AT1G15210
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0002725
Physical Location & Seq
Reverse (-)
5231345 .. 5236886
5542 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G15210.1

Sequence Viewer

Length: 4329 bp
ATGGATTACGATCCAGCTCATGCTATGAGCAGAGGTGGGAGTATGCGGCAAACCATAAGTCGTAGTGTAAGCAAAGCAAGCAGAAACATGGAAGACATATTCAATACAAGCTCTAGACGAACCAAATCTGTCAACGAAGACGAAGAAGCTCTCAAATGGGCTTCCATCGAGAAACTCCCTACCTACAACCGTCTCCGCACAAGTCTCATGCCTGAATTAGGCGAAGACGACGTCTACGGTAACCAAATCCTCAACAAAGCAGTTGACGTCACGAAGCTTGACGGCGAAGAACGTCAGAAGTTCATCGACATGGTCTTCAAAGTCGCAGAGCAGGACAACGAACGGATCTTGACAAAGCTAAGAAACAGAATCGACAGAGTTGGGATCCAACTTCCGACAGTAGAAGTGAGGTACGACCACTTGACTGTGAAAGCTGACTGTTACACCGGTGATAGATCTCTTCCTTCGCTTCTTAACGCGGTGAGAAACATGGGAGAAGCTGCTCTAGGCATGATCGGAATTAGGCTTGCCAAGAAAGCACAACTTACTATTCTCAAAGATGTTTCTGGTATCGTCAAACCTTCAAGGATGACACTTTTGTTGGGTCCTCCGTCTTCCGGGAAGACCACGCTTTTGTTGGCTCTTGCCGGTAAACTCGACAAGTCTCTTGACGTCTCTGGGGAGGTAACCTATAATGGTTATCGCCTCAATGAGTTTGTTCCCATTAAAACATCTGCTTACATTAGTCAGAACGATCTTCATGTTGGTATCATGACTGTTAAGGAGACTCTTGATTTCTCTGCTAGGTGTCAAGGAGTTGGTACCCGTTACGATCTTTTAAATGAGTTGGCAAGAAGAGAAAAGGACGCTGGGATTTTTCCAGAAGCTGATGTTGATTTGTTCATGAAGGCCTCTGCTGCTCAAGGCGTCAAGAGTAGTCTTATCACTGATTATACTCTCAAAATTCTAGGGCTTGACATTTGCAAGGACACTATAGTTGGAGATGACATGATGAGAGGTATTTCAGGAGGTCAGAAGAAGCGTGTGACAACTGGTGAGATGATCGTTGGACCTACTAAGACTCTGTTCATGGATGAGATATCCACCGGACTTGACAGCTCCACGACTTTCCAAATCGTGAAATGCTTGCAACAGATTGTTCACCTCACAGAAGCCACAGTTCTTATATCTCTTCTCCAGCCTGCTCCTGAGACGTTTGATCTATTCGATGATATAATCTTATTGTCGGAGGGACAGATTGTGTACCAGGGACCTAGAGACCATATTCTAGAGTTCTTTGAGAGCTTTGGGTTCAAGTGCCCTGAAAGAAAAGGAACAGCTGATTTCTTGCAAGAGGTTACCTCAAAGAAAGATCAAGAACAGTATTGGGTTGATCCAAACAGACCCTATAGATACATTCCAGTGTCGGAGTTTGCCAGCAGCTTTAAGAAATTCCATGTTGGATCTAAACTATCTAACGAGCTATCAGTACCGTACGACAAGTCTAAAAGCCACAAAGCAGCTCTAATGTTTGACAAATACTCAATCAAGAAAACAGAGCTTCTGAAAAGCTGTTGGGACAAAGAGTGGATGCTCATGAAGCGAAACTCCTTCTTCTATGTCTTCAAAACCGTCCAAATCATCATCATTGCCGCAATCACCTCAACACTTTACCTTAGAACTGAAATGCACACAAGGAATGAGATTGACGCCAACATCTACGTCGGATCACTGCTATTCGCAATGATTGTCAACATGTTTAACGGTCTTGCAGAGATGGCCATGACGATACAGAGACTTCCCGTGTTCTACAAGCAAAGGGATCTTTTGTTTCACCCACCATGGACATACACGCTTCCCACTTTCTTGCTAGGGATTCCAATCTCCATCTTCGAGTCTACAGCATGGATGGTGGTGACATATTACTCCATAGGATATGCACCCGATGCGGAACGGTTCTTTAAACAGTTCTTGATTATATTCTTGATCCAACAAATGGCTGCTGGGATATTCAGGTTCATTGCATCTACATGTAGAACCATGACCATAGCTAATACCGGCGGTGTCCTTGTTCTACTAGTGGTGTTCTTGACTGGAGGTTTCCTTCTTCCTCGAAGTGAGATTCCGGTTTGGTGGAGATGGGCTTATTGGATATCCCCTCTTTCTTACGCTTTCAATGCCATCACCGTCAATGAATTGTTTGCTCCTAGATGGATGAATAAAATGTCTGGCAACAGCACAACGAGGTTGGGAACAAGTGTGCTTAATATTTGGGATGTATTTGATGATAAGAACTGGTACTGGATAGGAGTTGGAGGCTTGCTTGGTTTTACTGTCATTTTCAACGGCTTTTTTACATTGGCACTTACTTATCTAGACCCCCTTGGGAAGGCACAAGCTATACTTCCAAAAGAAGAAGACGAAGAGGCTAAAGGCAAAGCTGGATCCAATAAGGAGACTGAGATGGAGAGTGTGAGCGCCAAGAAAGGAATGGTTCTTCCTTTCACTCCTCTAGCTATGTCATTTGACGATGTTAAATACTTTGTTGACATGCCTGCGGAAATGAGGGAACAAGGAGTTCAAGAAACGAGGCTGCAACTTCTAAAAGGAGTGACAAGCGCATTTAGGCCAGGAGTTTTAACTGCGTTGATGGGGGTGAGCGGTGCGGGTAAGACAACTTTGATGGACGTTTTGGCCGGAAGGAAAACAGGTGGATACATAGAAGGAGACGTAAGAGTATCTGGATTCCCAAAGAAACAAGAGACTTTTGCTAGAATCTCTGGTTACTGTGAACAAACAGACATTCACTCTCCACAAGTCACAGTAAGAGAATCACTTATCTTCTCTGCTTTCCTTCGCCTTGCTAAGGAAGTAAGCAAAGAGGATAAATTGATGTTTGTGGATCAAGTTATGGAGTTAGTGGAGTTGGTGGATCTGAGAGATGCAATTGTTGGTTTACCGGGGGTCACAGGGCTTTCCACGGAACAGAGAAAGAGATTAACAATCGCTGTTGAGCTTGTAGCTAACCCTTCAATCATCTTCATGGACGAGCCAACTTCAGGGTTGGATGCTAGAGCAGCTGCTATTGTTATGAGAGCTGTGAGAAACACAGTGGACACAGGGAGAACTGTTGTGTGCACCATCCACCAACCGAGCATTGATATCTTTGAGGCCTTTGACGAACTACTACTAATGAAGAGAGGAGGACATGTGATCTACTCTGGTCCCTTAGGCCGAAACTCTCACAAGGTTGTTGAGTACTTTGAATCCTTCCCTGGAGTGCCAAAGATTCCGGAAAAATACAACCCGGCCACTTGGATGCTGGAAGCTAGCTCCCTTGCGGCCGAGTTAAAGCTTGGAGTTGACTTTGCTGAGCTATATAAGGCTTCAGCCTTATGCCAGCGGAACAAGGCGCTGGTGCAAGAACTAAGCGTGCCTCCCCAAGGAGCGACTGATCTCTACTTTGCCACACAGTTTTCACAGAACACATGGGGACAATTCAAATCATGTCTATGGAAGCAGTGGTGGACTTATTGGAGATCTCCTGACTACAACCTTGTCAGGTTCATCTTCACATTGGCAACATCTCTCATGATCGGCTCTGTCTTCTGGCAAATCGGAGGTAAGAGATCAAACGTACAAGATCTAACGATGGTGATCGGAGCAATCTACGCAGCAGTTGTATTCGTTGGTATAAACAACTGCTCAACAGTACAACCAATGGTGGCAGTGGAAAGAACAGTGTTCTACAGAGAAAAAGCTGCTGGGATGTACTCAGCTATACCTTATGCTATCTCCCAGGTGACTTGTGAACTACCTTATGTCTTGATTCAGACCACGTACTATTCTCTTATCATCTACTCTATGGTTGGATTCGAGTGGAAAGCTTCCAAGTTCTTGTGGTTTATCTTCATCAATTACTTCTCCTTCCTCTACTGGACCTACTACGGCATGATGACAGTTTCCCTCACACCTAACCAACAAGTAGCTTCTATCTTTGCATCAGCCTTTTATGGTATCTTTAACCTCTTCTCTGGATTTTTCATCCCTAGACCCAAAATTCCAAAGTGGTGGGTTTGGTATTACTGGATCTGCCCTGTTGCTTGGACCATATACGGTTTGATCACTTCTCAATACGGTGACGTTGAGACTCCCATCGCTCTCCTTGGTGGTGCACCTGGCCTCACTGTTAAACAGTACATTAAAGATCAATATGGTTTTGAATCAGACTACATGGGACCTGTGGCCGGAGTACTAGTTGGCTTCACTGTCTTTTTTGCCTTCATCTTCGCATTTTGCATCAAGACTCTCAACTTCCAGTCTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000041 GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005886 GO:0006082 GO:0006725 GO:0006790 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008324 GO:0009056 GO:0009507 GO:0009526 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009814 GO:0009817 GO:0009889 GO:0009941 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0015075 GO:0015086 GO:0015318 GO:0015399 GO:0015405 GO:0015691 GO:0015850 GO:0015893 GO:0016020 GO:0016021 GO:0016043 GO:0016143 GO:0016145 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019439 GO:0019748 GO:0019757 GO:0019759 GO:0019760 GO:0019762 GO:0022804 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031323 GO:0031326 GO:0031347 GO:0031348 GO:0031967 GO:0031975 GO:0032870 GO:0033036 GO:0033037 GO:0033554 GO:0033993 GO:0034220 GO:0034641 GO:0042221 GO:0042343 GO:0042344 GO:0042430 GO:0042436 GO:0042493 GO:0042545 GO:0042623 GO:0042626 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043455 GO:0043492 GO:0044237 GO:0044248 GO:0044270 GO:0044273 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045229 GO:0046483 GO:0046700 GO:0046873 GO:0046915 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0055085 GO:0065007 GO:0070574 GO:0070727 GO:0070838 GO:0070887 GO:0071229 GO:0071310 GO:0071365 GO:0071366 GO:0071407 GO:0071417 GO:0071495 GO:0071554 GO:0071555 GO:0071702 GO:0071704 GO:0071840 GO:0071944 GO:0072511 GO:0080026 GO:0080134 GO:0097305 GO:0098542 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1900376 GO:1901135 GO:1901136 GO:1901140 GO:1901141 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901657 GO:1901658 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:2000762
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1442

Amino Acids

162.57

Weight (kDa)

8.07

Isoelectric Point (pI)

32.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 110 - 160 1.1e-06 ABC-transporter N-terminal
ABC_tran PF00005 185 - 366 2.9e-12 ABC transporter
ABC2_membrane_7 PF19055 400 - 454 3.9e-06 ABC-2 type transporter
ABC2_membrane PF01061 521 - 733 1e-53 ABC-2 type transporter
PDR_assoc PF08370 738 - 801 4e-25 Plant PDR ABC transporter associated
ABC_tran PF00005 868 - 1020 5.9e-20 ABC transporter
ABC2_membrane_7 PF19055 1049 - 1108 1.1e-06 ABC-2 type transporter
ABC2_membrane PF01061 1166 - 1379 7.3e-61 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 234, 270, 675
Acc65I GGTACC 1 cut(s) 821
AccB1I GGYRCC 1 cut(s) 821
AccB7I CCANNNNNTGG 1 cut(s) 1996
AccBSI CCGCTC 1 cut(s) 2661
AccI GTMKAC 2 cut(s) 234, 1898
AccII CGCG 1 cut(s) 479
AccIII TCCGGA 1 cut(s) 3292
AcoI YGGCCR 5 cut(s) 1779, 2694, 3309, 3342, 4245
AcsI RAATTY 3 cut(s) 963, 1451, 4059
AcuI CTGAAG 2 cut(s) 3042, 3372
AcyI GRCGYC 5 cut(s) 231, 267, 672, 927, 1710
AfiI CCNNNNNNNGG 8 cut(s) 218, 617, 1996, 2389, 2866, 3059, 3443, 4247
AflIII ACRYGT 3 cut(s) 1755, 2030, 3208
AgeI ACCGGT 1 cut(s) 446
AhlI ACTAGT 2 cut(s) 2077, 4255
AjnI CCWGG 5 cut(s) 1266, 2629, 3274, 3798, 4177
Alw21I GWGCWC 2 cut(s) 3140, 4177
Alw44I GTGCAC 2 cut(s) 3136, 4173
AlwNI CAGNNNCTG 1 cut(s) 887
Aor13HI TCCGGA 1 cut(s) 3292
ApaLI GTGCAC 2 cut(s) 3136, 4173
ApoI RAATTY 3 cut(s) 963, 1451, 4059
ArsI GACNNNNNNTTYG 6 cut(s) 43, 75, 216, 248, 616, 648
AsiGI ACCGGT 1 cut(s) 446
Asp718I GGTACC 1 cut(s) 821
AspLEI GCGC 3 cut(s) 2480, 2621, 3415
AspS9I GGNCC 7 cut(s) 605, 1070, 1271, 3224, 3939, 4107, 4238
AsuC2I CCSGG 3 cut(s) 619, 2961, 3308
AsuNHI GCTAGC 1 cut(s) 3329
AvaII GGWCC 7 cut(s) 605, 1070, 1271, 3224, 3939, 4107, 4238
AxyI CCTNAGG 1 cut(s) 3229
BaeGI GKGCMC 3 cut(s) 1322, 3140, 4177
BalI TGGCCA 1 cut(s) 1781
BamHI GGATCC 2 cut(s) 384, 2444
BanI GGYRCC 1 cut(s) 821
BbsI GAAGAC 9 cut(s) 99, 144, 231, 307, 606, 629, 1615, 2424, 3598
Bbv12I GWGCWC 2 cut(s) 3140, 4177
BceAI ACGGC 3 cut(s) 298, 2362, 3964
BciT130I CCWGG 5 cut(s) 1268, 2631, 3276, 3800, 4179
BciVI GTATCC 1 cut(s) 2708
BclI TGATCA 1 cut(s) 4122
BcnI CCSGG 3 cut(s) 619, 2961, 3308
BcuI ACTAGT 2 cut(s) 2077, 4255
BfmI CTRYAG 4 cut(s) 993, 1408, 1899, 3748
BfoI RGCGCY 2 cut(s) 2481, 3416
BfuI GTATCC 1 cut(s) 2708
BglII AGATCT 3 cut(s) 455, 3539, 3643
BlpI GCTNAGC 1 cut(s) 3372
BmcAI AGTACT 2 cut(s) 3260, 4254
Bme1390I CCNGG 8 cut(s) 619, 1268, 2631, 2961, 3276, 3308, 3800, 4179
Bme18I GGWCC 7 cut(s) 605, 1070, 1271, 3224, 3939, 4107, 4238
BmgT120I GGNCC 7 cut(s) 605, 1070, 1271, 3224, 3939, 4107, 4238
BmiI GGNNCC 7 cut(s) 386, 606, 823, 1272, 2446, 3226, 4239
BmrFI CCNGG 8 cut(s) 619, 1268, 2631, 2961, 3276, 3308, 3800, 4179
BmsI GCATC 8 cut(s) 1581, 1936, 2033, 2932, 3058, 3309, 4010, 4308
BmtI GCTAGC 1 cut(s) 3333
BpiI GAAGAC 9 cut(s) 99, 144, 231, 307, 606, 629, 1615, 2424, 3598
BplI GAGNNNNNCTC 2 cut(s) 1346, 1378
BpmI CTGGAG 3 cut(s) 1181, 2115, 3297
Bpu10I CCTNAGC 1 cut(s) 2865
Bpu1102I GCTNAGC 1 cut(s) 3372
BpuEI CTTGAG 1 cut(s) 906
BpuMI CCSGG 3 cut(s) 619, 2961, 3308
BsaAI YACGTR 1 cut(s) 3840
BsaBI GATNNNNATC 3 cut(s) 9, 1880, 3656
BsaHI GRCGYC 5 cut(s) 231, 267, 672, 927, 1710
BsaI GGTCTC 1 cut(s) 1272
BsaJI CCNNGG 9 cut(s) 1267, 1841, 2383, 2960, 2979, 3274, 3442, 3798, 4165
BsaWI WCCGGW 4 cut(s) 446, 1106, 2125, 3292
BsaXI ACNNNNNCTCC 4 cut(s) 3195, 3225, 4242, 4272
Bsc4I CCNNNNNNNGG 8 cut(s) 218, 617, 1996, 2389, 2866, 3059, 3443, 4247
Bse118I RCCGGY 3 cut(s) 446, 647, 2057
Bse1I ACTGG 8 cut(s) 1057, 1421, 2098, 2300, 2306, 3941, 4091, 4318
Bse21I CCTNAGG 1 cut(s) 3229
Bse3DI GCAATG 3 cut(s) 1647, 1749, 2019
Bse8I GATNNNNATC 3 cut(s) 9, 1880, 3656
BseAI TCCGGA 1 cut(s) 3292
BseBI CCWGG 5 cut(s) 1268, 2631, 3276, 3800, 4179
BseDI CCNNGG 9 cut(s) 1267, 1841, 2383, 2960, 2979, 3274, 3442, 3798, 4165
BseJI GATNNNNATC 3 cut(s) 9, 1880, 3656
BseLI CCNNNNNNNGG 8 cut(s) 218, 617, 1996, 2389, 2866, 3059, 3443, 4247
BseMI GCAATG 3 cut(s) 1647, 1749, 2019
BseMII CTCAG 5 cut(s) 1200, 2451, 2927, 3363, 3789
BseNI ACTGG 8 cut(s) 1057, 1421, 2098, 2300, 2306, 3941, 4091, 4318
BseRI GAGGAG 2 cut(s) 2499, 3216
BseSI GKGCMC 3 cut(s) 1322, 3140, 4177
BseX3I CGGCCG 1 cut(s) 3342
BseYI CCCAGC 3 cut(s) 869, 2003, 3764
Bsh1236I CGCG 1 cut(s) 479
Bsh1285I CGRYCG 1 cut(s) 3345
BshNI GGYRCC 1 cut(s) 821
BshTI ACCGGT 1 cut(s) 446
BsiEI CGRYCG 1 cut(s) 3345
BsiHKAI GWGCWC 2 cut(s) 3140, 4177
BsiWI CGTACG 1 cut(s) 1494
BslFI GGGAC 6 cut(s) 1266, 1284, 1592, 3210, 3507, 4251
BslI CCNNNNNNNGG 8 cut(s) 218, 617, 1996, 2389, 2866, 3059, 3443, 4247
BsmBI CGTCTC 4 cut(s) 197, 679, 1205, 2721
BsmFI GGGAC 6 cut(s) 1266, 1284, 1592, 3210, 3507, 4251
Bso31I GGTCTC 1 cut(s) 1272
Bsp1286I GDGCHC 3 cut(s) 1322, 3140, 4177
Bsp13I TCCGGA 1 cut(s) 3292
Bsp1720I GCTNAGC 1 cut(s) 3372
Bsp19I CCATGG 1 cut(s) 1841
BspCNI CTCAG 5 cut(s) 1201, 2452, 2928, 3364, 3788
BspEI TCCGGA 1 cut(s) 3292
BspFNI CGCG 1 cut(s) 479
BspHI TCATGA 4 cut(s) 771, 903, 1596, 3591
BspLI GGNNCC 7 cut(s) 386, 606, 823, 1272, 2446, 3226, 4239
BspOI GCTAGC 1 cut(s) 3333
BspT107I GGYRCC 1 cut(s) 821
BspTNI GGTCTC 1 cut(s) 1272
BsrBI CCGCTC 1 cut(s) 2661
BsrDI GCAATG 3 cut(s) 1647, 1749, 2019
BsrFI RCCGGY 3 cut(s) 446, 647, 2057
BsrI ACTGG 8 cut(s) 1057, 1421, 2098, 2300, 2306, 3941, 4091, 4318
BssAI RCCGGY 3 cut(s) 446, 647, 2057
BssECI CCNNGG 9 cut(s) 1267, 1841, 2383, 2960, 2979, 3274, 3442, 3798, 4165
BssNI GRCGYC 5 cut(s) 231, 267, 672, 927, 1710
BssT1I CCWWGG 4 cut(s) 1841, 2383, 3442, 4165
Bst2UI CCWGG 5 cut(s) 1268, 2631, 3276, 3800, 4179
Bst6I CTCTTC 6 cut(s) 465, 850, 1197, 2418, 3191, 4034
BstACI GRCGYC 5 cut(s) 231, 267, 672, 927, 1710
BstAPI GCANNNNNTGC 1 cut(s) 1946
BstBAI YACGTR 1 cut(s) 3840
BstDSI CCRYGG 2 cut(s) 1841, 2979
BstEII GGTNACC 3 cut(s) 239, 685, 1357
BstENI CCTNNNNNAGG 4 cut(s) 216, 2387, 2864, 3441
BstFNI CGCG 1 cut(s) 479
BstH2I RGCGCY 2 cut(s) 2481, 3416
BstHHI GCGC 3 cut(s) 2480, 2621, 3415
BstMCI CGRYCG 1 cut(s) 3345
BstMWI GCNNNNNNNGC 9 cut(s) 78, 536, 917, 1600, 1778, 1946, 2177, 3077, 3671
BstNI CCWGG 5 cut(s) 1268, 2631, 3276, 3800, 4179
BstNSI RCATGY 4 cut(s) 1759, 2034, 2554, 3212
BstPI GGTNACC 3 cut(s) 239, 685, 1357
BstSCI CCNGG 8 cut(s) 617, 1266, 2629, 2959, 3274, 3306, 3798, 4177
BstSFI CTRYAG 4 cut(s) 993, 1408, 1899, 3748
BstSLI GKGCMC 3 cut(s) 1322, 3140, 4177
BstUI CGCG 1 cut(s) 479
BstV2I GAAGAC 9 cut(s) 99, 144, 231, 307, 606, 629, 1615, 2424, 3598
BstXI CCANNNNNNTGG 1 cut(s) 4071
BstZI CGGCCG 1 cut(s) 3342
Bsu36I CCTNAGG 1 cut(s) 3229
BsuI GTATCC 1 cut(s) 2708
BtgI CCRYGG 2 cut(s) 1841, 2979
BtgZI GCGATG 1 cut(s) 4141
BtsI GCAGTG 3 cut(s) 1730, 3527, 3735
BtsIMutI CAGTG 9 cut(s) 945, 1428, 1730, 3117, 3527, 3735, 3747, 4185, 4266
CaiI CAGNNNCTG 1 cut(s) 887
CciI TCATGA 4 cut(s) 771, 903, 1596, 3591
CfoI GCGC 3 cut(s) 2480, 2621, 3415
Cfr10I RCCGGY 3 cut(s) 446, 647, 2057
Cfr13I GGNCC 7 cut(s) 605, 1070, 1271, 3224, 3939, 4107, 4238
CseI GACGC 3 cut(s) 875, 916, 1718
CspAI ACCGGT 1 cut(s) 446
CspCI CAANNNNNGTGG 2 cut(s) 1093, 1128
DraI TTTAAA 2 cut(s) 840, 1963
EaeI YGGCCR 5 cut(s) 1779, 2694, 3309, 3342, 4245
EagI CGGCCG 1 cut(s) 3342
Eam1104I CTCTTC 6 cut(s) 465, 850, 1197, 2418, 3191, 4034
EarI CTCTTC 6 cut(s) 465, 850, 1197, 2418, 3191, 4034
EclXI CGGCCG 1 cut(s) 3342
Eco130I CCWWGG 4 cut(s) 1841, 2383, 3442, 4165
Eco147I AGGCCT 2 cut(s) 911, 3173
Eco31I GGTCTC 1 cut(s) 1272
Eco32I GATATC 3 cut(s) 1101, 2154, 3163
Eco47I GGWCC 7 cut(s) 605, 1070, 1271, 3224, 3939, 4107, 4238
Eco52I CGGCCG 1 cut(s) 3342
Eco57I CTGAAG 2 cut(s) 3042, 3372
Eco81I CCTNAGG 1 cut(s) 3229
Eco91I GGTNACC 3 cut(s) 239, 685, 1357
EcoNI CCTNNNNNAGG 4 cut(s) 216, 2387, 2864, 3441
EcoO109I RGGNCCY 3 cut(s) 605, 1271, 4238
EcoO65I GGTNACC 3 cut(s) 239, 685, 1357
EcoRII CCWGG 5 cut(s) 1266, 2629, 3274, 3798, 4177
EcoRV GATATC 3 cut(s) 1101, 2154, 3163
EcoT14I CCWWGG 4 cut(s) 1841, 2383, 3442, 4165
ErhI CCWWGG 4 cut(s) 1841, 2383, 3442, 4165
Esp3I CGTCTC 4 cut(s) 197, 679, 1205, 2721
FalI AAGNNNNNCTT 4 cut(s) 528, 560, 2388, 2420
FaqI GGGAC 6 cut(s) 1266, 1284, 1592, 3210, 3507, 4251
FauI CCCGC 1 cut(s) 2659
FbaI TGATCA 1 cut(s) 4122
FblI GTMKAC 2 cut(s) 234, 1898
GlaI GCGC 3 cut(s) 2479, 2620, 3414
GsaI CCCAGC 3 cut(s) 873, 2007, 3768
GsuI CTGGAG 3 cut(s) 1181, 2115, 3297
HaeII RGCGCY 2 cut(s) 2481, 3416
HgaI GACGC 3 cut(s) 875, 916, 1718
HhaI GCGC 3 cut(s) 2480, 2621, 3415
Hin1I GRCGYC 5 cut(s) 231, 267, 672, 927, 1710
Hin6I GCGC 3 cut(s) 2478, 2619, 3413
HinP1I GCGC 3 cut(s) 2478, 2619, 3413
HincII GTYRAC 5 cut(s) 133, 265, 1753, 2548, 3364
HindII GTYRAC 5 cut(s) 133, 265, 1753, 2548, 3364
HindIII AAGCTT 3 cut(s) 275, 3353, 3885
Hpy99I CGWCG 2 cut(s) 233, 1727
HpyF10VI GCNNNNNNNGC 9 cut(s) 78, 536, 917, 1600, 1778, 1946, 2177, 3077, 3671
Hsp92I GRCGYC 5 cut(s) 231, 267, 672, 927, 1710
HspAI GCGC 3 cut(s) 2478, 2619, 3413
Kpn2I TCCGGA 1 cut(s) 3292
KpnI GGTACC 1 cut(s) 825
Ksp22I TGATCA 1 cut(s) 4122
LmnI GCTCC 6 cut(s) 1124, 1210, 2209, 3338, 3446, 3662
LweI GCATC 8 cut(s) 1581, 1936, 2033, 2932, 3058, 3309, 4010, 4308
MbiI CCGCTC 1 cut(s) 2661
MfeI CAATTG 1 cut(s) 2946
MhlI GDGCHC 3 cut(s) 1322, 3140, 4177
MlsI TGGCCA 1 cut(s) 1781
MluNI TGGCCA 1 cut(s) 1781
MlyI GAGTC 5 cut(s) 781, 1075, 1904, 4144, 4300
Mox20I TGGCCA 1 cut(s) 1781
MroI TCCGGA 1 cut(s) 3292
MscI TGGCCA 1 cut(s) 1781
MslI CAYNNNNRTG 6 cut(s) 308, 1421, 2029, 3041, 3317, 3511
Msp20I TGGCCA 1 cut(s) 1781
MspA1I CMGCKG 3 cut(s) 1340, 3080, 3403
MspR9I CCNGG 8 cut(s) 619, 1268, 2631, 2961, 3276, 3308, 3800, 4179
MunI CAATTG 1 cut(s) 2946
MvaI CCWGG 5 cut(s) 1268, 2631, 3276, 3800, 4179
MvnI CGCG 1 cut(s) 479
MwoI GCNNNNNNNGC 9 cut(s) 78, 536, 917, 1600, 1778, 1946, 2177, 3077, 3671
NciI CCSGG 3 cut(s) 619, 2961, 3308
NcoI CCATGG 1 cut(s) 1841
NheI GCTAGC 1 cut(s) 3329
NlaIV GGNNCC 7 cut(s) 386, 606, 823, 1272, 2446, 3226, 4239
NmeAIII GCCGAG 1 cut(s) 3370
NmuCI GTSAC 8 cut(s) 268, 1045, 1915, 2611, 2818, 2965, 3802, 4139
NspI RCATGY 4 cut(s) 1759, 2034, 2554, 3212
PagI TCATGA 4 cut(s) 771, 903, 1596, 3591
PceI AGGCCT 2 cut(s) 911, 3173
PciI ACATGT 3 cut(s) 1755, 2030, 3208
Pfl23II CGTACG 1 cut(s) 1494
PflFI GACNNNGTC 2 cut(s) 230, 311
PflMI CCANNNNNTGG 1 cut(s) 1996
PfoI TCCNGGA 1 cut(s) 617
PinAI ACCGGT 1 cut(s) 446
PleI GAGTC 5 cut(s) 781, 1075, 1903, 4144, 4300
PpsI GAGTC 5 cut(s) 781, 1075, 1903, 4144, 4300
Ppu21I YACGTR 1 cut(s) 3840
PpuMI RGGWCCY 3 cut(s) 605, 1271, 4238
PscI ACATGT 3 cut(s) 1755, 2030, 3208
Psp5II RGGWCCY 3 cut(s) 605, 1271, 4238
Psp6I CCWGG 5 cut(s) 1266, 2629, 3274, 3798, 4177
PspEI GGTNACC 3 cut(s) 239, 685, 1357
PspFI CCCAGC 3 cut(s) 869, 2003, 3764
PspGI CCWGG 5 cut(s) 1266, 2629, 3274, 3798, 4177
PspLI CGTACG 1 cut(s) 1494
PspN4I GGNNCC 7 cut(s) 386, 606, 823, 1272, 2446, 3226, 4239
PspPI GGNCC 7 cut(s) 605, 1070, 1271, 3224, 3939, 4107, 4238
PspPPI RGGWCCY 3 cut(s) 605, 1271, 4238
PstNI CAGNNNCTG 1 cut(s) 887
PsyI GACNNNGTC 2 cut(s) 230, 311
PvuII CAGCTG 2 cut(s) 1340, 3080
RseI CAYNNNNRTG 6 cut(s) 308, 1421, 2029, 3041, 3317, 3511
Sau96I GGNCC 7 cut(s) 605, 1070, 1271, 3224, 3939, 4107, 4238
ScaI AGTACT 2 cut(s) 3260, 4254
SchI GAGTC 5 cut(s) 781, 1075, 1904, 4144, 4300
ScrFI CCNGG 8 cut(s) 619, 1268, 2631, 2961, 3276, 3308, 3800, 4179
SduI GDGCHC 3 cut(s) 1322, 3140, 4177
SfaNI GCATC 8 cut(s) 1581, 1936, 2033, 2932, 3058, 3309, 4010, 4308
SfcI CTRYAG 4 cut(s) 993, 1408, 1899, 3748
SgrAI CRCCGGYG 1 cut(s) 446
SinI GGWCC 7 cut(s) 605, 1070, 1271, 3224, 3939, 4107, 4238
SmiMI CAYNNNNRTG 6 cut(s) 308, 1421, 2029, 3041, 3317, 3511
SmlI CTYRAG 1 cut(s) 921
SmoI CTYRAG 1 cut(s) 921
SpeI ACTAGT 2 cut(s) 2077, 4255
SseBI AGGCCT 2 cut(s) 911, 3173
SspI AATATT 1 cut(s) 2269
StuI AGGCCT 2 cut(s) 911, 3173
StyD4I CCNGG 8 cut(s) 617, 1266, 2629, 2959, 3274, 3306, 3798, 4177
StyI CCWWGG 4 cut(s) 1841, 2383, 3442, 4165
TaqI TCGA 8 cut(s) 168, 306, 372, 657, 1227, 1893, 2113, 3876
TatI WGTACW 5 cut(s) 3258, 3712, 3771, 4197, 4252
TauI GCSGC 3 cut(s) 49, 1655, 3344
TscAI CASTG 9 cut(s) 952, 1428, 1737, 3117, 3527, 3735, 3747, 4192, 4273
TseFI GTSAC 8 cut(s) 268, 1045, 1915, 2611, 2818, 2965, 3802, 4139
Tsp45I GTSAC 8 cut(s) 268, 1045, 1915, 2611, 2818, 2965, 3802, 4139
TspGWI ACGGA 3 cut(s) 358, 600, 2996
TspRI CASTG 9 cut(s) 952, 1428, 1737, 3117, 3527, 3735, 3747, 4192, 4273
Tth111I GACNNNGTC 2 cut(s) 230, 311
Van91I CCANNNNNTGG 1 cut(s) 1996
VneI GTGCAC 2 cut(s) 3136, 4173
VpaK11BI GGWCC 7 cut(s) 605, 1070, 1271, 3224, 3939, 4107, 4238
XagI CCTNNNNNAGG 4 cut(s) 216, 2387, 2864, 3441
XapI RAATTY 3 cut(s) 963, 1451, 4059
XbaI TCTAGA 4 cut(s) 113, 1288, 2374, 4322
XceI RCATGY 4 cut(s) 1759, 2034, 2554, 3212
XcmI CCANNNNNNNNNTGG 3 cut(s) 634, 2488, 3319
XmiI GTMKAC 2 cut(s) 234, 1898
ZraI GACGTC 3 cut(s) 232, 268, 673
ZrmI AGTACT 2 cut(s) 3260, 4254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.