AT1G14550

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0006076
Physical Location & Seq
Forward (+)
4978922 .. 4980466
1545 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G14550.1

Sequence Viewer

Length: 966 bp
ATGGAGAGATTTTCACTAAGGTTTGTGCTAATGATGGTGAGCATCATCCTCACGTCATCGATTTGTCAAGCACAACTTTCTCCAACATTCTACGATCAATCGTGTCGGAATGCTCTTTCGAAGATCAGATCCTCCGTTAGAACGGCCATCGCTCGTGAGAGAAGAATGGCCGCGTCTCTAATCCGCATGCACTTCCATGACTGTTTTGTTCATGGGTGTGACGCGTCGATATTGCTCGAGGGAACATCAACGATAGAGAGTGAACGAGATGCATTGCCAAACTTCAAATCAGTAAGAGGTTTTGAAGTCATAGATAAAGCCAAATCCGAAGTCGAGAAAGTTTGTCCCGGCATTGTTTCTTGCGCTGATATCATAGCGGTTGCGGCAAGAGACGCTTCTGAATACGTGGGAGGTCCAAAATGGGCAGTGAAAGTCGGAAGACGAGATTCGACAGCTGCGTTCAAGGCTCTAGCAAATAGTGGTGAACTCCCGGGATTTAAAGATACCCTTGATCAACTCTCAGGTCTTTTCAGCAAGAAAGGTCTTAACACAAGAGACCTTGTTGCTCTTTCAGGAGCACACACCATAGGACAATCTCAATGCTTCTTGTTCCGGGACAGGCTTTACGAGAACTCAAGCGACATCGACGCAGGATTTGCCAGCACACGCAAACGTCGATGCCCAACCGTGGGAGGTGATGGTAATCTGGCAGCATTGGATCTAGTAACACCTAATTCTTTCGACAACAATTACTACAAAAACTTAATGCAAAAGAAAGGACTATTAGTAACCGATCAAGTTTTGTTCGGGTCCGGTGCATCAACTGACGGCATTGTGTCGGAATATAGCAAGAACCGGTCAAAATTCGCGGCAGATTTCGCAACAGCCATGATCAAGATGGGTAATATAGAACCTCTCACTGGCTCTAATGGAGAAATCAGAAAGATATGCAGCTTTGTTAATTAA

Protein Analysis

321

Amino Acids

35.01

Weight (kDa)

8.92

Isoelectric Point (pI)

34.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 42 - 285 1.6e-81 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 173, 224, 869
AciI CCGC 5 cut(s) 171, 184, 377, 383, 869
AclWI GGATC 2 cut(s) 123, 726
AcoI YGGCCR 2 cut(s) 144, 168
AcsI RAATTY 1 cut(s) 863
AfiI CCNNNNNNNGG 3 cut(s) 688, 689, 920
AflIII ACRYGT 1 cut(s) 222
AgeI ACCGGT 1 cut(s) 855
AgsI TTSAA 3 cut(s) 286, 305, 463
AjiI CACGTC 1 cut(s) 54
AluBI AGCT 2 cut(s) 455, 954
AluI AGCT 2 cut(s) 455, 954
Alw21I GWGCWC 1 cut(s) 580
Alw26I GTCTC 3 cut(s) 180, 384, 549
AlwI GGATC 2 cut(s) 123, 726
Ama87I CYCGRG 2 cut(s) 236, 490
AoxI GGCC 2 cut(s) 144, 168
ApeKI GCWGC 3 cut(s) 455, 710, 951
ApoI RAATTY 1 cut(s) 863
ArsI GACNNNNNNTTYG 4 cut(s) 315, 347, 638, 670
AsiGI ACCGGT 1 cut(s) 855
AspLEI GCGC 1 cut(s) 365
AspS9I GGNCC 2 cut(s) 413, 810
AsuC2I CCSGG 4 cut(s) 348, 491, 492, 614
AsuHPI GGTGA 3 cut(s) 49, 494, 707
AsuII TTCGAA 1 cut(s) 119
AvaI CYCGRG 2 cut(s) 236, 490
AvaII GGWCC 2 cut(s) 413, 810
BauI CACGAG 1 cut(s) 153
BbsI GAAGAC 1 cut(s) 445
Bbv12I GWGCWC 1 cut(s) 580
BbvI GCAGC 2 cut(s) 442, 722
BccI CCATC 4 cut(s) 28, 155, 692, 892
BceAI ACGGC 2 cut(s) 159, 844
BclI TGATCA 2 cut(s) 511, 891
BcnI CCSGG 4 cut(s) 348, 491, 492, 614
BcoDI GTCTC 3 cut(s) 180, 384, 549
BfaI CTAG 2 cut(s) 470, 722
BisI GCNGC 6 cut(s) 171, 384, 456, 711, 870, 952
BlsI GCNGC 6 cut(s) 172, 385, 457, 712, 871, 953
Bme1390I CCNGG 4 cut(s) 348, 491, 492, 614
Bme18I GGWCC 2 cut(s) 413, 810
BmeT110I CYCGRG 2 cut(s) 236, 490
BmgBI CACGTC 1 cut(s) 54
BmgT120I GGNCC 2 cut(s) 413, 810
BmiI GGNNCC 1 cut(s) 811
BmrFI CCNGG 4 cut(s) 348, 491, 492, 614
BmsI GCATC 4 cut(s) 51, 259, 668, 827
BpiI GAAGAC 1 cut(s) 445
Bpu14I TTCGAA 1 cut(s) 119
BpuEI CTTGAG 1 cut(s) 619
BpuMI CCSGG 4 cut(s) 348, 491, 492, 614
Bsa29I ATCGAT 1 cut(s) 59
BsaAI YACGTR 1 cut(s) 406
BsaBI GATNNNNATC 1 cut(s) 702
BsaI GGTCTC 1 cut(s) 549
BsaJI CCNNGG 2 cut(s) 490, 687
BsaWI WCCGGW 2 cut(s) 812, 855
Bsc4I CCNNNNNNNGG 3 cut(s) 688, 689, 920
Bse118I RCCGGY 1 cut(s) 855
Bse1I ACTGG 1 cut(s) 925
Bse3DI GCAATG 1 cut(s) 272
Bse8I GATNNNNATC 1 cut(s) 702
BseCI ATCGAT 1 cut(s) 59
BseDI CCNNGG 2 cut(s) 490, 687
BseGI GGATG 1 cut(s) 45
BseJI GATNNNNATC 1 cut(s) 702
BseLI CCNNNNNNNGG 3 cut(s) 688, 689, 920
BseMI GCAATG 1 cut(s) 272
BseMII CTCAG 1 cut(s) 534
BseNI ACTGG 1 cut(s) 925
BseXI GCAGC 2 cut(s) 442, 722
Bsh1236I CGCG 3 cut(s) 173, 224, 869
BshFI GGCC 2 cut(s) 146, 170
BshTI ACCGGT 1 cut(s) 855
BshVI ATCGAT 1 cut(s) 59
BsiHKAI GWGCWC 1 cut(s) 580
BsiHKCI CYCGRG 2 cut(s) 236, 490
BsiSI CCGG 5 cut(s) 348, 491, 613, 813, 856
BslFI GGGAC 2 cut(s) 330, 629
BslI CCNNNNNNNGG 3 cut(s) 688, 689, 920
BsmAI GTCTC 3 cut(s) 180, 384, 549
BsmBI CGTCTC 2 cut(s) 180, 384
BsmFI GGGAC 2 cut(s) 330, 629
BsmI GAATGC 1 cut(s) 115
BsnI GGCC 2 cut(s) 146, 170
Bso31I GGTCTC 1 cut(s) 549
BsoBI CYCGRG 2 cut(s) 236, 490
Bsp119I TTCGAA 1 cut(s) 119
Bsp1286I GDGCHC 1 cut(s) 580
Bsp143I GATC 7 cut(s) 94, 123, 128, 511, 718, 793, 891
BspACI CCGC 5 cut(s) 171, 184, 377, 383, 869
BspANI GGCC 2 cut(s) 146, 170
BspCNI CTCAG 1 cut(s) 533
BspDI ATCGAT 1 cut(s) 59
BspFNI CGCG 3 cut(s) 173, 224, 869
BspLI GGNNCC 1 cut(s) 811
BspPI GGATC 2 cut(s) 123, 726
BspT104I TTCGAA 1 cut(s) 119
BspTNI GGTCTC 1 cut(s) 549
BsrDI GCAATG 1 cut(s) 272
BsrFI RCCGGY 1 cut(s) 855
BsrI ACTGG 1 cut(s) 925
BssAI RCCGGY 1 cut(s) 855
BssECI CCNNGG 2 cut(s) 490, 687
BssMI GATC 7 cut(s) 94, 123, 128, 511, 718, 793, 891
BssSI CACGAG 1 cut(s) 153
Bst2BI CACGAG 1 cut(s) 153
Bst4CI ACNGT 2 cut(s) 203, 688
BstAPI GCANNNNNTGC 1 cut(s) 656
BstBAI YACGTR 1 cut(s) 406
BstBI TTCGAA 1 cut(s) 119
BstC8I GCNNGC 2 cut(s) 188, 661
BstDEI CTNAG 2 cut(s) 17, 520
BstDSI CCRYGG 1 cut(s) 687
BstF5I GGATG 1 cut(s) 45
BstFNI CGCG 3 cut(s) 173, 224, 869
BstHHI GCGC 1 cut(s) 365
BstKTI GATC 7 cut(s) 97, 126, 131, 514, 721, 796, 894
BstMAI GTCTC 3 cut(s) 180, 384, 549
BstMBI GATC 7 cut(s) 94, 123, 128, 511, 718, 793, 891
BstMWI GCNNNNNNNGC 5 cut(s) 383, 392, 464, 656, 878
BstNSI RCATGY 1 cut(s) 190
BstSCI CCNGG 4 cut(s) 346, 489, 490, 612
BstUI CGCG 3 cut(s) 173, 224, 869
BstV1I GCAGC 2 cut(s) 442, 722
BstV2I GAAGAC 1 cut(s) 445
BstX2I RGATCY 2 cut(s) 128, 718
BstYI RGATCY 2 cut(s) 128, 718
Bsu15I ATCGAT 1 cut(s) 59
BsuRI GGCC 2 cut(s) 146, 170
BsuTUI ATCGAT 1 cut(s) 59
BtgI CCRYGG 1 cut(s) 687
BtgZI GCGATG 1 cut(s) 133
BtrI CACGTC 1 cut(s) 54
BtsCI GGATG 1 cut(s) 45
BtsI GCAGTG 1 cut(s) 432
BtsIMutI CAGTG 2 cut(s) 432, 918
Cac8I GCNNGC 2 cut(s) 188, 661
CfoI GCGC 1 cut(s) 365
Cfr10I RCCGGY 1 cut(s) 855
Cfr13I GGNCC 2 cut(s) 413, 810
Cfr9I CCCGGG 1 cut(s) 490
ClaI ATCGAT 1 cut(s) 59
CseI GACGC 5 cut(s) 162, 213, 230, 401, 656
CspAI ACCGGT 1 cut(s) 855
CviAII CATG 4 cut(s) 187, 197, 212, 889
CviJI RGCY 9 cut(s) 146, 170, 320, 455, 467, 622, 887, 924, 954
CviKI_1 RGCY 9 cut(s) 146, 170, 320, 455, 467, 622, 887, 924, 954
DdeI CTNAG 2 cut(s) 17, 520
DpnI GATC 7 cut(s) 96, 125, 130, 513, 720, 795, 893
DpnII GATC 7 cut(s) 94, 123, 128, 511, 718, 793, 891
DraI TTTAAA 1 cut(s) 499
EaeI YGGCCR 2 cut(s) 144, 168
Eco31I GGTCTC 1 cut(s) 549
Eco32I GATATC 1 cut(s) 370
Eco47I GGWCC 2 cut(s) 413, 810
Eco88I CYCGRG 2 cut(s) 236, 490
EcoRV GATATC 1 cut(s) 370
EcoT22I ATGCAT 1 cut(s) 274
Esp3I CGTCTC 2 cut(s) 180, 384
FaeI CATG 4 cut(s) 190, 200, 215, 892
FalI AAGNNNNNCTT 6 cut(s) 60, 92, 379, 411, 492, 524
FaqI GGGAC 2 cut(s) 330, 629
FatI CATG 4 cut(s) 186, 196, 211, 888
FbaI TGATCA 2 cut(s) 511, 891
Fnu4HI GCNGC 6 cut(s) 171, 384, 456, 711, 870, 952
FokI GGATG 1 cut(s) 32
Fsp4HI GCNGC 6 cut(s) 171, 384, 456, 711, 870, 952
FspBI CTAG 2 cut(s) 470, 722
GlaI GCGC 1 cut(s) 364
GluI GCNGC 6 cut(s) 171, 384, 456, 711, 870, 952
HaeIII GGCC 2 cut(s) 146, 170
HapII CCGG 5 cut(s) 348, 491, 613, 813, 856
HgaI GACGC 5 cut(s) 162, 213, 230, 401, 656
HhaI GCGC 1 cut(s) 365
Hin1II CATG 4 cut(s) 190, 200, 215, 892
Hin6I GCGC 1 cut(s) 363
HinP1I GCGC 1 cut(s) 363
HinfI GANTC 1 cut(s) 446
HpaII CCGG 5 cut(s) 348, 491, 613, 813, 856
HphI GGTGA 3 cut(s) 49, 494, 707
Hpy166II GTNNAC 2 cut(s) 263, 485
Hpy188I TCNGA 7 cut(s) 108, 128, 328, 400, 437, 841, 941
Hpy188III TCNNGA 4 cut(s) 155, 334, 573, 895
Hpy8I GTNNAC 2 cut(s) 263, 485
Hpy99I CGWCG 3 cut(s) 229, 650, 678
HpyCH4III ACNGT 2 cut(s) 203, 688
HpyCH4IV ACGT 3 cut(s) 53, 405, 673
HpyCH4V TGCA 5 cut(s) 190, 272, 769, 818, 951
HpyF10VI GCNNNNNNNGC 5 cut(s) 383, 392, 464, 656, 878
HpyF3I CTNAG 2 cut(s) 17, 520
HpySE526I ACGT 3 cut(s) 53, 405, 673
Hsp92II CATG 4 cut(s) 190, 200, 215, 892
HspAI GCGC 1 cut(s) 363
Ksp22I TGATCA 2 cut(s) 511, 891
Kzo9I GATC 7 cut(s) 94, 123, 128, 511, 718, 793, 891
LmnI GCTCC 1 cut(s) 575
Lsp1109I GCAGC 2 cut(s) 442, 722
LweI GCATC 4 cut(s) 51, 259, 668, 827
MaeI CTAG 2 cut(s) 470, 722
MaeII ACGT 3 cut(s) 53, 405, 673
MaeIII GTNAC 3 cut(s) 218, 724, 787
MalI GATC 7 cut(s) 96, 125, 130, 513, 720, 795, 893
MboI GATC 7 cut(s) 94, 123, 128, 511, 718, 793, 891
MboII GAAGA 3 cut(s) 133, 174, 450
MflI RGATCY 2 cut(s) 128, 718
MhlI GDGCHC 1 cut(s) 580
MluCI AATT 4 cut(s) 733, 748, 863, 961
MluI ACGCGT 1 cut(s) 222
MmeI TCCRAC 4 cut(s) 86, 107, 415, 819
MnlI CCTC 7 cut(s) 59, 142, 232, 290, 404, 686, 924
Mph1103I ATGCAT 1 cut(s) 274
MseI TTAA 5 cut(s) 498, 546, 764, 960, 964
MslI CAYNNNNRTG 2 cut(s) 195, 216
MspA1I CMGCKG 1 cut(s) 455
MspI CCGG 5 cut(s) 348, 491, 613, 813, 856
MspR9I CCNGG 4 cut(s) 348, 491, 492, 614
Mva1269I GAATGC 1 cut(s) 115
MvnI CGCG 3 cut(s) 173, 224, 869
MwoI GCNNNNNNNGC 5 cut(s) 383, 392, 464, 656, 878
NciI CCSGG 4 cut(s) 348, 491, 492, 614
NdeII GATC 7 cut(s) 94, 123, 128, 511, 718, 793, 891
NlaIII CATG 4 cut(s) 190, 200, 215, 892
NlaIV GGNNCC 1 cut(s) 811
NmuCI GTSAC 1 cut(s) 218
NsiI ATGCAT 1 cut(s) 274
NspI RCATGY 1 cut(s) 190
NspV TTCGAA 1 cut(s) 119
PacI TTAATTAA 1 cut(s) 964
PaeI GCATGC 1 cut(s) 190
PaeR7I CTCGAG 1 cut(s) 236
PcsI WCGNNNNNNNCGW 2 cut(s) 455, 673
PctI GAATGC 1 cut(s) 115
PfeI GAWTC 1 cut(s) 446
PfoI TCCNGGA 1 cut(s) 612
PinAI ACCGGT 1 cut(s) 855
PkrI GCNGC 6 cut(s) 172, 385, 457, 712, 871, 953
Ppu21I YACGTR 1 cut(s) 406
PspN4I GGNNCC 1 cut(s) 811
PspPI GGNCC 2 cut(s) 413, 810
PspXI VCTCGAGB 1 cut(s) 236
PsuI RGATCY 2 cut(s) 128, 718
PvuII CAGCTG 1 cut(s) 455
RseI CAYNNNNRTG 2 cut(s) 195, 216
SaqAI TTAA 5 cut(s) 498, 546, 764, 960, 964
SatI GCNGC 6 cut(s) 171, 384, 456, 711, 870, 952
Sau3AI GATC 7 cut(s) 94, 123, 128, 511, 718, 793, 891
Sau96I GGNCC 2 cut(s) 413, 810
ScrFI CCNGG 4 cut(s) 348, 491, 492, 614
SduI GDGCHC 1 cut(s) 580
SfaNI GCATC 4 cut(s) 51, 259, 668, 827
Sfr274I CTCGAG 1 cut(s) 236
SfuI TTCGAA 1 cut(s) 119
SinI GGWCC 2 cut(s) 413, 810
SlaI CTCGAG 1 cut(s) 236
SmaI CCCGGG 1 cut(s) 492
SmiMI CAYNNNNRTG 2 cut(s) 195, 216
SmlI CTYRAG 2 cut(s) 236, 634
SmoI CTYRAG 2 cut(s) 236, 634
SphI GCATGC 1 cut(s) 190
Sse9I AATT 4 cut(s) 733, 748, 863, 961
SsiI CCGC 5 cut(s) 171, 184, 377, 383, 869
SspMI CTAG 2 cut(s) 470, 722
StyD4I CCNGG 4 cut(s) 346, 489, 490, 612
TaaI ACNGT 2 cut(s) 203, 688
TaiI ACGT 3 cut(s) 56, 408, 676
TaqI TCGA 9 cut(s) 59, 119, 227, 237, 333, 449, 645, 676, 741
TasI AATT 4 cut(s) 733, 748, 863, 961
TauI GCSGC 3 cut(s) 173, 386, 872
TfiI GAWTC 1 cut(s) 446
Tru1I TTAA 5 cut(s) 498, 546, 764, 960, 964
Tru9I TTAA 5 cut(s) 498, 546, 764, 960, 964
TscAI CASTG 2 cut(s) 432, 925
TseFI GTSAC 1 cut(s) 218
TseI GCWGC 3 cut(s) 455, 710, 951
Tsp45I GTSAC 1 cut(s) 218
TspDTI ATGAA 1 cut(s) 200
TspGWI ACGGA 1 cut(s) 124
TspMI CCCGGG 1 cut(s) 490
TspRI CASTG 2 cut(s) 432, 925
VpaK11BI GGWCC 2 cut(s) 413, 810
XapI RAATTY 1 cut(s) 863
XceI RCATGY 1 cut(s) 190
XcmI CCANNNNNNNNNTGG 1 cut(s) 895
XhoI CTCGAG 1 cut(s) 236
XmaI CCCGGG 1 cut(s) 490
XspI CTAG 2 cut(s) 470, 722
Zsp2I ATGCAT 1 cut(s) 274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.