Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006990

Physical Location & Seq

Genomic Coordinates Forward (+)

6398531 .. 6400029

Gene Structure 1499 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G18590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1041 bp

ATGGAATCCAAAACCATAAACGACGTCGTCGTATCAGAGTCAAATCACGAGTTAGCATCTTCGTCGCCATCAGAATTTGAGAAGAACCAGAAACATTACCAAGAAATCATCGCAACTCTTCCTCACAAAGATGGCTGGAGACCAAAAGATCCGTTCGTTGAGTACGGTGGTCACTGGTGGCTACAACCTCTTCTTGAAGGTTTACTTCACGCCCAGAAGTTCTTCAAGGCACGTCCCAATGATTTCTTCGTCTGCAGCTACCCAAAAACCGGCACGACTTGGCTCAAAGCCTTAACTTTCGCAATCGCAAATCGCTCCAAGTTCGACGTTTCAACAAACCCTCTTCTCAAACGTAATCCACACGAGTTTGTGCCTTACATCGAAATCGACTTCCCGTTTTTCCCAAGCGTTGATGTTCTTAAAGACGAAGGAAACACGCTTTTCTCGACTCATATCCCTTATGATCTCTTACCTGAATCAGTTGTGAAATCTGGTTGCAAGATTGTTTACATATGGAGAGACCCAAAGGACACGTTTGTGTCGATGTGGACTTTTGCTCACAAGGAGAGATCACAACAAGGACCAGTGGTTAGCATTGAGGAAGCTTTTGATAAGTACTGTCAAGGTTTATCAGCTTACGGTCCTTATCTTGATCATGTTTTAGGGTATTGGAAAGCTTACCAAGCAAACCCGGATCAGATTTTGTTTCTCAAGTATGAGACAATGAGAGCTGATCCATTGCCTTATGTGAAGAGATTAGCTGAGTTTATGGGTTATGGGTTCACGAAGGAGGAAGAGGAGGGAAATGTTGTTGAGAAAGTAGTGAAGCTTTGTAGCTTTGAGACTTTGAAGAATCTTGAAGCTAACAAAGGTGAGAAAGATAGAGAAGATCGTCCTGCTGTTTATGCCAACAGTGCGTATTTCAGGAAAGGGAAAGTTGGGGATTGGCAGAATTATCTGACTCCGGAGATGGTGGCTCGTATTGATGGTTTGATGGAAGAGAAGTTTAAAGGAACTGGCTTTCTTTCTTCAAAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0006082 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008146 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009611 GO:0009719 GO:0009725 GO:0009753 GO:0009814 GO:0009861 GO:0009987 GO:0010033 GO:0016143 GO:0016144 GO:0016740 GO:0016782 GO:0019748 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0032260 GO:0042221 GO:0043207 GO:0043436 GO:0044237 GO:0044249 GO:0044272 GO:0044281 GO:0044550 GO:0045087 GO:0047364 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0080066 GO:0080067 GO:0080068 GO:0080069 GO:0080070 GO:0080071 GO:0098542 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00380 ko00966 ko01110 ko01210 map00380 map00966 map01110 map01210

Pfam Domains

Protein Families

Sulfotransfer_1

Protein Analysis

346

Amino Acids

39.91

Weight (kDa)

6.04

Isoelectric Point (pI)

38.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sulfotransfer_1	PF00685	79 - 340	2e-69	Sulfotransferase domain
Sulfotransfer_3	PF13469	167 - 261	2e-06	Sulfotransferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18590 AT1G74090 AT1G74100
fragaria_vesca	FvH4_5g13430 FvH4_5g13440
malus_domestica	MD06G1205100.v1.1 MD14G1216100.v1.1
prunus_persica	Prupe.5G209000_v2.0.a1 Prupe.5G209100_v2.0.a1 Prupe.5G209500_v2.0.a1 Prupe.5G209600_v2.0.a1
pyrus_communis	pycom06g18330 pycom14g17890
rosa_chinensis	RchiOBHm_Chr4g0409371 RchiOBHm_Chr7g0183681
rosa_laevigata	RLG00000005033
rosa_multiflora	Rmu_sc0003610.1_g000024
rosa_roxburghii	Rroxscaffold_3G00270330 Rroxscaffold_5G00353900
rosa_rugosa	Rorug04G0093300
rosa_samantha	Rh4BG154400 Rh4DG148900 Rh7BG060200 Rh7CG061800
rosa_wichuraiana	Rw7G004980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	27
AccIII	TCCGGA	1 cut(s)	964
AclWI	GGATC	3 cut(s)	143, 702, 728
AcsI	RAATTY	1 cut(s)	74
AcyI	GRCGYC	1 cut(s)	24
AfaI	GTAC	2 cut(s)	164, 617
AfiI	CCNNNNNNNGG	1 cut(s)	269
AflIII	ACRYGT	1 cut(s)	531
AgsI	TTSAA	6 cut(s)	197, 226, 333, 850, 860, 1032
AjiI	CACGTC	1 cut(s)	233
AjuI	GAANNNNNNNTTGG	2 cut(s)	230, 262
AleI	CACNNNNGTG	1 cut(s)	536
AluBI	AGCT	9 cut(s)	258, 605, 635, 677, 731, 761, 829, 837, 863
AluI	AGCT	9 cut(s)	258, 605, 635, 677, 731, 761, 829, 837, 863
Alw26I	GTCTC	4 cut(s)	133, 513, 713, 836
AlwI	GGATC	3 cut(s)	143, 702, 728
Aor13HI	TCCGGA	1 cut(s)	964
ApeKI	GCWGC	1 cut(s)	255
ApoI	RAATTY	1 cut(s)	74
Asp700I	GAANNNNTTC	1 cut(s)	221
AspS9I	GGNCC	2 cut(s)	581, 641
AsuC2I	CCSGG	1 cut(s)	692
AsuHPI	GGTGA	1 cut(s)	884
AvaII	GGWCC	2 cut(s)	581, 641
BauI	CACGAG	2 cut(s)	47, 362
BbvI	GCAGC	1 cut(s)	267
BccI	CCATC	5 cut(s)	76, 125, 964, 980, 988
BcgI	CGANNNNNNTGC	2 cut(s)	45, 79
BclI	TGATCA	1 cut(s)	652
BcnI	CCSGG	1 cut(s)	692
BcoDI	GTCTC	4 cut(s)	133, 513, 713, 836
BfmI	CTRYAG	1 cut(s)	253
BisI	GCNGC	1 cut(s)	256
BlsI	GCNGC	1 cut(s)	257
BmcAI	AGTACT	1 cut(s)	617
Bme1390I	CCNGG	1 cut(s)	692
Bme18I	GGWCC	2 cut(s)	581, 641
BmgBI	CACGTC	1 cut(s)	233
BmgT120I	GGNCC	2 cut(s)	581, 641
BmrFI	CCNGG	1 cut(s)	692
BmsI	GCATC	1 cut(s)	65
BpmI	CTGGAG	1 cut(s)	157
BpuEI	CTTGAG	1 cut(s)	695
BpuMI	CCSGG	1 cut(s)	692
BsaHI	GRCGYC	1 cut(s)	24
BsaI	GGTCTC	2 cut(s)	133, 513
BsaWI	WCCGGW	1 cut(s)	964
Bsc4I	CCNNNNNNNGG	1 cut(s)	269
Bse118I	RCCGGY	1 cut(s)	269
Bse1I	ACTGG	3 cut(s)	179, 584, 1021
Bse3DI	GCAATG	1 cut(s)	737
BseAI	TCCGGA	1 cut(s)	964
BseLI	CCNNNNNNNGG	1 cut(s)	269
BseMI	GCAATG	1 cut(s)	737
BseMII	CTCAG	1 cut(s)	753
BseNI	ACTGG	3 cut(s)	179, 584, 1021
BseRI	GAGGAG	1 cut(s)	812
BseXI	GCAGC	1 cut(s)	267
BsiSI	CCGG	3 cut(s)	270, 692, 965
BslFI	GGGAC	1 cut(s)	219
BslI	CCNNNNNNNGG	1 cut(s)	269
BsmAI	GTCTC	4 cut(s)	133, 513, 713, 836
BsmFI	GGGAC	1 cut(s)	219
Bso31I	GGTCTC	2 cut(s)	133, 513
Bsp13I	TCCGGA	1 cut(s)	964
Bsp143I	GATC	7 cut(s)	148, 463, 569, 652, 694, 733, 889
BspCNI	CTCAG	1 cut(s)	754
BspEI	TCCGGA	1 cut(s)	964
BspHI	TCATGA	1 cut(s)	1037
BspMAI	CTGCAG	1 cut(s)	257
BspPI	GGATC	3 cut(s)	143, 702, 728
BspTNI	GGTCTC	2 cut(s)	133, 513
BsrDI	GCAATG	1 cut(s)	737
BsrFI	RCCGGY	1 cut(s)	269
BsrI	ACTGG	3 cut(s)	179, 584, 1021
BssAI	RCCGGY	1 cut(s)	269
BssMI	GATC	7 cut(s)	148, 463, 569, 652, 694, 733, 889
BssNI	GRCGYC	1 cut(s)	24
BssSI	CACGAG	2 cut(s)	47, 362
Bst2BI	CACGAG	2 cut(s)	47, 362
Bst4CI	ACNGT	4 cut(s)	167, 620, 641, 914
Bst6I	CTCTTC	6 cut(s)	123, 195, 348, 746, 789, 993
BstACI	GRCGYC	1 cut(s)	24
BstDEI	CTNAG	1 cut(s)	762
BstKTI	GATC	7 cut(s)	151, 466, 572, 655, 697, 736, 892
BstMAI	GTCTC	4 cut(s)	133, 513, 713, 836
BstMBI	GATC	7 cut(s)	148, 463, 569, 652, 694, 733, 889
BstMWI	GCNNNNNNNGC	3 cut(s)	683, 905, 914
BstSCI	CCNGG	1 cut(s)	690
BstSFI	CTRYAG	1 cut(s)	253
BstV1I	GCAGC	1 cut(s)	267
BstX2I	RGATCY	1 cut(s)	148
BstYI	RGATCY	1 cut(s)	148
BtgZI	GCGATG	1 cut(s)	94
BtrI	CACGTC	1 cut(s)	233
BtsIMutI	CAGTG	3 cut(s)	172, 591, 919
CciI	TCATGA	1 cut(s)	1037
Cfr10I	RCCGGY	1 cut(s)	269
Cfr13I	GGNCC	2 cut(s)	581, 641
Csp6I	GTAC	2 cut(s)	163, 616
CviAII	CATG	2 cut(s)	656, 1038
CviQI	GTAC	2 cut(s)	163, 616
DdeI	CTNAG	1 cut(s)	762
DpnI	GATC	7 cut(s)	150, 465, 571, 654, 696, 735, 891
DpnII	GATC	7 cut(s)	148, 463, 569, 652, 694, 733, 889
DraI	TTTAAA	1 cut(s)	1009
Eam1104I	CTCTTC	6 cut(s)	123, 195, 348, 746, 789, 993
EarI	CTCTTC	6 cut(s)	123, 195, 348, 746, 789, 993
Eco31I	GGTCTC	2 cut(s)	133, 513
Eco47I	GGWCC	2 cut(s)	581, 641
FaeI	CATG	2 cut(s)	659, 1041
FalI	AAGNNNNNCTT	2 cut(s)	189, 221
FaqI	GGGAC	1 cut(s)	219
FatI	CATG	2 cut(s)	655, 1037
FauNDI	CATATG	1 cut(s)	512
FbaI	TGATCA	1 cut(s)	652
Fnu4HI	GCNGC	1 cut(s)	256
Fsp4HI	GCNGC	1 cut(s)	256
GluI	GCNGC	1 cut(s)	256
GsuI	CTGGAG	1 cut(s)	157
HapII	CCGG	3 cut(s)	270, 692, 965
Hin1I	GRCGYC	1 cut(s)	24
Hin1II	CATG	2 cut(s)	659, 1041
HindIII	AAGCTT	3 cut(s)	603, 675, 827
HinfI	GANTC	6 cut(s)	5, 38, 448, 476, 853, 961
HpaII	CCGG	3 cut(s)	270, 692, 965
HphI	GGTGA	1 cut(s)	884
Hpy166II	GTNNAC	4 cut(s)	203, 508, 549, 783
Hpy188I	TCNGA	4 cut(s)	37, 73, 699, 960
Hpy188III	TCNNGA	9 cut(s)	47, 194, 445, 650, 784, 857, 925, 965, 1038
Hpy8I	GTNNAC	4 cut(s)	203, 508, 549, 783
Hpy99I	CGWCG	5 cut(s)	26, 29, 32, 67, 329
HpyAV	CCTTC	3 cut(s)	191, 422, 781
HpyCH4III	ACNGT	4 cut(s)	167, 620, 641, 914
HpyCH4IV	ACGT	5 cut(s)	24, 232, 327, 352, 533
HpyCH4V	TGCA	2 cut(s)	255, 498
HpyF10VI	GCNNNNNNNGC	3 cut(s)	683, 905, 914
HpyF3I	CTNAG	1 cut(s)	762
HpySE526I	ACGT	5 cut(s)	24, 232, 327, 352, 533
Hsp92I	GRCGYC	1 cut(s)	24
Hsp92II	CATG	2 cut(s)	659, 1041
Kpn2I	TCCGGA	1 cut(s)	964
Ksp22I	TGATCA	1 cut(s)	652
Kzo9I	GATC	7 cut(s)	148, 463, 569, 652, 694, 733, 889
LmnI	GCTCC	1 cut(s)	320
Lsp1109I	GCAGC	1 cut(s)	267
LweI	GCATC	1 cut(s)	65
MaeII	ACGT	5 cut(s)	24, 232, 327, 352, 533
MaeIII	GTNAC	1 cut(s)	170
MalI	GATC	7 cut(s)	150, 465, 571, 654, 696, 735, 891
MboI	GATC	7 cut(s)	148, 463, 569, 652, 694, 733, 889
MflI	RGATCY	1 cut(s)	148
MluCI	AATT	2 cut(s)	74, 952
MlyI	GAGTC	3 cut(s)	47, 442, 955
MnlI	CCTC	7 cut(s)	132, 198, 351, 592, 784, 790, 793
MroI	TCCGGA	1 cut(s)	964
MroXI	GAANNNNTTC	1 cut(s)	221
MseI	TTAA	3 cut(s)	293, 420, 1008
MslI	CAYNNNNRTG	2 cut(s)	129, 536
MspI	CCGG	3 cut(s)	270, 692, 965
MspR9I	CCNGG	1 cut(s)	692
MwoI	GCNNNNNNNGC	3 cut(s)	683, 905, 914
NciI	CCSGG	1 cut(s)	692
NdeI	CATATG	1 cut(s)	512
NdeII	GATC	7 cut(s)	148, 463, 569, 652, 694, 733, 889
NlaIII	CATG	2 cut(s)	659, 1041
NmuCI	GTSAC	1 cut(s)	170
OliI	CACNNNNGTG	1 cut(s)	536
PagI	TCATGA	1 cut(s)	1037
PcsI	WCGNNNNNNNCGW	3 cut(s)	27, 443, 539
PdmI	GAANNNNTTC	1 cut(s)	221
PfeI	GAWTC	3 cut(s)	5, 476, 853
PflFI	GACNNNGTC	1 cut(s)	26
PkrI	GCNGC	1 cut(s)	257
PleI	GAGTC	3 cut(s)	46, 442, 955
PpsI	GAGTC	3 cut(s)	46, 442, 955
PspPI	GGNCC	2 cut(s)	581, 641
PstI	CTGCAG	1 cut(s)	257
PsuI	RGATCY	1 cut(s)	148
PsyI	GACNNNGTC	1 cut(s)	26
RsaI	GTAC	2 cut(s)	164, 617
RsaNI	GTAC	2 cut(s)	163, 616
RseI	CAYNNNNRTG	2 cut(s)	129, 536
SaqAI	TTAA	3 cut(s)	293, 420, 1008
SatI	GCNGC	1 cut(s)	256
Sau3AI	GATC	7 cut(s)	148, 463, 569, 652, 694, 733, 889
Sau96I	GGNCC	2 cut(s)	581, 641
ScaI	AGTACT	1 cut(s)	617
SchI	GAGTC	3 cut(s)	47, 442, 955
ScrFI	CCNGG	1 cut(s)	692
SfaNI	GCATC	1 cut(s)	65
SfcI	CTRYAG	1 cut(s)	253
SinI	GGWCC	2 cut(s)	581, 641
SmiMI	CAYNNNNRTG	2 cut(s)	129, 536
SmlI	CTYRAG	1 cut(s)	710
SmoI	CTYRAG	1 cut(s)	710
Sse9I	AATT	2 cut(s)	74, 952
StyD4I	CCNGG	1 cut(s)	690
TaaI	ACNGT	4 cut(s)	167, 620, 641, 914
TaiI	ACGT	5 cut(s)	27, 235, 330, 355, 536
TaqI	TCGA	5 cut(s)	324, 381, 387, 446, 542
TasI	AATT	2 cut(s)	74, 952
TatI	WGTACW	1 cut(s)	615
TfiI	GAWTC	3 cut(s)	5, 476, 853
Tru1I	TTAA	3 cut(s)	293, 420, 1008
Tru9I	TTAA	3 cut(s)	293, 420, 1008
TscAI	CASTG	3 cut(s)	179, 591, 919
TseFI	GTSAC	1 cut(s)	170
TseI	GCWGC	1 cut(s)	255
Tsp45I	GTSAC	1 cut(s)	170
TspGWI	ACGGA	1 cut(s)	141
TspRI	CASTG	3 cut(s)	179, 591, 919
Tth111I	GACNNNGTC	1 cut(s)	26
VpaK11BI	GGWCC	2 cut(s)	581, 641
XapI	RAATTY	1 cut(s)	74
XmnI	GAANNNNTTC	1 cut(s)	221
ZraI	GACGTC	1 cut(s)	25
ZrmI	AGTACT	1 cut(s)	617

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.