Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0006990

Physical Location & Seq

Genomic Coordinates Reverse (-)

16647502 .. 16648764

Gene Structure 1263 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G209100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGGCTTCTCTCGCCCTCTCTGCTTATCAAGAACAGGAGGAAAAAAAAGATGTCCTCCAAAACTGCGAAGAAATTATCTCAACCCTCCCTAAAGACAGAGGCTGGGGAACCGAGCATTACTACCAATATGAAGGCTTTTGGTACCCCCCCATTTTTCTTGAAGGTGTCATTTGGGCACAAGCAAATTTCAGGGCTAGAGACGATGACATTTTCTTGGCCACTTTTCCCAAGTGTGGCACAACATGGGTGAAGGCTCTCATGTTTGCCATCCAAAATAGAGAAAACTATGATTTTTTGTCACATCCATTGCTCACAAAAAGCCCTCAGGATTGTGTGCCCTACATAGAGTTACTTGCTCACCAAGATAACCCAATTGACTACCTTGACGCTATCGCCTCACCTAGATTCCTTGCGACTCACATTCCACACAGGTCGTTGCCAAGGTCCATTTTGAATTCTGGTACTAAAATTGTATCCGTTGCTAGGAACCCAAAAGATGTTCTTATTTCTTATTGGGTATTTTCCCAAAAAATAAGATCAAGTATAAACAAGCTAGCTCCTCTTCCCATGGAAGAGGGGTTTGAGTTGTTCTGCAAAGGGGTTGCACTTTCTGGCCCATTTTGGGATAATGTACTGGGTTATTGGGAAGCAAGCTTGGAAAACCCAGAGAAGGTTCTGTTTTTGAAGTTCGAGGATATCAAGATTGACACAGATTGCTCTGTAAAGAGGCTGGCAGAGTTCATGGGCCTTCCTTTTTCATCAAAGGAAGAGCAAGAAGGGGTTGTGCGAGAAATAATAAAGTTGTGCAGTTTTGACAACTTGAGTAATTTGGAGGTGAACAAAAGTGGGACATTCAGCAACGCTGATGGAAAATTCAGCAACGCTGTCTTCTTCAGACGAGGGCAGACTGGAGACTCAAAGAACCACCTAACACCTGAGATGCTCGACCGTCTTGACAAAATTACAGAGCAAAAATTGGGCGCTTCTGGTCTGAAATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sulfotransfer_1

Protein Analysis

334

Amino Acids

37.97

Weight (kDa)

5.41

Isoelectric Point (pI)

37.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18590 AT1G74090 AT1G74100
fragaria_vesca	FvH4_5g13430 FvH4_5g13440
malus_domestica	MD06G1205100.v1.1 MD14G1216100.v1.1
prunus_persica	Prupe.5G209000_v2.0.a1 Prupe.5G209100_v2.0.a1 Prupe.5G209500_v2.0.a1 Prupe.5G209600_v2.0.a1
pyrus_communis	pycom06g18330 pycom14g17890
rosa_chinensis	RchiOBHm_Chr4g0409371 RchiOBHm_Chr7g0183681
rosa_laevigata	RLG00000005033
rosa_multiflora	Rmu_sc0003610.1_g000024
rosa_roxburghii	Rroxscaffold_3G00270330 Rroxscaffold_5G00353900
rosa_rugosa	Rorug04G0093300
rosa_samantha	Rh4BG154400 Rh4DG148900 Rh7BG060200 Rh7CG061800
rosa_wichuraiana	Rw7G004980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	141
AccB1I	GGYRCC	1 cut(s)	141
AcoI	YGGCCR	1 cut(s)	216
AcsI	RAATTY	4 cut(s)	184, 454, 872, 995
AcuI	CTGAAG	1 cut(s)	877
AfaI	GTAC	3 cut(s)	143, 463, 633
AfiI	CCNNNNNNNGG	4 cut(s)	233, 483, 622, 670
AgsI	TTSAA	3 cut(s)	161, 454, 685
AluBI	AGCT	3 cut(s)	553, 557, 654
AluI	AGCT	3 cut(s)	553, 557, 654
Alw26I	GTCTC	2 cut(s)	192, 906
AlwNI	CAGNNNCTG	1 cut(s)	102
AoxI	GGCC	3 cut(s)	216, 613, 745
ApoI	RAATTY	4 cut(s)	184, 454, 872, 995
Asp718I	GGTACC	1 cut(s)	141
AspLEI	GCGC	1 cut(s)	983
AspS9I	GGNCC	3 cut(s)	444, 614, 745
AsuHPI	GGTGA	4 cut(s)	259, 350, 390, 847
AsuNHI	GCTAGC	1 cut(s)	553
AvaII	GGWCC	1 cut(s)	444
AxyI	CCTNAGG	1 cut(s)	324
BaeGI	GKGCMC	2 cut(s)	178, 339
BalI	TGGCCA	1 cut(s)	218
BanI	GGYRCC	1 cut(s)	141
BbsI	GAAGAC	1 cut(s)	880
BccI	CCATC	2 cut(s)	275, 860
BciVI	GTATCC	1 cut(s)	484
BcoDI	GTCTC	2 cut(s)	192, 906
BfaI	CTAG	4 cut(s)	195, 402, 483, 554
BfoI	RGCGCY	1 cut(s)	984
BfuI	GTATCC	1 cut(s)	484
Bme18I	GGWCC	1 cut(s)	444
BmgT120I	GGNCC	3 cut(s)	444, 614, 745
BmiI	GGNNCC	3 cut(s)	109, 143, 488
BmrI	ACTGGG	1 cut(s)	644
BmsI	GCATC	1 cut(s)	930
BmtI	GCTAGC	1 cut(s)	557
BmuI	ACTGGG	1 cut(s)	644
BpiI	GAAGAC	1 cut(s)	880
BpmI	CTGGAG	1 cut(s)	930
BpuEI	CTTGAG	1 cut(s)	841
BsaJI	CCNNGG	2 cut(s)	440, 567
Bsc4I	CCNNNNNNNGG	4 cut(s)	233, 483, 622, 670
Bse1I	ACTGG	2 cut(s)	639, 913
Bse21I	CCTNAGG	1 cut(s)	324
Bse3DI	GCAATG	1 cut(s)	305
BseDI	CCNNGG	2 cut(s)	440, 567
BseGI	GGATG	2 cut(s)	267, 301
BseLI	CCNNNNNNNGG	4 cut(s)	233, 483, 622, 670
BseMI	GCAATG	1 cut(s)	305
BseMII	CTCAG	2 cut(s)	338, 927
BseNI	ACTGG	2 cut(s)	639, 913
BseRI	GAGGAG	1 cut(s)	549
BseSI	GKGCMC	2 cut(s)	178, 339
BseYI	CCCAGC	1 cut(s)	102
BsgI	GTGCAG	1 cut(s)	826
Bsh1285I	CGRYCG	1 cut(s)	949
BshFI	GGCC	3 cut(s)	218, 615, 747
BshNI	GGYRCC	1 cut(s)	141
BsiEI	CGRYCG	1 cut(s)	949
BslFI	GGGAC	1 cut(s)	862
BslI	CCNNNNNNNGG	4 cut(s)	233, 483, 622, 670
BsmAI	GTCTC	2 cut(s)	192, 906
BsmBI	CGTCTC	1 cut(s)	192
BsmFI	GGGAC	1 cut(s)	862
BsnI	GGCC	3 cut(s)	218, 615, 747
Bsp1286I	GDGCHC	2 cut(s)	178, 339
Bsp143I	GATC	1 cut(s)	536
Bsp19I	CCATGG	1 cut(s)	567
BspANI	GGCC	3 cut(s)	218, 615, 747
BspCNI	CTCAG	2 cut(s)	337, 928
BspLI	GGNNCC	3 cut(s)	109, 143, 488
BspOI	GCTAGC	1 cut(s)	557
BspQI	GCTCTTC	1 cut(s)	762
BspT107I	GGYRCC	1 cut(s)	141
BsrDI	GCAATG	1 cut(s)	305
BsrI	ACTGG	2 cut(s)	639, 913
BssECI	CCNNGG	2 cut(s)	440, 567
BssMI	GATC	1 cut(s)	536
BssT1I	CCWWGG	2 cut(s)	440, 567
Bst4CI	ACNGT	1 cut(s)	950
Bst6I	CTCTTC	3 cut(s)	567, 567, 762
BstC8I	GCNNGC	3 cut(s)	555, 652, 732
BstDEI	CTNAG	2 cut(s)	324, 936
BstDSI	CCRYGG	1 cut(s)	567
BstF5I	GGATG	2 cut(s)	267, 301
BstH2I	RGCGCY	1 cut(s)	984
BstHHI	GCGC	1 cut(s)	983
BstKTI	GATC	1 cut(s)	539
BstMAI	GTCTC	2 cut(s)	192, 906
BstMBI	GATC	1 cut(s)	536
BstMCI	CGRYCG	1 cut(s)	949
BstMWI	GCNNNNNNNGC	2 cut(s)	11, 20
BstSLI	GKGCMC	2 cut(s)	178, 339
BstV2I	GAAGAC	1 cut(s)	880
Bsu36I	CCTNAGG	1 cut(s)	324
BsuI	GTATCC	1 cut(s)	484
BsuRI	GGCC	3 cut(s)	218, 615, 747
BtgI	CCRYGG	1 cut(s)	567
BtsCI	GGATG	2 cut(s)	267, 301
Cac8I	GCNNGC	3 cut(s)	555, 652, 732
CaiI	CAGNNNCTG	1 cut(s)	102
CfoI	GCGC	1 cut(s)	983
Cfr13I	GGNCC	3 cut(s)	444, 614, 745
CseI	GACGC	1 cut(s)	395
Csp6I	GTAC	3 cut(s)	142, 462, 632
CviAII	CATG	4 cut(s)	243, 259, 568, 742
CviQI	GTAC	3 cut(s)	142, 462, 632
DdeI	CTNAG	2 cut(s)	324, 936
DpnI	GATC	1 cut(s)	538
DpnII	GATC	1 cut(s)	536
EaeI	YGGCCR	1 cut(s)	216
Eam1104I	CTCTTC	3 cut(s)	567, 567, 762
EarI	CTCTTC	3 cut(s)	567, 567, 762
Eco130I	CCWWGG	2 cut(s)	440, 567
Eco32I	GATATC	1 cut(s)	697
Eco47I	GGWCC	1 cut(s)	444
Eco57I	CTGAAG	1 cut(s)	877
Eco81I	CCTNAGG	1 cut(s)	324
EcoRI	GAATTC	1 cut(s)	454
EcoRV	GATATC	1 cut(s)	697
EcoT14I	CCWWGG	2 cut(s)	440, 567
ErhI	CCWWGG	2 cut(s)	440, 567
Esp3I	CGTCTC	1 cut(s)	192
FaeI	CATG	4 cut(s)	246, 262, 571, 745
FaiI	YATR	8 cut(s)	129, 244, 260, 288, 344, 545, 569, 743
FalI	AAGNNNNNCTT	2 cut(s)	486, 518
FaqI	GGGAC	1 cut(s)	862
FatI	CATG	4 cut(s)	242, 258, 567, 741
FokI	GGATG	2 cut(s)	254, 288
FspBI	CTAG	4 cut(s)	195, 402, 483, 554
GlaI	GCGC	1 cut(s)	982
GsaI	CCCAGC	1 cut(s)	106
GsuI	CTGGAG	1 cut(s)	930
HaeII	RGCGCY	1 cut(s)	984
HaeIII	GGCC	3 cut(s)	218, 615, 747
HgaI	GACGC	1 cut(s)	395
HhaI	GCGC	1 cut(s)	983
Hin1II	CATG	4 cut(s)	246, 262, 571, 745
Hin6I	GCGC	1 cut(s)	981
HinP1I	GCGC	1 cut(s)	981
HindIII	AAGCTT	1 cut(s)	652
HinfI	GANTC	3 cut(s)	405, 415, 914
HphI	GGTGA	4 cut(s)	259, 350, 390, 847
Hpy166II	GTNNAC	1 cut(s)	838
Hpy188I	TCNGA	2 cut(s)	896, 993
Hpy188III	TCNNGA	5 cut(s)	29, 158, 326, 700, 953
Hpy8I	GTNNAC	1 cut(s)	838
HpyAV	CCTTC	6 cut(s)	125, 155, 244, 664, 758, 770
HpyCH4III	ACNGT	1 cut(s)	950
HpyCH4V	TGCA	3 cut(s)	594, 605, 807
HpyF10VI	GCNNNNNNNGC	2 cut(s)	11, 20
HpyF3I	CTNAG	2 cut(s)	324, 936
Hsp92II	CATG	4 cut(s)	246, 262, 571, 745
HspAI	GCGC	1 cut(s)	981
KpnI	GGTACC	1 cut(s)	145
Kzo9I	GATC	1 cut(s)	536
LguI	GCTCTTC	1 cut(s)	762
LmnI	GCTCC	1 cut(s)	562
LweI	GCATC	1 cut(s)	930
MaeI	CTAG	4 cut(s)	195, 402, 483, 554
MaeIII	GTNAC	2 cut(s)	297, 348
MalI	GATC	1 cut(s)	538
MboI	GATC	1 cut(s)	536
MboII	GAAGA	6 cut(s)	80, 554, 584, 779, 880, 883
MfeI	CAATTG	1 cut(s)	372
MhlI	GDGCHC	2 cut(s)	178, 339
MlsI	TGGCCA	1 cut(s)	218
MluNI	TGGCCA	1 cut(s)	218
MlyI	GAGTC	2 cut(s)	409, 908
Mox20I	TGGCCA	1 cut(s)	218
MscI	TGGCCA	1 cut(s)	218
Msp20I	TGGCCA	1 cut(s)	218
MunI	CAATTG	1 cut(s)	372
MwoI	GCNNNNNNNGC	2 cut(s)	11, 20
NcoI	CCATGG	1 cut(s)	567
NdeII	GATC	1 cut(s)	536
NheI	GCTAGC	1 cut(s)	553
NlaIII	CATG	4 cut(s)	246, 262, 571, 745
NlaIV	GGNNCC	3 cut(s)	109, 143, 488
NmuCI	GTSAC	1 cut(s)	297
PciSI	GCTCTTC	1 cut(s)	762
PfeI	GAWTC	1 cut(s)	405
PleI	GAGTC	2 cut(s)	409, 908
PpsI	GAGTC	2 cut(s)	409, 908
PspFI	CCCAGC	1 cut(s)	102
PspN4I	GGNNCC	3 cut(s)	109, 143, 488
PspPI	GGNCC	3 cut(s)	444, 614, 745
PstNI	CAGNNNCTG	1 cut(s)	102
RsaI	GTAC	3 cut(s)	143, 463, 633
RsaNI	GTAC	3 cut(s)	142, 462, 632
SapI	GCTCTTC	1 cut(s)	762
Sau3AI	GATC	1 cut(s)	536
Sau96I	GGNCC	3 cut(s)	444, 614, 745
SchI	GAGTC	2 cut(s)	409, 908
SduI	GDGCHC	2 cut(s)	178, 339
SfaNI	GCATC	1 cut(s)	930
SinI	GGWCC	1 cut(s)	444
SmlI	CTYRAG	1 cut(s)	820
SmoI	CTYRAG	1 cut(s)	820
SspMI	CTAG	4 cut(s)	195, 402, 483, 554
StyI	CCWWGG	2 cut(s)	440, 567
TaaI	ACNGT	1 cut(s)	950
TaqI	TCGA	2 cut(s)	690, 945
TatI	WGTACW	1 cut(s)	631
TfiI	GAWTC	1 cut(s)	405
TseFI	GTSAC	1 cut(s)	297
Tsp45I	GTSAC	1 cut(s)	297
TspDTI	ATGAA	3 cut(s)	144, 730, 747
TspGWI	ACGGA	1 cut(s)	466
VpaK11BI	GGWCC	1 cut(s)	444
XapI	RAATTY	4 cut(s)	184, 454, 872, 995
XspI	CTAG	4 cut(s)	195, 402, 483, 554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.