AT1G06690

Aldo/keto reductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0005042
Physical Location & Seq
Reverse (-)
2049400 .. 2052170
2771 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G06690.1

Sequence Viewer

Length: 1134 bp
ATGGCCATGGCTACGCACTTCACCTTCCCTTTCAACTATGTTGTTTCCGAAGGCTCTCATGGAAGAAGAAGTTTCGTCCGGAAGCTGGTCAGAGCTGTAGCCTCCGGAGATTCCGTGGCTCCGGCGATTTCGGAAGAATCAAAAGTGAAATTGGGTGGCTCGGATTTGAAAGTGACGAAGCTTGGGATCGGAGTCTGGTCTTGGGGTGATAACAGCTATTGGAATGATTTCCAGTGGGATGACAGAAAATTGAAGGCGGCTAAAGGTGCTTTCGACACCAGTCTTGACAACGGTATTGATTTTTTCGATACCGCAGAAGTTTATGGTTCCAAGTTTTCCCTGGGTGCTATAAGCTCTGAAACTCTTTTAGGAAGATTCATCCGTGAGAGAAAAGAGAGATATCCCGGAGCTGAGGTTTCGGTTGCAACCAAGTTTGCTGCATTGCCATGGCGATTTGGTCGTGAAAGTGTTGTCACTGCCCTTAAAGATTCCCTTTCCCGGCTTGAGCTTTCATCTGTTGATCTCTATCAACTGCATTGGCCAGGACTATGGGGAAATGAAGGATATCTTGATGGTCTTGGGGATGCTGTTGAACAAGGACTTGTCAAGGCTGTTGGTGTTTCTAACTACAGCGAGAAGCGGCTTCGTGATGCTTATGAAAGACTCAAAAAGAGAGGAATTCCTCTGGCCTCAAATCAAGTCAACTACAGTCTGATATACAGAGCTCCAGAGCAGACTGGTGTTAAGGCTGCTTGTGATGAGCTTGGAGTTACTTTAATTGCATATTCCCCCATCGCTCAAGGTGCTCTAACTGGTAAATACACCCCAGAGAACCCACCCTCAGGTCCTCGGGGTCGCATTTATACGCGTGAGTTCTTAACAAAGCTTCAACCCCTGTTGAATAGAATCAAACAAATTGGGGAAAACTACAGCAAAACTCCCACACAGATAGCATTGAACTGGTTGGTGGCACAAGGGAACGTGATACCCATCCCAGGAGCCAAGAACGCAGAACAAGCCAAAGAGTTTGCTGGAGCGATAGGTTGGAGTCTGACAGACAATGAAGTGAGTGAGCTACGGTCCCTGGCCTCTGAGATAAAACCCGTCGTTGGTTTCCCTGTTGAGTATCTCTGA

Protein Analysis

377

Amino Acids

41.5

Weight (kDa)

8.85

Isoelectric Point (pI)

25.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 60 - 362 7.2e-58 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 868
AccIII TCCGGA 2 cut(s) 78, 104
AciI CCGC 3 cut(s) 257, 312, 640
AclWI GGATC 1 cut(s) 194
AcoI YGGCCR 2 cut(s) 3, 539
AcsI RAATTY 1 cut(s) 678
AfiI CCNNNNNNNGG 5 cut(s) 85, 498, 842, 995, 1109
AflIII ACRYGT 1 cut(s) 866
AgsI TTSAA 7 cut(s) 34, 169, 253, 593, 890, 901, 958
AjnI CCWGG 4 cut(s) 339, 541, 994, 1083
Alw21I GWGCWC 2 cut(s) 727, 808
AlwI GGATC 1 cut(s) 194
Ama87I CYCGRG 1 cut(s) 849
Aor13HI TCCGGA 2 cut(s) 78, 104
AoxI GGCC 4 cut(s) 3, 539, 687, 1086
ApeKI GCWGC 2 cut(s) 437, 749
ApoI RAATTY 1 cut(s) 678
Asp700I GAANNNNTTC 1 cut(s) 227
AspS9I GGNCC 2 cut(s) 845, 1080
AsuC2I CCSGG 2 cut(s) 405, 499
AsuHPI GGTGA 2 cut(s) 13, 218
AvaI CYCGRG 1 cut(s) 849
AvaII GGWCC 2 cut(s) 845, 1080
AxyI CCTNAGG 1 cut(s) 841
BalI TGGCCA 2 cut(s) 5, 541
BanII GRGCYC 1 cut(s) 727
Bbv12I GWGCWC 2 cut(s) 727, 808
BbvCI CCTCAGC 1 cut(s) 411
BbvI GCAGC 2 cut(s) 424, 736
BccI CCATC 3 cut(s) 566, 800, 998
BciT130I CCWGG 4 cut(s) 341, 543, 996, 1085
BcnI CCSGG 2 cut(s) 405, 499
BfmI CTRYAG 4 cut(s) 96, 628, 706, 928
BisI GCNGC 4 cut(s) 258, 438, 641, 750
BlsI GCNGC 4 cut(s) 259, 439, 642, 751
Bme1390I CCNGG 6 cut(s) 341, 405, 499, 543, 996, 1085
Bme18I GGWCC 2 cut(s) 845, 1080
BmeT110I CYCGRG 1 cut(s) 849
BmgT120I GGNCC 2 cut(s) 845, 1080
BmiI GGNNCC 4 cut(s) 120, 328, 1000, 1082
BmrFI CCNGG 6 cut(s) 341, 405, 499, 543, 996, 1085
BmsI GCATC 2 cut(s) 574, 640
BoxI GACNNNNGTC 1 cut(s) 279
BpmI CTGGAG 2 cut(s) 711, 1053
Bpu10I CCTNAGC 1 cut(s) 411
BpuEI CTTGAG 2 cut(s) 524, 783
BpuMI CCSGG 2 cut(s) 405, 499
BsaBI GATNNNNATC 2 cut(s) 525, 989
BsaJI CCNNGG 8 cut(s) 6, 114, 339, 340, 446, 848, 994, 1083
BsaWI WCCGGW 2 cut(s) 78, 104
BsaXI ACNNNNNCTCC 4 cut(s) 99, 129, 399, 429
Bsc4I CCNNNNNNNGG 5 cut(s) 85, 498, 842, 995, 1109
Bse1I ACTGG 5 cut(s) 232, 279, 742, 817, 965
Bse21I CCTNAGG 1 cut(s) 841
Bse3DI GCAATG 1 cut(s) 440
Bse8I GATNNNNATC 2 cut(s) 525, 989
BseAI TCCGGA 2 cut(s) 78, 104
BseBI CCWGG 4 cut(s) 341, 543, 996, 1085
BseDI CCNNGG 8 cut(s) 6, 114, 339, 340, 446, 848, 994, 1083
BseGI GGATG 4 cut(s) 244, 378, 589, 990
BseJI GATNNNNATC 2 cut(s) 525, 989
BseLI CCNNNNNNNGG 5 cut(s) 85, 498, 842, 995, 1109
BseMI GCAATG 1 cut(s) 440
BseMII CTCAG 3 cut(s) 402, 855, 1083
BseNI ACTGG 5 cut(s) 232, 279, 742, 817, 965
BseXI GCAGC 2 cut(s) 424, 736
Bsh1236I CGCG 1 cut(s) 868
BshFI GGCC 4 cut(s) 5, 541, 689, 1088
BsiHKAI GWGCWC 2 cut(s) 727, 808
BsiHKCI CYCGRG 1 cut(s) 849
BsiSI CCGG 5 cut(s) 79, 105, 122, 405, 499
BslFI GGGAC 1 cut(s) 1066
BslI CCNNNNNNNGG 5 cut(s) 85, 498, 842, 995, 1109
BsmFI GGGAC 1 cut(s) 1066
BsnI GGCC 4 cut(s) 5, 541, 689, 1088
BsoBI CYCGRG 1 cut(s) 849
Bsp1286I GDGCHC 2 cut(s) 727, 808
Bsp13I TCCGGA 2 cut(s) 78, 104
Bsp143I GATC 2 cut(s) 186, 520
Bsp19I CCATGG 2 cut(s) 6, 446
BspACI CCGC 3 cut(s) 257, 312, 640
BspANI GGCC 4 cut(s) 5, 541, 689, 1088
BspCNI CTCAG 3 cut(s) 403, 854, 1084
BspEI TCCGGA 2 cut(s) 78, 104
BspFNI CGCG 1 cut(s) 868
BspLI GGNNCC 4 cut(s) 120, 328, 1000, 1082
BspPI GGATC 1 cut(s) 194
BsrDI GCAATG 1 cut(s) 440
BsrI ACTGG 5 cut(s) 232, 279, 742, 817, 965
BssECI CCNNGG 8 cut(s) 6, 114, 339, 340, 446, 848, 994, 1083
BssMI GATC 2 cut(s) 186, 520
BssT1I CCWWGG 2 cut(s) 6, 446
Bst2UI CCWGG 4 cut(s) 341, 543, 996, 1085
Bst4CI ACNGT 3 cut(s) 293, 710, 1080
BstDEI CTNAG 3 cut(s) 411, 841, 1092
BstDSI CCRYGG 3 cut(s) 6, 114, 446
BstF5I GGATG 4 cut(s) 244, 378, 589, 990
BstFNI CGCG 1 cut(s) 868
BstKTI GATC 2 cut(s) 189, 523
BstMBI GATC 2 cut(s) 186, 520
BstMWI GCNNNNNNNGC 4 cut(s) 266, 803, 1007, 1016
BstNI CCWGG 4 cut(s) 341, 543, 996, 1085
BstPAI GACNNNNGTC 1 cut(s) 279
BstSCI CCNGG 6 cut(s) 339, 403, 497, 541, 994, 1083
BstSFI CTRYAG 4 cut(s) 96, 628, 706, 928
BstUI CGCG 1 cut(s) 868
BstV1I GCAGC 2 cut(s) 424, 736
BstXI CCANNNNNNTGG 1 cut(s) 549
Bsu36I CCTNAGG 1 cut(s) 841
BsuRI GGCC 4 cut(s) 5, 541, 689, 1088
BtgI CCRYGG 3 cut(s) 6, 114, 446
BtgZI GCGATG 1 cut(s) 778
BtsCI GGATG 4 cut(s) 244, 378, 589, 990
BtsI GCAGTG 1 cut(s) 474
BtsIMutI CAGTG 2 cut(s) 239, 474
Cfr13I GGNCC 2 cut(s) 845, 1080
CviAII CATG 3 cut(s) 7, 59, 447
DdeI CTNAG 3 cut(s) 411, 841, 1092
DpnI GATC 2 cut(s) 188, 522
DpnII GATC 2 cut(s) 186, 520
EaeI YGGCCR 2 cut(s) 3, 539
Ecl136II GAGCTC 1 cut(s) 725
Eco130I CCWWGG 2 cut(s) 6, 446
Eco24I GRGCYC 1 cut(s) 727
Eco32I GATATC 2 cut(s) 401, 566
Eco47I GGWCC 2 cut(s) 845, 1080
Eco53kI GAGCTC 1 cut(s) 725
Eco81I CCTNAGG 1 cut(s) 841
Eco88I CYCGRG 1 cut(s) 849
EcoICRI GAGCTC 1 cut(s) 725
EcoO109I RGGNCCY 1 cut(s) 845
EcoRI GAATTC 1 cut(s) 678
EcoRII CCWGG 4 cut(s) 339, 541, 994, 1083
EcoRV GATATC 2 cut(s) 401, 566
EcoT14I CCWWGG 2 cut(s) 6, 446
EcoT38I GRGCYC 1 cut(s) 727
ErhI CCWWGG 2 cut(s) 6, 446
FaeI CATG 3 cut(s) 10, 62, 450
FalI AAGNNNNNCTT 4 cut(s) 477, 509, 552, 584
FaqI GGGAC 1 cut(s) 1066
FatI CATG 3 cut(s) 6, 58, 446
Fnu4HI GCNGC 4 cut(s) 258, 438, 641, 750
FokI GGATG 4 cut(s) 251, 365, 596, 977
FriOI GRGCYC 1 cut(s) 727
Fsp4HI GCNGC 4 cut(s) 258, 438, 641, 750
GluI GCNGC 4 cut(s) 258, 438, 641, 750
GsuI CTGGAG 2 cut(s) 711, 1053
HaeIII GGCC 4 cut(s) 5, 541, 689, 1088
HapII CCGG 5 cut(s) 79, 105, 122, 405, 499
Hin1II CATG 3 cut(s) 10, 62, 450
HincII GTYRAC 1 cut(s) 703
HindII GTYRAC 1 cut(s) 703
HindIII AAGCTT 2 cut(s) 179, 884
HinfI GANTC 8 cut(s) 110, 137, 192, 375, 488, 663, 906, 1048
HpaII CCGG 5 cut(s) 79, 105, 122, 405, 499
HphI GGTGA 2 cut(s) 13, 218
Hpy166II GTNNAC 1 cut(s) 703
Hpy188III TCNNGA 7 cut(s) 79, 105, 284, 461, 569, 647, 728
Hpy8I GTNNAC 1 cut(s) 703
Hpy99I CGWCG 1 cut(s) 1109
HpyAV CCTTC 4 cut(s) 34, 44, 247, 554
HpyCH4III ACNGT 3 cut(s) 293, 710, 1080
HpyCH4IV ACGT 1 cut(s) 981
HpyCH4V TGCA 4 cut(s) 425, 440, 535, 782
HpyF10VI GCNNNNNNNGC 4 cut(s) 266, 803, 1007, 1016
HpyF3I CTNAG 3 cut(s) 411, 841, 1092
HpySE526I ACGT 1 cut(s) 981
Hsp92II CATG 3 cut(s) 10, 62, 450
Kpn2I TCCGGA 2 cut(s) 78, 104
Kzo9I GATC 2 cut(s) 186, 520
LmnI GCTCC 5 cut(s) 124, 407, 730, 998, 1034
Lsp1109I GCAGC 2 cut(s) 424, 736
LweI GCATC 2 cut(s) 574, 640
MaeII ACGT 1 cut(s) 981
MaeIII GTNAC 3 cut(s) 172, 472, 769
MalI GATC 2 cut(s) 188, 522
MboI GATC 2 cut(s) 186, 520
MboII GAAGA 4 cut(s) 75, 78, 146, 384
MhlI GDGCHC 2 cut(s) 727, 808
MlsI TGGCCA 2 cut(s) 5, 541
MluCI AATT 5 cut(s) 149, 248, 678, 777, 915
MluI ACGCGT 1 cut(s) 866
MluNI TGGCCA 2 cut(s) 5, 541
MlyI GAGTC 3 cut(s) 201, 657, 1057
MmeI TCCRAC 1 cut(s) 1025
MnlI CCTC 8 cut(s) 112, 406, 668, 693, 700, 850, 858, 1099
Mox20I TGGCCA 2 cut(s) 5, 541
MroI TCCGGA 2 cut(s) 78, 104
MroXI GAANNNNTTC 1 cut(s) 227
MscI TGGCCA 2 cut(s) 5, 541
MseI TTAA 4 cut(s) 483, 744, 776, 878
MslI CAYNNNNRTG 1 cut(s) 445
Msp20I TGGCCA 2 cut(s) 5, 541
MspI CCGG 5 cut(s) 79, 105, 122, 405, 499
MspR9I CCNGG 6 cut(s) 341, 405, 499, 543, 996, 1085
MvaI CCWGG 4 cut(s) 341, 543, 996, 1085
MvnI CGCG 1 cut(s) 868
MwoI GCNNNNNNNGC 4 cut(s) 266, 803, 1007, 1016
NciI CCSGG 2 cut(s) 405, 499
NcoI CCATGG 2 cut(s) 6, 446
NdeII GATC 2 cut(s) 186, 520
NlaIII CATG 3 cut(s) 10, 62, 450
NlaIV GGNNCC 4 cut(s) 120, 328, 1000, 1082
NmuCI GTSAC 2 cut(s) 172, 472
PasI CCCWGGG 1 cut(s) 340
PdmI GAANNNNTTC 1 cut(s) 227
PfeI GAWTC 5 cut(s) 110, 137, 375, 488, 906
PfoI TCCNGGA 1 cut(s) 403
PkrI GCNGC 4 cut(s) 259, 439, 642, 751
PleI GAGTC 3 cut(s) 200, 657, 1056
PpsI GAGTC 3 cut(s) 200, 657, 1056
PpuMI RGGWCCY 1 cut(s) 845
PshAI GACNNNNGTC 1 cut(s) 279
Psp124BI GAGCTC 1 cut(s) 727
Psp5II RGGWCCY 1 cut(s) 845
Psp6I CCWGG 4 cut(s) 339, 541, 994, 1083
PspGI CCWGG 4 cut(s) 339, 541, 994, 1083
PspN4I GGNNCC 4 cut(s) 120, 328, 1000, 1082
PspPI GGNCC 2 cut(s) 845, 1080
PspPPI RGGWCCY 1 cut(s) 845
RseI CAYNNNNRTG 1 cut(s) 445
SacI GAGCTC 1 cut(s) 727
SaqAI TTAA 4 cut(s) 483, 744, 776, 878
SatI GCNGC 4 cut(s) 258, 438, 641, 750
Sau3AI GATC 2 cut(s) 186, 520
Sau96I GGNCC 2 cut(s) 845, 1080
SchI GAGTC 3 cut(s) 201, 657, 1057
ScrFI CCNGG 6 cut(s) 341, 405, 499, 543, 996, 1085
SduI GDGCHC 2 cut(s) 727, 808
SfaNI GCATC 2 cut(s) 574, 640
SfcI CTRYAG 4 cut(s) 96, 628, 706, 928
SinI GGWCC 2 cut(s) 845, 1080
SmiMI CAYNNNNRTG 1 cut(s) 445
SmlI CTYRAG 2 cut(s) 503, 798
SmoI CTYRAG 2 cut(s) 503, 798
Sse9I AATT 5 cut(s) 149, 248, 678, 777, 915
SsiI CCGC 3 cut(s) 257, 312, 640
SstI GAGCTC 1 cut(s) 727
StyD4I CCNGG 6 cut(s) 339, 403, 497, 541, 994, 1083
StyI CCWWGG 2 cut(s) 6, 446
TaaI ACNGT 3 cut(s) 293, 710, 1080
TaiI ACGT 1 cut(s) 984
TaqI TCGA 2 cut(s) 273, 306
TasI AATT 5 cut(s) 149, 248, 678, 777, 915
TauI GCSGC 2 cut(s) 260, 643
TfiI GAWTC 5 cut(s) 110, 137, 375, 488, 906
Tru1I TTAA 4 cut(s) 483, 744, 776, 878
Tru9I TTAA 4 cut(s) 483, 744, 776, 878
TscAI CASTG 2 cut(s) 239, 481
TseFI GTSAC 2 cut(s) 172, 472
TseI GCWGC 2 cut(s) 437, 749
Tsp45I GTSAC 2 cut(s) 172, 472
TspDTI ATGAA 5 cut(s) 367, 501, 573, 672, 1077
TspGWI ACGGA 2 cut(s) 103, 371
TspRI CASTG 2 cut(s) 239, 481
VpaK11BI GGWCC 2 cut(s) 845, 1080
XapI RAATTY 1 cut(s) 678
XcmI CCANNNNNNNNNTGG 1 cut(s) 337
XmnI GAANNNNTTC 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.