	CTCAG	4 cut(s)	107, 859, 916, 1153
BspFNI	CGCG	1 cut(s)	486
BspLI	GGNNCC	3 cut(s)	595, 795, 1288
BspMAI	CTGCAG	1 cut(s)	330
BspMI	ACCTGC	1 cut(s)	47
BspPI	GGATC	3 cut(s)	588, 601, 1181
BspT104I	TTCGAA	1 cut(s)	154
BsrDI	GCAATG	1 cut(s)	384
BsrI	ACTGG	4 cut(s)	609, 797, 847, 1125
BssECI	CCNNGG	3 cut(s)	245, 303, 777
BssMI	GATC	3 cut(s)	593, 835, 1173
BssT1I	CCWWGG	3 cut(s)	245, 303, 777
Bst2UI	CCWGG	3 cut(s)	408, 598, 803
Bst4CI	ACNGT	1 cut(s)	25
Bst6I	CTCTTC	2 cut(s)	151, 339
BstBI	TTCGAA	1 cut(s)	154
BstC8I	GCNNGC	4 cut(s)	488, 543, 1203, 1268
BstDEI	CTNAG	4 cut(s)	94, 867, 924, 1140
BstENI	CCTNNNNNAGG	1 cut(s)	776
BstF5I	GGATG	4 cut(s)	604, 965, 1138, 1159
BstFNI	CGCG	1 cut(s)	486
BstH2I	RGCGCY	1 cut(s)	121
BstHHI	GCGC	3 cut(s)	120, 1192, 1303
BstKTI	GATC	3 cut(s)	596, 838, 1176
BstMAI	GTCTC	1 cut(s)	894
BstMBI	GATC	3 cut(s)	593, 835, 1173
BstMWI	GCNNNNNNNGC	8 cut(s)	331, 364, 575, 674, 1085, 1163, 1198, 1211
BstNI	CCWGG	3 cut(s)	408, 598, 803
BstNSI	RCATGY	2 cut(s)	367, 1205
BstSCI	CCNGG	3 cut(s)	406, 596, 801
BstSFI	CTRYAG	3 cut(s)	326, 508, 1099
BstSLI	GKGCMC	1 cut(s)	854
BstUI	CGCG	1 cut(s)	486
BstV1I	GCAGC	6 cut(s)	312, 502, 807, 929, 1179, 1257
BstV2I	GAAGAC	1 cut(s)	1062
BstX2I	RGATCY	1 cut(s)	593
BstYI	RGATCY	1 cut(s)	593
BsuRI	GGCC	4 cut(s)	88, 384, 1250, 1289
BtsCI	GGATG	4 cut(s)	604, 965, 1138, 1159
BtsI	GCAGTG	1 cut(s)	919
BtsIMutI	CAGTG	2 cut(s)	854, 919
BtuMI	TCGCGA	1 cut(s)	486
BveI	ACCTGC	1 cut(s)	47
Cac8I	GCNNGC	4 cut(s)	488, 543, 1203, 1268
CaiI	CAGNNNCTG	1 cut(s)	923
CfoI	GCGC	3 cut(s)	120, 1192, 1303
Cfr13I	GGNCC	3 cut(s)	86, 382, 1287
CseI	GACGC	2 cut(s)	216, 288
Csp6I	GTAC	3 cut(s)	105, 396, 996
CviAII	CATG	6 cut(s)	251, 364, 817, 992, 1076, 1202
CviQI	GTAC	3 cut(s)	105, 396, 996
DdeI	CTNAG	4 cut(s)	94, 867, 924, 1140
DpnI	GATC	3 cut(s)	595, 837, 1175
DpnII	GATC	3 cut(s)	593, 835, 1173
Eam1104I	CTCTTC	2 cut(s)	151, 339
EarI	CTCTTC	2 cut(s)	151, 339
Ecl136II	GAGCTC	1 cut(s)	668
Eco130I	CCWWGG	3 cut(s)	245, 303, 777
Eco24I	GRGCYC	1 cut(s)	670
Eco32I	GATATC	2 cut(s)	316, 1050
Eco53kI	GAGCTC	1 cut(s)	668
Eco57I	CTGAAG	2 cut(s)	531, 1020
Eco88I	CYCGRG	1 cut(s)	688
EcoICRI	GAGCTC	1 cut(s)	668
EcoNI	CCTNNNNNAGG	1 cut(s)	776
EcoO109I	RGGNCCY	1 cut(s)	1287
EcoRI	GAATTC	1 cut(s)	1221
EcoRII	CCWGG	3 cut(s)	406, 596, 801
EcoRV	GATATC	2 cut(s)	316, 1050
EcoT14I	CCWWGG	3 cut(s)	245, 303, 777
EcoT22I	ATGCAT	2 cut(s)	1203, 1207
EcoT38I	GRGCYC	1 cut(s)	670
ErhI	CCWWGG	3 cut(s)	245, 303, 777
FaeI	CATG	6 cut(s)	254, 367, 820, 995, 1079, 1205
FaqI	GGGAC	1 cut(s)	249
FatI	CATG	6 cut(s)	250, 363, 816, 991, 1075, 1201
FauNDI	CATATG	2 cut(s)	582, 1216
FblI	GTMKAC	1 cut(s)	230
Fnu4HI	GCNGC	6 cut(s)	326, 491, 821, 918, 1193, 1271
FokI	GGATG	4 cut(s)	591, 952, 1145, 1166
FriOI	GRGCYC	1 cut(s)	670
Fsp4HI	GCNGC	6 cut(s)	326, 491, 821, 918, 1193, 1271
FspBI	CTAG	6 cut(s)	671, 711, 729, 855, 893, 960
GlaI	GCGC	3 cut(s)	119, 1191, 1302
GluI	GCNGC	6 cut(s)	326, 491, 821, 918, 1193, 1271
GsuI	CTGGAG	2 cut(s)	824, 1142
HaeII	RGCGCY	1 cut(s)	121
HaeIII	GGCC	4 cut(s)	88, 384, 1250, 1289
HgaI	GACGC	2 cut(s)	216, 288
HhaI	GCGC	3 cut(s)	120, 1192, 1303
Hin1II	CATG	6 cut(s)	254, 367, 820, 995, 1079, 1205
Hin6I	GCGC	3 cut(s)	118, 1190, 1301
HinP1I	GCGC	3 cut(s)	118, 1190, 1301
HinfI	GANTC	4 cut(s)	80, 241, 686, 760
HphI	GGTGA	2 cut(s)	204, 396
Hpy166II	GTNNAC	2 cut(s)	231, 1183
Hpy188I	TCNGA	9 cut(s)	97, 136, 451, 550, 656, 665, 831, 925, 1143
Hpy188III	TCNNGA	5 cut(s)	47, 430, 485, 690, 785
Hpy8I	GTNNAC	2 cut(s)	231, 1183
HpyAV	CCTTC	5 cut(s)	178, 225, 430, 1120, 1236
HpyCH4III	ACNGT	1 cut(s)	25
HpyCH4IV	ACGT	1 cut(s)	1179
HpyF10VI	GCNNNNNNNGC	8 cut(s)	331, 364, 575, 674, 1085, 1163, 1198, 1211
HpyF3I	CTNAG	4 cut(s)	94, 867, 924, 1140
HpySE526I	ACGT	1 cut(s)	1179
Hsp92II	CATG	6 cut(s)	254, 367, 820, 995, 1079, 1205
HspAI	GCGC	3 cut(s)	118, 1190, 1301
Kzo9I	GATC	3 cut(s)	593, 835, 1173
LmnI	GCTCC	1 cut(s)	125
Lsp1109I	GCAGC	6 cut(s)	312, 502, 807, 929, 1179, 1257
LweI	GCATC	2 cut(s)	994, 1144
MaeI	CTAG	6 cut(s)	671, 711, 729, 855, 893, 960
MaeII	ACGT	1 cut(s)	1179
MaeIII	GTNAC	3 cut(s)	17, 359, 1135
MalI	GATC	3 cut(s)	595, 837, 1175
MboI	GATC	3 cut(s)	593, 835, 1173
MboII	GAAGA	8 cut(s)	168, 356, 479, 482, 598, 940, 1013, 1062
MflI	RGATCY	1 cut(s)	593
MhlI	GDGCHC	2 cut(s)	670, 854
MluCI	AATT	8 cut(s)	142, 440, 453, 458, 644, 1148, 1161, 1221
MlyI	GAGTC	3 cut(s)	250, 680, 754
MmeI	TCCRAC	2 cut(s)	7, 679
MnlI	CCTC	5 cut(s)	152, 366, 862, 931, 996
Mph1103I	ATGCAT	2 cut(s)	1203, 1207
MroXI	GAANNNNTTC	2 cut(s)	792, 1069
MseI	TTAA	4 cut(s)	170, 270, 1092, 1238
MslI	CAYNNNNRTG	1 cut(s)	1142
MspA1I	CMGCKG	1 cut(s)	325
MspR9I	CCNGG	3 cut(s)	408, 598, 803
MvaI	CCWGG	3 cut(s)	408, 598, 803
MvnI	CGCG	1 cut(s)	486
MwoI	GCNNNNNNNGC	8 cut(s)	331, 364, 575, 674, 1085, 1163, 1198, 1211
NdeI	CATATG	2 cut(s)	582, 1216
NdeII	GATC	3 cut(s)	593, 835, 1173
NlaIII	CATG	6 cut(s)	254, 367, 820, 995, 1079, 1205
NlaIV	GGNNCC	3 cut(s)	595, 795, 1288
NmeAIII	GCCGAG	1 cut(s)	410
NmuCI	GTSAC	1 cut(s)	1135
NruI	TCGCGA	1 cut(s)	486
NsiI	ATGCAT	2 cut(s)	1203, 1207
NspI	RCATGY	2 cut(s)	367, 1205
NspV	TTCGAA	1 cut(s)	154
PaeI	GCATGC	1 cut(s)	1205
PaqCI	CACCTGC	1 cut(s)	47
PcsI	WCGNNNNNNNCGW	1 cut(s)	160
PdmI	GAANNNNTTC	2 cut(s)	792, 1069
PfeI	GAWTC	1 cut(s)	80
PflFI	GACNNNGTC	1 cut(s)	240
PfoI	TCCNGGA	2 cut(s)	596, 801
PkrI	GCNGC	6 cut(s)	327, 492, 822, 919, 1194, 1272
PleI	GAGTC	3 cut(s)	249, 680, 754
PpsI	GAGTC	3 cut(s)	249, 680, 754
PshBI	ATTAAT	1 cut(s)	1092
Psp124BI	GAGCTC	1 cut(s)	670
Psp1406I	AACGTT	1 cut(s)	1179
Psp6I	CCWGG	3 cut(s)	406, 596, 801
PspGI	CCWGG	3 cut(s)	406, 596, 801
PspN4I	GGNNCC	3 cut(s)	595, 795, 1288
PspPI	GGNCC	3 cut(s)	86, 382, 1287
PstI	CTGCAG	1 cut(s)	330
PstNI	CAGNNNCTG	1 cut(s)	923
PsuI	RGATCY	1 cut(s)	593
PsyI	GACNNNGTC	1 cut(s)	240
PvuII	CAGCTG	1 cut(s)	325
RruI	TCGCGA	1 cut(s)	486
RsaI	GTAC	3 cut(s)	106, 397, 997
RsaNI	GTAC	3 cut(s)	105, 396, 996
RseI	CAYNNNNRTG	1 cut(s)	1142
SacI	GAGCTC	1 cut(s)	670
SaqAI	TTAA	4 cut(s)	170, 270, 1092, 1238
SatI	GCNGC	6 cut(s)	326, 491, 821, 918, 1193, 1271
Sau3AI	GATC	3 cut(s)	593, 835, 1173
Sau96I	GGNCC	3 cut(s)	86, 382, 1287
ScaI	AGTACT	1 cut(s)	397
SchI	GAGTC	3 cut(s)	250, 680, 754
ScrFI	CCNGG	3 cut(s)	408, 598, 803
SduI	GDGCHC	2 cut(s)	670, 854
SfaNI	GCATC	2 cut(s)	994, 1144
SfcI	CTRYAG	3 cut(s)	326, 508, 1099
SfuI	TTCGAA	1 cut(s)	154
SmiMI	CAYNNNNRTG	1 cut(s)	1142
SmlI	CTYRAG	1 cut(s)	368
SmoI	CTYRAG	1 cut(s)	368
SpeI	ACTAGT	1 cut(s)	710
SphI	GCATGC	1 cut(s)	1205
Sse9I	AATT	8 cut(s)	142, 440, 453, 458, 644, 1148, 1161, 1221
SspI	AATATT	1 cut(s)	1107
SspMI	CTAG	6 cut(s)	671, 711, 729, 855, 893, 960
SstI	GAGCTC	1 cut(s)	670
StyD4I	CCNGG	3 cut(s)	406, 596, 801
StyI	CCWWGG	3 cut(s)	245, 303, 777
TaaI	ACNGT	1 cut(s)	25
TaiI	ACGT	1 cut(s)	1182
TaqI	TCGA	4 cut(s)	154, 163, 318, 1113
TasI	AATT	8 cut(s)	142, 440, 453, 458, 644, 1148, 1161, 1221
TatI	WGTACW	1 cut(s)	395
TfiI	GAWTC	1 cut(s)	80
Tru1I	TTAA	4 cut(s)	170, 270, 1092, 1238
Tru9I	TTAA	4 cut(s)	170, 270, 1092, 1238
TscAI	CASTG	2 cut(s)	854, 919
TseFI	GTSAC	1 cut(s)	1135
TseI	GCWGC	6 cut(s)	325, 490, 820, 917, 1192, 1270
Tsp45I	GTSAC	1 cut(s)	1135
TspDTI	ATGAA	4 cut(s)	198, 210, 267, 599
TspRI	CASTG	2 cut(s)	854, 919
Tth111I	GACNNNGTC	1 cut(s)	240
VspI	ATTAAT	1 cut(s)	1092
XagI	CCTNNNNNAGG	1 cut(s)	776
XapI	RAATTY	3 cut(s)	142, 644, 1221
XceI	RCATGY	2 cut(s)	367, 1205
XmiI	GTMKAC	1 cut(s)	230
XmnI	GAANNNNTTC	2 cut(s)	792, 1069
XspI	CTAG	6 cut(s)	671, 711, 729, 855, 893, 960
ZrmI	AGTACT	1 cut(s)	397
Zsp2I	ATGCAT	2 cut(s)	1203, 1207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.