Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006076

Physical Location & Seq

Genomic Coordinates Forward (+)

32115818 .. 32117520

Gene Structure 1703 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G341900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 984 bp

ATGACCAAGTCTTTCTCTTTCACGTCCCATGCAAATGTTGCATTCGCGATGTTGTTGCTTTTCTTCATCATGAGCACAGCAAGCCAAGCGCAACTGTCTTCAACATTCTATGACCGAACCTGCCCAAACGCTCTTGCTACTATCAAATCATCCATAAGCAGAGCAGTTTCGCAAGAACGCCGGATGGCGGCGTCCCTAATGCGCCTCCATTTCCATGATTGCTTTGTTCAGGGTTGTGACGCCTCACTCTTACTTAATGATTCTGCTTCTATCGTAAGCGAAAAGAACGCATTTCAAAACAGGGGTTCTGCTAGAGGCTTCGAAGTCATAGATGATGCAAAAGCTCAAGTGGAGAAGATTTGCCCTGGTGTTGTATCTTGCGCAGATATCCTTGCTGTGGCAGCTCGGGATGCATCAGTTGCTGTGAGTGGTCCATCTTGGACTGTGAAGCTTGGAAGAAGAGATGCGACCAGAGCAAGCCAAGCCCAAGCTGAAAGTGACCTTCCACTTTTCACAGACTCCCTTGACCGCCTTATTTCCAGATTTGGTGACAGAGGCCTCAGTCCCAGAGATCTGGTTGCGTTGTCAGGTGCACATACAATAGGGCAGGCTCAGTGCTTCACATTTCGTGACAGGATTTACAACAATGGAAGTGACATTGATTCTAACTTTGCAACTACTCGCAGACGCCGCTGTCCAGCTGCTGCACCCAACGGTAACACCAATTTGGCACCACTTGATTTGGTGACACCAAATTCATTCGACTACAATTACTTCAAGAATTTAATCCAGAAGAAGGGTCTTCTTGAATCAGATCAAGTTCTCTTTAGTGGAGGATCCACAGACAGCATTGTCTCTGAGTATAGTTCGAAACCCGCAACTTTTAGGTCTGATTTTGGAATCGCCATGATTAAGATGGGAGACGTTTCTCCTCTCACCGGTTCAGCTGGAGAGATCAGAAGGATTTGCACTGCTGTCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0006950 GO:0008150 GO:0009628 GO:0009987 GO:0033554 GO:0036293 GO:0036294 GO:0042221 GO:0050896 GO:0051716 GO:0070482 GO:0070887 GO:0071453 GO:0071456

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

328

Amino Acids

35.36

Weight (kDa)

8.63

Isoelectric Point (pI)

38.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14540 AT1G14550
fragaria_vesca	FvH4_2g30540 FvH4_4g13860 FvH4_4g36130
malus_domestica	MD13G1011000.v1.1 MD13G1011200.v1.1
prunus_persica	Prupe.1G341900_v2.0.a1
pyrus_communis	pycom13g00920
rosa_chinensis	RchiOBHm_Chr4g0445821 RchiOBHm_Chr4g0445871
rosa_laevigata	RLG00000005706 RLG00000005707
rosa_multiflora	Rmu_co8195238.1_g000001 Rmu_sc0000961.1_g000005 Rmu_sc0000961.1_g000010
rosa_roxburghii	Rroxscaffold_5G00386290 Rroxscaffold_5G00386310
rosa_rugosa	Rorug04G0365400
rosa_samantha	Rh4AG426900 Rh4AG427100 Rh4BG437300 Rh4CG454100 Rh4DG435200 Rh4DG435400
rosa_wichuraiana	Rw4G036540 Rw4G036570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	693, 851
Acc16I	TGCGCA	1 cut(s)	382
Acc36I	ACCTGC	1 cut(s)	128
AccB1I	GGYRCC	1 cut(s)	730
AccII	CGCG	1 cut(s)	47
AciI	CCGC	4 cut(s)	188, 529, 691, 876
AclWI	GGATC	2 cut(s)	831, 844
AcsI	RAATTY	2 cut(s)	754, 781
AcyI	GRCGYC	3 cut(s)	191, 240, 688
AfiI	CCNNNNNNNGG	4 cut(s)	187, 397, 796, 938
AgeI	ACCGGT	1 cut(s)	938
AgsI	TTSAA	4 cut(s)	102, 296, 778, 809
AjiI	CACGTC	1 cut(s)	24
AjnI	CCWGG	1 cut(s)	364
AluBI	AGCT	6 cut(s)	344, 404, 451, 491, 701, 947
AluI	AGCT	6 cut(s)	344, 404, 451, 491, 701, 947
Alw21I	GWGCWC	2 cut(s)	77, 595
Alw26I	GTCTC	2 cut(s)	859, 915
Alw44I	GTGCAC	1 cut(s)	591
AlwI	GGATC	2 cut(s)	831, 844
AlwNI	CAGNNNCTG	2 cut(s)	422, 704
Ama87I	CYCGRG	1 cut(s)	405
AoxI	GGCC	1 cut(s)	556
ApaLI	GTGCAC	1 cut(s)	591
ApeKI	GCWGC	3 cut(s)	401, 701, 704
ApoI	RAATTY	2 cut(s)	754, 781
AsiGI	ACCGGT	1 cut(s)	938
AspLEI	GCGC	3 cut(s)	91, 204, 383
AspS9I	GGNCC	1 cut(s)	431
AsuHPI	GGTGA	3 cut(s)	560, 757, 928
AsuII	TTCGAA	2 cut(s)	321, 869
AvaI	CYCGRG	1 cut(s)	405
AvaII	GGWCC	1 cut(s)	431
BaeGI	GKGCMC	1 cut(s)	595
BamHI	GGATCC	1 cut(s)	836
BanI	GGYRCC	1 cut(s)	730
BbsI	GAAGAC	2 cut(s)	90, 794
Bbv12I	GWGCWC	2 cut(s)	77, 595
BbvI	GCAGC	3 cut(s)	413, 688, 691
BccI	CCATC	3 cut(s)	178, 442, 910
BcgI	CGANNNNNNTGC	2 cut(s)	37, 71
BciT130I	CCWGG	1 cut(s)	366
BcoDI	GTCTC	2 cut(s)	859, 915
BfaI	CTAG	1 cut(s)	312
BfuAI	ACCTGC	1 cut(s)	128
BglII	AGATCT	1 cut(s)	571
BisI	GCNGC	5 cut(s)	189, 402, 691, 702, 705
BlsI	GCNGC	5 cut(s)	190, 403, 692, 703, 706
Bme1390I	CCNGG	1 cut(s)	366
Bme18I	GGWCC	1 cut(s)	431
BmeT110I	CYCGRG	1 cut(s)	405
BmgBI	CACGTC	1 cut(s)	24
BmgT120I	GGNCC	1 cut(s)	431
BmiI	GGNNCC	2 cut(s)	732, 838
BmrFI	CCNGG	1 cut(s)	366
BmsI	GCATC	4 cut(s)	325, 400, 422, 454
BpiI	GAAGAC	2 cut(s)	90, 794
BpmI	CTGGAG	1 cut(s)	969
Bpu14I	TTCGAA	2 cut(s)	321, 869
BpuEI	CTTGAG	1 cut(s)	330
BsaHI	GRCGYC	3 cut(s)	191, 240, 688
BsaJI	CCNNGG	1 cut(s)	364
BsaWI	WCCGGW	1 cut(s)	938
Bsc4I	CCNNNNNNNGG	4 cut(s)	187, 397, 796, 938
Bse118I	RCCGGY	1 cut(s)	938
BseBI	CCWGG	1 cut(s)	366
BseDI	CCNNGG	1 cut(s)	364
BseGI	GGATG	3 cut(s)	149, 189, 415
BseLI	CCNNNNNNNGG	4 cut(s)	187, 397, 796, 938
BseMII	CTCAG	3 cut(s)	574, 626, 849
BseRI	GAGGAG	1 cut(s)	921
BseSI	GKGCMC	1 cut(s)	595
BseXI	GCAGC	3 cut(s)	413, 688, 691
BsgI	GTGCAG	1 cut(s)	690
Bsh1236I	CGCG	1 cut(s)	47
BshFI	GGCC	1 cut(s)	558
BshNI	GGYRCC	1 cut(s)	730
BshTI	ACCGGT	1 cut(s)	938
BsiHKAI	GWGCWC	2 cut(s)	77, 595
BsiHKCI	CYCGRG	1 cut(s)	405
BsiSI	CCGG	2 cut(s)	181, 939
BslFI	GGGAC	3 cut(s)	10, 178, 549
BslI	CCNNNNNNNGG	4 cut(s)	187, 397, 796, 938
BsmAI	GTCTC	2 cut(s)	859, 915
BsmBI	CGTCTC	1 cut(s)	915
BsmFI	GGGAC	3 cut(s)	10, 178, 549
BsmI	GAATGC	1 cut(s)	41
BsnI	GGCC	1 cut(s)	558
BsoBI	CYCGRG	1 cut(s)	405
Bsp119I	TTCGAA	2 cut(s)	321, 869
Bsp1286I	GDGCHC	2 cut(s)	77, 595
Bsp143I	GATC	4 cut(s)	571, 814, 836, 954
Bsp68I	TCGCGA	1 cut(s)	47
BspACI	CCGC	4 cut(s)	188, 529, 691, 876
BspANI	GGCC	1 cut(s)	558
BspCNI	CTCAG	3 cut(s)	573, 625, 850
BspFNI	CGCG	1 cut(s)	47
BspHI	TCATGA	1 cut(s)	69
BspLI	GGNNCC	2 cut(s)	732, 838
BspMI	ACCTGC	1 cut(s)	128
BspPI	GGATC	2 cut(s)	831, 844
BspT104I	TTCGAA	2 cut(s)	321, 869
BspT107I	GGYRCC	1 cut(s)	730
BsrFI	RCCGGY	1 cut(s)	938
BssAI	RCCGGY	1 cut(s)	938
BssECI	CCNNGG	1 cut(s)	364
BssMI	GATC	4 cut(s)	571, 814, 836, 954
BssNI	GRCGYC	3 cut(s)	191, 240, 688
Bst2UI	CCWGG	1 cut(s)	366
Bst4CI	ACNGT	3 cut(s)	96, 445, 716
Bst6I	CTCTTC	1 cut(s)	454
BstACI	GRCGYC	3 cut(s)	191, 240, 688
BstAPI	GCANNNNNTGC	2 cut(s)	38, 419
BstBI	TTCGAA	2 cut(s)	321, 869
BstC8I	GCNNGC	3 cut(s)	82, 478, 609
BstDEI	CTNAG	3 cut(s)	560, 612, 858
BstF5I	GGATG	3 cut(s)	149, 189, 415
BstFNI	CGCG	1 cut(s)	47
BstHHI	GCGC	3 cut(s)	91, 204, 383
BstKTI	GATC	4 cut(s)	574, 817, 839, 957
BstMAI	GTCTC	2 cut(s)	859, 915
BstMBI	GATC	4 cut(s)	571, 814, 836, 954
BstMWI	GCNNNNNNNGC	9 cut(s)	38, 81, 86, 401, 410, 419, 473, 482, 690
BstNI	CCWGG	1 cut(s)	366
BstSCI	CCNGG	1 cut(s)	364
BstSLI	GKGCMC	1 cut(s)	595
BstUI	CGCG	1 cut(s)	47
BstV1I	GCAGC	3 cut(s)	413, 688, 691
BstV2I	GAAGAC	2 cut(s)	90, 794
BstX2I	RGATCY	2 cut(s)	571, 836
BstXI	CCANNNNNNTGG	1 cut(s)	574
BstYI	RGATCY	2 cut(s)	571, 836
BsuRI	GGCC	1 cut(s)	558
BtgZI	GCGATG	1 cut(s)	62
BtrI	CACGTC	1 cut(s)	24
BtsCI	GGATG	3 cut(s)	149, 189, 415
BtsI	GCAGTG	1 cut(s)	969
BtsIMutI	CAGTG	2 cut(s)	620, 969
BtuMI	TCGCGA	1 cut(s)	47
BveI	ACCTGC	1 cut(s)	128
Cac8I	GCNNGC	3 cut(s)	82, 478, 609
CaiI	CAGNNNCTG	2 cut(s)	422, 704
CciI	TCATGA	1 cut(s)	69
CfoI	GCGC	3 cut(s)	91, 204, 383
Cfr10I	RCCGGY	1 cut(s)	938
Cfr13I	GGNCC	1 cut(s)	431
CseI	GACGC	3 cut(s)	180, 248, 696
CspAI	ACCGGT	1 cut(s)	938
CspCI	CAANNNNNGTGG	2 cut(s)	723, 758
CviAII	CATG	4 cut(s)	29, 70, 215, 907
DdeI	CTNAG	3 cut(s)	560, 612, 858
DpnI	GATC	4 cut(s)	573, 816, 838, 956
DpnII	GATC	4 cut(s)	571, 814, 836, 954
DrdI	GACNNNNNNGTC	2 cut(s)	693, 851
DseDI	GACNNNNNNGTC	2 cut(s)	693, 851
Eam1104I	CTCTTC	1 cut(s)	454
EarI	CTCTTC	1 cut(s)	454
Eco147I	AGGCCT	1 cut(s)	558
Eco32I	GATATC	1 cut(s)	388
Eco47I	GGWCC	1 cut(s)	431
Eco88I	CYCGRG	1 cut(s)	405
EcoRII	CCWGG	1 cut(s)	364
EcoRV	GATATC	1 cut(s)	388
EcoT22I	ATGCAT	1 cut(s)	415
Esp3I	CGTCTC	1 cut(s)	915
FaeI	CATG	4 cut(s)	32, 73, 218, 910
FaiI	YATR	9 cut(s)	30, 71, 111, 155, 216, 329, 597, 864, 908
FaqI	GGGAC	3 cut(s)	10, 178, 549
FatI	CATG	4 cut(s)	28, 69, 214, 906
FauI	CCCGC	1 cut(s)	883
Fnu4HI	GCNGC	5 cut(s)	189, 402, 691, 702, 705
FokI	GGATG	3 cut(s)	136, 196, 422
Fsp4HI	GCNGC	5 cut(s)	189, 402, 691, 702, 705
FspBI	CTAG	1 cut(s)	312
FspI	TGCGCA	1 cut(s)	382
GlaI	GCGC	3 cut(s)	90, 203, 382
GluI	GCNGC	5 cut(s)	189, 402, 691, 702, 705
GsuI	CTGGAG	1 cut(s)	969
HaeIII	GGCC	1 cut(s)	558
HapII	CCGG	2 cut(s)	181, 939
HgaI	GACGC	3 cut(s)	180, 248, 696
HhaI	GCGC	3 cut(s)	91, 204, 383
Hin1I	GRCGYC	3 cut(s)	191, 240, 688
Hin1II	CATG	4 cut(s)	32, 73, 218, 910
Hin6I	GCGC	3 cut(s)	89, 202, 381
HinP1I	GCGC	3 cut(s)	89, 202, 381
HincII	GTYRAC	1 cut(s)	979
HindII	GTYRAC	1 cut(s)	979
HindIII	AAGCTT	1 cut(s)	449
HinfI	GANTC	5 cut(s)	260, 518, 662, 809, 900
HpaII	CCGG	2 cut(s)	181, 939
HphI	GGTGA	3 cut(s)	560, 757, 928
Hpy166II	GTNNAC	2 cut(s)	593, 979
Hpy188I	TCNGA	4 cut(s)	814, 859, 892, 959
Hpy188III	TCNNGA	8 cut(s)	46, 70, 407, 540, 629, 778, 790, 806
Hpy8I	GTNNAC	2 cut(s)	593, 979
HpyAV	CCTTC	3 cut(s)	512, 790, 954
HpyCH4III	ACNGT	3 cut(s)	96, 445, 716
HpyCH4IV	ACGT	2 cut(s)	23, 924
HpyCH4V	TGCA	8 cut(s)	32, 41, 338, 413, 593, 674, 707, 969
HpyF10VI	GCNNNNNNNGC	9 cut(s)	38, 81, 86, 401, 410, 419, 473, 482, 690
HpyF3I	CTNAG	3 cut(s)	560, 612, 858
HpySE526I	ACGT	2 cut(s)	23, 924
Hsp92I	GRCGYC	3 cut(s)	191, 240, 688
Hsp92II	CATG	4 cut(s)	32, 73, 218, 910
HspAI	GCGC	3 cut(s)	89, 202, 381
Kzo9I	GATC	4 cut(s)	571, 814, 836, 954
Lsp1109I	GCAGC	3 cut(s)	413, 688, 691
LweI	GCATC	4 cut(s)	325, 400, 422, 454
MaeI	CTAG	1 cut(s)	312
MaeII	ACGT	2 cut(s)	23, 924
MaeIII	GTNAC	7 cut(s)	236, 497, 548, 629, 653, 716, 745
MalI	GATC	4 cut(s)	573, 816, 838, 956
MboI	GATC	4 cut(s)	571, 814, 836, 954
MboII	GAAGA	7 cut(s)	55, 90, 367, 468, 471, 794, 805
MflI	RGATCY	2 cut(s)	571, 836
MhlI	GDGCHC	2 cut(s)	77, 595
MluCI	AATT	4 cut(s)	724, 754, 769, 781
MlyI	GAGTC	1 cut(s)	512
MnlI	CCTC	7 cut(s)	215, 253, 308, 548, 569, 827, 942
Mph1103I	ATGCAT	1 cut(s)	415
MseI	TTAA	3 cut(s)	255, 785, 912
MslI	CAYNNNNRTG	2 cut(s)	33, 213
MspA1I	CMGCKG	3 cut(s)	693, 701, 947
MspI	CCGG	2 cut(s)	181, 939
MspR9I	CCNGG	1 cut(s)	366
Mva1269I	GAATGC	1 cut(s)	41
MvaI	CCWGG	1 cut(s)	366
MvnI	CGCG	1 cut(s)	47
MwoI	GCNNNNNNNGC	9 cut(s)	38, 81, 86, 401, 410, 419, 473, 482, 690
NdeII	GATC	4 cut(s)	571, 814, 836, 954
NlaIII	CATG	4 cut(s)	32, 73, 218, 910
NlaIV	GGNNCC	2 cut(s)	732, 838
NmuCI	GTSAC	6 cut(s)	236, 497, 548, 629, 653, 745
NruI	TCGCGA	1 cut(s)	47
NsbI	TGCGCA	1 cut(s)	382
NsiI	ATGCAT	1 cut(s)	415
NspV	TTCGAA	2 cut(s)	321, 869
PagI	TCATGA	1 cut(s)	69
PceI	AGGCCT	1 cut(s)	558
PctI	GAATGC	1 cut(s)	41
PfeI	GAWTC	4 cut(s)	260, 662, 809, 900
PflFI	GACNNNGTC	1 cut(s)	7
PinAI	ACCGGT	1 cut(s)	938
PkrI	GCNGC	5 cut(s)	190, 403, 692, 703, 706
PleI	GAGTC	1 cut(s)	512
PpsI	GAGTC	1 cut(s)	512
Psp6I	CCWGG	1 cut(s)	364
PspGI	CCWGG	1 cut(s)	364
PspN4I	GGNNCC	2 cut(s)	732, 838
PspPI	GGNCC	1 cut(s)	431
PstNI	CAGNNNCTG	2 cut(s)	422, 704
PsuI	RGATCY	2 cut(s)	571, 836
PsyI	GACNNNGTC	1 cut(s)	7
PvuII	CAGCTG	2 cut(s)	701, 947
RruI	TCGCGA	1 cut(s)	47
RseI	CAYNNNNRTG	2 cut(s)	33, 213
SaqAI	TTAA	3 cut(s)	255, 785, 912
SatI	GCNGC	5 cut(s)	189, 402, 691, 702, 705
Sau3AI	GATC	4 cut(s)	571, 814, 836, 954
Sau96I	GGNCC	1 cut(s)	431
SchI	GAGTC	1 cut(s)	512
ScrFI	CCNGG	1 cut(s)	366
SduI	GDGCHC	2 cut(s)	77, 595
SfaNI	GCATC	4 cut(s)	325, 400, 422, 454
SfuI	TTCGAA	2 cut(s)	321, 869
SinI	GGWCC	1 cut(s)	431
SmiMI	CAYNNNNRTG	2 cut(s)	33, 213
SmlI	CTYRAG	1 cut(s)	345
SmoI	CTYRAG	1 cut(s)	345
Sse9I	AATT	4 cut(s)	724, 754, 769, 781
SseBI	AGGCCT	1 cut(s)	558
SsiI	CCGC	4 cut(s)	188, 529, 691, 876
SspMI	CTAG	1 cut(s)	312
StuI	AGGCCT	1 cut(s)	558
StyD4I	CCNGG	1 cut(s)	364
TaaI	ACNGT	3 cut(s)	96, 445, 716
TaiI	ACGT	2 cut(s)	26, 927
TaqI	TCGA	3 cut(s)	321, 762, 869
TaqII	GACCGA	1 cut(s)	129
TasI	AATT	4 cut(s)	724, 754, 769, 781
TauI	GCSGC	2 cut(s)	191, 693
TfiI	GAWTC	4 cut(s)	260, 662, 809, 900
Tru1I	TTAA	3 cut(s)	255, 785, 912
Tru9I	TTAA	3 cut(s)	255, 785, 912
TscAI	CASTG	2 cut(s)	620, 976
TseFI	GTSAC	6 cut(s)	236, 497, 548, 629, 653, 745
TseI	GCWGC	3 cut(s)	401, 701, 704
Tsp45I	GTSAC	6 cut(s)	236, 497, 548, 629, 653, 745
TspDTI	ATGAA	2 cut(s)	55, 747
TspRI	CASTG	2 cut(s)	620, 976
Tth111I	GACNNNGTC	1 cut(s)	7
VneI	GTGCAC	1 cut(s)	591
VpaK11BI	GGWCC	1 cut(s)	431
XapI	RAATTY	2 cut(s)	754, 781
XcmI	CCANNNNNNNNNTGG	1 cut(s)	913
XspI	CTAG	1 cut(s)	312
Zsp2I	ATGCAT	1 cut(s)	415

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.