Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0002725

Physical Location & Seq

Genomic Coordinates Reverse (-)

10455248 .. 10461567

Gene Structure 6320 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g12080.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3096 bp

ATGAGTTTGTGCCACGGAAGACATCTGCATACATTAGCCAAAATGATCTATCATGTTGGAAATATGACGGTCAAAGAAACACTAGATTTTTCAGCAAGGTGCCAAGGGGTTGGGACACGATATGAACTTCTTACTGAGCTTGCTAGAAGAGAAAAGGCCGCTGGAATATATCCAGAGCCCGAAGTAGACCTTTTCATGAAGGCTACTGCAATGGGAGGACTTGAAAACAGTCTCATTACTGATTATACTCTCAAAATTTTGGGGCTTGATATATGTAAGGACACAATTGTTGGAGATGAGATGCAGAGAGGGATATCTGGTGGCCAGAAAAAACGAGTAACCACAGGTGAGATGATTGTTGGACCTACTAAAACATTGTTCATGGATGAGATTTCAACGGGTCTCGATAGCTCCACGACGTTCCAAATCGTGAAGTGCCTACAACAAATTGTACACATCACTGAGGCTACGATCTTGATGTCTTTACTCCAACCTGCTCCTGAGACATTTGATCTTTTTGATGATATCATCCTTTTATCAGAAGGCCAGATCGTTTACCAGGGATCACGTGAGCACATATTAGAGTTCTTTGAGACATGTGGATTTCGATGCCCTGAGAGAAAGGGAACTGCCGATTTCTTGCAAGAGGTTACCTCAAGAAAAGACCAGGAGCAGTATTGGGCAGACAGAAGGACTCCATACAGATACGTATCGGTCACAGAATTTGCAAACCGGTTCAAGCGTTTCCATGTGGGCATGAGTATAGCGGATGAGCTCTCAATCCCATTCGACAAGGCTCAAAGCCACAAAGCAGCTCTTGTATTCAAAACATATTCAATGCCCAAAATGCAGCTTCTCAAAGCATGTTTTGACAAAGAATGGCTGCTCATGCAGAGGAACTCATTTATTTACATTTTCAAGACTGTCCAAATTATAATAGGGGCAATCATAACGGCGACAGTGTTTTTGAGGACCGAAATGGACACTAGAAATGAAAATGATGGAGCACTCTATGTTGGTGCACTTATATATTGCCTAATCATTAACATGTTTAATGGGTTTGCTGAGCTCTCATTGACCATTGCAAGACTTCCTGTGTTTTACAAGCATAGAGACCTTCTTTTCCACCCTGCTTGGACTTTCACTCTCCCATCTGTCCTGCTTGGGATTCCTATATCCATCATAGAATCTACTGTTTTCATAGGCATAACATACTACACCATTGGATTTGCACCTGAAGCTAGCAGGTTTTTCAAGCAACTATTGTTGATATTTCTGATGCAACAAATGGCATCTGCGCTATTTAGGCTTATTGCAGGAGTTAGCAGGACCATGATCATATCCAACACTGGCGGGACTCTCACTCTTCTAATTCTTTTCTTGCTTGGAGGTTTCATAATTCCAAGAGGTGAAATTCCAAACTGGTGGACGTGGGCATACTGGATTTCACCTTTGACATATGGCTTCAATGCTATCTCTGTAAATGAAATGTATGCTCCGAGGTGGATGAACAAACTGGCTTTAGATAATGTTACCAGGGTGGGTGAGACAGTGCTTAATAACTTTGATGTTTACCACAACAAAAACTGGTTTTGGATTGGTTCTGGCGCTCTTCTGGGGTTTATTGTTCTCTTCAACTCCCTTTATACGGTCTCCCTTATGTACCTAAGTCCTCCTGGAAAGCCACAAGCCATCATATCTGAAGAGGCGGCAAACGAAATGGGGCTAGACCAAGAAGAATCAAAGGAAGAGCCAAGACTGAGAAGACCCCCATCCAAGAATGTTTCATTGCCTCGATCATTATCTTCTACTGATGGAAACAATACAAGAGAAATGGAAGTCCGACGAATGAGCAGTCGATCCAGCTCTAGTGGACTAGATAGAAATGCTGATTCATCTCTCGAAGTCTCCGGTGGCGTTGCCCCCAAGAGAGGAATGGTTCTACCTTTCACTCCTCTTGCAATGTCCTTCGACAGTGTTAATTATTTCGTGGACATGCCCGCTGAAATGAAGGAGGAAGGAGTAGCAGAGGACAGGCTGCAACTACTTCGTGAAGTAACTGGTGCATTTAGGCCTGGGGTCTTGACTGCCCTAATGGGGGTAAGTGGGGCTGGGAAGACAACTTTGATGGATGTCTTAGCAGGAAGAAAGACCGGAGGTTACATTGAAGGTGACATTAGAATTTCCGGGTACCCTAAGAAGCAAGAAACCTTTGCAAGAATTTCTGGTTACTGTGAACAAACTGATATCCACTCACCCCAAGTCACTATCAAAGAATCGTTGGTTTACTCAGCTTTCCTTAGACTCCCTAAAGAAGTCAGCAACGAGGAAAAGATGATTTTTGTAGATCAAGTGATGGAACTGGTTGAGCTGGACAATCTTAAAGATGCCTTAGTAGGGCTTCCAGGAGTTTCAGGGCTGTCAACAGAACAAAGAAAGAGGTTAACGATTGCAGTTGAGCTTGTTGCCAATCCCTCAATCATTTTCATGGATGAACCAACATCAGGTCTTGATGCAAGGGCAGCTGCCATCGTTATGAGGACTGTTAGAAATACAGTGGACACTGGGAGAACAGTTGTTTGCACAATTCATCAGCCTAGCATAGATATTTTTGAGGCATTCGATGAGCTGCTACTGATGAAGAGAGGAGGACAAGTTATCTACTTAGGACCACTGGGCCGCAATTCTCACAAGATTGTTGAATATTTTGAGGCGGTTCCTGGCGTGCCAAAAATCAAAGAGAAGTACAATCCAGCTACATGGATGCTTGAGGCGAGCTCAACGTCAATTGAGGTCCGGCTTGGAATGGACTTTGCTCAATACTACAAATCATCTGCCTTGTATCAGAGAAACAAAGCTTTAGTAAATGAGTTGAGCACACCACCAGGAGGAGCAAACGACCTCTATTTTCCCACTCAGTTTTCTCAGTCGTCATGGAAGCAATTCCAGTCTTGCCTCTGGAAGCAGTGGTGGACATATTGGAGAAGTCCTGATTATAACCTTGTCAGATTCTTTTTTACCTTGGCAGCAGCCCTTCTCGTGCTACGGTCGATCTATTTTCTGGGATGTTGGCTCAAAAATGGAAAGCAGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1032

Amino Acids

116.23

Weight (kDa)

6.74

Isoelectric Point (pI)

42.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15210 AT1G59870 AT3G16340 AT3G16340
fragaria_vesca	FvH4_6g32310 FvH4_6g32310
malus_domestica	MD09G1203500.v1.1 MD09G1204000.v1.1 MD09G1204200.v1.1 MD09G1204300.v1.1 MD17G1184700.v1.1
prunus_persica	Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059900_v2.0.a1 Prupe.3G060000_v2.0.a1 Prupe.3G060000_v2.0.a1
pyrus_communis	pycom09g12060 pycom09g12080 pycom09g12130 pycom17g19420
rosa_chinensis	RchiOBHm_Chr2g0140401
rosa_laevigata	RLG00000019862
rosa_multiflora	Rmu_sc0008211.1_g000001 Rmu_sc0010411.1_g000005 Rmu_sc0019541.1_g000001 Rmu_sc0019542.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104910
rosa_rugosa	Rorug02G0361800 Rorug02G0361900 Rorug02G0362000 Rorug02G0362100 Rorug02G0362100
rosa_samantha	Rh2AG413100 Rh2BG423600 Rh2CG399300 Rh2DG432500
rosa_wichuraiana	Rw2G033870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	935, 2997
Acc36I	ACCTGC	2 cut(s)	502, 1236
Acc65I	GGTACC	1 cut(s)	2190
AccB1I	GGYRCC	2 cut(s)	99, 2190
AccI	GTMKAC	1 cut(s)	186
AciI	CCGC	7 cut(s)	159, 767, 1353, 1709, 2001, 2680, 2714
AclWI	GGATC	2 cut(s)	571, 1854
AcoI	YGGCCR	1 cut(s)	322
AcsI	RAATTY	5 cut(s)	255, 722, 1413, 2181, 2220
AcuI	CTGAAG	2 cut(s)	1257, 1722
AcvI	CACGTG	1 cut(s)	569
AfaI	GTAC	4 cut(s)	453, 1664, 2192, 2747
AfiI	CCNNNNNNNGG	7 cut(s)	1648, 1931, 2097, 2098, 2397, 2504, 2888
AflIII	ACRYGT	2 cut(s)	596, 1047
AgeI	ACCGGT	1 cut(s)	732
AjiI	CACGTC	1 cut(s)	1431
AjnI	CCWGG	8 cut(s)	558, 666, 1535, 1675, 2074, 2404, 2719, 2884
Alw21I	GWGCWC	7 cut(s)	576, 777, 1009, 1024, 1071, 2780, 2879
Alw26I	GTCTC	8 cut(s)	236, 407, 497, 587, 1107, 1541, 1657, 1912
Alw44I	GTGCAC	1 cut(s)	1020
AlwI	GGATC	2 cut(s)	571, 1854
AoxI	GGCC	5 cut(s)	156, 322, 544, 2072, 2677
ApaLI	GTGCAC	1 cut(s)	1020
ApeKI	GCWGC	9 cut(s)	812, 850, 883, 2038, 2522, 2525, 2629, 3026, 3029
ApoI	RAATTY	5 cut(s)	255, 722, 1413, 2181, 2220
ArsI	GACNNNNNNTTYG	4 cut(s)	949, 981, 1840, 1872
AsiGI	ACCGGT	1 cut(s)	732
Asp700I	GAANNNNTTC	1 cut(s)	2942
Asp718I	GGTACC	1 cut(s)	2190
AspLEI	GCGC	2 cut(s)	1300, 1610
AspS9I	GGNCC	6 cut(s)	362, 972, 1329, 2669, 2677, 2794
AsuC2I	CCSGG	1 cut(s)	2188
AsuHPI	GGTGA	6 cut(s)	359, 1421, 1440, 1556, 2183, 2247
AsuNHI	GCTAGC	1 cut(s)	1241
AvaII	GGWCC	5 cut(s)	362, 972, 1329, 2669, 2794
BaeGI	GKGCMC	1 cut(s)	1024
BalI	TGGCCA	1 cut(s)	324
BanI	GGYRCC	2 cut(s)	99, 2190
BanII	GRGCYC	4 cut(s)	180, 777, 1071, 2780
BauI	CACGAG	1 cut(s)	3038
BbrPI	CACGTG	1 cut(s)	569
BbsI	GAAGAC	3 cut(s)	25, 1771, 2123
Bbv12I	GWGCWC	7 cut(s)	576, 777, 1009, 1024, 1071, 2780, 2879
BbvI	GCAGC	9 cut(s)	824, 862, 870, 2025, 2512, 2534, 2616, 3038, 3041
BccI	CCATC	9 cut(s)	995, 1159, 1187, 1700, 1780, 1808, 2122, 2350, 2537
BceAI	ACGGC	1 cut(s)	969
BcgI	CGANNNNNNTGC	2 cut(s)	2030, 2064
BciT130I	CCWGG	8 cut(s)	560, 668, 1537, 1677, 2076, 2406, 2721, 2886
BclI	TGATCA	1 cut(s)	1335
BcnI	CCSGG	1 cut(s)	2188
BcoDI	GTCTC	8 cut(s)	236, 407, 497, 587, 1107, 1541, 1657, 1912
BfaI	CTAG	8 cut(s)	83, 144, 987, 1242, 1727, 1869, 1877, 2598
BfoI	RGCGCY	1 cut(s)	1611
BfuAI	ACCTGC	2 cut(s)	502, 1236
BlpI	GCTNAGC	1 cut(s)	1065
Bme1390I	CCNGG	9 cut(s)	560, 668, 1537, 1677, 2076, 2188, 2406, 2721, 2886
Bme18I	GGWCC	5 cut(s)	362, 972, 1329, 2669, 2794
BmgBI	CACGTC	1 cut(s)	1431
BmgT120I	GGNCC	6 cut(s)	362, 972, 1329, 2669, 2677, 2794
BmiI	GGNNCC	3 cut(s)	101, 2192, 2718
BmrFI	CCNGG	9 cut(s)	560, 668, 1537, 1677, 2076, 2188, 2406, 2721, 2886
BmrI	ACTGGG	2 cut(s)	2574, 2684
BmsI	GCATC	7 cut(s)	291, 599, 1269, 1301, 2377, 2503, 2754
BmtI	GCTAGC	1 cut(s)	1245
BmuI	ACTGGG	2 cut(s)	2574, 2684
BpiI	GAAGAC	3 cut(s)	25, 1771, 2123
BplI	GAGNNNNNCTC	4 cut(s)	638, 670, 2762, 2794
Bpu1102I	GCTNAGC	1 cut(s)	1065
BpuEI	CTTGAG	2 cut(s)	640, 2789
BpuMI	CCSGG	1 cut(s)	2188
BsaAI	YACGTR	2 cut(s)	569, 709
BsaBI	GATNNNNATC	2 cut(s)	709, 1801
BsaI	GGTCTC	3 cut(s)	407, 1107, 1657
BsaJI	CCNNGG	7 cut(s)	13, 103, 559, 1499, 1536, 2075, 3021
BsaWI	WCCGGW	3 cut(s)	732, 1910, 2153
BsaXI	ACNNNNNCTCC	2 cut(s)	2640, 2670
Bsc4I	CCNNNNNNNGG	7 cut(s)	1648, 1931, 2097, 2098, 2397, 2504, 2888
Bse118I	RCCGGY	1 cut(s)	732
Bse3DI	GCAATG	4 cut(s)	216, 1080, 1787, 1968
Bse8I	GATNNNNATC	2 cut(s)	709, 1801
BseBI	CCWGG	8 cut(s)	560, 668, 1537, 1677, 2076, 2406, 2721, 2886
BseDI	CCNNGG	7 cut(s)	13, 103, 559, 1499, 1536, 2075, 3021
BseGI	GGATG	9 cut(s)	391, 528, 775, 1512, 1772, 2137, 2497, 2769, 3071
BseJI	GATNNNNATC	2 cut(s)	709, 1801
BseLI	CCNNNNNNNGG	7 cut(s)	1648, 1931, 2097, 2098, 2397, 2504, 2888
BseMI	GCAATG	4 cut(s)	216, 1080, 1787, 1968
BseMII	CTCAG	9 cut(s)	126, 453, 492, 606, 1056, 1751, 2304, 2930, 2939
BseRI	GAGGAG	3 cut(s)	1944, 2661, 2904
BseSI	GKGCMC	1 cut(s)	1024
BseXI	GCAGC	9 cut(s)	824, 862, 870, 2025, 2512, 2534, 2616, 3038, 3041
BseYI	CCCAGC	1 cut(s)	2111
Bsh1285I	CGRYCG	1 cut(s)	3050
BshFI	GGCC	5 cut(s)	158, 324, 546, 2074, 2679
BshNI	GGYRCC	2 cut(s)	99, 2190
BshTI	ACCGGT	1 cut(s)	732
BsiEI	CGRYCG	1 cut(s)	3050
BsiHKAI	GWGCWC	7 cut(s)	576, 777, 1009, 1024, 1071, 2780, 2879
BsiSI	CCGG	5 cut(s)	733, 1911, 2154, 2187, 2797
BslFI	GGGAC	2 cut(s)	127, 1369
BslI	CCNNNNNNNGG	7 cut(s)	1648, 1931, 2097, 2098, 2397, 2504, 2888
BsmAI	GTCTC	8 cut(s)	236, 407, 497, 587, 1107, 1541, 1657, 1912
BsmFI	GGGAC	2 cut(s)	127, 1369
BsmI	GAATGC	1 cut(s)	2618
BsnI	GGCC	5 cut(s)	158, 324, 546, 2074, 2679
Bso31I	GGTCTC	3 cut(s)	407, 1107, 1657
Bsp1286I	GDGCHC	8 cut(s)	180, 576, 777, 1009, 1024, 1071, 2780, 2879
Bsp1407I	TGTACA	1 cut(s)	451
Bsp1720I	GCTNAGC	1 cut(s)	1065
BspACI	CCGC	7 cut(s)	159, 767, 1353, 1709, 2001, 2680, 2714
BspANI	GGCC	5 cut(s)	158, 324, 546, 2074, 2679
BspCNI	CTCAG	9 cut(s)	127, 454, 493, 607, 1057, 1752, 2303, 2929, 2938
BspHI	TCATGA	1 cut(s)	195
BspLI	GGNNCC	3 cut(s)	101, 2192, 2718
BspMI	ACCTGC	2 cut(s)	502, 1236
BspOI	GCTAGC	1 cut(s)	1245
BspPI	GGATC	2 cut(s)	571, 1854
BspQI	GCTCTTC	2 cut(s)	1617, 1743
BspT107I	GGYRCC	2 cut(s)	99, 2190
BspTNI	GGTCTC	3 cut(s)	407, 1107, 1657
BsrDI	GCAATG	4 cut(s)	216, 1080, 1787, 1968
BsrFI	RCCGGY	1 cut(s)	732
BsrGI	TGTACA	1 cut(s)	451
BssAI	RCCGGY	1 cut(s)	732
BssECI	CCNNGG	7 cut(s)	13, 103, 559, 1499, 1536, 2075, 3021
BssSI	CACGAG	1 cut(s)	3038
BssT1I	CCWWGG	2 cut(s)	103, 3021
Bst2BI	CACGAG	1 cut(s)	3038
Bst2UI	CCWGG	8 cut(s)	560, 668, 1537, 1677, 2076, 2406, 2721, 2886
Bst6I	CTCTTC	7 cut(s)	142, 1371, 1617, 1637, 1698, 1743, 2636
BstAUI	TGTACA	1 cut(s)	451
BstBAI	YACGTR	2 cut(s)	569, 709
BstC8I	GCNNGC	5 cut(s)	141, 1243, 2001, 2726, 2776
BstDSI	CCRYGG	1 cut(s)	13
BstEII	GGTNACC	1 cut(s)	649
BstF5I	GGATG	9 cut(s)	391, 528, 775, 1512, 1772, 2137, 2497, 2769, 3071
BstH2I	RGCGCY	1 cut(s)	1611
BstHHI	GCGC	2 cut(s)	1300, 1610
BstMAI	GTCTC	8 cut(s)	236, 407, 497, 587, 1107, 1541, 1657, 1912
BstMCI	CGRYCG	1 cut(s)	3050
BstMWI	GCNNNNNNNGC	5 cut(s)	847, 889, 1238, 1306, 2522
BstNI	CCWGG	8 cut(s)	560, 668, 1537, 1677, 2076, 2406, 2721, 2886
BstNSI	RCATGY	4 cut(s)	600, 867, 1051, 1999
BstPI	GGTNACC	1 cut(s)	649
BstSCI	CCNGG	9 cut(s)	558, 666, 1535, 1675, 2074, 2186, 2404, 2719, 2884
BstSLI	GKGCMC	1 cut(s)	1024
BstSNI	TACGTA	1 cut(s)	709
BstV1I	GCAGC	9 cut(s)	824, 862, 870, 2025, 2512, 2534, 2616, 3038, 3041
BstV2I	GAAGAC	3 cut(s)	25, 1771, 2123
BstXI	CCANNNNNNTGG	3 cut(s)	110, 1425, 2760
BsuRI	GGCC	5 cut(s)	158, 324, 546, 2074, 2679
BtgI	CCRYGG	1 cut(s)	13
BtrI	CACGTC	1 cut(s)	1431
BtsCI	GGATG	9 cut(s)	391, 528, 775, 1512, 1772, 2137, 2497, 2769, 3071
BtsI	GCAGTG	1 cut(s)	2972
BtsIMutI	CAGTG	9 cut(s)	459, 966, 1347, 1557, 1981, 2562, 2562, 2672, 2972
BveI	ACCTGC	2 cut(s)	502, 1236
Cac8I	GCNNGC	5 cut(s)	141, 1243, 2001, 2726, 2776
CciI	TCATGA	1 cut(s)	195
CfoI	GCGC	2 cut(s)	1300, 1610
Cfr10I	RCCGGY	1 cut(s)	732
Cfr13I	GGNCC	6 cut(s)	362, 972, 1329, 2669, 2677, 2794
Csp6I	GTAC	4 cut(s)	452, 1663, 2191, 2746
CspAI	ACCGGT	1 cut(s)	732
CspCI	CAANNNNNGTGG	2 cut(s)	1115, 1150
CviQI	GTAC	4 cut(s)	452, 1663, 2191, 2746
EaeI	YGGCCR	1 cut(s)	322
Eam1104I	CTCTTC	7 cut(s)	142, 1371, 1617, 1637, 1698, 1743, 2636
EarI	CTCTTC	7 cut(s)	142, 1371, 1617, 1637, 1698, 1743, 2636
Ecl136II	GAGCTC	3 cut(s)	775, 1069, 2778
Eco105I	TACGTA	1 cut(s)	709
Eco130I	CCWWGG	2 cut(s)	103, 3021
Eco147I	AGGCCT	1 cut(s)	2074
Eco24I	GRGCYC	4 cut(s)	180, 777, 1071, 2780
Eco31I	GGTCTC	3 cut(s)	407, 1107, 1657
Eco32I	GATATC	3 cut(s)	315, 526, 2248
Eco47I	GGWCC	5 cut(s)	362, 972, 1329, 2669, 2794
Eco53kI	GAGCTC	3 cut(s)	775, 1069, 2778
Eco57I	CTGAAG	2 cut(s)	1257, 1722
Eco72I	CACGTG	1 cut(s)	569
Eco91I	GGTNACC	1 cut(s)	649
EcoICRI	GAGCTC	3 cut(s)	775, 1069, 2778
EcoO65I	GGTNACC	1 cut(s)	649
EcoRII	CCWGG	8 cut(s)	558, 666, 1535, 1675, 2074, 2404, 2719, 2884
EcoRV	GATATC	3 cut(s)	315, 526, 2248
EcoT14I	CCWWGG	2 cut(s)	103, 3021
EcoT38I	GRGCYC	4 cut(s)	180, 777, 1071, 2780
ErhI	CCWWGG	2 cut(s)	103, 3021
FalI	AAGNNNNNCTT	4 cut(s)	174, 206, 801, 833
FaqI	GGGAC	2 cut(s)	127, 1369
FauI	CCCGC	2 cut(s)	1346, 2008
FauNDI	CATATG	1 cut(s)	1459
FbaI	TGATCA	1 cut(s)	1335
FblI	GTMKAC	1 cut(s)	186
FokI	GGATG	9 cut(s)	398, 515, 782, 1519, 1759, 2144, 2504, 2776, 3078
FriOI	GRGCYC	4 cut(s)	180, 777, 1071, 2780
FspBI	CTAG	8 cut(s)	83, 144, 987, 1242, 1727, 1869, 1877, 2598
GlaI	GCGC	2 cut(s)	1299, 1609
GsaI	CCCAGC	1 cut(s)	2115
HaeII	RGCGCY	1 cut(s)	1611
HaeIII	GGCC	5 cut(s)	158, 324, 546, 2074, 2679
HapII	CCGG	5 cut(s)	733, 1911, 2154, 2187, 2797
HhaI	GCGC	2 cut(s)	1300, 1610
Hin6I	GCGC	2 cut(s)	1298, 1608
HinP1I	GCGC	2 cut(s)	1298, 1608
HincII	GTYRAC	2 cut(s)	2424, 2445
HindII	GTYRAC	2 cut(s)	2424, 2445
HindIII	AAGCTT	1 cut(s)	2856
HinfI	GANTC	9 cut(s)	694, 1168, 1187, 1357, 1739, 1892, 2276, 2304, 3009
HpaI	GTTAAC	1 cut(s)	2445
HpaII	CCGG	5 cut(s)	733, 1911, 2154, 2187, 2797
HphI	GGTGA	6 cut(s)	359, 1421, 1440, 1556, 2183, 2247
Hpy188I	TCNGA	7 cut(s)	541, 1278, 1500, 1702, 1844, 2847, 3008
Hpy99I	CGWCG	2 cut(s)	421, 1848
HpyAV	CCTTC	9 cut(s)	193, 536, 684, 1127, 1978, 2005, 2012, 2162, 3044
HpyCH4IV	ACGT	5 cut(s)	419, 568, 708, 1430, 2783
HpyF10VI	GCNNNNNNNGC	5 cut(s)	847, 889, 1238, 1306, 2522
HpySE526I	ACGT	5 cut(s)	419, 568, 708, 1430, 2783
HspAI	GCGC	2 cut(s)	1298, 1608
KpnI	GGTACC	1 cut(s)	2194
Ksp22I	TGATCA	1 cut(s)	1335
KspAI	GTTAAC	1 cut(s)	2445
LguI	GCTCTTC	2 cut(s)	1617, 1743
LmnI	GCTCC	6 cut(s)	416, 502, 670, 1004, 1501, 2891
Lsp1109I	GCAGC	9 cut(s)	824, 862, 870, 2025, 2512, 2534, 2616, 3038, 3041
LweI	GCATC	7 cut(s)	291, 599, 1269, 1301, 2377, 2503, 2754
MaeI	CTAG	8 cut(s)	83, 144, 987, 1242, 1727, 1869, 1877, 2598
MaeII	ACGT	5 cut(s)	419, 568, 708, 1430, 2783
MaeIII	GTNAC	9 cut(s)	337, 649, 715, 1531, 2056, 2159, 2171, 2228, 2263
MfeI	CAATTG	2 cut(s)	285, 2787
MhlI	GDGCHC	8 cut(s)	180, 576, 777, 1009, 1024, 1071, 2780, 2879
MlsI	TGGCCA	1 cut(s)	324
MluNI	TGGCCA	1 cut(s)	324
MlyI	GAGTC	3 cut(s)	688, 1351, 2298
MmeI	TCCRAC	6 cut(s)	37, 271, 340, 514, 1368, 1867
Mox20I	TGGCCA	1 cut(s)	324
MroXI	GAANNNNTTC	1 cut(s)	2942
MscI	TGGCCA	1 cut(s)	324
MseI	TTAA	6 cut(s)	1044, 1053, 1557, 1980, 2382, 2444
MslI	CAYNNNNRTG	3 cut(s)	1046, 2486, 2534
Msp20I	TGGCCA	1 cut(s)	324
MspA1I	CMGCKG	3 cut(s)	161, 2003, 2525
MspI	CCGG	5 cut(s)	733, 1911, 2154, 2187, 2797
MspR9I	CCNGG	9 cut(s)	560, 668, 1537, 1677, 2076, 2188, 2406, 2721, 2886
MunI	CAATTG	2 cut(s)	285, 2787
Mva1269I	GAATGC	1 cut(s)	2618
MvaI	CCWGG	8 cut(s)	560, 668, 1537, 1677, 2076, 2406, 2721, 2886
MwoI	GCNNNNNNNGC	5 cut(s)	847, 889, 1238, 1306, 2522
NciI	CCSGG	1 cut(s)	2188
NdeI	CATATG	1 cut(s)	1459
NheI	GCTAGC	1 cut(s)	1241
NlaIV	GGNNCC	3 cut(s)	101, 2192, 2718
NmuCI	GTSAC	3 cut(s)	715, 2171, 2263
NspI	RCATGY	4 cut(s)	600, 867, 1051, 1999
PagI	TCATGA	1 cut(s)	195
PceI	AGGCCT	1 cut(s)	2074
PciI	ACATGT	2 cut(s)	596, 1047
PciSI	GCTCTTC	2 cut(s)	1617, 1743
PctI	GAATGC	1 cut(s)	2618
PdmI	GAANNNNTTC	1 cut(s)	2942
PfeI	GAWTC	6 cut(s)	1168, 1187, 1739, 1892, 2276, 3009
PfoI	TCCNGGA	2 cut(s)	1675, 2404
PinAI	ACCGGT	1 cut(s)	732
PleI	GAGTC	3 cut(s)	688, 1351, 2298
PmaCI	CACGTG	1 cut(s)	569
PmlI	CACGTG	1 cut(s)	569
PpsI	GAGTC	3 cut(s)	688, 1351, 2298
Ppu21I	YACGTR	2 cut(s)	569, 709
PscI	ACATGT	2 cut(s)	596, 1047
PsiI	TTATAA	2 cut(s)	935, 2997
Psp124BI	GAGCTC	3 cut(s)	777, 1071, 2780
Psp6I	CCWGG	8 cut(s)	558, 666, 1535, 1675, 2074, 2404, 2719, 2884
PspCI	CACGTG	1 cut(s)	569
PspEI	GGTNACC	1 cut(s)	649
PspFI	CCCAGC	1 cut(s)	2111
PspGI	CCWGG	8 cut(s)	558, 666, 1535, 1675, 2074, 2404, 2719, 2884
PspN4I	GGNNCC	3 cut(s)	101, 2192, 2718
PspPI	GGNCC	6 cut(s)	362, 972, 1329, 2669, 2677, 2794
PvuII	CAGCTG	1 cut(s)	2525
RsaI	GTAC	4 cut(s)	453, 1664, 2192, 2747
RsaNI	GTAC	4 cut(s)	452, 1663, 2191, 2746
RseI	CAYNNNNRTG	3 cut(s)	1046, 2486, 2534
SacI	GAGCTC	3 cut(s)	777, 1071, 2780
SapI	GCTCTTC	2 cut(s)	1617, 1743
SaqAI	TTAA	6 cut(s)	1044, 1053, 1557, 1980, 2382, 2444
Sau96I	GGNCC	6 cut(s)	362, 972, 1329, 2669, 2677, 2794
SchI	GAGTC	3 cut(s)	688, 1351, 2298
ScrFI	CCNGG	9 cut(s)	560, 668, 1537, 1677, 2076, 2188, 2406, 2721, 2886
SduI	GDGCHC	8 cut(s)	180, 576, 777, 1009, 1024, 1071, 2780, 2879
SfaNI	GCATC	7 cut(s)	291, 599, 1269, 1301, 2377, 2503, 2754
SinI	GGWCC	5 cut(s)	362, 972, 1329, 2669, 2794
SmiMI	CAYNNNNRTG	3 cut(s)	1046, 2486, 2534
SmlI	CTYRAG	2 cut(s)	655, 2768
SmoI	CTYRAG	2 cut(s)	655, 2768
SnaBI	TACGTA	1 cut(s)	709
SseBI	AGGCCT	1 cut(s)	2074
SsiI	CCGC	7 cut(s)	159, 767, 1353, 1709, 2001, 2680, 2714
SspI	AATATT	1 cut(s)	2705
SspMI	CTAG	8 cut(s)	83, 144, 987, 1242, 1727, 1869, 1877, 2598
SstI	GAGCTC	3 cut(s)	777, 1071, 2780
StuI	AGGCCT	1 cut(s)	2074
StyD4I	CCNGG	9 cut(s)	558, 666, 1535, 1675, 2074, 2186, 2404, 2719, 2884
StyI	CCWWGG	2 cut(s)	103, 3021
TaiI	ACGT	5 cut(s)	422, 571, 711, 1433, 2786
TaqI	TCGA	9 cut(s)	405, 607, 789, 1795, 1858, 1902, 1971, 2622, 3050
TaqII	GACCGA	2 cut(s)	703, 989
TatI	WGTACW	2 cut(s)	451, 2745
TauI	GCSGC	3 cut(s)	161, 1712, 2682
TfiI	GAWTC	6 cut(s)	1168, 1187, 1739, 1892, 2276, 3009
Tru1I	TTAA	6 cut(s)	1044, 1053, 1557, 1980, 2382, 2444
Tru9I	TTAA	6 cut(s)	1044, 1053, 1557, 1980, 2382, 2444
TscAI	CASTG	9 cut(s)	466, 966, 1354, 1557, 1981, 2562, 2569, 2679, 2972
TseFI	GTSAC	3 cut(s)	715, 2171, 2263
TseI	GCWGC	9 cut(s)	812, 850, 883, 2038, 2522, 2525, 2629, 3026, 3029
Tsp45I	GTSAC	3 cut(s)	715, 2171, 2263
TspGWI	ACGGA	1 cut(s)	30
TspRI	CASTG	9 cut(s)	466, 966, 1354, 1557, 1981, 2562, 2569, 2679, 2972
VneI	GTGCAC	1 cut(s)	1020
VpaK11BI	GGWCC	5 cut(s)	362, 972, 1329, 2669, 2794
XapI	RAATTY	5 cut(s)	255, 722, 1413, 2181, 2220
XceI	RCATGY	4 cut(s)	600, 867, 1051, 1999
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1933
XmiI	GTMKAC	1 cut(s)	186
XmnI	GAANNNNTTC	1 cut(s)	2942
XspI	CTAG	8 cut(s)	83, 144, 987, 1242, 1727, 1869, 1877, 2598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.