Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0002725

Physical Location & Seq

Genomic Coordinates Forward (+)

55487890 .. 55498396

Gene Structure 10507 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G033870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4416 bp

ATGGAGGGAACAGAGAGAGTAAAAGCAGGTACAAATCGAAGAAGCAGAAGCAGAACTCCGAGTTGGAGCATGGAGGAAGTGTTTGTGAGTGCCACGCACTCTCGAAGAAGCAGTAGAGCTGAAGACGAAGAGGCTCTGACTTGGGCTGCCATTGAGAAACTGCCAACATATGATAGACTAAGAACAGGGATCATCCAGTCCATTGTGGAGAGCGAGAATCCTCGAAGGAAAAACAACAAAGTGATGCACAAGGAAGTTGATGTTCTGAAGCTTGATGTAACCGACCGTCAAGATTTCATTGACAGGATTTTCAAGGATGCAGAGGAAGATAATGAGAAGTTCTTGAAGAAGTTCAGAAGCAGAATTGATAAGGTTGGGATTAGACTTCCCACAGTGGAAGTTAGGTTTGATCATTTGACGGTCGAAGCAGAATGCCATATTGGTAACAGAGCTCTTCCCACTCTCCCAAATGTTGCTAGGAACATTGCAGAATCAGCTCTTGGTTTGATTGGGATTACAACGGCTAAGAGAACAAATCTAACAATCCTCAAGAATGCCACTGGCATTATCAAACCATCGAGGATGGCTCTATTATTAGGTCCCCCGTCGTCAGGGAAAACAACCCTTCTGTTGGCACTAGCTGGGAAGTTGGATCCTAGCTTGAAGGTTAAAGGAGAGATCACATACAATGGGTATAGGTTGAACGAATTTGTACCACAGAAGACATCTGCATATATTAGCCAAAATGATGTTCATTTAGGAGAGATGACTGTCAAAGAAACCCTAGATTTTTCGGCAAGGTGCCAAGGGGTTGGTACTCGATATGAACTTCTGTCTGAGCTAGCTAGAAGGGAAAAGGAAGCAAGAATATTTCCCGAGGCAGAACTTGACCTTTTCATGAAGGCTACTGCAATGGGAGGAGTTGAGAGCAGTCTCATTACCGACTACACTCTCAAAATTTTGGGGCTTGATATATGCAAGGATACCATTGTTGGAAACGAAATGCAGAGAGGGATTTCTGGTGGCCAAAAGAAACGAGTAACGACAGGTGAGATGATTGTGGGGCCTACAAAAGCACTATTCATGGACGAAATATCAACCGGTCTAGATAGCTCCACCACATTTCAAATAGTGAAGTGCTTGCAGCAAATCGTGCACATCACTGAAGCTACGATCTTCATGTCGCTACTCCAACCTGGTCAAATTGTCTACCAGGGACCGCGTGAGAACATAGTAGGGTTCTTTGAGAGCTGCGGATTTCGATGCCCCGAGCGAAAGGGAACTGCTGATTTCTTGCAAGAGAAAAACCAAGAGCAATATTGGGCAGATAGAAGCAAGCCATACAGATACATATCAGTGACTGAATTCTCAAACCGATTTAAACGCTTCCATGTTGGCATGAGGCTTGAAAACGAGCTCTCAATCCCTTTTGATAAGTCACGAGGCCACAAAGCAGCTCTAGTATTCACAAGATATTCAGTATCCAAAATGGAACTTCTAAAGGCCTGTTGGGACAAGGAATGGCTACTCATAAAGAGGAACTCTTTTGTCTACATTTTTAAGACCGTCCAAATAATTATAGGGGCGTTGATAACCTCGACTGTGTTTTTGAAGACCCAAATGCACACCAGAAATGAAGATGATGGAGCAGTATATCTTGGTGCACTATTATTTACCATGATCATTAACACGTTCAATGGTTTTGCTGAGCTCTCGATGACCATTGCAAGACTACCTGTATTTTACAAGCATAGAGACCTTCTTTTCCACCCTGCTTGGACTTTCACTCTCCCAACTATCCTGCTCACTATTCCTATATCCATTGTTGAATCCACAGTTTGGATGGTCATAACATATTACACCATTGGTTTTGCACCTGAAGCTAGCAGGTTTTTCAAGCAACTATTGCTGATATTTCTGATCCAACAAATGGCTGCTGGGATCTTCAGGCTTATTGCTGGAGTCTGCAGGACCATGATCATAGCAAACACTGGTGGGGCTCTCACTTTGCTCATGGTTTTCATGCTTGGAGGTTTCATACTACCTAAAGGCGAAATTCCAAAGTGGTGGCAGTGGGGTTACTGGGTTTCACCTATGACCTATGGTTTCAATGCTATTGCTGTAAATGAAATGTTTTCTCCCAGGTGGATGAACAAATGGGCTTCAGATAATGATACCAGATTGGGTGTGGCAGTGCTTCAAAACTTCGAAGTTTTCCCTGACAAAAACTGGTTTTGGATTGGCTCTGCAGCTCTTCTGGGGTTTGCAATTCTCTTCAACATCCTCTACACTATAGCTCTCATGTACCTCAGTCCTCCTGGAAAAGCACAAGCTATTATATCTGAAGAATTGGCCGAAGAGATGGAGGGAGACCAAGAAGAATCCAGGGAAGAACCAAGACTTAGAAGGCCCAAGTCAAAGCAAGATTCATTTTCTCAGTCATTATCATCTGCTGATGCAAACAATTCAAGAGAAATGGCAATCCGGCGTATGAGCAGTCAATCCAATACCAGTGGACTAAGTAGGAATGCTGATTCTTCCCTAGAAGTAGCCAGTGGGGTTGCGCCCAAGAGAGGAATGGTTCTTCCTTTCACTCCTCTGGCAATGTCCTTTGATGATGTTAATTACTATGTGGACATGCCTCCTGAAATGAAAGAAGAAGGAGTGAGTGAGGACAGGCTGCAGCTACTTCGTGAAGTAACCGGTGCTTTTAGGCCTGGGGTCTTGACTGCTCTAATGGGGATCAGCGGGGCTGGAAAGACAACTTTGATGGATGTCTTAGCAGGAAGAAAGACTGGTGGTTACATTGAAGGCGATATTAGAATTTCCGGTTTCCCTAAGAAACAAGAAACCTTTGCAAGAATTTCTGGTTATTGTGAACAAACTGATATCCACTCACCCCAAGTCACTGTCAAAGAGTCGCTAATTTACTCAGCTTTCCTTAGGCTCCCTAAAGAAGTCAGCAAACAGGACAAGATGATTTTCGTCCAAGAGGTGATGGAATTGGTCGAGCTAGACAGTCTCAAGGATGCTCTGGTCGGGCTTCCTGGAATTACAGGGTTGTCAACCGAACAAAGAAAGAGGTTAACAATTGCAGTTGAGCTTGTTGCTAATCCCTCAATCATTTTCATGGATGAACCAACATCAGGTCTTGATGCAAGGGCAGCTGCAATTGTTATGAGGACTGTTAGAAATACGGTGGACACTGGGAGAACAGTTGTCTGCACTATTCACCAGCCTAGCATTGATATATTCGAGGCATTTGATGAGCTTCTACTCCTGAAGAGAGGAGGACAAGTTATCTACTCGGGACCATTAGGCCGCAATTCCCACAAGATCATCGAATATTTTGAGGCTATTCCTGGAGTGCAAAAAATAAAAGAAAAGTATAATCCAGCCACATGGATGCTTGAGGTAAGCTCAGTAGGAACTGAGGTCAAGCTTGGAATGGACTTTGCTCAATACTACAGATCATCTTCCTTGCACCAGAGAAACAAAGCCTTAGTAAAGGAGCTAAGCAAACCATCTCCAGGAGCAAAAGATCTCTATTTTGCTACTCAGTATTCACAGTCATCATTACAACAATTCAAATCATGTCTGTGGAAGCAGTGGTGGACTTATTGGAGAACTCCTGATTATAACCTTGTTAGATTCTTTTTCACCTTGGCTTGTGCTCTCATGCTTGGAACTATGTTCTGGAAGGTTGGCACTAAAAGGGAAAGCACTTCTGATCTGACCATGATTATTGGGGCTATGTATTCTGCTGTGCTGTTCGTTGGAATTAACAACTGCTCCACAGTGCAGCCAATAATCGCCACTGAAAGAACGGTATTCTATCGAGAAAGAGCTGCTGGGATGTACTCTGCATTACCTTATGCACTAGCACAGGTTATTATTGAAATGCCATATGTGTTTCTTCAGACCACATATTATACGCTGATAGTGTATGCCATGGTGAGCTTTCAATGGACAGCAGCAAAATTCTTCTGGTTCTTCTTTGTCAACTTCTTCTCATTCCTTTACTTCACATACTACGGAATGATGACTGTTTCCATTACTCCAAACCACCAAGTAGCATCCATATTCGCTGCAGCTTTCTATTCACTTTTCAACCTCTTTTCCGGTTTCTTCATACCAAGACCAAAAATACCGAAATGGTGGGTTTGGTATTACTGGATATGCCCAGTAGCATGGACAGTGTATGGATTGATTGTATCACAATATGGTGATATTTTGGACACCATTAAAGCACCTGGGATGACACCTGATCCGACTGTGAAATGGTATGTAGAACACCATTTTGGATACGATCCAAACTTCATGGGACCAGTGGCTGGAGTTCTGGTTGGCTTCACACTCTTCTTTGCTTTCATGTATGCTTACTGCATAAAAACTCTCAACTTCCAAATCAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1471

Amino Acids

166.79

Weight (kDa)

8.88

Isoelectric Point (pI)

40.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_trans_N	PF14510	107 - 158	3.3e-09	ABC-transporter N-terminal
ABC_tran	PF00005	183 - 364	6.1e-14	ABC transporter
ABC2_membrane	PF01061	499 - 710	4.1e-54	ABC-2 type transporter
PDR_assoc	PF08370	716 - 780	1.7e-26	Plant PDR ABC transporter associated
ABC_tran	PF00005	898 - 1049	3.1e-19	ABC transporter
ABC2_membrane_7	PF19055	1078 - 1139	4.8e-06	ABC-2 type transporter
ABC2_membrane	PF01061	1194 - 1408	7.4e-63	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15210 AT1G59870 AT3G16340 AT3G16340
fragaria_vesca	FvH4_6g32310 FvH4_6g32310
malus_domestica	MD09G1203500.v1.1 MD09G1204000.v1.1 MD09G1204200.v1.1 MD09G1204300.v1.1 MD17G1184700.v1.1
prunus_persica	Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059900_v2.0.a1 Prupe.3G060000_v2.0.a1 Prupe.3G060000_v2.0.a1
pyrus_communis	pycom09g12060 pycom09g12080 pycom09g12130 pycom17g19420
rosa_chinensis	RchiOBHm_Chr2g0140401
rosa_laevigata	RLG00000019862
rosa_multiflora	Rmu_sc0008211.1_g000001 Rmu_sc0010411.1_g000005 Rmu_sc0019541.1_g000001 Rmu_sc0019542.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104910
rosa_rugosa	Rorug02G0361800 Rorug02G0361900 Rorug02G0362000 Rorug02G0362100 Rorug02G0362100
rosa_samantha	Rh2AG413100 Rh2BG423600 Rh2CG399300 Rh2DG432500
rosa_wichuraiana	Rw2G033870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3639
Acc36I	ACCTGC	2 cut(s)	17, 1878
AccB1I	GGYRCC	1 cut(s)	801
AccB7I	CCANNNNNTGG	3 cut(s)	1839, 1930, 4334
AccI	GTMKAC	2 cut(s)	1209, 1551
AccII	CGCG	1 cut(s)	1222
AciI	CCGC	4 cut(s)	1220, 1254, 2748, 3322
AclWI	GGATC	8 cut(s)	197, 647, 660, 1915, 1949, 2750, 4262, 4304
AcoI	YGGCCR	2 cut(s)	1024, 2352
AcsI	RAATTY	7 cut(s)	707, 957, 1364, 2055, 2823, 2862, 3980
AcuI	CTGAAG	9 cut(s)	141, 287, 1185, 1899, 1930, 2148, 2364, 3302, 3902
AfaI	GTAC	5 cut(s)	31, 714, 817, 2306, 3860
AfiI	CCNNNNNNNGG	8 cut(s)	611, 631, 1839, 1930, 2573, 3146, 3530, 4334
AflIII	ACRYGT	1 cut(s)	1689
AgeI	ACCGGT	2 cut(s)	1100, 2702
Alw21I	GWGCWC	6 cut(s)	454, 1158, 1419, 1666, 1713, 3676
Alw26I	GTCTC	4 cut(s)	938, 1749, 2364, 3026
Alw44I	GTGCAC	2 cut(s)	1154, 1662
AlwI	GGATC	8 cut(s)	197, 647, 660, 1915, 1949, 2750, 4262, 4304
AlwNI	CAGNNNCTG	2 cut(s)	1361, 4334
Ama87I	CYCGRG	3 cut(s)	875, 1268, 3307
AoxI	GGCC	8 cut(s)	1024, 1064, 1444, 1503, 2352, 2408, 2714, 3319
ApaLI	GTGCAC	2 cut(s)	1154, 1662
ApoI	RAATTY	7 cut(s)	707, 957, 1364, 2055, 2823, 2862, 3980
ArsI	GACNNNNNNTTYG	2 cut(s)	1591, 1623
AsiGI	ACCGGT	2 cut(s)	1100, 2702
Asp700I	GAANNNNTTC	1 cut(s)	350
AspLEI	GCGC	1 cut(s)	2566
AspS9I	GGNCC	7 cut(s)	599, 1064, 1217, 1971, 2409, 3311, 4325
AsuHPI	GGTGA	8 cut(s)	1061, 2082, 2889, 3007, 3224, 3652, 3967, 4238
AsuII	TTCGAA	1 cut(s)	2208
AsuNHI	GCTAGC	2 cut(s)	841, 1883
AvaI	CYCGRG	3 cut(s)	875, 1268, 3307
AvaII	GGWCC	5 cut(s)	599, 1217, 1971, 3311, 4325
AxyI	CCTNAGG	1 cut(s)	2942
BaeGI	GKGCMC	2 cut(s)	1158, 1666
BaeI	ACNNNNGTAYC	2 cut(s)	975, 1008
BalI	TGGCCA	1 cut(s)	1026
BamHI	GGATCC	1 cut(s)	652
BanI	GGYRCC	1 cut(s)	801
BanII	GRGCYC	4 cut(s)	454, 1419, 1713, 2002
BauI	CACGAG	1 cut(s)	1440
BbsI	GAAGAC	3 cut(s)	129, 728, 1619
Bbv12I	GWGCWC	6 cut(s)	454, 1158, 1419, 1666, 1713, 3676
BccI	CCATC	8 cut(s)	577, 583, 1637, 1837, 2356, 2764, 2992, 3532
BceAI	ACGGC	1 cut(s)	537
BcgI	CGANNNNNNTGC	2 cut(s)	2672, 2706
BciVI	GTATCC	3 cut(s)	976, 1492, 4298
BclI	TGATCA	3 cut(s)	409, 1680, 1977
BcoDI	GTCTC	4 cut(s)	938, 1749, 2364, 3026
BfmI	CTRYAG	6 cut(s)	1966, 2247, 2292, 2681, 3466, 4089
BfuAI	ACCTGC	2 cut(s)	17, 1878
BfuI	GTATCC	3 cut(s)	976, 1492, 4298
BglII	AGATCT	1 cut(s)	3541
BlpI	GCTNAGC	2 cut(s)	1707, 3515
Bme18I	GGWCC	5 cut(s)	599, 1217, 1971, 3311, 4325
BmeT110I	CYCGRG	3 cut(s)	875, 1268, 3307
BmgT120I	GGNCC	7 cut(s)	599, 1064, 1217, 1971, 2409, 3311, 4325
BmiI	GGNNCC	8 cut(s)	601, 654, 803, 1065, 1218, 2948, 3312, 4326
BmrI	ACTGGG	3 cut(s)	2092, 3216, 4178
BmsI	GCATC	8 cut(s)	234, 307, 1253, 2446, 3019, 3145, 3396, 4085
BmtI	GCTAGC	2 cut(s)	845, 1887
BmuI	ACTGGG	3 cut(s)	2092, 3216, 4178
BpiI	GAAGAC	3 cut(s)	129, 728, 1619
BplI	GAGNNNNNCTC	4 cut(s)	571, 603, 3404, 3436
BpmI	CTGGAG	4 cut(s)	1980, 3384, 3513, 4356
Bpu1102I	GCTNAGC	2 cut(s)	1707, 3515
Bpu14I	TTCGAA	1 cut(s)	2208
BpuEI	CTTGAG	3 cut(s)	533, 3008, 3431
BsaBI	GATNNNNATC	1 cut(s)	1351
BsaI	GGTCTC	2 cut(s)	1749, 2364
BsaJI	CCNNGG	9 cut(s)	805, 876, 1213, 2141, 2385, 2717, 3663, 3951, 4253
BsaWI	WCCGGW	4 cut(s)	1100, 2702, 2828, 4121
BsaXI	ACNNNNNCTCC	8 cut(s)	65, 95, 3282, 3312, 3776, 3806, 4329, 4359
Bsc4I	CCNNNNNNNGG	8 cut(s)	611, 631, 1839, 1930, 2573, 3146, 3530, 4334
Bse118I	RCCGGY	2 cut(s)	1100, 2702
Bse21I	CCTNAGG	1 cut(s)	2942
Bse3DI	GCAATG	4 cut(s)	483, 918, 1722, 2610
Bse8I	GATNNNNATC	1 cut(s)	1351
BseDI	CCNNGG	9 cut(s)	805, 876, 1213, 2141, 2385, 2717, 3663, 3951, 4253
BseJI	GATNNNNATC	1 cut(s)	1351
BseLI	CCNNNNNNNGG	8 cut(s)	611, 631, 1839, 1930, 2573, 3146, 3530, 4334
BseMI	GCAATG	4 cut(s)	483, 918, 1722, 2610
BseMII	CTCAG	8 cut(s)	828, 1698, 2323, 2450, 2946, 3423, 3435, 3572
BseRI	GAGGAG	3 cut(s)	933, 2586, 3303
BseSI	GKGCMC	2 cut(s)	1158, 1666
BseYI	CCCAGC	3 cut(s)	641, 1937, 3851
BsgI	GTGCAG	2 cut(s)	3208, 3821
Bsh1236I	CGCG	1 cut(s)	1222
Bsh1285I	CGRYCG	2 cut(s)	286, 423
BshFI	GGCC	8 cut(s)	1026, 1066, 1446, 1505, 2354, 2410, 2716, 3321
BshNI	GGYRCC	1 cut(s)	801
BshTI	ACCGGT	2 cut(s)	1100, 2702
BsiEI	CGRYCG	2 cut(s)	286, 423
BsiHKAI	GWGCWC	6 cut(s)	454, 1158, 1419, 1666, 1713, 3676
BsiHKCI	CYCGRG	3 cut(s)	875, 1268, 3307
BsiSI	CCGG	5 cut(s)	1101, 2485, 2703, 2829, 4122
BslFI	GGGAC	5 cut(s)	585, 1230, 1526, 3324, 4338
BslI	CCNNNNNNNGG	8 cut(s)	611, 631, 1839, 1930, 2573, 3146, 3530, 4334
BsmAI	GTCTC	4 cut(s)	938, 1749, 2364, 3026
BsmFI	GGGAC	5 cut(s)	585, 1230, 1526, 3324, 4338
BsmI	GAATGC	3 cut(s)	437, 559, 2533
BsnI	GGCC	8 cut(s)	1026, 1066, 1446, 1505, 2354, 2410, 2716, 3321
Bso31I	GGTCTC	2 cut(s)	1749, 2364
BsoBI	CYCGRG	3 cut(s)	875, 1268, 3307
Bsp119I	TTCGAA	1 cut(s)	2208
Bsp1286I	GDGCHC	7 cut(s)	454, 1158, 1419, 1666, 1713, 2002, 3676
Bsp1720I	GCTNAGC	2 cut(s)	1707, 3515
Bsp19I	CCATGG	1 cut(s)	3951
BspACI	CCGC	4 cut(s)	1220, 1254, 2748, 3322
BspANI	GGCC	8 cut(s)	1026, 1066, 1446, 1505, 2354, 2410, 2716, 3321
BspCNI	CTCAG	8 cut(s)	829, 1699, 2322, 2449, 2945, 3424, 3434, 3571
BspFNI	CGCG	1 cut(s)	1222
BspHI	TCATGA	1 cut(s)	897
BspLI	GGNNCC	8 cut(s)	601, 654, 803, 1065, 1218, 2948, 3312, 4326
BspMAI	CTGCAG	4 cut(s)	1970, 2251, 2685, 4093
BspMI	ACCTGC	2 cut(s)	17, 1878
BspOI	GCTAGC	2 cut(s)	845, 1887
BspPI	GGATC	8 cut(s)	197, 647, 660, 1915, 1949, 2750, 4262, 4304
BspQI	GCTCTTC	2 cut(s)	459, 2259
BspT104I	TTCGAA	1 cut(s)	2208
BspT107I	GGYRCC	1 cut(s)	801
BspTNI	GGTCTC	2 cut(s)	1749, 2364
BsrDI	GCAATG	4 cut(s)	483, 918, 1722, 2610
BsrFI	RCCGGY	2 cut(s)	1100, 2702
BssAI	RCCGGY	2 cut(s)	1100, 2702
BssECI	CCNNGG	9 cut(s)	805, 876, 1213, 2141, 2385, 2717, 3663, 3951, 4253
BssSI	CACGAG	1 cut(s)	1440
BssT1I	CCWWGG	3 cut(s)	805, 3663, 3951
Bst2BI	CACGAG	1 cut(s)	1440
Bst6I	CTCTTC	7 cut(s)	123, 459, 2259, 2279, 2352, 3278, 4364
BstAPI	GCANNNNNTGC	2 cut(s)	1153, 1906
BstBI	TTCGAA	1 cut(s)	2208
BstC8I	GCNNGC	4 cut(s)	843, 1142, 1337, 1885
BstDSI	CCRYGG	1 cut(s)	3951
BstFNI	CGCG	1 cut(s)	1222
BstHHI	GCGC	1 cut(s)	2566
BstMAI	GTCTC	4 cut(s)	938, 1749, 2364, 3026
BstMCI	CGRYCG	2 cut(s)	286, 423
BstMWI	GCNNNNNNNGC	5 cut(s)	494, 1153, 1880, 1906, 3164
BstNSI	RCATGY	1 cut(s)	2641
BstSFI	CTRYAG	6 cut(s)	1966, 2247, 2292, 2681, 3466, 4089
BstSLI	GKGCMC	2 cut(s)	1158, 1666
BstUI	CGCG	1 cut(s)	1222
BstV2I	GAAGAC	3 cut(s)	129, 728, 1619
BstX2I	RGATCY	3 cut(s)	652, 1941, 3541
BstXI	CCANNNNNNTGG	4 cut(s)	812, 2067, 3402, 4191
BstYI	RGATCY	3 cut(s)	652, 1941, 3541
Bsu36I	CCTNAGG	1 cut(s)	2942
BsuI	GTATCC	3 cut(s)	976, 1492, 4298
BsuRI	GGCC	8 cut(s)	1026, 1066, 1446, 1505, 2354, 2410, 2716, 3321
BtgI	CCRYGG	1 cut(s)	3951
BtsI	GCAGTG	3 cut(s)	2078, 2199, 3614
BveI	ACCTGC	2 cut(s)	17, 1878
Cac8I	GCNNGC	4 cut(s)	843, 1142, 1337, 1885
CaiI	CAGNNNCTG	2 cut(s)	1361, 4334
CciI	TCATGA	1 cut(s)	897
CfoI	GCGC	1 cut(s)	2566
Cfr10I	RCCGGY	2 cut(s)	1100, 2702
Cfr13I	GGNCC	7 cut(s)	599, 1064, 1217, 1971, 2409, 3311, 4325
CsiI	ACCWGGT	1 cut(s)	1195
Csp6I	GTAC	5 cut(s)	30, 713, 816, 2305, 3859
CspAI	ACCGGT	2 cut(s)	1100, 2702
CspCI	CAANNNNNGTGG	4 cut(s)	1757, 1792, 2494, 2529
CviQI	GTAC	5 cut(s)	30, 713, 816, 2305, 3859
DraI	TTTAAA	1 cut(s)	1381
EaeI	YGGCCR	2 cut(s)	1024, 2352
Eam1104I	CTCTTC	7 cut(s)	123, 459, 2259, 2279, 2352, 3278, 4364
EarI	CTCTTC	7 cut(s)	123, 459, 2259, 2279, 2352, 3278, 4364
Ecl136II	GAGCTC	3 cut(s)	452, 1417, 1711
Eco130I	CCWWGG	3 cut(s)	805, 3663, 3951
Eco147I	AGGCCT	2 cut(s)	1505, 2716
Eco24I	GRGCYC	4 cut(s)	454, 1419, 1713, 2002
Eco31I	GGTCTC	2 cut(s)	1749, 2364
Eco32I	GATATC	1 cut(s)	2890
Eco47I	GGWCC	5 cut(s)	599, 1217, 1971, 3311, 4325
Eco53kI	GAGCTC	3 cut(s)	452, 1417, 1711
Eco57I	CTGAAG	9 cut(s)	141, 287, 1185, 1899, 1930, 2148, 2364, 3302, 3902
Eco81I	CCTNAGG	1 cut(s)	2942
Eco88I	CYCGRG	3 cut(s)	875, 1268, 3307
EcoICRI	GAGCTC	3 cut(s)	452, 1417, 1711
EcoO109I	RGGNCCY	2 cut(s)	599, 1064
EcoRI	GAATTC	1 cut(s)	1364
EcoRV	GATATC	1 cut(s)	2890
EcoT14I	CCWWGG	3 cut(s)	805, 3663, 3951
EcoT38I	GRGCYC	4 cut(s)	454, 1419, 1713, 2002
ErhI	CCWWGG	3 cut(s)	805, 3663, 3951
FaqI	GGGAC	5 cut(s)	585, 1230, 1526, 3324, 4338
FauI	CCCGC	1 cut(s)	2741
FauNDI	CATATG	2 cut(s)	169, 3907
FbaI	TGATCA	3 cut(s)	409, 1680, 1977
FblI	GTMKAC	2 cut(s)	1209, 1551
FriOI	GRGCYC	4 cut(s)	454, 1419, 1713, 2002
GlaI	GCGC	1 cut(s)	2565
GsaI	CCCAGC	3 cut(s)	645, 1941, 3855
GsuI	CTGGAG	4 cut(s)	1980, 3384, 3513, 4356
HaeIII	GGCC	8 cut(s)	1026, 1066, 1446, 1505, 2354, 2410, 2716, 3321
HapII	CCGG	5 cut(s)	1101, 2485, 2703, 2829, 4122
HhaI	GCGC	1 cut(s)	2566
Hin6I	GCGC	1 cut(s)	2564
HinP1I	GCGC	1 cut(s)	2564
HincII	GTYRAC	3 cut(s)	3066, 3087, 4003
HindII	GTYRAC	3 cut(s)	3066, 3087, 4003
HindIII	AAGCTT	2 cut(s)	269, 3440
HinfI	GANTC	9 cut(s)	217, 491, 1829, 1962, 2381, 2426, 2534, 2918, 3651
HpaI	GTTAAC	1 cut(s)	3087
HpaII	CCGG	5 cut(s)	1101, 2485, 2703, 2829, 4122
HphI	GGTGA	8 cut(s)	1061, 2082, 2889, 3007, 3224, 3652, 3967, 4238
Hpy99I	CGWCG	1 cut(s)	610
HpyCH4IV	ACGT	1 cut(s)	1691
HpyF10VI	GCNNNNNNNGC	5 cut(s)	494, 1153, 1880, 1906, 3164
HpySE526I	ACGT	1 cut(s)	1691
HspAI	GCGC	1 cut(s)	2564
Ksp22I	TGATCA	3 cut(s)	409, 1680, 1977
KspAI	GTTAAC	1 cut(s)	3087
LguI	GCTCTTC	2 cut(s)	459, 2259
LmnI	GCTCC	7 cut(s)	66, 1118, 1646, 2952, 3511, 3533, 3797
LweI	GCATC	8 cut(s)	234, 307, 1253, 2446, 3019, 3145, 3396, 4085
MabI	ACCWGGT	1 cut(s)	1195
MaeII	ACGT	1 cut(s)	1691
MaeIII	GTNAC	9 cut(s)	277, 443, 1039, 1357, 1437, 2078, 2698, 2801, 2905
MfeI	CAATTG	2 cut(s)	3090, 3171
MflI	RGATCY	3 cut(s)	652, 1941, 3541
MhlI	GDGCHC	7 cut(s)	454, 1158, 1419, 1666, 1713, 2002, 3676
MlsI	TGGCCA	1 cut(s)	1026
MluNI	TGGCCA	1 cut(s)	1026
MlyI	GAGTC	2 cut(s)	1971, 2927
MmeI	TCCRAC	7 cut(s)	44, 630, 973, 1216, 1948, 3757, 4295
Mox20I	TGGCCA	1 cut(s)	1026
MroXI	GAANNNNTTC	1 cut(s)	350
MscI	TGGCCA	1 cut(s)	1026
MseI	TTAA	8 cut(s)	669, 1380, 1560, 1686, 2622, 3086, 3783, 4245
MslI	CAYNNNNRTG	4 cut(s)	1355, 3128, 3404, 3598
Msp20I	TGGCCA	1 cut(s)	1026
MspA1I	CMGCKG	2 cut(s)	2748, 3167
MspI	CCGG	5 cut(s)	1101, 2485, 2703, 2829, 4122
MunI	CAATTG	2 cut(s)	3090, 3171
Mva1269I	GAATGC	3 cut(s)	437, 559, 2533
MvnI	CGCG	1 cut(s)	1222
MwoI	GCNNNNNNNGC	5 cut(s)	494, 1153, 1880, 1906, 3164
NcoI	CCATGG	1 cut(s)	3951
NdeI	CATATG	2 cut(s)	169, 3907
NheI	GCTAGC	2 cut(s)	841, 1883
NlaIV	GGNNCC	8 cut(s)	601, 654, 803, 1065, 1218, 2948, 3312, 4326
NmuCI	GTSAC	3 cut(s)	1357, 1437, 2905
NspI	RCATGY	1 cut(s)	2641
NspV	TTCGAA	1 cut(s)	2208
PagI	TCATGA	1 cut(s)	897
PceI	AGGCCT	2 cut(s)	1505, 2716
PciSI	GCTCTTC	2 cut(s)	459, 2259
PctI	GAATGC	3 cut(s)	437, 559, 2533
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	7 cut(s)	217, 491, 1829, 2381, 2426, 2534, 3651
PflMI	CCANNNNNTGG	3 cut(s)	1839, 1930, 4334
PfoI	TCCNGGA	4 cut(s)	2317, 3046, 3361, 3529
PinAI	ACCGGT	2 cut(s)	1100, 2702
PleI	GAGTC	2 cut(s)	1970, 2926
PpsI	GAGTC	2 cut(s)	1970, 2926
PpuMI	RGGWCCY	1 cut(s)	599
PsiI	TTATAA	1 cut(s)	3639
Psp124BI	GAGCTC	3 cut(s)	454, 1419, 1713
Psp5II	RGGWCCY	1 cut(s)	599
PspFI	CCCAGC	3 cut(s)	641, 1937, 3851
PspN4I	GGNNCC	8 cut(s)	601, 654, 803, 1065, 1218, 2948, 3312, 4326
PspPI	GGNCC	7 cut(s)	599, 1064, 1217, 1971, 2409, 3311, 4325
PspPPI	RGGWCCY	1 cut(s)	599
PstI	CTGCAG	4 cut(s)	1970, 2251, 2685, 4093
PstNI	CAGNNNCTG	2 cut(s)	1361, 4334
PsuI	RGATCY	3 cut(s)	652, 1941, 3541
PvuII	CAGCTG	1 cut(s)	3167
RsaI	GTAC	5 cut(s)	31, 714, 817, 2306, 3860
RsaNI	GTAC	5 cut(s)	30, 713, 816, 2305, 3859
RseI	CAYNNNNRTG	4 cut(s)	1355, 3128, 3404, 3598
SacI	GAGCTC	3 cut(s)	454, 1419, 1713
SapI	GCTCTTC	2 cut(s)	459, 2259
SaqAI	TTAA	8 cut(s)	669, 1380, 1560, 1686, 2622, 3086, 3783, 4245
Sau96I	GGNCC	7 cut(s)	599, 1064, 1217, 1971, 2409, 3311, 4325
SchI	GAGTC	2 cut(s)	1971, 2927
SduI	GDGCHC	7 cut(s)	454, 1158, 1419, 1666, 1713, 2002, 3676
SexAI	ACCWGGT	1 cut(s)	1195
SfaNI	GCATC	8 cut(s)	234, 307, 1253, 2446, 3019, 3145, 3396, 4085
SfcI	CTRYAG	6 cut(s)	1966, 2247, 2292, 2681, 3466, 4089
SfuI	TTCGAA	1 cut(s)	2208
SinI	GGWCC	5 cut(s)	599, 1217, 1971, 3311, 4325
SmiMI	CAYNNNNRTG	4 cut(s)	1355, 3128, 3404, 3598
SmlI	CTYRAG	3 cut(s)	548, 3023, 3410
SmoI	CTYRAG	3 cut(s)	548, 3023, 3410
SseBI	AGGCCT	2 cut(s)	1505, 2716
SsiI	CCGC	4 cut(s)	1220, 1254, 2748, 3322
SspI	AATATT	3 cut(s)	870, 1319, 3347
SstI	GAGCTC	3 cut(s)	454, 1419, 1713
StuI	AGGCCT	2 cut(s)	1505, 2716
StyI	CCWWGG	3 cut(s)	805, 3663, 3951
TaiI	ACGT	1 cut(s)	1694
TatI	WGTACW	1 cut(s)	3858
TauI	GCSGC	1 cut(s)	3324
TfiI	GAWTC	7 cut(s)	217, 491, 1829, 2381, 2426, 2534, 3651
Tru1I	TTAA	8 cut(s)	669, 1380, 1560, 1686, 2622, 3086, 3783, 4245
Tru9I	TTAA	8 cut(s)	669, 1380, 1560, 1686, 2622, 3086, 3783, 4245
TseFI	GTSAC	3 cut(s)	1357, 1437, 2905
Tsp45I	GTSAC	3 cut(s)	1357, 1437, 2905
TspGWI	ACGGA	1 cut(s)	4050
Van91I	CCANNNNNTGG	3 cut(s)	1839, 1930, 4334
VneI	GTGCAC	2 cut(s)	1154, 1662
VpaK11BI	GGWCC	5 cut(s)	599, 1217, 1971, 3311, 4325
XapI	RAATTY	7 cut(s)	707, 957, 1364, 2055, 2823, 2862, 3980
XbaI	TCTAGA	1 cut(s)	1105
XceI	RCATGY	1 cut(s)	2641
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1840, 2185, 2575
XmiI	GTMKAC	2 cut(s)	1209, 1551
XmnI	GAANNNNTTC	1 cut(s)	350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.