Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008211.1

Orthogroup ID

OG0002725

Physical Location & Seq

Genomic Coordinates Reverse (-)

8106 .. 15187

Gene Structure 7082 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008211.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3528 bp

atggaacagattttggggcttgatatatgcaaggataccattgttggaaacgaaatgcagagagggatttctggtggccaaaagaaacgagtaacgacaggtgagatgattgtggggcctacaaaagcactattcatggacgaaatatcaaccggtctagatagctccaccacatttcaaatagtgaagtgcttgcagcaaatcgtgcacatcactgaagctacgatcttcatgtcgctactccaacctgctcctgagacgtttgatctcttcgatgatatcatccttttatcggagggtcaaattgtctaccagggaccgcgtgagaacatagtagggttctttgagagctgcggatttcgatgccccgagcgaaagggaactgctgatttcttgcaagaggttacctctagaaaagaccaagagcaatattgggcagatagaagcaagccatacagatacatatcagtgactgaattctcaaaccgatttaaacgcttccatgttggcatgaggcttgaaaacgagctctcaatcccttttgataagtcacgaggccacaaagcagctctagtattcacaagatattcagtatccaaaatggaacttctaaaggcctgttgggacaaggaatggctactcataaagaggaactcttttgtctacatttttaagaccgtccaaataattataggggcgttgataacctcgactgtgtttttgaagacccaaatgcacaccagaaatgaagatgatggagcagtatatcttggtgcactattatttaccatgatcattaacacgttcaatggttttgctgagctctcgatgaccattgcaagactacctgtattttacaagcatagagaccttcttttccaccctgcttggactttcactctcccaactatcctgctcactattcctatatccattgttgaatccacagtttggatggtcataacatattacaccattggttttgcacctgaagctagcaggtttttcaagcaactattgctgatatttctgatccaacaaatggctgctgggatcttcaggcttattgctggagtctgcaggaccatgatcatagcaaacactggtggggctctcactttgctcatggttttcatgcttggaggtttcatactacctaaaggcgaaattccaaagtggtggcagtggggttactgggtttcacctatgacctatggtttcaatgctattgctgtaaatgaaatgttttctcccaggtggatgaacaaatgggcttcagataacgataccagattgggtgtggcagtgcttcaaaacttcgaagttttccctgacaaaaactggttttggattggctctgcagctcttctggggtttgcaattctcttcaacatcctctacactatagctctcatgtacctcagtcctcctggaaaagcacaagctattatatctgaagaattggccgaagagatggagggagaccaagaagaatccagggaagaaccaagacttagaaggcccaagtcaaagcaagattcattttctcagtcattatcatctgctgatgcaaacaattcaagagaaatggcaatccggcgtatgagcagtcaatccaataccagtggactaagtaggaatgctgattcttccctagaagtagccagtggggttgcgcccaagagaggaatggttcttcctttcactcctctggcaatgtcctttgatgatgttaattactatgtggacatgcctcctgaaatgaaagaagaaggagtgagtgaggacaggctgcagctacttcgtgaagtaaccggtgcttttaggcctggggtcttgactgctctaatggggatcagcggggctggaaagacaactttgatggatgtcttagcaggaagaaagactggtggttacattgaaggcgatattagaatttccgggttccctaagaaacaagaaacctttgcaagaatttctggttattgtgaacaaactgatatccactcaccccaagtcactgtcaaagagtcgctaatttactcagctttccttaggctccctaaagaagtcagcaaacaggacaagatgattttcgtccaagaggtgatggaattggtcgagctagacagtctcaaggatgctctggtcgggcttcctggaattacagggttgtcaaccgaacaaagaaagaggttaacaattgcagttgagcttgttgctaatccctcaatcattttcatggatgaaccaacatcaggtcttgatgcaagggcagctgcaattgttatgaggactgttagaaatacggtggacactgggagaacagttgtctgcactattcaccagcctagcattgatatattcgaggcatttgatgagcttctactcctgaagagaggaggacaagttatctactcgggaccattaggccgcaattcccacaagatcatcgaatattttgaggctattcctggagtgcaaaaaataaaagaaaagtataatccagccacatggatgcttgaggtaagctcagtaggaactgaggtcaagcttggaatggactttgctcaatactacagatcatcttccttgcaccagagaaacaaagctttagtaaaggagctaagcaaaccatctccaggagcaaaagatctctattttgctactcagtattcacagtcatcattacaacaattcaaatcatgtctgtggaagcagtggtggacttattggagaactcctgattataaccttgttagattctttttcaccttggcttgtgctctcatgcttggaactatgttctggaaggttggcactaaaagggaaagcacttctgatctgaccatgattattggggctatgtattctgctgtgctgttcgttggaattaacaactgctccacagtgcagccaataatcgccactgaaagaacggtattctatcgagaaagagctgctgggatgtactctgcattaccttatgcactagcacaggttattattgaaatgccatatgtgtttcttcagaccacatattatacgctgatagtgtatgccatggtgagctttcaatggacagcagcaaaattcttctggttcttctttgtcaacttcttctcattcctttacttcacatactacggaatgatgactgtttccattactccaaaccaccaagtagcatccatattcgctgcagctttctattcacttttcaacctcttttccggtttcttcataccaagaccaaaaataccgaaatggtgggtttggtattactggatatgcccagtagcatggacagtgtatggattgattgtatcacaatatggtgatattttggacaccattaaagcacctgggatgacacctgatccgactgtgaaatggtatgtagaacaccattttggatacgatccaaacttcatgggaccagtggctggagttctggttggcttcacactcttctttgctttcatgtatgcttactgcataaaaactctcaacttccaaatcaggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1175

Amino Acids

133.57

Weight (kDa)

8.29

Isoelectric Point (pI)

39.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15210 AT1G59870 AT3G16340 AT3G16340
fragaria_vesca	FvH4_6g32310 FvH4_6g32310
malus_domestica	MD09G1203500.v1.1 MD09G1204000.v1.1 MD09G1204200.v1.1 MD09G1204300.v1.1 MD17G1184700.v1.1
prunus_persica	Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059900_v2.0.a1 Prupe.3G060000_v2.0.a1 Prupe.3G060000_v2.0.a1
pyrus_communis	pycom09g12060 pycom09g12080 pycom09g12130 pycom17g19420
rosa_chinensis	RchiOBHm_Chr2g0140401
rosa_laevigata	RLG00000019862
rosa_multiflora	Rmu_sc0008211.1_g000001 Rmu_sc0010411.1_g000005 Rmu_sc0019541.1_g000001 Rmu_sc0019542.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104910
rosa_rugosa	Rorug02G0361800 Rorug02G0361900 Rorug02G0362000 Rorug02G0362100 Rorug02G0362100
rosa_samantha	Rh2AG413100 Rh2BG423600 Rh2CG399300 Rh2DG432500
rosa_wichuraiana	Rw2G033870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2751
Acc36I	ACCTGC	2 cut(s)	256, 990
AccB7I	CCANNNNNTGG	3 cut(s)	951, 1042, 3446
AccI	GTMKAC	2 cut(s)	309, 663
AccII	CGCG	1 cut(s)	322
AciI	CCGC	4 cut(s)	320, 354, 1860, 2434
AclWI	GGATC	5 cut(s)	1027, 1061, 1862, 3374, 3416
AcoI	YGGCCR	2 cut(s)	76, 1464
AcsI	RAATTY	5 cut(s)	476, 1167, 1935, 1974, 3092
AcuI	CTGAAG	7 cut(s)	237, 1011, 1042, 1260, 1476, 2414, 3014
AfaI	GTAC	2 cut(s)	1418, 2972
AfiI	CCNNNNNNNGG	7 cut(s)	292, 951, 1042, 1685, 2258, 2642, 3446
AflIII	ACRYGT	1 cut(s)	801
AgeI	ACCGGT	2 cut(s)	152, 1814
AjnI	CCWGG	9 cut(s)	312, 1253, 1429, 1496, 1828, 2158, 2473, 2641, 3364
AjuI	GAANNNNNNNTTGG	2 cut(s)	3396, 3428
Alw21I	GWGCWC	5 cut(s)	210, 531, 778, 825, 2788
Alw26I	GTCTC	4 cut(s)	251, 861, 1476, 2138
Alw44I	GTGCAC	2 cut(s)	206, 774
AlwI	GGATC	5 cut(s)	1027, 1061, 1862, 3374, 3416
AlwNI	CAGNNNCTG	2 cut(s)	473, 3446
Ama87I	CYCGRG	2 cut(s)	368, 2419
AoxI	GGCC	8 cut(s)	76, 116, 556, 615, 1464, 1520, 1826, 2431
ApaLI	GTGCAC	2 cut(s)	206, 774
ApoI	RAATTY	5 cut(s)	476, 1167, 1935, 1974, 3092
ArsI	GACNNNNNNTTYG	2 cut(s)	703, 735
AsiGI	ACCGGT	2 cut(s)	152, 1814
AspLEI	GCGC	1 cut(s)	1678
AspS9I	GGNCC	6 cut(s)	116, 317, 1083, 1521, 2423, 3437
AsuC2I	CCSGG	1 cut(s)	1942
AsuHPI	GGTGA	8 cut(s)	113, 1194, 2001, 2119, 2336, 2764, 3079, 3350
AsuII	TTCGAA	1 cut(s)	1320
AsuNHI	GCTAGC	1 cut(s)	995
AvaI	CYCGRG	2 cut(s)	368, 2419
AvaII	GGWCC	4 cut(s)	317, 1083, 2423, 3437
AxyI	CCTNAGG	1 cut(s)	2054
BaeGI	GKGCMC	2 cut(s)	210, 778
BaeI	ACNNNNGTAYC	2 cut(s)	27, 60
BalI	TGGCCA	1 cut(s)	78
BanII	GRGCYC	3 cut(s)	531, 825, 1114
BauI	CACGAG	1 cut(s)	552
BbsI	GAAGAC	1 cut(s)	731
Bbv12I	GWGCWC	5 cut(s)	210, 531, 778, 825, 2788
BccI	CCATC	6 cut(s)	749, 949, 1468, 1876, 2104, 2644
BcgI	CGANNNNNNTGC	2 cut(s)	1784, 1818
BciT130I	CCWGG	9 cut(s)	314, 1255, 1431, 1498, 1830, 2160, 2475, 2643, 3366
BciVI	GTATCC	3 cut(s)	28, 604, 3410
BclI	TGATCA	2 cut(s)	792, 1089
BcnI	CCSGG	1 cut(s)	1942
BcoDI	GTCTC	4 cut(s)	251, 861, 1476, 2138
BfaI	CTAG	8 cut(s)	158, 411, 572, 996, 1655, 2126, 2352, 2993
BfmI	CTRYAG	6 cut(s)	1078, 1359, 1404, 1793, 2578, 3201
BfuAI	ACCTGC	2 cut(s)	256, 990
BfuI	GTATCC	3 cut(s)	28, 604, 3410
BglII	AGATCT	1 cut(s)	2653
BlpI	GCTNAGC	2 cut(s)	819, 2627
Bme18I	GGWCC	4 cut(s)	317, 1083, 2423, 3437
BmeT110I	CYCGRG	2 cut(s)	368, 2419
BmgT120I	GGNCC	6 cut(s)	116, 317, 1083, 1521, 2423, 3437
BmiI	GGNNCC	6 cut(s)	117, 318, 1946, 2060, 2424, 3438
BmrI	ACTGGG	3 cut(s)	1204, 2328, 3290
BmsI	GCATC	6 cut(s)	353, 1558, 2131, 2257, 2508, 3197
BmtI	GCTAGC	1 cut(s)	999
BmuI	ACTGGG	3 cut(s)	1204, 2328, 3290
BpiI	GAAGAC	1 cut(s)	731
BplI	GAGNNNNNCTC	4 cut(s)	392, 424, 2516, 2548
BpmI	CTGGAG	4 cut(s)	1092, 2496, 2625, 3468
Bpu1102I	GCTNAGC	2 cut(s)	819, 2627
Bpu14I	TTCGAA	1 cut(s)	1320
BpuEI	CTTGAG	2 cut(s)	2120, 2543
BpuMI	CCSGG	1 cut(s)	1942
BsaBI	GATNNNNATC	1 cut(s)	463
BsaI	GGTCTC	2 cut(s)	861, 1476
BsaJI	CCNNGG	7 cut(s)	313, 1253, 1497, 1829, 2775, 3063, 3365
BsaWI	WCCGGW	3 cut(s)	152, 1814, 3233
BsaXI	ACNNNNNCTCC	6 cut(s)	2394, 2424, 2888, 2918, 3441, 3471
Bsc4I	CCNNNNNNNGG	7 cut(s)	292, 951, 1042, 1685, 2258, 2642, 3446
Bse118I	RCCGGY	2 cut(s)	152, 1814
Bse21I	CCTNAGG	1 cut(s)	2054
Bse3DI	GCAATG	2 cut(s)	834, 1722
Bse8I	GATNNNNATC	1 cut(s)	463
BseBI	CCWGG	9 cut(s)	314, 1255, 1431, 1498, 1830, 2160, 2475, 2643, 3366
BseDI	CCNNGG	7 cut(s)	313, 1253, 1497, 1829, 2775, 3063, 3365
BseJI	GATNNNNATC	1 cut(s)	463
BseLI	CCNNNNNNNGG	7 cut(s)	292, 951, 1042, 1685, 2258, 2642, 3446
BseMI	GCAATG	2 cut(s)	834, 1722
BseMII	CTCAG	8 cut(s)	246, 810, 1435, 1562, 2058, 2535, 2547, 2684
BseRI	GAGGAG	2 cut(s)	1698, 2415
BseSI	GKGCMC	2 cut(s)	210, 778
BseYI	CCCAGC	2 cut(s)	1049, 2963
BsgI	GTGCAG	2 cut(s)	2320, 2933
Bsh1236I	CGCG	1 cut(s)	322
BshFI	GGCC	8 cut(s)	78, 118, 558, 617, 1466, 1522, 1828, 2433
BshTI	ACCGGT	2 cut(s)	152, 1814
BsiHKAI	GWGCWC	5 cut(s)	210, 531, 778, 825, 2788
BsiHKCI	CYCGRG	2 cut(s)	368, 2419
BsiSI	CCGG	5 cut(s)	153, 1597, 1815, 1941, 3234
BslFI	GGGAC	4 cut(s)	330, 638, 2436, 3450
BslI	CCNNNNNNNGG	7 cut(s)	292, 951, 1042, 1685, 2258, 2642, 3446
BsmAI	GTCTC	4 cut(s)	251, 861, 1476, 2138
BsmBI	CGTCTC	1 cut(s)	251
BsmFI	GGGAC	4 cut(s)	330, 638, 2436, 3450
BsmI	GAATGC	1 cut(s)	1645
BsnI	GGCC	8 cut(s)	78, 118, 558, 617, 1466, 1522, 1828, 2433
Bso31I	GGTCTC	2 cut(s)	861, 1476
BsoBI	CYCGRG	2 cut(s)	368, 2419
Bsp119I	TTCGAA	1 cut(s)	1320
Bsp1286I	GDGCHC	6 cut(s)	210, 531, 778, 825, 1114, 2788
Bsp1720I	GCTNAGC	2 cut(s)	819, 2627
Bsp19I	CCATGG	1 cut(s)	3063
BspACI	CCGC	4 cut(s)	320, 354, 1860, 2434
BspANI	GGCC	8 cut(s)	78, 118, 558, 617, 1466, 1522, 1828, 2433
BspCNI	CTCAG	8 cut(s)	247, 811, 1434, 1561, 2057, 2536, 2546, 2683
BspFNI	CGCG	1 cut(s)	322
BspLI	GGNNCC	6 cut(s)	117, 318, 1946, 2060, 2424, 3438
BspMAI	CTGCAG	4 cut(s)	1082, 1363, 1797, 3205
BspMI	ACCTGC	2 cut(s)	256, 990
BspOI	GCTAGC	1 cut(s)	999
BspPI	GGATC	5 cut(s)	1027, 1061, 1862, 3374, 3416
BspQI	GCTCTTC	1 cut(s)	1371
BspT104I	TTCGAA	1 cut(s)	1320
BspTNI	GGTCTC	2 cut(s)	861, 1476
BsrDI	GCAATG	2 cut(s)	834, 1722
BsrFI	RCCGGY	2 cut(s)	152, 1814
BssAI	RCCGGY	2 cut(s)	152, 1814
BssECI	CCNNGG	7 cut(s)	313, 1253, 1497, 1829, 2775, 3063, 3365
BssSI	CACGAG	1 cut(s)	552
BssT1I	CCWWGG	2 cut(s)	2775, 3063
Bst2BI	CACGAG	1 cut(s)	552
Bst2UI	CCWGG	9 cut(s)	314, 1255, 1431, 1498, 1830, 2160, 2475, 2643, 3366
Bst6I	CTCTTC	6 cut(s)	275, 1371, 1391, 1464, 2390, 3476
BstAPI	GCANNNNNTGC	2 cut(s)	205, 1018
BstBI	TTCGAA	1 cut(s)	1320
BstC8I	GCNNGC	3 cut(s)	194, 449, 997
BstDSI	CCRYGG	1 cut(s)	3063
BstEII	GGTNACC	1 cut(s)	403
BstFNI	CGCG	1 cut(s)	322
BstHHI	GCGC	1 cut(s)	1678
BstMAI	GTCTC	4 cut(s)	251, 861, 1476, 2138
BstMWI	GCNNNNNNNGC	4 cut(s)	205, 992, 1018, 2276
BstNI	CCWGG	9 cut(s)	314, 1255, 1431, 1498, 1830, 2160, 2475, 2643, 3366
BstNSI	RCATGY	1 cut(s)	1753
BstPI	GGTNACC	1 cut(s)	403
BstSFI	CTRYAG	6 cut(s)	1078, 1359, 1404, 1793, 2578, 3201
BstSLI	GKGCMC	2 cut(s)	210, 778
BstUI	CGCG	1 cut(s)	322
BstV2I	GAAGAC	1 cut(s)	731
BstX2I	RGATCY	2 cut(s)	1053, 2653
BstXI	CCANNNNNNTGG	3 cut(s)	1179, 2514, 3303
BstYI	RGATCY	2 cut(s)	1053, 2653
Bsu36I	CCTNAGG	1 cut(s)	2054
BsuI	GTATCC	3 cut(s)	28, 604, 3410
BsuRI	GGCC	8 cut(s)	78, 118, 558, 617, 1466, 1522, 1828, 2433
BtgI	CCRYGG	1 cut(s)	3063
BtsI	GCAGTG	3 cut(s)	1190, 1311, 2726
BveI	ACCTGC	2 cut(s)	256, 990
Cac8I	GCNNGC	3 cut(s)	194, 449, 997
CaiI	CAGNNNCTG	2 cut(s)	473, 3446
CfoI	GCGC	1 cut(s)	1678
Cfr10I	RCCGGY	2 cut(s)	152, 1814
Cfr13I	GGNCC	6 cut(s)	116, 317, 1083, 1521, 2423, 3437
Csp6I	GTAC	2 cut(s)	1417, 2971
CspAI	ACCGGT	2 cut(s)	152, 1814
CspCI	CAANNNNNGTGG	4 cut(s)	869, 904, 1606, 1641
CviQI	GTAC	2 cut(s)	1417, 2971
DraI	TTTAAA	1 cut(s)	493
EaeI	YGGCCR	2 cut(s)	76, 1464
Eam1104I	CTCTTC	6 cut(s)	275, 1371, 1391, 1464, 2390, 3476
EarI	CTCTTC	6 cut(s)	275, 1371, 1391, 1464, 2390, 3476
Ecl136II	GAGCTC	2 cut(s)	529, 823
Eco130I	CCWWGG	2 cut(s)	2775, 3063
Eco147I	AGGCCT	2 cut(s)	617, 1828
Eco24I	GRGCYC	3 cut(s)	531, 825, 1114
Eco31I	GGTCTC	2 cut(s)	861, 1476
Eco32I	GATATC	2 cut(s)	280, 2002
Eco47I	GGWCC	4 cut(s)	317, 1083, 2423, 3437
Eco53kI	GAGCTC	2 cut(s)	529, 823
Eco57I	CTGAAG	7 cut(s)	237, 1011, 1042, 1260, 1476, 2414, 3014
Eco81I	CCTNAGG	1 cut(s)	2054
Eco88I	CYCGRG	2 cut(s)	368, 2419
Eco91I	GGTNACC	1 cut(s)	403
EcoICRI	GAGCTC	2 cut(s)	529, 823
EcoO109I	RGGNCCY	1 cut(s)	116
EcoO65I	GGTNACC	1 cut(s)	403
EcoRI	GAATTC	1 cut(s)	476
EcoRII	CCWGG	9 cut(s)	312, 1253, 1429, 1496, 1828, 2158, 2473, 2641, 3364
EcoRV	GATATC	2 cut(s)	280, 2002
EcoT14I	CCWWGG	2 cut(s)	2775, 3063
EcoT38I	GRGCYC	3 cut(s)	531, 825, 1114
ErhI	CCWWGG	2 cut(s)	2775, 3063
Esp3I	CGTCTC	1 cut(s)	251
FaqI	GGGAC	4 cut(s)	330, 638, 2436, 3450
FauI	CCCGC	1 cut(s)	1853
FauNDI	CATATG	1 cut(s)	3019
FbaI	TGATCA	2 cut(s)	792, 1089
FblI	GTMKAC	2 cut(s)	309, 663
FriOI	GRGCYC	3 cut(s)	531, 825, 1114
FspBI	CTAG	8 cut(s)	158, 411, 572, 996, 1655, 2126, 2352, 2993
GlaI	GCGC	1 cut(s)	1677
GsaI	CCCAGC	2 cut(s)	1053, 2967
GsuI	CTGGAG	4 cut(s)	1092, 2496, 2625, 3468
HaeIII	GGCC	8 cut(s)	78, 118, 558, 617, 1466, 1522, 1828, 2433
HapII	CCGG	5 cut(s)	153, 1597, 1815, 1941, 3234
HhaI	GCGC	1 cut(s)	1678
Hin6I	GCGC	1 cut(s)	1676
HinP1I	GCGC	1 cut(s)	1676
HincII	GTYRAC	3 cut(s)	2178, 2199, 3115
HindII	GTYRAC	3 cut(s)	2178, 2199, 3115
HindIII	AAGCTT	2 cut(s)	2552, 2610
HinfI	GANTC	7 cut(s)	941, 1074, 1493, 1538, 1646, 2030, 2763
HpaI	GTTAAC	1 cut(s)	2199
HpaII	CCGG	5 cut(s)	153, 1597, 1815, 1941, 3234
HphI	GGTGA	8 cut(s)	113, 1194, 2001, 2119, 2336, 2764, 3079, 3350
Hpy188I	TCNGA	8 cut(s)	295, 1032, 1279, 1456, 2842, 2847, 3033, 3384
HpyAV	CCTTC	5 cut(s)	881, 1512, 1766, 1916, 2806
HpyCH4IV	ACGT	2 cut(s)	260, 803
HpyF10VI	GCNNNNNNNGC	4 cut(s)	205, 992, 1018, 2276
HpySE526I	ACGT	2 cut(s)	260, 803
HspAI	GCGC	1 cut(s)	1676
Ksp22I	TGATCA	2 cut(s)	792, 1089
KspAI	GTTAAC	1 cut(s)	2199
LguI	GCTCTTC	1 cut(s)	1371
LmnI	GCTCC	7 cut(s)	170, 256, 758, 2064, 2623, 2645, 2909
LweI	GCATC	6 cut(s)	353, 1558, 2131, 2257, 2508, 3197
MaeI	CTAG	8 cut(s)	158, 411, 572, 996, 1655, 2126, 2352, 2993
MaeII	ACGT	2 cut(s)	260, 803
MaeIII	GTNAC	8 cut(s)	91, 403, 469, 549, 1190, 1810, 1913, 2017
MfeI	CAATTG	2 cut(s)	2202, 2283
MflI	RGATCY	2 cut(s)	1053, 2653
MhlI	GDGCHC	6 cut(s)	210, 531, 778, 825, 1114, 2788
MlsI	TGGCCA	1 cut(s)	78
MluNI	TGGCCA	1 cut(s)	78
MlyI	GAGTC	2 cut(s)	1083, 2039
MmeI	TCCRAC	5 cut(s)	25, 268, 1060, 2869, 3407
Mox20I	TGGCCA	1 cut(s)	78
MscI	TGGCCA	1 cut(s)	78
MseI	TTAA	7 cut(s)	492, 672, 798, 1734, 2198, 2895, 3357
MslI	CAYNNNNRTG	4 cut(s)	467, 2240, 2516, 2710
Msp20I	TGGCCA	1 cut(s)	78
MspA1I	CMGCKG	2 cut(s)	1860, 2279
MspI	CCGG	5 cut(s)	153, 1597, 1815, 1941, 3234
MunI	CAATTG	2 cut(s)	2202, 2283
Mva1269I	GAATGC	1 cut(s)	1645
MvaI	CCWGG	9 cut(s)	314, 1255, 1431, 1498, 1830, 2160, 2475, 2643, 3366
MvnI	CGCG	1 cut(s)	322
MwoI	GCNNNNNNNGC	4 cut(s)	205, 992, 1018, 2276
NciI	CCSGG	1 cut(s)	1942
NcoI	CCATGG	1 cut(s)	3063
NdeI	CATATG	1 cut(s)	3019
NheI	GCTAGC	1 cut(s)	995
NlaIV	GGNNCC	6 cut(s)	117, 318, 1946, 2060, 2424, 3438
NmuCI	GTSAC	3 cut(s)	469, 549, 2017
NspI	RCATGY	1 cut(s)	1753
NspV	TTCGAA	1 cut(s)	1320
PceI	AGGCCT	2 cut(s)	617, 1828
PciSI	GCTCTTC	1 cut(s)	1371
PctI	GAATGC	1 cut(s)	1645
PfeI	GAWTC	5 cut(s)	941, 1493, 1538, 1646, 2763
PflMI	CCANNNNNTGG	3 cut(s)	951, 1042, 3446
PfoI	TCCNGGA	4 cut(s)	1429, 2158, 2473, 2641
PinAI	ACCGGT	2 cut(s)	152, 1814
PleI	GAGTC	2 cut(s)	1082, 2038
PpsI	GAGTC	2 cut(s)	1082, 2038
PsiI	TTATAA	1 cut(s)	2751
Psp124BI	GAGCTC	2 cut(s)	531, 825
Psp6I	CCWGG	9 cut(s)	312, 1253, 1429, 1496, 1828, 2158, 2473, 2641, 3364
PspEI	GGTNACC	1 cut(s)	403
PspFI	CCCAGC	2 cut(s)	1049, 2963
PspGI	CCWGG	9 cut(s)	312, 1253, 1429, 1496, 1828, 2158, 2473, 2641, 3364
PspN4I	GGNNCC	6 cut(s)	117, 318, 1946, 2060, 2424, 3438
PspPI	GGNCC	6 cut(s)	116, 317, 1083, 1521, 2423, 3437
PstI	CTGCAG	4 cut(s)	1082, 1363, 1797, 3205
PstNI	CAGNNNCTG	2 cut(s)	473, 3446
PsuI	RGATCY	2 cut(s)	1053, 2653
PvuII	CAGCTG	1 cut(s)	2279
RsaI	GTAC	2 cut(s)	1418, 2972
RsaNI	GTAC	2 cut(s)	1417, 2971
RseI	CAYNNNNRTG	4 cut(s)	467, 2240, 2516, 2710
SacI	GAGCTC	2 cut(s)	531, 825
SapI	GCTCTTC	1 cut(s)	1371
SaqAI	TTAA	7 cut(s)	492, 672, 798, 1734, 2198, 2895, 3357
Sau96I	GGNCC	6 cut(s)	116, 317, 1083, 1521, 2423, 3437
SchI	GAGTC	2 cut(s)	1083, 2039
SduI	GDGCHC	6 cut(s)	210, 531, 778, 825, 1114, 2788
SfaNI	GCATC	6 cut(s)	353, 1558, 2131, 2257, 2508, 3197
SfcI	CTRYAG	6 cut(s)	1078, 1359, 1404, 1793, 2578, 3201
SfuI	TTCGAA	1 cut(s)	1320
SinI	GGWCC	4 cut(s)	317, 1083, 2423, 3437
SmiMI	CAYNNNNRTG	4 cut(s)	467, 2240, 2516, 2710
SmlI	CTYRAG	2 cut(s)	2135, 2522
SmoI	CTYRAG	2 cut(s)	2135, 2522
SseBI	AGGCCT	2 cut(s)	617, 1828
SsiI	CCGC	4 cut(s)	320, 354, 1860, 2434
SspI	AATATT	2 cut(s)	431, 2459
SspMI	CTAG	8 cut(s)	158, 411, 572, 996, 1655, 2126, 2352, 2993
SstI	GAGCTC	2 cut(s)	531, 825
StuI	AGGCCT	2 cut(s)	617, 1828
StyI	CCWWGG	2 cut(s)	2775, 3063
TaiI	ACGT	2 cut(s)	263, 806
TaqI	TCGA	9 cut(s)	273, 361, 710, 827, 1320, 2121, 2367, 2454, 2950
TatI	WGTACW	1 cut(s)	2970
TauI	GCSGC	1 cut(s)	2436
TfiI	GAWTC	5 cut(s)	941, 1493, 1538, 1646, 2763
Tru1I	TTAA	7 cut(s)	492, 672, 798, 1734, 2198, 2895, 3357
Tru9I	TTAA	7 cut(s)	492, 672, 798, 1734, 2198, 2895, 3357
TseFI	GTSAC	3 cut(s)	469, 549, 2017
Tsp45I	GTSAC	3 cut(s)	469, 549, 2017
TspGWI	ACGGA	1 cut(s)	3162
Van91I	CCANNNNNTGG	3 cut(s)	951, 1042, 3446
VneI	GTGCAC	2 cut(s)	206, 774
VpaK11BI	GGWCC	4 cut(s)	317, 1083, 2423, 3437
XapI	RAATTY	5 cut(s)	476, 1167, 1935, 1974, 3092
XbaI	TCTAGA	2 cut(s)	157, 410
XceI	RCATGY	1 cut(s)	1753
XcmI	CCANNNNNNNNNTGG	3 cut(s)	952, 1297, 1687
XmiI	GTMKAC	2 cut(s)	309, 663
XspI	CTAG	8 cut(s)	158, 411, 572, 996, 1655, 2126, 2352, 2993

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.