Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0006990

Physical Location & Seq

Genomic Coordinates Reverse (-)

16682047 .. 16683126

Gene Structure 1080 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G209500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1080 bp

ATGGCTTCAAGTGGGTCTGATCTTTTCGATGGACAAGTAGAGGAAAACAAGAATTTCCATGAAAACTTCGGAGAAATGCTGTCAACTCTCCCTAAAGGCTTGGGAGCTGGTGGGTGTTACTACCAATACCAAGGCTTTTGGTATTCCAGCGTTTGGCTTTTAGGCACCATTTGGGCACAACGAAGTTTCAGGGCTAGAGACACTGACATTCTCTTGGCAGCCTCTCCAAAGTCCGGTACAACCTGGATGAAGGCCCTAATGTTTGCTATCGTAAATCGAAAGCGCTACCCTCATCTTCCATCATCATCATTGGCATCCCATCCGTTGCTCACAAAAAGTCCACACAATTGTGTACCATACCTAGAGGTTCGTGATGAAGAGCACATGATTGGAGGCAATCCAATCGCCTACCTAGACTCTCTTCCACCATCATCACCTAGATTGCTTTCAACCCACATTCCATACACATCGTTGCCAAAATCCATTTTGAGTGATTCGGGTGGTCGAATTGTGTATATTGCTAGGAACCCAAAAGATGTTTTTGTTTCTTACTGGAGCTTCTGCCAGAAATTTAAATCCAAAACTGACCCATCAAAAGGGCAACCACTAGCAGCAATTTCCATGGAAGAGGCATTTGAGTTGTTCTGCAAAGGGGTTTCAATTACAGGCCCCTTTTGGGATCATGTTCTCGACTACTGGAAAGCGAGCTTGGAACGCCCTGATCAGGTAGTGTTTATGAAGTACGAGGATATGAAAATGGACACAATGCAGCATGTGAAGAGGTTGGCTGAGTTCATGGGGCATCCTTTTTCGTTAGAGGAAGAGAGGCAAGGCGTTGTGCAAGAAATTATAAACTTGTGCAGTTTTCAGAATTTGAGTAATTTGGAGGTGAACAAAAGTGGGGCATATCGTGTCCATATCGCGTCCCAAACGGGGCAAACACCTTTGCTGGTGAACAACAGTGCCTTCTTCAGACGAGGAGAGATTGGAGACTCCAAGAACCATCTAACGGTTGAGATGCTTGAGCATCTGGACAAAATCACAGAGGAAAAGTTGGGTTCTTTTGGTTTGAAACTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sulfotransfer_1

Protein Analysis

360

Amino Acids

40.55

Weight (kDa)

6.64

Isoelectric Point (pI)

36.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18590 AT1G74090 AT1G74100
fragaria_vesca	FvH4_5g13430 FvH4_5g13440
malus_domestica	MD06G1205100.v1.1 MD14G1216100.v1.1
prunus_persica	Prupe.5G209000_v2.0.a1 Prupe.5G209100_v2.0.a1 Prupe.5G209500_v2.0.a1 Prupe.5G209600_v2.0.a1
pyrus_communis	pycom06g18330 pycom14g17890
rosa_chinensis	RchiOBHm_Chr4g0409371 RchiOBHm_Chr7g0183681
rosa_laevigata	RLG00000005033
rosa_multiflora	Rmu_sc0003610.1_g000024
rosa_roxburghii	Rroxscaffold_3G00270330 Rroxscaffold_5G00353900
rosa_rugosa	Rorug04G0093300
rosa_samantha	Rh4BG154400 Rh4DG148900 Rh7BG060200 Rh7CG061800
rosa_wichuraiana	Rw7G004980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	851
AccB1I	GGYRCC	1 cut(s)	164
AccB7I	CCANNNNNTGG	1 cut(s)	153
AccII	CGCG	1 cut(s)	923
AclWI	GGATC	1 cut(s)	687
AcsI	RAATTY	3 cut(s)	52, 569, 871
AcuI	CTGAAG	1 cut(s)	955
AfaI	GTAC	3 cut(s)	238, 354, 743
AfeI	AGCGCT	1 cut(s)	284
AfiI	CCNNNNNNNGG	7 cut(s)	153, 233, 596, 676, 724, 933, 1009
AgsI	TTSAA	4 cut(s)	9, 450, 660, 1072
AjnI	CCWGG	1 cut(s)	242
AjuI	GAANNNNNNNTTGG	2 cut(s)	692, 724
AleI	CACNNNNGTG	1 cut(s)	348
AluBI	AGCT	3 cut(s)	107, 558, 708
AluI	AGCT	3 cut(s)	107, 558, 708
Alw21I	GWGCWC	1 cut(s)	384
Alw26I	GTCTC	2 cut(s)	192, 984
AlwI	GGATC	1 cut(s)	687
Aor51HI	AGCGCT	1 cut(s)	284
AoxI	GGCC	2 cut(s)	252, 667
ApeKI	GCWGC	3 cut(s)	218, 611, 769
ApoI	RAATTY	3 cut(s)	52, 569, 871
AspLEI	GCGC	1 cut(s)	285
AspS9I	GGNCC	2 cut(s)	253, 668
AsuHPI	GGTGA	3 cut(s)	426, 901, 964
BaeGI	GKGCMC	1 cut(s)	178
BanI	GGYRCC	1 cut(s)	164
Bbv12I	GWGCWC	1 cut(s)	384
BbvI	GCAGC	3 cut(s)	230, 623, 781
BccI	CCATC	6 cut(s)	23, 307, 327, 436, 598, 1011
BcgI	CGANNNNNNTGC	2 cut(s)	385, 419
BciT130I	CCWGG	1 cut(s)	244
BclI	TGATCA	1 cut(s)	721
BcoDI	GTCTC	2 cut(s)	192, 984
BfaI	CTAG	6 cut(s)	195, 362, 413, 438, 522, 608
BfoI	RGCGCY	1 cut(s)	286
BisI	GCNGC	3 cut(s)	219, 612, 770
BlsI	GCNGC	3 cut(s)	220, 613, 771
Bme1390I	CCNGG	1 cut(s)	244
BmgT120I	GGNCC	2 cut(s)	253, 668
BmiI	GGNNCC	3 cut(s)	166, 527, 670
BmrFI	CCNGG	1 cut(s)	244
BmsI	GCATC	4 cut(s)	323, 811, 1008, 1036
BpmI	CTGGAG	1 cut(s)	574
BpuEI	CTTGAG	1 cut(s)	1043
BsaJI	CCNNGG	2 cut(s)	130, 621
BsaWI	WCCGGW	1 cut(s)	233
Bsc4I	CCNNNNNNNGG	7 cut(s)	153, 233, 596, 676, 724, 933, 1009
Bse1I	ACTGG	2 cut(s)	557, 701
BseBI	CCWGG	1 cut(s)	244
BseDI	CCNNGG	2 cut(s)	130, 621
BseGI	GGATG	4 cut(s)	252, 314, 319, 802
BseLI	CCNNNNNNNGG	7 cut(s)	153, 233, 596, 676, 724, 933, 1009
BseMII	CTCAG	1 cut(s)	780
BseNI	ACTGG	2 cut(s)	557, 701
BseRI	GAGGAG	1 cut(s)	993
BseSI	GKGCMC	1 cut(s)	178
BseXI	GCAGC	3 cut(s)	230, 623, 781
BsgI	GTGCAG	1 cut(s)	880
Bsh1236I	CGCG	1 cut(s)	923
BshFI	GGCC	2 cut(s)	254, 669
BshNI	GGYRCC	1 cut(s)	164
BsiHKAI	GWGCWC	1 cut(s)	384
BsiSI	CCGG	1 cut(s)	234
BslFI	GGGAC	1 cut(s)	910
BslI	CCNNNNNNNGG	7 cut(s)	153, 233, 596, 676, 724, 933, 1009
BsmAI	GTCTC	2 cut(s)	192, 984
BsmFI	GGGAC	1 cut(s)	910
BsnI	GGCC	2 cut(s)	254, 669
Bsp1286I	GDGCHC	2 cut(s)	178, 384
Bsp143I	GATC	3 cut(s)	19, 679, 721
Bsp19I	CCATGG	1 cut(s)	621
BspANI	GGCC	2 cut(s)	254, 669
BspCNI	CTCAG	1 cut(s)	781
BspFNI	CGCG	1 cut(s)	923
BspLI	GGNNCC	3 cut(s)	166, 527, 670
BspPI	GGATC	1 cut(s)	687
BspQI	GCTCTTC	1 cut(s)	372
BspT107I	GGYRCC	1 cut(s)	164
BsrI	ACTGG	2 cut(s)	557, 701
BssECI	CCNNGG	2 cut(s)	130, 621
BssMI	GATC	3 cut(s)	19, 679, 721
BssT1I	CCWWGG	2 cut(s)	130, 621
Bst2UI	CCWGG	1 cut(s)	244
Bst4CI	ACNGT	2 cut(s)	962, 1012
Bst6I	CTCTTC	5 cut(s)	372, 426, 621, 773, 816
BstC8I	GCNNGC	1 cut(s)	706
BstDEI	CTNAG	1 cut(s)	789
BstDSI	CCRYGG	1 cut(s)	621
BstF5I	GGATG	4 cut(s)	252, 314, 319, 802
BstFNI	CGCG	1 cut(s)	923
BstH2I	RGCGCY	1 cut(s)	286
BstHHI	GCGC	1 cut(s)	285
BstKTI	GATC	3 cut(s)	22, 682, 724
BstMAI	GTCTC	2 cut(s)	192, 984
BstMBI	GATC	3 cut(s)	19, 679, 721
BstMWI	GCNNNNNNNGC	1 cut(s)	714
BstNI	CCWGG	1 cut(s)	244
BstNSI	RCATGY	1 cut(s)	776
BstSCI	CCNGG	1 cut(s)	242
BstSLI	GKGCMC	1 cut(s)	178
BstUI	CGCG	1 cut(s)	923
BstV1I	GCAGC	3 cut(s)	230, 623, 781
BsuRI	GGCC	2 cut(s)	254, 669
BtgI	CCRYGG	1 cut(s)	621
BtsCI	GGATG	4 cut(s)	252, 314, 319, 802
BtsIMutI	CAGTG	2 cut(s)	201, 967
Cac8I	GCNNGC	1 cut(s)	706
CfoI	GCGC	1 cut(s)	285
Cfr13I	GGNCC	2 cut(s)	253, 668
CseI	GACGC	1 cut(s)	912
Csp6I	GTAC	3 cut(s)	237, 353, 742
CviAII	CATG	6 cut(s)	59, 385, 622, 683, 773, 796
CviQI	GTAC	3 cut(s)	237, 353, 742
DdeI	CTNAG	1 cut(s)	789
DpnI	GATC	3 cut(s)	21, 681, 723
DpnII	GATC	3 cut(s)	19, 679, 721
DraI	TTTAAA	1 cut(s)	574
Eam1104I	CTCTTC	5 cut(s)	372, 426, 621, 773, 816
EarI	CTCTTC	5 cut(s)	372, 426, 621, 773, 816
Eco130I	CCWWGG	2 cut(s)	130, 621
Eco47III	AGCGCT	1 cut(s)	284
Eco57I	CTGAAG	1 cut(s)	955
EcoO109I	RGGNCCY	2 cut(s)	253, 668
EcoRII	CCWGG	1 cut(s)	242
EcoT14I	CCWWGG	2 cut(s)	130, 621
ErhI	CCWWGG	2 cut(s)	130, 621
FaeI	CATG	6 cut(s)	62, 388, 625, 686, 776, 799
FaqI	GGGAC	1 cut(s)	910
FatI	CATG	6 cut(s)	58, 384, 621, 682, 772, 795
FbaI	TGATCA	1 cut(s)	721
Fnu4HI	GCNGC	3 cut(s)	219, 612, 770
FokI	GGATG	4 cut(s)	259, 301, 306, 789
Fsp4HI	GCNGC	3 cut(s)	219, 612, 770
FspBI	CTAG	6 cut(s)	195, 362, 413, 438, 522, 608
GlaI	GCGC	1 cut(s)	284
GluI	GCNGC	3 cut(s)	219, 612, 770
GsuI	CTGGAG	1 cut(s)	574
HaeII	RGCGCY	1 cut(s)	286
HaeIII	GGCC	2 cut(s)	254, 669
HapII	CCGG	1 cut(s)	234
HgaI	GACGC	1 cut(s)	912
HhaI	GCGC	1 cut(s)	285
Hin1II	CATG	6 cut(s)	62, 388, 625, 686, 776, 799
Hin6I	GCGC	1 cut(s)	283
HinP1I	GCGC	1 cut(s)	283
HincII	GTYRAC	1 cut(s)	84
HindII	GTYRAC	1 cut(s)	84
HinfI	GANTC	3 cut(s)	416, 494, 992
HpaII	CCGG	1 cut(s)	234
HphI	GGTGA	3 cut(s)	426, 901, 964
Hpy166II	GTNNAC	5 cut(s)	84, 341, 353, 892, 955
Hpy188I	TCNGA	4 cut(s)	19, 71, 870, 974
Hpy188III	TCNNGA	3 cut(s)	371, 689, 1031
Hpy8I	GTNNAC	5 cut(s)	84, 341, 353, 892, 955
HpyAV	CCTTC	2 cut(s)	244, 976
HpyCH4III	ACNGT	2 cut(s)	962, 1012
HpyCH4V	TGCA	4 cut(s)	648, 769, 841, 861
HpyF10VI	GCNNNNNNNGC	1 cut(s)	714
HpyF3I	CTNAG	1 cut(s)	789
Hsp92II	CATG	6 cut(s)	62, 388, 625, 686, 776, 799
HspAI	GCGC	1 cut(s)	283
Ksp22I	TGATCA	1 cut(s)	721
Kzo9I	GATC	3 cut(s)	19, 679, 721
LguI	GCTCTTC	1 cut(s)	372
LmnI	GCTCC	2 cut(s)	104, 555
Lsp1109I	GCAGC	3 cut(s)	230, 623, 781
LweI	GCATC	4 cut(s)	323, 811, 1008, 1036
MaeI	CTAG	6 cut(s)	195, 362, 413, 438, 522, 608
MaeIII	GTNAC	1 cut(s)	116
MalI	GATC	3 cut(s)	21, 681, 723
MboI	GATC	3 cut(s)	19, 679, 721
MboII	GAAGA	7 cut(s)	287, 389, 413, 638, 790, 833, 961
MfeI	CAATTG	1 cut(s)	346
MhlI	GDGCHC	2 cut(s)	178, 384
MluCI	AATT	9 cut(s)	52, 346, 507, 569, 615, 660, 846, 871, 880
MlyI	GAGTC	2 cut(s)	410, 986
MseI	TTAA	1 cut(s)	573
MslI	CAYNNNNRTG	1 cut(s)	348
MspI	CCGG	1 cut(s)	234
MspR9I	CCNGG	1 cut(s)	244
MunI	CAATTG	1 cut(s)	346
MvaI	CCWGG	1 cut(s)	244
MvnI	CGCG	1 cut(s)	923
MwoI	GCNNNNNNNGC	1 cut(s)	714
NcoI	CCATGG	1 cut(s)	621
NdeII	GATC	3 cut(s)	19, 679, 721
NlaIII	CATG	6 cut(s)	62, 388, 625, 686, 776, 799
NlaIV	GGNNCC	3 cut(s)	166, 527, 670
NspI	RCATGY	1 cut(s)	776
OliI	CACNNNNGTG	1 cut(s)	348
PciSI	GCTCTTC	1 cut(s)	372
PfeI	GAWTC	1 cut(s)	494
PflMI	CCANNNNNTGG	1 cut(s)	153
PkrI	GCNGC	3 cut(s)	220, 613, 771
PleI	GAGTC	2 cut(s)	410, 986
PpsI	GAGTC	2 cut(s)	410, 986
PsiI	TTATAA	1 cut(s)	851
Psp6I	CCWGG	1 cut(s)	242
PspGI	CCWGG	1 cut(s)	242
PspN4I	GGNNCC	3 cut(s)	166, 527, 670
PspPI	GGNCC	2 cut(s)	253, 668
RsaI	GTAC	3 cut(s)	238, 354, 743
RsaNI	GTAC	3 cut(s)	237, 353, 742
RseI	CAYNNNNRTG	1 cut(s)	348
SapI	GCTCTTC	1 cut(s)	372
SaqAI	TTAA	1 cut(s)	573
SatI	GCNGC	3 cut(s)	219, 612, 770
Sau3AI	GATC	3 cut(s)	19, 679, 721
Sau96I	GGNCC	2 cut(s)	253, 668
SchI	GAGTC	2 cut(s)	410, 986
ScrFI	CCNGG	1 cut(s)	244
SduI	GDGCHC	2 cut(s)	178, 384
SfaNI	GCATC	4 cut(s)	323, 811, 1008, 1036
SmiI	ATTTAAAT	1 cut(s)	574
SmiMI	CAYNNNNRTG	1 cut(s)	348
SmlI	CTYRAG	1 cut(s)	1022
SmoI	CTYRAG	1 cut(s)	1022
Sse9I	AATT	9 cut(s)	52, 346, 507, 569, 615, 660, 846, 871, 880
SspMI	CTAG	6 cut(s)	195, 362, 413, 438, 522, 608
StyD4I	CCNGG	1 cut(s)	242
StyI	CCWWGG	2 cut(s)	130, 621
SwaI	ATTTAAAT	1 cut(s)	574
TaaI	ACNGT	2 cut(s)	962, 1012
TaqI	TCGA	4 cut(s)	27, 277, 505, 690
TasI	AATT	9 cut(s)	52, 346, 507, 569, 615, 660, 846, 871, 880
TfiI	GAWTC	1 cut(s)	494
Tru1I	TTAA	1 cut(s)	573
Tru9I	TTAA	1 cut(s)	573
TscAI	CASTG	2 cut(s)	208, 967
TseI	GCWGC	3 cut(s)	218, 611, 769
TspDTI	ATGAA	6 cut(s)	75, 263, 390, 752, 767, 784
TspGWI	ACGGA	1 cut(s)	312
TspRI	CASTG	2 cut(s)	208, 967
Van91I	CCANNNNNTGG	1 cut(s)	153
XapI	RAATTY	3 cut(s)	52, 569, 871
XceI	RCATGY	1 cut(s)	776
XspI	CTAG	6 cut(s)	195, 362, 413, 438, 522, 608

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.