RLG00000019862
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0002725
Physical Location & Seq
Forward (+)
57622660 .. 57632290
9631 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019862

Sequence Viewer

Length: 4476 bp
ATGGAGGGAACAGAGAGAGTAAAAGCAGGTACAAATCGAAGAAGCAGAAGCAGAACTCCGAGTTGGAGCATGGAGGAAGTGTTTGTGAGTGCCACGCACTCTCGAAGAAGCAGTAGAGCTGAAGACGAAGAGGCTCTGACTTGGGCTGCCATTGAGAAACTGCCAACATATGATAGACTAAGAACAGGGATCATCCAGTCCATTGTGGAGAGCGAGAATCCTCGAAGGAAAAACAACAAAGTGATTCACAAGGAAGTTGATGTTCTGAAGCTTGATGTAACCGACCGTCAAGATTTCATTGACAGGATTTTCAAGGATGCAGAGGAAGATAATGAGAAGTTCTTGAAGAAGTTCAGAAGCAGAATTGATAAGGTTGGGATTAGACTTCCCACAGTGGAGGTTAGGTTTGATCATTTGACGGTCGAAGCAGAATGCCATATTGGTAGCAGAGCTCTTCCCACTCTCCCAAATGTTGCTAGGAACATTGCAGAATCAGCTCTTGGTTTGATTGGGATTACAACGGCTAAGAGAACAAATCTAACCATCCTCAAGAATGCCACTGGCATTATCAAACCATCGAGGATGGCTCTATTATTAGGTCCCCCATCGTCAGGGAAAACAACCCTTTTGTTGGCACTAGCTGGGAAGTTGGATCCTAGCTTGAAGGTTAAAGGAGAGATCACATACAATGGGTATAGGTTGAACGAATTTGTACCACAGAAGACATCTGCATATATTAGCCAAAATGATGTTCATTTAGGAGAGATGACTGTCAAAGAAACCTTAGATTTTTCGGCAAGGTGCCAAGGGGTTGGTACTCGATATGAACTTCTGTCTGAGCTAGCTAGAAGGGAAAAGGAAGCTGGAATATTTCCCGAGGCAGAAGTTGACCTTTTCATGAAGGCTACTGCAATGGGAGGAGTCGAGAGCAGTCTCATTACCGACTACACTCTCAAAATTTTGGGGCTTGATATATGCAAGGATACCATTGTTGGAAACGAAATGCAGAGAGGGATTTCTGGTGGCCAAAAGAAACGAGTAACGACAGGTGAGATGATTGTGGGGCCTACAAAAACACTATTCATGGACGAAATATCAACCGGTCTAGATAGCTCCACCACATTTCAGATAGTGAAGTGCTTGCAGCAAATCGTGCACATCACTGAAGCTACGATCTTCATGTCGCTACTCCAACCTGCTCCTGAGACGTTCGATCTCTTCGATGATATCATCCTTTTATCGGAGGGTCAAATTGTCTACCAGGGACCGCGTGAGAACATTGTAGGGTTCTTTGAGAGCTGCGGATTTCGATGTCCCGAGCGAAAGGGAACTGCTGATTTCTTGCAAGAGGTTACCTCTAGAAAAGACCAAGAGCAATATTGGGCAGATAGAAGCAAGCCATACAGATACATATCAGTGACTGAATTCTCAAACCGATTTAAACGCTTCCATGTAGGCATGAGGCTTGAAAACGAGCTCTCAATCCCTTTTGATAAGTCACAAGGCCACAAAGCAGCTCTAGTATTCACAAGATATTCAGTATCCAAAATGGAACTTCTAAGGGCCTGTTGGGACAAGGAATGGCTACTCATAAAGAGGAACTCTTTTGTCTACATTTTTAAGACCGTCCAAATAATTATAGGGGCGTTGATAACCTCGACTGTGTTTTTGAACACCCAAATGCACACCAGAAATGAAGATGATGGAGCAGTATATCTTGGTGCACTATTATTTACCATGATCGTTAACACGTTCAATGGTTTTGCTGAGCTCTCGATGACCATTGCAAGACTACCTGTATTTTACAAGCATAGAGACCTTCTTTTCCACCCTGCTTGGACTTTCACTCTCCCAACTATCCTGCTCACTATTCCTATATCCATTGTTGAATCCACAGTTTGGATGGTCATAACATATTACACCATTGGTTTTGCACCTGAAGCTAGCAGGTTTTTCAAGCAACTATTGTTGATATTTCTGATCCAACAAATGGCTGCTGGGATCTTCAGGCTTATTGCTGGAGTCTGCAGGACCATGATCATAGCAAACACTGGTGGGGCTCTCACTTTGCTCATGGTTTTCATGCTTGGAGGTTTCATACTACCTAAAGGTGAAATTCCAAAGTGGTGGCAGTGGGGTTACTGGGTTTCACCTATGACCTATGGTTTCAATGCTATTGCTGTAAATGAAATGTTTTCTCCCAGGTGGATGAACAAACGGGCTTCAGATACTGTTACCAGATTGGGTGTGGCAGTGCTTCAAAACTTTGAAGTTTTCCCTGACAAAAACTGGTTTTGGATTGGCTCTGCAGCTCTTCTGGGGTTTGCAATTCTCTTCAACATCCTCTACACTGTAGCTCTCATGTACCTCAGTCCTCCTGGAAAAGCACAAGCTATTATGTCTGAAGAATTGGCCGAAGAGATGGAGGGAGACCAAGAAGAATCATGGGAAGAACCAAGACTTAGAAGGCCCAAGTCAAAGCAAGATTCATTTTCTCAGTCATTATCATCTGCTGATGCAAACAATTCAAGAGAAATGGCAATCCGGCGTATGAGCAGTCAATCCAATGCCAGTGGACTAAGTAGGAATGCTGATTCTTCCCTAGAAGTAGCCAGTGGGGTTGCGCCCAAGAGAGGAATGGTTCTTCCTTTCACTCCTCTGGCAATGTCCTTTGATGATGTTAATTACTATGTGGACATGCCTCCTGAAATGAAAGAAGAAGGAGTGACTGAGGACAGGCTGCAGCTACTTCGTGAAGTAACCGGTGCTTTTAGGCCTGGGGTCTTGACTGCTCTAATGGGGATCAGCGGGGCTGGAAAGACAACTTTGATGGATGTCTTAGCAGGAAGAAAAACTGGTGGTTACATTGAAGGCGATATTAGAATTTCCGGGTTCCCTAAGAAACAAGAAACCTTTGCAAGAATTTCTGGTTATTGTGAACAAACTGATATCCATTCACCCCAAGTCACTGTCAAAGAGTCGCTAATTTACTCAGCTTTCCTTAGGCTCCCTAAAGAAGTCAGCAAACAGGACAAGATGATTTTCGTCCAAGAGGTGATGGAATTGGTCGAGCTAGACAGTCTCAAGGATGCTCTAGTCGGGCTTCCTGGAATTACAGGGTTGTCAACCGAACAAAGAAAGAGGTTAACAATTGCAGTTGAGCTTGTTGCTAATCCCTCAATCATTTTCATGGATGAACCAACATCAGGTCTTGATGCAAGGGCAGCTGCAATTGTTATGAGGACTGTTAGAAATACGGTGGACACGGGGAGAACAGTTGTCTGCACTATTCACCAGCCTAGCATTGATATATTCGAGGCATTTGATGAGCTTCTACTCCTGAAGAGAGGGGGACAAGTTATCTACTCGGGACCATTAGGCCGCAATTCCCACAAGATCATCGAATATTTTGAGGCTATTCCTGGAGTGCAAAAAATAAAAGAAAAGTATAATCCAGCCACATGGATGCTTGAGGTAAGCTCAATAGGAACTGAGGTCAAGCTTGGAATGGACTTTGCTCAATACTACAGATCATCTTCCCTGCACCAGAGAAACAAAGCTTTAGTAAAGGAGCTAAGCAAACCACCACCGGGAGCAAAAGATCTCTATTTTGCTACTCAGTATTCACAGTCATCATTACAACAATTCAAATCATGTCTGTGGAAGCAGTGGTGGACTTATTGGAGAACTCCTGATTATAACCTTGTTAGATTCTTTTTCACATTGGCTTGTGCTCTTATGCTTGGAACTATGTTCTGGAAGGTTGGCACTAAAAGGGAAAGCACTTCTGATCTGACCATGATTATTGGGGCTATGTATTCTGCTGTGCTGTTCGTTGGAATTAACAACTGCTCCACAGTGCAGCCAATAATCGCCACTGAAAGAACGGTATTCTATCGAGAAAGAGCTGCTGGGATGTACTCTGCATTACCTTATGCACTAGCACAGGTTATTATTGAAATGCCATATGTGTTTCTTCAGACCACATATTATACGCTGATAGTGTATGCCATGGTGAGCTTTCAATGGACAGCAGCAAAATTCTTCTGGTTCTTCTTTGTCAACTTCTTCTCATTCCTTTACTTCACATACTACGGAATGATGACTGTTTCCATTACTCCAAACCACCAAGTAGCATCCATATTCGCTGCAGCTTTCTATTCACTTTTCAACCTCTTTTCCGGTTTCTTCATACCAAGACCAAAAATACCGAAATGGTGGGTTTGGTATTACTGGATATGCCCAGTAGCATGGACAGTGTATGGATTGATTGTATCACAATATGGTGATATTTTGGACACCATTAAAGCACCTGGGATGACACCTGATCCGACTGTGAAATGGTATGTAGAACACCATTTTGGATACGATCCAAACTTCATGGGACCAGTGGCTGGAGTTCTGGTTGGCTTCACACTCTTCTTTGCTTTCATGTATGCTTACTGCATAAAAACTCTCAACTTCCAAATCAGGTAG

Protein Analysis

1492

Amino Acids

168.88

Weight (kDa)

8.58

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 107 - 158 1.5e-09 ABC-transporter N-terminal
ABC_tran PF00005 183 - 364 5.8e-14 ABC transporter
ABC2_membrane PF01061 519 - 730 6.1e-54 ABC-2 type transporter
PDR_assoc PF08370 736 - 799 1.6e-25 Plant PDR ABC transporter associated
ABC_tran PF00005 918 - 1069 3.1e-19 ABC transporter
ABC2_membrane_7 PF19055 1098 - 1159 5.1e-06 ABC-2 type transporter
ABC2_membrane PF01061 1214 - 1428 7.5e-63 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3699
Acc36I ACCTGC 3 cut(s) 17, 1204, 1938
AccB1I GGYRCC 1 cut(s) 801
AccB7I CCANNNNNTGG 3 cut(s) 1899, 1990, 4394
AccI GTMKAC 2 cut(s) 1257, 1611
AccII CGCG 1 cut(s) 1270
AciI CCGC 4 cut(s) 1268, 1302, 2808, 3382
AclWI GGATC 8 cut(s) 197, 647, 660, 1975, 2009, 2810, 4322, 4364
AcoI YGGCCR 2 cut(s) 1024, 2412
AcsI RAATTY 7 cut(s) 707, 957, 1424, 2115, 2883, 2922, 4040
AcuI CTGAAG 9 cut(s) 141, 287, 1185, 1959, 1990, 2208, 2424, 3362, 3962
AfaI GTAC 5 cut(s) 31, 714, 817, 2366, 3920
AfiI CCNNNNNNNGG 9 cut(s) 611, 631, 1240, 1899, 1990, 2633, 3206, 3590, 4394
AflIII ACRYGT 1 cut(s) 1749
AgeI ACCGGT 2 cut(s) 1100, 2762
AjnI CCWGG 7 cut(s) 1260, 2201, 2377, 2776, 3106, 3421, 4312
Alw21I GWGCWC 6 cut(s) 454, 1158, 1479, 1726, 1773, 3736
Alw26I GTCTC 5 cut(s) 938, 1199, 1809, 2424, 3086
Alw44I GTGCAC 2 cut(s) 1154, 1722
AlwI GGATC 8 cut(s) 197, 647, 660, 1975, 2009, 2810, 4322, 4364
AlwNI CAGNNNCTG 3 cut(s) 1421, 2231, 4394
Ama87I CYCGRG 3 cut(s) 875, 1316, 3367
AoxI GGCC 8 cut(s) 1024, 1064, 1504, 1563, 2412, 2468, 2774, 3379
ApaLI GTGCAC 2 cut(s) 1154, 1722
ApoI RAATTY 7 cut(s) 707, 957, 1424, 2115, 2883, 2922, 4040
ArsI GACNNNNNNTTYG 2 cut(s) 1651, 1683
AsiGI ACCGGT 2 cut(s) 1100, 2762
Asp700I GAANNNNTTC 1 cut(s) 350
AspLEI GCGC 1 cut(s) 2626
AspS9I GGNCC 8 cut(s) 599, 1064, 1265, 1563, 2031, 2469, 3371, 4385
AsuC2I CCSGG 2 cut(s) 2890, 3591
AsuHPI GGTGA 8 cut(s) 1061, 2123, 2142, 2949, 3067, 3284, 4027, 4298
AsuNHI GCTAGC 2 cut(s) 841, 1943
AvaI CYCGRG 3 cut(s) 875, 1316, 3367
AvaII GGWCC 5 cut(s) 599, 1265, 2031, 3371, 4385
AxyI CCTNAGG 1 cut(s) 3002
BaeGI GKGCMC 2 cut(s) 1158, 1726
BaeI ACNNNNGTAYC 2 cut(s) 975, 1008
BalI TGGCCA 1 cut(s) 1026
BamHI GGATCC 1 cut(s) 652
BanI GGYRCC 1 cut(s) 801
BanII GRGCYC 4 cut(s) 454, 1479, 1773, 2062
BbsI GAAGAC 2 cut(s) 129, 728
Bbv12I GWGCWC 6 cut(s) 454, 1158, 1479, 1726, 1773, 3736
BccI CCATC 9 cut(s) 551, 577, 583, 613, 1697, 1897, 2416, 2824, 3052
BceAI ACGGC 1 cut(s) 537
BcgI CGANNNNNNTGC 2 cut(s) 2732, 2766
BciT130I CCWGG 7 cut(s) 1262, 2203, 2379, 2778, 3108, 3423, 4314
BciVI GTATCC 3 cut(s) 976, 1552, 4358
BclI TGATCA 2 cut(s) 409, 2037
BcnI CCSGG 2 cut(s) 2890, 3591
BcoDI GTCTC 5 cut(s) 938, 1199, 1809, 2424, 3086
BfmI CTRYAG 6 cut(s) 2026, 2307, 2352, 2741, 3526, 4149
BfuAI ACCTGC 3 cut(s) 17, 1204, 1938
BfuI GTATCC 3 cut(s) 976, 1552, 4358
BglII AGATCT 1 cut(s) 3601
BlpI GCTNAGC 2 cut(s) 1767, 3575
Bme1390I CCNGG 9 cut(s) 1262, 2203, 2379, 2778, 2890, 3108, 3423, 3591, 4314
Bme18I GGWCC 5 cut(s) 599, 1265, 2031, 3371, 4385
BmeT110I CYCGRG 3 cut(s) 875, 1316, 3367
BmgT120I GGNCC 8 cut(s) 599, 1064, 1265, 1563, 2031, 2469, 3371, 4385
BmiI GGNNCC 9 cut(s) 601, 654, 803, 1065, 1266, 2894, 3008, 3372, 4386
BmrFI CCNGG 9 cut(s) 1262, 2203, 2379, 2778, 2890, 3108, 3423, 3591, 4314
BmrI ACTGGG 2 cut(s) 2152, 4238
BmsI GCATC 6 cut(s) 307, 2506, 3079, 3205, 3456, 4145
BmtI GCTAGC 2 cut(s) 845, 1947
BmuI ACTGGG 2 cut(s) 2152, 4238
BpiI GAAGAC 2 cut(s) 129, 728
BplI GAGNNNNNCTC 6 cut(s) 571, 603, 1340, 1372, 3464, 3496
BpmI CTGGAG 3 cut(s) 2040, 3444, 4416
Bpu1102I GCTNAGC 2 cut(s) 1767, 3575
BpuEI CTTGAG 3 cut(s) 533, 3068, 3491
BpuMI CCSGG 2 cut(s) 2890, 3591
BsaBI GATNNNNATC 1 cut(s) 1411
BsaI GGTCTC 2 cut(s) 1809, 2424
BsaJI CCNNGG 7 cut(s) 805, 876, 1261, 2201, 2777, 4011, 4313
BsaWI WCCGGW 3 cut(s) 1100, 2762, 4181
BsaXI ACNNNNNCTCC 8 cut(s) 65, 95, 389, 419, 3836, 3866, 4389, 4419
Bsc4I CCNNNNNNNGG 9 cut(s) 611, 631, 1240, 1899, 1990, 2633, 3206, 3590, 4394
Bse118I RCCGGY 2 cut(s) 1100, 2762
Bse21I CCTNAGG 1 cut(s) 3002
Bse3DI GCAATG 4 cut(s) 483, 918, 1782, 2670
Bse8I GATNNNNATC 1 cut(s) 1411
BseBI CCWGG 7 cut(s) 1262, 2203, 2379, 2778, 3108, 3423, 4314
BseDI CCNNGG 7 cut(s) 805, 876, 1261, 2201, 2777, 4011, 4313
BseJI GATNNNNATC 1 cut(s) 1411
BseLI CCNNNNNNNGG 9 cut(s) 611, 631, 1240, 1899, 1990, 2633, 3206, 3590, 4394
BseMI GCAATG 4 cut(s) 483, 918, 1782, 2670
BseMII CTCAG 9 cut(s) 828, 1194, 1758, 2383, 2510, 2721, 3006, 3483, 3632
BseRI GAGGAG 2 cut(s) 933, 2646
BseSI GKGCMC 2 cut(s) 1158, 1726
BseYI CCCAGC 3 cut(s) 641, 1997, 3911
BsgI GTGCAG 3 cut(s) 3268, 3527, 3881
Bsh1236I CGCG 1 cut(s) 1270
Bsh1285I CGRYCG 2 cut(s) 286, 423
BshFI GGCC 8 cut(s) 1026, 1066, 1506, 1565, 2414, 2470, 2776, 3381
BshNI GGYRCC 1 cut(s) 801
BshTI ACCGGT 2 cut(s) 1100, 2762
BsiEI CGRYCG 2 cut(s) 286, 423
BsiHKAI GWGCWC 6 cut(s) 454, 1158, 1479, 1726, 1773, 3736
BsiHKCI CYCGRG 3 cut(s) 875, 1316, 3367
BsiSI CCGG 6 cut(s) 1101, 2545, 2763, 2889, 3590, 4182
BslFI GGGAC 7 cut(s) 585, 1278, 1299, 1586, 3366, 3384, 4398
BslI CCNNNNNNNGG 9 cut(s) 611, 631, 1240, 1899, 1990, 2633, 3206, 3590, 4394
BsmAI GTCTC 5 cut(s) 938, 1199, 1809, 2424, 3086
BsmBI CGTCTC 1 cut(s) 1199
BsmFI GGGAC 7 cut(s) 585, 1278, 1299, 1586, 3366, 3384, 4398
BsmI GAATGC 3 cut(s) 437, 559, 2593
BsnI GGCC 8 cut(s) 1026, 1066, 1506, 1565, 2414, 2470, 2776, 3381
Bso31I GGTCTC 2 cut(s) 1809, 2424
BsoBI CYCGRG 3 cut(s) 875, 1316, 3367
Bsp1286I GDGCHC 7 cut(s) 454, 1158, 1479, 1726, 1773, 2062, 3736
Bsp1720I GCTNAGC 2 cut(s) 1767, 3575
Bsp19I CCATGG 1 cut(s) 4011
BspACI CCGC 4 cut(s) 1268, 1302, 2808, 3382
BspANI GGCC 8 cut(s) 1026, 1066, 1506, 1565, 2414, 2470, 2776, 3381
BspCNI CTCAG 9 cut(s) 829, 1195, 1759, 2382, 2509, 2722, 3005, 3484, 3631
BspFNI CGCG 1 cut(s) 1270
BspHI TCATGA 1 cut(s) 897
BspLI GGNNCC 9 cut(s) 601, 654, 803, 1065, 1266, 2894, 3008, 3372, 4386
BspMAI CTGCAG 4 cut(s) 2030, 2311, 2745, 4153
BspMI ACCTGC 3 cut(s) 17, 1204, 1938
BspOI GCTAGC 2 cut(s) 845, 1947
BspPI GGATC 8 cut(s) 197, 647, 660, 1975, 2009, 2810, 4322, 4364
BspQI GCTCTTC 2 cut(s) 459, 2319
BspT107I GGYRCC 1 cut(s) 801
BspTNI GGTCTC 2 cut(s) 1809, 2424
BsrDI GCAATG 4 cut(s) 483, 918, 1782, 2670
BsrFI RCCGGY 2 cut(s) 1100, 2762
BssAI RCCGGY 2 cut(s) 1100, 2762
BssECI CCNNGG 7 cut(s) 805, 876, 1261, 2201, 2777, 4011, 4313
BssT1I CCWWGG 2 cut(s) 805, 4011
Bst2UI CCWGG 7 cut(s) 1262, 2203, 2379, 2778, 3108, 3423, 4314
Bst6I CTCTTC 8 cut(s) 123, 459, 1223, 2319, 2339, 2412, 3338, 4424
BstAPI GCANNNNNTGC 1 cut(s) 1153
BstC8I GCNNGC 4 cut(s) 843, 1142, 1397, 1945
BstDSI CCRYGG 1 cut(s) 4011
BstEII GGTNACC 1 cut(s) 1351
BstFNI CGCG 1 cut(s) 1270
BstHHI GCGC 1 cut(s) 2626
BstMAI GTCTC 5 cut(s) 938, 1199, 1809, 2424, 3086
BstMCI CGRYCG 2 cut(s) 286, 423
BstMWI GCNNNNNNNGC 4 cut(s) 494, 1153, 1940, 3224
BstNI CCWGG 7 cut(s) 1262, 2203, 2379, 2778, 3108, 3423, 4314
BstNSI RCATGY 1 cut(s) 2701
BstPI GGTNACC 1 cut(s) 1351
BstSCI CCNGG 9 cut(s) 1260, 2201, 2377, 2776, 2888, 3106, 3421, 3589, 4312
BstSFI CTRYAG 6 cut(s) 2026, 2307, 2352, 2741, 3526, 4149
BstSLI GKGCMC 2 cut(s) 1158, 1726
BstUI CGCG 1 cut(s) 1270
BstV2I GAAGAC 2 cut(s) 129, 728
BstX2I RGATCY 3 cut(s) 652, 2001, 3601
BstXI CCANNNNNNTGG 4 cut(s) 812, 2127, 3462, 4251
BstYI RGATCY 3 cut(s) 652, 2001, 3601
Bsu36I CCTNAGG 1 cut(s) 3002
BsuI GTATCC 3 cut(s) 976, 1552, 4358
BsuRI GGCC 8 cut(s) 1026, 1066, 1506, 1565, 2414, 2470, 2776, 3381
BtgI CCRYGG 1 cut(s) 4011
BtsI GCAGTG 3 cut(s) 2138, 2259, 3674
BveI ACCTGC 3 cut(s) 17, 1204, 1938
Cac8I GCNNGC 4 cut(s) 843, 1142, 1397, 1945
CaiI CAGNNNCTG 3 cut(s) 1421, 2231, 4394
CciI TCATGA 1 cut(s) 897
CfoI GCGC 1 cut(s) 2626
Cfr10I RCCGGY 2 cut(s) 1100, 2762
Cfr13I GGNCC 8 cut(s) 599, 1064, 1265, 1563, 2031, 2469, 3371, 4385
Csp6I GTAC 5 cut(s) 30, 713, 816, 2365, 3919
CspAI ACCGGT 2 cut(s) 1100, 2762
CspCI CAANNNNNGTGG 4 cut(s) 1817, 1852, 2554, 2589
CviQI GTAC 5 cut(s) 30, 713, 816, 2365, 3919
DraI TTTAAA 1 cut(s) 1441
EaeI YGGCCR 2 cut(s) 1024, 2412
Eam1104I CTCTTC 8 cut(s) 123, 459, 1223, 2319, 2339, 2412, 3338, 4424
EarI CTCTTC 8 cut(s) 123, 459, 1223, 2319, 2339, 2412, 3338, 4424
Ecl136II GAGCTC 3 cut(s) 452, 1477, 1771
Eco130I CCWWGG 2 cut(s) 805, 4011
Eco147I AGGCCT 1 cut(s) 2776
Eco24I GRGCYC 4 cut(s) 454, 1479, 1773, 2062
Eco31I GGTCTC 2 cut(s) 1809, 2424
Eco32I GATATC 2 cut(s) 1228, 2950
Eco47I GGWCC 5 cut(s) 599, 1265, 2031, 3371, 4385
Eco53kI GAGCTC 3 cut(s) 452, 1477, 1771
Eco57I CTGAAG 9 cut(s) 141, 287, 1185, 1959, 1990, 2208, 2424, 3362, 3962
Eco81I CCTNAGG 1 cut(s) 3002
Eco88I CYCGRG 3 cut(s) 875, 1316, 3367
Eco91I GGTNACC 1 cut(s) 1351
EcoICRI GAGCTC 3 cut(s) 452, 1477, 1771
EcoO109I RGGNCCY 3 cut(s) 599, 1064, 1563
EcoO65I GGTNACC 1 cut(s) 1351
EcoRI GAATTC 1 cut(s) 1424
EcoRII CCWGG 7 cut(s) 1260, 2201, 2377, 2776, 3106, 3421, 4312
EcoRV GATATC 2 cut(s) 1228, 2950
EcoT14I CCWWGG 2 cut(s) 805, 4011
EcoT38I GRGCYC 4 cut(s) 454, 1479, 1773, 2062
ErhI CCWWGG 2 cut(s) 805, 4011
Esp3I CGTCTC 1 cut(s) 1199
FalI AAGNNNNNCTT 2 cut(s) 876, 908
FaqI GGGAC 7 cut(s) 585, 1278, 1299, 1586, 3366, 3384, 4398
FauI CCCGC 1 cut(s) 2801
FauNDI CATATG 2 cut(s) 169, 3967
FbaI TGATCA 2 cut(s) 409, 2037
FblI GTMKAC 2 cut(s) 1257, 1611
FriOI GRGCYC 4 cut(s) 454, 1479, 1773, 2062
GlaI GCGC 1 cut(s) 2625
GsaI CCCAGC 3 cut(s) 645, 2001, 3915
GsuI CTGGAG 3 cut(s) 2040, 3444, 4416
HaeIII GGCC 8 cut(s) 1026, 1066, 1506, 1565, 2414, 2470, 2776, 3381
HapII CCGG 6 cut(s) 1101, 2545, 2763, 2889, 3590, 4182
HhaI GCGC 1 cut(s) 2626
Hin6I GCGC 1 cut(s) 2624
HinP1I GCGC 1 cut(s) 2624
HincII GTYRAC 5 cut(s) 889, 1747, 3126, 3147, 4063
HindII GTYRAC 5 cut(s) 889, 1747, 3126, 3147, 4063
HindIII AAGCTT 3 cut(s) 269, 3500, 3558
HpaI GTTAAC 2 cut(s) 1747, 3147
HpaII CCGG 6 cut(s) 1101, 2545, 2763, 2889, 3590, 4182
HphI GGTGA 8 cut(s) 1061, 2123, 2142, 2949, 3067, 3284, 4027, 4298
HpyAV CCTTC 9 cut(s) 219, 658, 843, 895, 1829, 2460, 2714, 2864, 3754
HpyCH4IV ACGT 2 cut(s) 1208, 1751
HpyF10VI GCNNNNNNNGC 4 cut(s) 494, 1153, 1940, 3224
HpySE526I ACGT 2 cut(s) 1208, 1751
HspAI GCGC 1 cut(s) 2624
Ksp22I TGATCA 2 cut(s) 409, 2037
KspAI GTTAAC 2 cut(s) 1747, 3147
LguI GCTCTTC 2 cut(s) 459, 2319
LmnI GCTCC 8 cut(s) 66, 1118, 1204, 1706, 3012, 3571, 3593, 3857
LweI GCATC 6 cut(s) 307, 2506, 3079, 3205, 3456, 4145
MaeII ACGT 2 cut(s) 1208, 1751
MfeI CAATTG 2 cut(s) 3150, 3231
MflI RGATCY 3 cut(s) 652, 2001, 3601
MhlI GDGCHC 7 cut(s) 454, 1158, 1479, 1726, 1773, 2062, 3736
MlsI TGGCCA 1 cut(s) 1026
MluNI TGGCCA 1 cut(s) 1026
MlyI GAGTC 3 cut(s) 930, 2031, 2987
MmeI TCCRAC 7 cut(s) 44, 630, 973, 1216, 2008, 3817, 4355
Mox20I TGGCCA 1 cut(s) 1026
MroXI GAANNNNTTC 1 cut(s) 350
MscI TGGCCA 1 cut(s) 1026
MseI TTAA 8 cut(s) 669, 1440, 1620, 1746, 2682, 3146, 3843, 4305
MslI CAYNNNNRTG 5 cut(s) 1415, 1679, 3188, 3464, 3658
Msp20I TGGCCA 1 cut(s) 1026
MspA1I CMGCKG 2 cut(s) 2808, 3227
MspI CCGG 6 cut(s) 1101, 2545, 2763, 2889, 3590, 4182
MspR9I CCNGG 9 cut(s) 1262, 2203, 2379, 2778, 2890, 3108, 3423, 3591, 4314
MunI CAATTG 2 cut(s) 3150, 3231
Mva1269I GAATGC 3 cut(s) 437, 559, 2593
MvaI CCWGG 7 cut(s) 1262, 2203, 2379, 2778, 3108, 3423, 4314
MvnI CGCG 1 cut(s) 1270
MwoI GCNNNNNNNGC 4 cut(s) 494, 1153, 1940, 3224
NciI CCSGG 2 cut(s) 2890, 3591
NcoI CCATGG 1 cut(s) 4011
NdeI CATATG 2 cut(s) 169, 3967
NheI GCTAGC 2 cut(s) 841, 1943
NlaIV GGNNCC 9 cut(s) 601, 654, 803, 1065, 1266, 2894, 3008, 3372, 4386
NmuCI GTSAC 4 cut(s) 1417, 1497, 2725, 2965
NspI RCATGY 1 cut(s) 2701
PagI TCATGA 1 cut(s) 897
PceI AGGCCT 1 cut(s) 2776
PciSI GCTCTTC 2 cut(s) 459, 2319
PcsI WCGNNNNNNNCGW 1 cut(s) 1218
PctI GAATGC 3 cut(s) 437, 559, 2593
PdmI GAANNNNTTC 1 cut(s) 350
PfeI GAWTC 8 cut(s) 217, 244, 491, 1889, 2441, 2486, 2594, 3711
PflMI CCANNNNNTGG 3 cut(s) 1899, 1990, 4394
PfoI TCCNGGA 3 cut(s) 2377, 3106, 3421
PinAI ACCGGT 2 cut(s) 1100, 2762
PleI GAGTC 3 cut(s) 929, 2030, 2986
PpsI GAGTC 3 cut(s) 929, 2030, 2986
PpuMI RGGWCCY 1 cut(s) 599
PsiI TTATAA 1 cut(s) 3699
Psp124BI GAGCTC 3 cut(s) 454, 1479, 1773
Psp5II RGGWCCY 1 cut(s) 599
Psp6I CCWGG 7 cut(s) 1260, 2201, 2377, 2776, 3106, 3421, 4312
PspEI GGTNACC 1 cut(s) 1351
PspFI CCCAGC 3 cut(s) 641, 1997, 3911
PspGI CCWGG 7 cut(s) 1260, 2201, 2377, 2776, 3106, 3421, 4312
PspN4I GGNNCC 9 cut(s) 601, 654, 803, 1065, 1266, 2894, 3008, 3372, 4386
PspPI GGNCC 8 cut(s) 599, 1064, 1265, 1563, 2031, 2469, 3371, 4385
PspPPI RGGWCCY 1 cut(s) 599
PstI CTGCAG 4 cut(s) 2030, 2311, 2745, 4153
PstNI CAGNNNCTG 3 cut(s) 1421, 2231, 4394
PsuI RGATCY 3 cut(s) 652, 2001, 3601
PvuII CAGCTG 1 cut(s) 3227
RsaI GTAC 5 cut(s) 31, 714, 817, 2366, 3920
RsaNI GTAC 5 cut(s) 30, 713, 816, 2365, 3919
RseI CAYNNNNRTG 5 cut(s) 1415, 1679, 3188, 3464, 3658
SacI GAGCTC 3 cut(s) 454, 1479, 1773
SapI GCTCTTC 2 cut(s) 459, 2319
SaqAI TTAA 8 cut(s) 669, 1440, 1620, 1746, 2682, 3146, 3843, 4305
Sau96I GGNCC 8 cut(s) 599, 1064, 1265, 1563, 2031, 2469, 3371, 4385
SchI GAGTC 3 cut(s) 930, 2031, 2987
ScrFI CCNGG 9 cut(s) 1262, 2203, 2379, 2778, 2890, 3108, 3423, 3591, 4314
SduI GDGCHC 7 cut(s) 454, 1158, 1479, 1726, 1773, 2062, 3736
SfaNI GCATC 6 cut(s) 307, 2506, 3079, 3205, 3456, 4145
SfcI CTRYAG 6 cut(s) 2026, 2307, 2352, 2741, 3526, 4149
SinI GGWCC 5 cut(s) 599, 1265, 2031, 3371, 4385
SmiMI CAYNNNNRTG 5 cut(s) 1415, 1679, 3188, 3464, 3658
SmlI CTYRAG 3 cut(s) 548, 3083, 3470
SmoI CTYRAG 3 cut(s) 548, 3083, 3470
SseBI AGGCCT 1 cut(s) 2776
SsiI CCGC 4 cut(s) 1268, 1302, 2808, 3382
SspI AATATT 3 cut(s) 870, 1379, 3407
SstI GAGCTC 3 cut(s) 454, 1479, 1773
StuI AGGCCT 1 cut(s) 2776
StyD4I CCNGG 9 cut(s) 1260, 2201, 2377, 2776, 2888, 3106, 3421, 3589, 4312
StyI CCWWGG 2 cut(s) 805, 4011
TaiI ACGT 2 cut(s) 1211, 1754
TatI WGTACW 1 cut(s) 3918
TauI GCSGC 1 cut(s) 3384
TfiI GAWTC 8 cut(s) 217, 244, 491, 1889, 2441, 2486, 2594, 3711
Tru1I TTAA 8 cut(s) 669, 1440, 1620, 1746, 2682, 3146, 3843, 4305
Tru9I TTAA 8 cut(s) 669, 1440, 1620, 1746, 2682, 3146, 3843, 4305
TseFI GTSAC 4 cut(s) 1417, 1497, 2725, 2965
Tsp45I GTSAC 4 cut(s) 1417, 1497, 2725, 2965
TspGWI ACGGA 1 cut(s) 4110
Van91I CCANNNNNTGG 3 cut(s) 1899, 1990, 4394
VneI GTGCAC 2 cut(s) 1154, 1722
VpaK11BI GGWCC 5 cut(s) 599, 1265, 2031, 3371, 4385
XapI RAATTY 7 cut(s) 707, 957, 1424, 2115, 2883, 2922, 4040
XbaI TCTAGA 2 cut(s) 1105, 1358
XceI RCATGY 1 cut(s) 2701
XcmI CCANNNNNNNNNTGG 3 cut(s) 1900, 2245, 2635
XmiI GTMKAC 2 cut(s) 1257, 1611
XmnI GAANNNNTTC 1 cut(s) 350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.