AT3G16340
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0002725
Physical Location & Seq
Forward (+)
5539385 .. 5546487
7103 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G16340.1

Sequence Viewer

Length: 4251 bp
ATGGAGACGTTATCGAGAAGCCTAAGTAAGAGCTTAGGAGAGTTGTTAGCGAGTAATAGTAATAACCATTTCTCAAGGAGAAGCGGTTCAACGATAGATGATCACGATGAGGAAGCTCTTAAATGGGCTGCTCTCGAGAAACTTCCAACCTTTGCTCGTCTTCGTACCACTATCATTCATCCTCACGAAGATCTCGTCGACGTTACCAAGCTCGGTGTTGATGATCGCCAGAAGTTCATCGATTCTATCTTCAAAGTCACCGAGGAAGATAACGAGAAGTTCTTGAAAAAGTTTAGGAATCGAATCGACAGGGTGCGGATAAAGCTACCGACAGTGGAAGTGAGATTCGAGAAAGTAACGATAGAGGCGAATTGTCACATAGGAAAAAGAGCTCTTCCCACATTACCCAACGCTGCTTTAAACATTGCAGAGAGAGGTCTTCGTTTGCTTGGTTTTAACTTTACAAAAACCACTAAAGTCACTATTCTTAGAGACGTCTCCGGGATTATCAAACCTTCAAGAATGACACTTTTATTAGGTCCACCATCATCAGGGAAAACAACTCTTTTATTAGCGTTAGCTGGAAAACTAGACCAAAGCTTAAAGGTGACAGGGAGAGTAACATACAATGGGCATGGATTGGAAGAGTTTGTGCCACAGAAAACATCAGCATACATAAGCCAAAACGATGTTCATGTTGGAGTCATGACTGTCCAAGAAACTCTTGATTTTTCTGCTAGATGTCAAGGAGTTGGCACTAGATATGATTTGTTAAGTGAGTTGGTGAGAAGAGAGAAGGACGCAGGGATCTTGCCGGAACCGGAAGTGGATCTCTTCATGAAGTCCATTGCAGCTGGAAATGTCAAGAGCAGTCTCATCACAGACTATACTCTCAGAATATTAGGGCTTGACATATGCAAAGATACGGTGGTCGGAGATGAGATGATTCGAGGAATCTCGGGAGGTCAAAAGAAAAGAGTCACAACAGGAGAGATGATAGTAGGACCAACAAAGACATTGTTCATGGATGAGATATCGACAGGTCTAGACAGTTCAACAACGTACCAAATAGTGAAATGCCTTCAAGAGATTGTTCGGTTCACGGACGCAACGGTTCTCATGTCCTTATTACAACCAGCTCCTGAAACGTTCGAACTTTTCGATGACATCATTCTATTGTCTGAAGGACAGATCGTGTACCAAGGTCCACGTGATCATGTTCTTACCTTCTTTGAAACTTGCGGTTTCAAGTGTCCCGACCGCAAAGGCACCGCAGATTTCTTGCAAGAGGTAACTTCAAGGAAAGACCAAGAACAGTATTGGGCAGACTCAAAAAAACCATACAGTTACATTTCTGTCTCTGAATTCTCCAAACGATTCAGAACCTTCCATGTCGGAGCCAATCTTGAAAAAGATCTATCAGTCCCTTACGACAGATTCAAATCACACCCAGCTTCTCTCGTCTTCAAGAAACACTCTGTTCCGAAATCTCAACTCTTCAAGGTCTGTTGGGACAGAGAATTGCTTCTCATGAAACGTAACGCTTTCTTCTACATTACCAAAACAGTTCAAATTATCATTATGGCTTTGATTGCGTCGACCGTGTACCTGAGAACGGAGATGGGAACAAAGAACGAGAGTGATGGAGCCGTCTACATCGGTGCGTTGATGTTCTCCATGATCGTTAACATGTTTAATGGATTTGCAGAGCTTGCTTTGATGATTCAGAGACTTCCCGTGTTCTACAAGCAACGAGACCTTTTGTTTCATCCTCCTTGGACCTTCAGTCTTCCAACATTTCTCTTGGGTATTCCTATCTCCATCTTCGAATCTGTTGTTTGGGTCACCATTACTTATTACATGATCGGATTTGCTCCAGAACTCAGCAGGTTCTTGAAGCATTTGTTGGTGATATTTCTGACACAGCAAATGGCTGGTGGTATATTTAGGTTCATCGCGGCAACTTGCAGATCGATGATTCTTGCTAATACGGGAGGAGCTCTAGTTATCCTCCTCCTCTTCTTGCTTGGAGGGTTCATTGTTCCTAGAGGTGAGATACCTAAATGGTGGAAATGGGCTTACTGGGTTTCACCAATGGCTTACACTTACGATGCTTTAACTGTCAATGAAATGCTTGCTCCTAGATGGATTAATCAACCGTCTTCTGATAACTCCACGAGCTTAGGGTTGGCTGTTCTTGAGATTTTCGATATTTTCACGGATCCAAACTGGTATTGGATCGGGGTAGGAGGCATTCTCGGGTTTACGGTTCTCTTTAACATCCTCGTTACCCTCGCTCTTACATTCCTAAACCCACTTGAGAAACAGCAAGCCGTTGTTTCAAAAGAAAATACAGAGGAAAACAGAGCAGAGAACGGCTCAAAGAGTAAGAGCATTGACGTGAAAAGAGGAATGGTTCTACCTTTTACTCCTCTCACAATGTCCTTCGACAACGTAAACTACTACGTCGACATGCCTAAGGAAATGAAGGAACAAGGAGTTTCCAAGGATAAGCTTCAGCTACTAAAGGAAGTGACAGGGGTCTTTAGGCCAGGGGTATTAACAGCTTTGATGGGAGTTAGTGGAGCTGGTAAGACCACTTTAATGGATGTTTTAGCTGGTAGAAAAACCGGTGGTTACATCGAAGGAGACATCAGAATCTCTGGTTTCCCTAAAAGACAAGAAACCTTTGCAAGAATCTCTGGTTATTGTGAACAGAACGATATCCACTCACCGCAAGTTACTGTCAAAGAGTCTCTCATCTACTCTGCTTTCCTTCGTCTCCCAAAAGAAGTCACTAAATATGAGAAAATGAGATTTGTGGATGAAGTGATGGAGCTAGTAGAGCTAGAGAGTCTAAAAGACGCGGTGGTGGGGCTTCCAGGTATCACAGGGTTATCAACAGAGCAGAGGAAGAGACTTACAATTGCAGTGGAATTAGTGGCGAATCCATCTATAATCTTCATGGATGAGCCAACCTCTGGTCTTGACGCTAGGGCTGCAGCGATTGTGATGAGGACAGTGAGGAATACAGTTGACACAGGAAGAACTGTGGTCTGCACAATCCACCAACCTAGCATTGATATCTTTGAAGCTTTTGATGAACTTCTTCTTTTGAAGAGAGGAGGACAAGTGATTTATGCTGGTCCTTTAGGTCAAAACTCTCACAAGATTATCGAATATTTCCAGGCGATTCATGGAGTTCCGAAGATTAAAGAGAAGTATAATCCGGCGACATGGATGCTAGAAGTGAGCTCAATGGCTGCAGAAGCTAAGCTTGAGATAGATTTTGCTGAGCATTATAAAACATCATCCTTATATCAACAAAACAAGAATCTTGTAAAGGAACTAAGCACACCACCACAAGGAGCAAGCGATCTCTACTTCTCAACGCGGTTCTCACAATCATTGTTAGGACAATTCAAATCTTGTTTGTGGAAGCAGTGGATAACTTACTGGAGAACTCCTGACTACAATCTAGCAAGATTTTTCTTTACATTGGCTGCAGCTGTCATGCTCGGATCAATTTTCTGGAAAGTTGGCACAAAAAGGGAAAACGCTAATGATCTTACAAAGGTTATTGGAGCAATGTATGCTGCTGTTTTATTCGTGGGCGTAAACAACTCTTCATCTGTCCAACCGCTAATAGCCGTGGAAAGATCTGTATTCTATAGAGAAAGAGCTGCTGAAATGTACTCTGCTTTACCTTATGCCCTAGCACAGGTGGTATGCGAAATACCGTATGTGCTGATCCAAACTACATATTATACACTAATTATATACGCCATGATGTGTTTCGAATGGACATTGGCCAAATTCTTTTGGTTTTACTTCGTATCATTTATGTCCTTCCTCTACTTCACATACTATGGGATGATGACAGTTGCCCTCACCCCAAATCAGCAAGTTGCAGCTGTTTTTGCCGGAGCTTTCTACGGACTTTTCAACCTCTTTTCTGGTTTTGTCATTCCTAGACCGAGAATTCCGAAATGGTGGATATGGTATTACTGGATCTGTCCAGTGGCTTGGACTGTGTATGGATTGATTGTTTCGCAGTACGGTGACGTGGAGGATACGATTAAAGTTCCGGGTATGGCAAATGATCCGACGATAAAGTGGTACATTGAAAACCACTATGGATACGACGCAGATTTTATGATACCGATTGCTACTGTGTTAGTGGGCTTTACTCTCTTTTTTGCGTTTATGTTTGCTTTTGGCATAAGAACGCTCAACTTCCAACAACGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000041 GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005886 GO:0006082 GO:0006725 GO:0006790 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008324 GO:0009056 GO:0009507 GO:0009526 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009814 GO:0009817 GO:0009889 GO:0009941 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0015075 GO:0015086 GO:0015318 GO:0015399 GO:0015405 GO:0015691 GO:0015850 GO:0015893 GO:0016020 GO:0016021 GO:0016043 GO:0016143 GO:0016145 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019439 GO:0019748 GO:0019757 GO:0019759 GO:0019760 GO:0019762 GO:0022804 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031323 GO:0031326 GO:0031347 GO:0031348 GO:0031967 GO:0031975 GO:0032870 GO:0033036 GO:0033037 GO:0033554 GO:0033993 GO:0034220 GO:0034641 GO:0042221 GO:0042343 GO:0042344 GO:0042430 GO:0042436 GO:0042493 GO:0042545 GO:0042623 GO:0042626 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043455 GO:0043492 GO:0044237 GO:0044248 GO:0044270 GO:0044273 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045229 GO:0046483 GO:0046700 GO:0046873 GO:0046915 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0055085 GO:0065007 GO:0070574 GO:0070727 GO:0070838 GO:0070887 GO:0071229 GO:0071310 GO:0071365 GO:0071366 GO:0071407 GO:0071417 GO:0071495 GO:0071554 GO:0071555 GO:0071702 GO:0071704 GO:0071840 GO:0071944 GO:0072511 GO:0080026 GO:0080134 GO:0097305 GO:0098542 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1900376 GO:1901135 GO:1901136 GO:1901140 GO:1901141 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901657 GO:1901658 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:2000762
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1416

Amino Acids

160.3

Weight (kDa)

8.53

Isoelectric Point (pI)

33.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 88 - 138 1.7e-07 ABC-transporter N-terminal
ABC_tran PF00005 163 - 344 8.4e-13 ABC transporter
ABC2_membrane PF01061 499 - 710 1.4e-56 ABC-2 type transporter
PDR_assoc PF08370 716 - 780 3e-26 Plant PDR ABC transporter associated
ABC_tran PF00005 842 - 994 7.1e-20 ABC transporter
ABC2_membrane_7 PF19055 1023 - 1084 3.9e-06 ABC-2 type transporter
ABC2_membrane PF01061 1140 - 1353 5e-61 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3303
AatII GACGTC 1 cut(s) 498
Acc36I ACCTGC 1 cut(s) 1878
AccB1I GGYRCC 1 cut(s) 1268
AccB7I CCANNNNNTGG 1 cut(s) 2981
AccI GTMKAC 4 cut(s) 198, 1598, 1653, 2469
AccII CGCG 3 cut(s) 1958, 2867, 3394
AclI AACGTT 1 cut(s) 1148
AclWI GGATC 9 cut(s) 815, 837, 2216, 2229, 2246, 3529, 3745, 4019, 4097
AcoI YGGCCR 1 cut(s) 3810
AcsI RAATTY 3 cut(s) 1364, 3815, 3981
AcuI CTGAAG 3 cut(s) 1203, 1768, 2501
AcvI CACGTG 1 cut(s) 1211
AcyI GRCGYC 1 cut(s) 495
AfaI GTAC 7 cut(s) 166, 1064, 1199, 1607, 3695, 4058, 4121
AfiI CCNNNNNNNGG 5 cut(s) 551, 1615, 2981, 3365, 3721
AflIII ACRYGT 1 cut(s) 1689
AgeI ACCGGT 1 cut(s) 2630
AhdI GACNNNNNGTC 1 cut(s) 1785
AjiI CACGTC 2 cut(s) 2401, 4066
AjnI CCWGG 3 cut(s) 2551, 2881, 3186
AjuI GAANNNNNNNTTGG 4 cut(s) 675, 707, 1889, 1921
AloI GAACNNNNNNTCC 2 cut(s) 70, 102
Alw21I GWGCWC 3 cut(s) 394, 2002, 3257
AlwI GGATC 9 cut(s) 815, 837, 2216, 2229, 2246, 3529, 3745, 4019, 4097
AlwNI CAGNNNCTG 1 cut(s) 1142
Ama87I CYCGRG 3 cut(s) 134, 958, 2258
AoxI GGCC 2 cut(s) 2549, 3810
ApoI RAATTY 3 cut(s) 1364, 3815, 3981
ArsI GACNNNNNNTTYG 2 cut(s) 180, 212
AseI ATTAAT 1 cut(s) 2151
AsiGI ACCGGT 1 cut(s) 2630
Asp700I GAANNNNTTC 3 cut(s) 85, 1524, 3108
AspS9I GGNCC 5 cut(s) 539, 1004, 1205, 1779, 3146
AsuC2I CCSGG 2 cut(s) 502, 4089
AsuII TTCGAA 3 cut(s) 1152, 1827, 3798
AvaI CYCGRG 3 cut(s) 134, 958, 2258
AvaII GGWCC 5 cut(s) 539, 1004, 1205, 1779, 3146
AxyI CCTNAGG 1 cut(s) 2478
BaeI ACNNNNGTAYC 2 cut(s) 915, 948
BalI TGGCCA 1 cut(s) 3812
BamHI GGATCC 1 cut(s) 2221
BanI GGYRCC 1 cut(s) 1268
BanII GRGCYC 3 cut(s) 394, 2002, 3257
BauI CACGAG 1 cut(s) 2176
BbrPI CACGTG 1 cut(s) 1211
BbsI GAAGAC 5 cut(s) 152, 431, 1456, 1781, 2154
Bbv12I GWGCWC 3 cut(s) 394, 2002, 3257
BccI CCATC 8 cut(s) 553, 1615, 1637, 1829, 2139, 2566, 2827, 2959
BceAI ACGGC 4 cut(s) 1634, 2318, 2392, 3635
BcgI CGANNNNNNTGC 2 cut(s) 3223, 3257
BciT130I CCWGG 3 cut(s) 2553, 2883, 3188
BciVI GTATCC 2 cut(s) 4066, 4133
BclI TGATCA 2 cut(s) 100, 1213
BcnI CCSGG 2 cut(s) 502, 4089
BfmI CTRYAG 4 cut(s) 3000, 3264, 3504, 3670
BfuAI ACCTGC 1 cut(s) 1878
BfuI GTATCC 2 cut(s) 4066, 4133
BglII AGATCT 3 cut(s) 190, 1414, 3659
BlpI GCTNAGC 2 cut(s) 3273, 3294
Bme1390I CCNGG 5 cut(s) 502, 2553, 2883, 3188, 4089
Bme18I GGWCC 5 cut(s) 539, 1004, 1205, 1779, 3146
BmeRI GACNNNNNGTC 1 cut(s) 1785
BmeT110I CYCGRG 3 cut(s) 134, 958, 2258
BmgBI CACGTC 2 cut(s) 2401, 4066
BmgT120I GGNCC 5 cut(s) 539, 1004, 1205, 1779, 3146
BmiI GGNNCC 5 cut(s) 819, 1270, 1399, 1648, 2223
BmrFI CCNGG 5 cut(s) 502, 2553, 2883, 3188, 4089
BmrI ACTGGG 1 cut(s) 2092
BmsI GCATC 2 cut(s) 2101, 3231
BmuI ACTGGG 1 cut(s) 2092
BoxI GACNNNNGTC 1 cut(s) 2540
BpiI GAAGAC 5 cut(s) 152, 431, 1456, 1781, 2154
BplI GAGNNNNNCTC 6 cut(s) 2241, 2273, 2363, 2395, 2963, 2995
BpmI CTGGAG 2 cut(s) 1860, 3478
Bpu10I CCTNAGC 2 cut(s) 34, 2182
Bpu1102I GCTNAGC 2 cut(s) 3273, 3294
Bpu14I TTCGAA 3 cut(s) 1152, 1827, 3798
BpuEI CTTGAG 4 cut(s) 58, 2219, 2339, 3299
BpuMI CCSGG 2 cut(s) 502, 4089
Bsa29I ATCGAT 2 cut(s) 240, 1973
BsaAI YACGTR 1 cut(s) 1211
BsaBI GATNNNNATC 1 cut(s) 1441
BsaHI GRCGYC 1 cut(s) 495
BsaI GGTCTC 1 cut(s) 1749
BsaJI CCNNGG 6 cut(s) 261, 1201, 1775, 2505, 2552, 3651
BsaWI WCCGGW 2 cut(s) 820, 2630
BsaXI ACNNNNNCTCC 6 cut(s) 70, 100, 1989, 2019, 3117, 3147
Bsc4I CCNNNNNNNGG 5 cut(s) 551, 1615, 2981, 3365, 3721
Bse118I RCCGGY 1 cut(s) 2630
Bse1I ACTGG 5 cut(s) 2087, 2234, 3461, 4013, 4019
Bse21I CCTNAGG 1 cut(s) 2478
Bse3DI GCAATG 3 cut(s) 423, 846, 3594
Bse8I GATNNNNATC 1 cut(s) 1441
BseBI CCWGG 3 cut(s) 2553, 2883, 3188
BseCI ATCGAT 2 cut(s) 240, 1973
BseDI CCNNGG 6 cut(s) 261, 1201, 1775, 2505, 2552, 3651
BseJI GATNNNNATC 1 cut(s) 1441
BseLI CCNNNNNNNGG 5 cut(s) 551, 1615, 2981, 3365, 3721
BseMI GCAATG 3 cut(s) 423, 846, 3594
BseMII CTCAG 4 cut(s) 907, 1601, 1897, 3285
BseNI ACTGG 5 cut(s) 2087, 2234, 3461, 4013, 4019
BseRI GAGGAG 5 cut(s) 2003, 2006, 2010, 2421, 3138
BseYI CCCAGC 1 cut(s) 1450
BsgI GTGCAG 1 cut(s) 3043
Bsh1236I CGCG 3 cut(s) 1958, 2867, 3394
Bsh1285I CGRYCG 2 cut(s) 1261, 1602
BshFI GGCC 2 cut(s) 2551, 3812
BshNI GGYRCC 1 cut(s) 1268
BshTI ACCGGT 1 cut(s) 2630
BshVI ATCGAT 2 cut(s) 240, 1973
BsiEI CGRYCG 2 cut(s) 1261, 1602
BsiHKAI GWGCWC 3 cut(s) 394, 2002, 3257
BsiHKCI CYCGRG 3 cut(s) 134, 958, 2258
BsiSI CCGG 7 cut(s) 501, 815, 821, 2631, 3230, 3924, 4088
BslFI GGGAC 3 cut(s) 1239, 1409, 1526
BslI CCNNNNNNNGG 5 cut(s) 551, 1615, 2981, 3365, 3721
BsmBI CGTCTC 3 cut(s) 486, 502, 2786
BsmFI GGGAC 3 cut(s) 1239, 1409, 1526
BsmI GAATGC 1 cut(s) 2253
BsnI GGCC 2 cut(s) 2551, 3812
Bso31I GGTCTC 1 cut(s) 1749
BsoBI CYCGRG 3 cut(s) 134, 958, 2258
Bsp119I TTCGAA 3 cut(s) 1152, 1827, 3798
Bsp1286I GDGCHC 3 cut(s) 394, 2002, 3257
Bsp1720I GCTNAGC 2 cut(s) 3273, 3294
BspANI GGCC 2 cut(s) 2551, 3812
BspCNI CTCAG 4 cut(s) 906, 1602, 1896, 3286
BspDI ATCGAT 2 cut(s) 240, 1973
BspFNI CGCG 3 cut(s) 1958, 2867, 3394
BspHI TCATGA 3 cut(s) 705, 837, 1530
BspLI GGNNCC 5 cut(s) 819, 1270, 1399, 1648, 2223
BspMAI CTGCAG 3 cut(s) 3004, 3268, 3508
BspMI ACCTGC 1 cut(s) 1878
BspPI GGATC 9 cut(s) 815, 837, 2216, 2229, 2246, 3529, 3745, 4019, 4097
BspQI GCTCTTC 1 cut(s) 399
BspT104I TTCGAA 3 cut(s) 1152, 1827, 3798
BspT107I GGYRCC 1 cut(s) 1268
BspTNI GGTCTC 1 cut(s) 1749
BsrDI GCAATG 3 cut(s) 423, 846, 3594
BsrFI RCCGGY 1 cut(s) 2630
BsrI ACTGG 5 cut(s) 2087, 2234, 3461, 4013, 4019
BssAI RCCGGY 1 cut(s) 2630
BssECI CCNNGG 6 cut(s) 261, 1201, 1775, 2505, 2552, 3651
BssNI GRCGYC 1 cut(s) 495
BssSI CACGAG 1 cut(s) 2176
BssT1I CCWWGG 3 cut(s) 1201, 1775, 2505
Bst2BI CACGAG 1 cut(s) 2176
Bst2UI CCWGG 3 cut(s) 2553, 2883, 3188
Bst6I CTCTTC 9 cut(s) 399, 639, 784, 839, 1502, 2024, 2909, 3113, 3631
BstACI GRCGYC 1 cut(s) 495
BstAPI GCANNNNNTGC 2 cut(s) 1712, 3593
BstBAI YACGTR 1 cut(s) 1211
BstBI TTCGAA 3 cut(s) 1152, 1827, 3798
BstC8I GCNNGC 4 cut(s) 1713, 2136, 2331, 3373
BstDSI CCRYGG 1 cut(s) 3651
BstEII GGTNACC 1 cut(s) 1843
BstENI CCTNNNNNAGG 1 cut(s) 3719
BstFNI CGCG 3 cut(s) 1958, 2867, 3394
BstMCI CGRYCG 2 cut(s) 1261, 1602
BstMWI GCNNNNNNNGC 8 cut(s) 322, 1592, 1712, 2845, 2999, 3269, 3593, 3920
BstNI CCWGG 3 cut(s) 2553, 2883, 3188
BstNSI RCATGY 2 cut(s) 1693, 2476
BstPAI GACNNNNGTC 1 cut(s) 2540
BstPI GGTNACC 1 cut(s) 1843
BstSCI CCNGG 5 cut(s) 500, 2551, 2881, 3186, 4087
BstSFI CTRYAG 4 cut(s) 3000, 3264, 3504, 3670
BstUI CGCG 3 cut(s) 1958, 2867, 3394
BstV2I GAAGAC 5 cut(s) 152, 431, 1456, 1781, 2154
BstX2I RGATCY 7 cut(s) 190, 807, 829, 1414, 2221, 3659, 4011
BstXI CCANNNNNNTGG 2 cut(s) 2605, 4026
BstYI RGATCY 7 cut(s) 190, 807, 829, 1414, 2221, 3659, 4011
Bsu15I ATCGAT 2 cut(s) 240, 1973
Bsu36I CCTNAGG 1 cut(s) 2478
BsuI GTATCC 2 cut(s) 4066, 4133
BsuRI GGCC 2 cut(s) 2551, 3812
BsuTUI ATCGAT 2 cut(s) 240, 1973
BtgI CCRYGG 1 cut(s) 3651
BtgZI GCGATG 1 cut(s) 1939
BtrI CACGTC 2 cut(s) 2401, 4066
BtsI GCAGTG 2 cut(s) 2937, 3449
BtsIMutI CAGTG 5 cut(s) 339, 2937, 3027, 3449, 4026
BveI ACCTGC 1 cut(s) 1878
Cac8I GCNNGC 4 cut(s) 1713, 2136, 2331, 3373
CaiI CAGNNNCTG 1 cut(s) 1142
CciI TCATGA 3 cut(s) 705, 837, 1530
Cfr10I RCCGGY 1 cut(s) 2630
Cfr13I GGNCC 5 cut(s) 539, 1004, 1205, 1779, 3146
ClaI ATCGAT 2 cut(s) 240, 1973
CseI GACGC 6 cut(s) 809, 1115, 1584, 2873, 2999, 4154
Csp6I GTAC 7 cut(s) 165, 1063, 1198, 1606, 3694, 4057, 4120
CspAI ACCGGT 1 cut(s) 2630
CspCI CAANNNNNGTGG 2 cut(s) 2913, 2948
CviQI GTAC 7 cut(s) 165, 1063, 1198, 1606, 3694, 4057, 4120
DraI TTTAAA 1 cut(s) 420
DriI GACNNNNNGTC 1 cut(s) 1785
EaeI YGGCCR 1 cut(s) 3810
Eam1104I CTCTTC 9 cut(s) 399, 639, 784, 839, 1502, 2024, 2909, 3113, 3631
Eam1105I GACNNNNNGTC 1 cut(s) 1785
EarI CTCTTC 9 cut(s) 399, 639, 784, 839, 1502, 2024, 2909, 3113, 3631
Ecl136II GAGCTC 3 cut(s) 392, 2000, 3255
Eco130I CCWWGG 3 cut(s) 1201, 1775, 2505
Eco24I GRGCYC 3 cut(s) 394, 2002, 3257
Eco31I GGTCTC 1 cut(s) 1749
Eco32I GATATC 3 cut(s) 1035, 2725, 3085
Eco47I GGWCC 5 cut(s) 539, 1004, 1205, 1779, 3146
Eco53kI GAGCTC 3 cut(s) 392, 2000, 3255
Eco57I CTGAAG 3 cut(s) 1203, 1768, 2501
Eco72I CACGTG 1 cut(s) 1211
Eco81I CCTNAGG 1 cut(s) 2478
Eco88I CYCGRG 3 cut(s) 134, 958, 2258
Eco91I GGTNACC 1 cut(s) 1843
EcoICRI GAGCTC 3 cut(s) 392, 2000, 3255
EcoNI CCTNNNNNAGG 1 cut(s) 3719
EcoO65I GGTNACC 1 cut(s) 1843
EcoRI GAATTC 2 cut(s) 1364, 3981
EcoRII CCWGG 3 cut(s) 2551, 2881, 3186
EcoRV GATATC 3 cut(s) 1035, 2725, 3085
EcoT14I CCWWGG 3 cut(s) 1201, 1775, 2505
EcoT38I GRGCYC 3 cut(s) 394, 2002, 3257
ErhI CCWWGG 3 cut(s) 1201, 1775, 2505
Esp3I CGTCTC 3 cut(s) 486, 502, 2786
FalI AAGNNNNNCTT 4 cut(s) 708, 740, 3261, 3293
FaqI GGGAC 3 cut(s) 1239, 1409, 1526
FauNDI CATATG 1 cut(s) 914
FbaI TGATCA 2 cut(s) 100, 1213
FblI GTMKAC 4 cut(s) 198, 1598, 1653, 2469
FriOI GRGCYC 3 cut(s) 394, 2002, 3257
GsaI CCCAGC 1 cut(s) 1454
GsuI CTGGAG 2 cut(s) 1860, 3478
HaeIII GGCC 2 cut(s) 2551, 3812
HapII CCGG 7 cut(s) 501, 815, 821, 2631, 3230, 3924, 4088
HgaI GACGC 6 cut(s) 809, 1115, 1584, 2873, 2999, 4154
Hin1I GRCGYC 1 cut(s) 495
HincII GTYRAC 5 cut(s) 199, 1599, 1687, 2470, 3037
HindII GTYRAC 5 cut(s) 199, 1599, 1687, 2470, 3037
HindIII AAGCTT 4 cut(s) 598, 2513, 3093, 3275
HpaI GTTAAC 1 cut(s) 1687
HpaII CCGG 7 cut(s) 501, 815, 821, 2631, 3230, 3924, 4088
Hpy99I CGWCG 6 cut(s) 200, 203, 1600, 2471, 4111, 4148
HpyF10VI GCNNNNNNNGC 8 cut(s) 322, 1592, 1712, 2845, 2999, 3269, 3593, 3920
Hsp92I GRCGYC 1 cut(s) 495
Ksp22I TGATCA 2 cut(s) 100, 1213
KspAI GTTAAC 1 cut(s) 1687
LguI GCTCTTC 1 cut(s) 399
LweI GCATC 2 cut(s) 2101, 3231
MfeI CAATTG 1 cut(s) 2925
MflI RGATCY 7 cut(s) 190, 807, 829, 1414, 2221, 3659, 4011
MhlI GDGCHC 3 cut(s) 394, 2002, 3257
MlsI TGGCCA 1 cut(s) 3812
MluNI TGGCCA 1 cut(s) 3812
MlyI GAGTC 5 cut(s) 711, 987, 1322, 2762, 2863
MmeI TCCRAC 7 cut(s) 170, 679, 913, 1375, 1817, 3661, 4130
Mox20I TGGCCA 1 cut(s) 3812
MroXI GAANNNNTTC 3 cut(s) 85, 1524, 3108
MscI TGGCCA 1 cut(s) 3812
MslI CAYNNNNRTG 2 cut(s) 2399, 2603
Msp20I TGGCCA 1 cut(s) 3812
MspA1I CMGCKG 3 cut(s) 854, 3509, 3914
MspI CCGG 7 cut(s) 501, 815, 821, 2631, 3230, 3924, 4088
MspR9I CCNGG 5 cut(s) 502, 2553, 2883, 3188, 4089
MunI CAATTG 1 cut(s) 2925
Mva1269I GAATGC 1 cut(s) 2253
MvaI CCWGG 3 cut(s) 2553, 2883, 3188
MvnI CGCG 3 cut(s) 1958, 2867, 3394
MwoI GCNNNNNNNGC 8 cut(s) 322, 1592, 1712, 2845, 2999, 3269, 3593, 3920
NciI CCSGG 2 cut(s) 502, 4089
NdeI CATATG 1 cut(s) 914
NlaIV GGNNCC 5 cut(s) 819, 1270, 1399, 1648, 2223
NmuCI GTSAC 9 cut(s) 256, 374, 478, 607, 979, 1843, 2533, 2794, 4061
NspI RCATGY 2 cut(s) 1693, 2476
NspV TTCGAA 3 cut(s) 1152, 1827, 3798
PaeR7I CTCGAG 1 cut(s) 134
PagI TCATGA 3 cut(s) 705, 837, 1530
PciI ACATGT 1 cut(s) 1689
PciSI GCTCTTC 1 cut(s) 399
PcsI WCGNNNNNNNCGW 3 cut(s) 192, 365, 1158
PctI GAATGC 1 cut(s) 2253
PdmI GAANNNNTTC 3 cut(s) 85, 1524, 3108
PflMI CCANNNNNTGG 1 cut(s) 2981
PfoI TCCNGGA 1 cut(s) 500
PinAI ACCGGT 1 cut(s) 2630
PleI GAGTC 5 cut(s) 710, 986, 1322, 2761, 2862
PmaCI CACGTG 1 cut(s) 1211
PmlI CACGTG 1 cut(s) 1211
PpsI GAGTC 5 cut(s) 710, 986, 1322, 2761, 2862
Ppu21I YACGTR 1 cut(s) 1211
PscI ACATGT 1 cut(s) 1689
PshAI GACNNNNGTC 1 cut(s) 2540
PshBI ATTAAT 1 cut(s) 2151
PsiI TTATAA 1 cut(s) 3303
Psp124BI GAGCTC 3 cut(s) 394, 2002, 3257
Psp1406I AACGTT 1 cut(s) 1148
Psp6I CCWGG 3 cut(s) 2551, 2881, 3186
PspCI CACGTG 1 cut(s) 1211
PspEI GGTNACC 1 cut(s) 1843
PspFI CCCAGC 1 cut(s) 1450
PspGI CCWGG 3 cut(s) 2551, 2881, 3186
PspN4I GGNNCC 5 cut(s) 819, 1270, 1399, 1648, 2223
PspPI GGNCC 5 cut(s) 539, 1004, 1205, 1779, 3146
PstI CTGCAG 3 cut(s) 3004, 3268, 3508
PstNI CAGNNNCTG 1 cut(s) 1142
PsuI RGATCY 7 cut(s) 190, 807, 829, 1414, 2221, 3659, 4011
PvuII CAGCTG 3 cut(s) 854, 3509, 3914
RsaI GTAC 7 cut(s) 166, 1064, 1199, 1607, 3695, 4058, 4121
RsaNI GTAC 7 cut(s) 165, 1063, 1198, 1606, 3694, 4057, 4120
RseI CAYNNNNRTG 2 cut(s) 2399, 2603
SacI GAGCTC 3 cut(s) 394, 2002, 3257
SalI GTCGAC 3 cut(s) 197, 1597, 2468
SapI GCTCTTC 1 cut(s) 399
Sau96I GGNCC 5 cut(s) 539, 1004, 1205, 1779, 3146
SchI GAGTC 5 cut(s) 711, 987, 1322, 2762, 2863
ScrFI CCNGG 5 cut(s) 502, 2553, 2883, 3188, 4089
SduI GDGCHC 3 cut(s) 394, 2002, 3257
SfaNI GCATC 2 cut(s) 2101, 3231
SfcI CTRYAG 4 cut(s) 3000, 3264, 3504, 3670
Sfr274I CTCGAG 1 cut(s) 134
SfuI TTCGAA 3 cut(s) 1152, 1827, 3798
SgrDI CGTCGACG 1 cut(s) 197
SinI GGWCC 5 cut(s) 539, 1004, 1205, 1779, 3146
SlaI CTCGAG 1 cut(s) 134
SmiMI CAYNNNNRTG 2 cut(s) 2399, 2603
SmlI CTYRAG 5 cut(s) 73, 134, 2198, 2318, 3278
SmoI CTYRAG 5 cut(s) 73, 134, 2198, 2318, 3278
SspI AATATT 2 cut(s) 900, 3182
SstI GAGCTC 3 cut(s) 394, 2002, 3257
StyD4I CCNGG 5 cut(s) 500, 2551, 2881, 3186, 4087
StyI CCWWGG 3 cut(s) 1201, 1775, 2505
TaqII GACCGA 1 cut(s) 3991
TatI WGTACW 1 cut(s) 3693
TauI GCSGC 1 cut(s) 1961
TscAI CASTG 5 cut(s) 339, 2937, 3027, 3449, 4026
TseFI GTSAC 9 cut(s) 256, 374, 478, 607, 979, 1843, 2533, 2794, 4061
Tsp45I GTSAC 9 cut(s) 256, 374, 478, 607, 979, 1843, 2533, 2794, 4061
TspGWI ACGGA 4 cut(s) 1118, 1631, 2234, 3951
TspRI CASTG 5 cut(s) 339, 2937, 3027, 3449, 4026
Van91I CCANNNNNTGG 1 cut(s) 2981
VpaK11BI GGWCC 5 cut(s) 539, 1004, 1205, 1779, 3146
VspI ATTAAT 1 cut(s) 2151
XagI CCTNNNNNAGG 1 cut(s) 3719
XapI RAATTY 3 cut(s) 1364, 3815, 3981
XbaI TCTAGA 1 cut(s) 1045
XceI RCATGY 2 cut(s) 1693, 2476
XcmI CCANNNNNNNNNTGG 2 cut(s) 2232, 3194
XhoI CTCGAG 1 cut(s) 134
XmiI GTMKAC 4 cut(s) 198, 1598, 1653, 2469
XmnI GAANNNNTTC 3 cut(s) 85, 1524, 3108
ZraI GACGTC 1 cut(s) 496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.