MD06G1205100.v1.1

sulfotransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0006990
Physical Location & Seq
Reverse (-)
34037338 .. 34038387
1050 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1205100.v1.1.491

Sequence Viewer

Length: 1050 bp
ATGGCTCCAGGTGATCGAGAAGTAGAGGAAAACAAGATGATTGTTCCCGAAAATTTCGAAGAAATGCTATCAACTCTCCCGAAAGAAAAAAGCTGGGGAGCTGGTGGGTGTTTCTACAAATACCAAGGGTTTTGGTATTCCAGCGTTTGGCTTTTAGGGACCATTTGGGCACAATGCTTCAAGGCTAGGGACACTGACTTTCTCTTGGCATCGTCTCCAAAGTCGGGCACAACCTGGATGAAGGCCCTCATGATTGCTATCGTAAACCGAAAGCACCATGGATCATTATCATCATCATCTCATCCTCTGCTCATAAAAAATCCACATAACTGCGTACCCTTCTTAGAATTACGCGACCAAGAGCACATGATTGGATCCAATCCGATCACGTACCTAGACTCTCTTCCTGCAGCATCACCTAGGTTGCTTTCAACCCACATTCCATACTCATCGTTACCAAAATCCGTTTTGGCCGGTCGGATTGTGTACATTGCTAGGAACCCTAAAGATGTTTTTGTTTCCTTTTGGAAATTTTCGGAGCAGTTTGCGTCAAAAAATAACCAAAAACTTCATAAGTCACCAAGTATTTCTATGGAAGAGGCATTTGAGTTGTTTTGCAATGGGGTTTCAACTAATGGCCCCTTCTGGGATCATGTTTTAGGGTATTGGAAAGCGAGCACGGAACGCCCCGATGAGGTGCTGTTTGTGAAGTACGAGGACATGAAGAGGGACACAATGCACCATGTGAAGAAGCTGGCTGAGTTCATGGGGCATCCTTTTTCGTCGGAGGAAGAGAGGGAAGGTGTGCTGCAAGAAGTGATAGAGTTGTGCAGTTTTGAGAATTTGAGTAACTTGGAGGTGAACAAAAGTGGGACATTCCAAGTGCATGTGGCGTCCCAAACCGGGCAAAACCAGTTACTGGTGGACAACAGTGCCTTCTTCCGGCGAGGTGAGGTCGGAGACTCCAAGAACCATCTGACACCTGAGATGTTCGAGCGTCTTGACAAAATCACACAAGAAAAGTTGGGCACTTTTGGTTTGGAACTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sulfotransfer_1

Protein Analysis

350

Amino Acids

39.74

Weight (kDa)

6.13

Isoelectric Point (pI)

38.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sulfotransfer_1 PF00685 64 - 345 3.6e-70 Sulfotransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 147, 919
AccII CGCG 1 cut(s) 354
AclWI GGATC 4 cut(s) 289, 369, 382, 657
AcoI YGGCCR 1 cut(s) 471
AcsI RAATTY 3 cut(s) 52, 530, 841
AcyI GRCGYC 1 cut(s) 893
AdeI CACNNNGTG 1 cut(s) 745
AfaI GTAC 4 cut(s) 336, 392, 488, 713
AfiI CCNNNNNNNGG 7 cut(s) 147, 224, 646, 694, 903, 919, 942
AgsI TTSAA 3 cut(s) 181, 432, 630
AjnI CCWGG 2 cut(s) 7, 233
AluBI AGCT 3 cut(s) 93, 101, 754
AluI AGCT 3 cut(s) 93, 101, 754
Alw21I GWGCWC 2 cut(s) 366, 680
Alw26I GTCTC 2 cut(s) 219, 954
AlwI GGATC 4 cut(s) 289, 369, 382, 657
AlwNI CAGNNNCTG 1 cut(s) 919
AoxI GGCC 3 cut(s) 243, 471, 637
ApeKI GCWGC 2 cut(s) 410, 808
ApoI RAATTY 3 cut(s) 52, 530, 841
AspA2I CCTAGG 1 cut(s) 419
AspS9I GGNCC 3 cut(s) 159, 244, 638
AsuC2I CCSGG 1 cut(s) 904
AsuHPI GGTGA 5 cut(s) 23, 408, 570, 871, 962
AsuII TTCGAA 1 cut(s) 57
AvaII GGWCC 1 cut(s) 159
AvrII CCTAGG 1 cut(s) 419
BaeGI GKGCMC 3 cut(s) 172, 230, 1031
BamHI GGATCC 1 cut(s) 374
Bbv12I GWGCWC 2 cut(s) 366, 680
BbvI GCAGC 2 cut(s) 422, 795
BccI CCATC 1 cut(s) 981
BciT130I CCWGG 2 cut(s) 9, 235
BcnI CCSGG 1 cut(s) 904
BcoDI GTCTC 2 cut(s) 219, 954
BfaI CTAG 4 cut(s) 186, 395, 420, 495
BfmI CTRYAG 1 cut(s) 408
BisI GCNGC 2 cut(s) 411, 809
BlnI CCTAGG 1 cut(s) 419
BlsI GCNGC 2 cut(s) 412, 810
Bme1390I CCNGG 3 cut(s) 9, 235, 904
Bme18I GGWCC 1 cut(s) 159
BmgT120I GGNCC 3 cut(s) 159, 244, 638
BmiI GGNNCC 5 cut(s) 6, 160, 376, 500, 640
BmrFI CCNGG 3 cut(s) 9, 235, 904
BmsI GCATC 3 cut(s) 218, 422, 781
Bpu14I TTCGAA 1 cut(s) 57
BpuMI CCSGG 1 cut(s) 904
BsaAI YACGTR 1 cut(s) 390
BsaBI GATNNNNATC 2 cut(s) 257, 286
BsaHI GRCGYC 1 cut(s) 893
BsaJI CCNNGG 3 cut(s) 124, 277, 419
Bsc4I CCNNNNNNNGG 7 cut(s) 147, 224, 646, 694, 903, 919, 942
Bse118I RCCGGY 1 cut(s) 473
Bse1I ACTGG 2 cut(s) 913, 924
Bse3DI GCAATG 2 cut(s) 489, 625
Bse8I GATNNNNATC 2 cut(s) 257, 286
BseBI CCWGG 2 cut(s) 9, 235
BseDI CCNNGG 3 cut(s) 124, 277, 419
BseGI GGATG 3 cut(s) 243, 301, 772
BseJI GATNNNNATC 2 cut(s) 257, 286
BseLI CCNNNNNNNGG 7 cut(s) 147, 224, 646, 694, 903, 919, 942
BseMI GCAATG 2 cut(s) 489, 625
BseMII CTCAG 2 cut(s) 750, 975
BseNI ACTGG 2 cut(s) 913, 924
BseSI GKGCMC 3 cut(s) 172, 230, 1031
BseXI GCAGC 2 cut(s) 422, 795
BseYI CCCAGC 1 cut(s) 93
BsgI GTGCAG 1 cut(s) 850
Bsh1236I CGCG 1 cut(s) 354
Bsh1285I CGRYCG 1 cut(s) 478
BshFI GGCC 3 cut(s) 245, 473, 639
BsiEI CGRYCG 1 cut(s) 478
BsiHKAI GWGCWC 2 cut(s) 366, 680
BsiSI CCGG 3 cut(s) 474, 903, 943
BslFI GGGAC 5 cut(s) 172, 203, 743, 880, 886
BslI CCNNNNNNNGG 7 cut(s) 147, 224, 646, 694, 903, 919, 942
BsmAI GTCTC 2 cut(s) 219, 954
BsmBI CGTCTC 1 cut(s) 219
BsmFI GGGAC 5 cut(s) 172, 203, 743, 880, 886
BsnI GGCC 3 cut(s) 245, 473, 639
Bsp119I TTCGAA 1 cut(s) 57
Bsp1286I GDGCHC 5 cut(s) 172, 230, 366, 680, 1031
Bsp1407I TGTACA 1 cut(s) 486
Bsp143I GATC 5 cut(s) 13, 281, 374, 384, 649
Bsp19I CCATGG 1 cut(s) 277
BspANI GGCC 3 cut(s) 245, 473, 639
BspCNI CTCAG 2 cut(s) 751, 976
BspFNI CGCG 1 cut(s) 354
BspHI TCATGA 1 cut(s) 249
BspLI GGNNCC 5 cut(s) 6, 160, 376, 500, 640
BspMAI CTGCAG 1 cut(s) 412
BspPI GGATC 4 cut(s) 289, 369, 382, 657
BspT104I TTCGAA 1 cut(s) 57
BsrDI GCAATG 2 cut(s) 489, 625
BsrFI RCCGGY 1 cut(s) 473
BsrGI TGTACA 1 cut(s) 486
BsrI ACTGG 2 cut(s) 913, 924
BssAI RCCGGY 1 cut(s) 473
BssECI CCNNGG 3 cut(s) 124, 277, 419
BssMI GATC 5 cut(s) 13, 281, 374, 384, 649
BssNI GRCGYC 1 cut(s) 893
BssT1I CCWWGG 3 cut(s) 124, 277, 419
Bst2UI CCWGG 2 cut(s) 9, 235
Bst4CI ACNGT 1 cut(s) 932
Bst6I CTCTTC 4 cut(s) 408, 591, 719, 786
BstACI GRCGYC 1 cut(s) 893
BstAUI TGTACA 1 cut(s) 486
BstBAI YACGTR 1 cut(s) 390
BstBI TTCGAA 1 cut(s) 57
BstC8I GCNNGC 2 cut(s) 676, 756
BstDEI CTNAG 3 cut(s) 343, 759, 984
BstDSI CCRYGG 1 cut(s) 277
BstF5I GGATG 3 cut(s) 243, 301, 772
BstFNI CGCG 1 cut(s) 354
BstKTI GATC 5 cut(s) 16, 284, 377, 387, 652
BstMAI GTCTC 2 cut(s) 219, 954
BstMBI GATC 5 cut(s) 13, 281, 374, 384, 649
BstMCI CGRYCG 1 cut(s) 478
BstMWI GCNNNNNNNGC 1 cut(s) 684
BstNI CCWGG 2 cut(s) 9, 235
BstNSI RCATGY 1 cut(s) 890
BstSCI CCNGG 3 cut(s) 7, 233, 902
BstSFI CTRYAG 1 cut(s) 408
BstSLI GKGCMC 3 cut(s) 172, 230, 1031
BstUI CGCG 1 cut(s) 354
BstV1I GCAGC 2 cut(s) 422, 795
BstX2I RGATCY 1 cut(s) 374
BstYI RGATCY 1 cut(s) 374
BsuRI GGCC 3 cut(s) 245, 473, 639
BtgI CCRYGG 1 cut(s) 277
BtsCI GGATG 3 cut(s) 243, 301, 772
BtsIMutI CAGTG 2 cut(s) 192, 937
Cac8I GCNNGC 2 cut(s) 676, 756
CaiI CAGNNNCTG 1 cut(s) 919
CciI TCATGA 1 cut(s) 249
Cfr10I RCCGGY 1 cut(s) 473
Cfr13I GGNCC 3 cut(s) 159, 244, 638
CseI GACGC 3 cut(s) 537, 882, 986
Csp6I GTAC 4 cut(s) 335, 391, 487, 712
CviAII CATG 8 cut(s) 250, 278, 367, 653, 721, 743, 766, 887
CviQI GTAC 4 cut(s) 335, 391, 487, 712
DdeI CTNAG 3 cut(s) 343, 759, 984
DpnI GATC 5 cut(s) 15, 283, 376, 386, 651
DpnII GATC 5 cut(s) 13, 281, 374, 384, 649
DraIII CACNNNGTG 1 cut(s) 745
EaeI YGGCCR 1 cut(s) 471
Eam1104I CTCTTC 4 cut(s) 408, 591, 719, 786
EarI CTCTTC 4 cut(s) 408, 591, 719, 786
Eco130I CCWWGG 3 cut(s) 124, 277, 419
Eco47I GGWCC 1 cut(s) 159
EcoO109I RGGNCCY 1 cut(s) 244
EcoRII CCWGG 2 cut(s) 7, 233
EcoT14I CCWWGG 3 cut(s) 124, 277, 419
ErhI CCWWGG 3 cut(s) 124, 277, 419
Esp3I CGTCTC 1 cut(s) 219
FaeI CATG 8 cut(s) 253, 281, 370, 656, 724, 746, 769, 890
FaqI GGGAC 5 cut(s) 172, 203, 743, 880, 886
FatI CATG 8 cut(s) 249, 277, 366, 652, 720, 742, 765, 886
Fnu4HI GCNGC 2 cut(s) 411, 809
FokI GGATG 3 cut(s) 250, 288, 759
Fsp4HI GCNGC 2 cut(s) 411, 809
FspBI CTAG 4 cut(s) 186, 395, 420, 495
GluI GCNGC 2 cut(s) 411, 809
GsaI CCCAGC 1 cut(s) 97
HaeIII GGCC 3 cut(s) 245, 473, 639
HapII CCGG 3 cut(s) 474, 903, 943
HgaI GACGC 3 cut(s) 537, 882, 986
Hin1I GRCGYC 1 cut(s) 893
Hin1II CATG 8 cut(s) 253, 281, 370, 656, 724, 746, 769, 890
HinfI GANTC 2 cut(s) 398, 962
HpaII CCGG 3 cut(s) 474, 903, 943
HphI GGTGA 5 cut(s) 23, 408, 570, 871, 962
Hpy166II GTNNAC 4 cut(s) 265, 487, 862, 925
Hpy188I TCNGA 6 cut(s) 384, 480, 538, 787, 959, 978
Hpy188III TCNNGA 5 cut(s) 17, 47, 79, 250, 1001
Hpy8I GTNNAC 4 cut(s) 265, 487, 862, 925
Hpy99I CGWCG 1 cut(s) 787
HpyAV CCTTC 5 cut(s) 235, 349, 652, 794, 946
HpyCH4III ACNGT 1 cut(s) 932
HpyCH4IV ACGT 1 cut(s) 389
HpyCH4V TGCA 6 cut(s) 410, 618, 739, 811, 831, 886
HpyF10VI GCNNNNNNNGC 1 cut(s) 684
HpyF3I CTNAG 3 cut(s) 343, 759, 984
HpySE526I ACGT 1 cut(s) 389
Hsp92I GRCGYC 1 cut(s) 893
Hsp92II CATG 8 cut(s) 253, 281, 370, 656, 724, 746, 769, 890
Kzo9I GATC 5 cut(s) 13, 281, 374, 384, 649
LmnI GCTCC 3 cut(s) 10, 98, 538
Lsp1109I GCAGC 2 cut(s) 422, 795
LweI GCATC 3 cut(s) 218, 422, 781
MaeI CTAG 4 cut(s) 186, 395, 420, 495
MaeII ACGT 1 cut(s) 389
MaeIII GTNAC 4 cut(s) 453, 576, 848, 915
MalI GATC 5 cut(s) 15, 283, 376, 386, 651
MboI GATC 5 cut(s) 13, 281, 374, 384, 649
MboII GAAGA 7 cut(s) 71, 395, 608, 736, 760, 803, 931
MflI RGATCY 1 cut(s) 374
MhlI GDGCHC 5 cut(s) 172, 230, 366, 680, 1031
MluCI AATT 4 cut(s) 52, 347, 530, 841
MlyI GAGTC 2 cut(s) 392, 956
MmeI TCCRAC 3 cut(s) 458, 765, 937
MspI CCGG 3 cut(s) 474, 903, 943
MspR9I CCNGG 3 cut(s) 9, 235, 904
MvaI CCWGG 2 cut(s) 9, 235
MvnI CGCG 1 cut(s) 354
MwoI GCNNNNNNNGC 1 cut(s) 684
NciI CCSGG 1 cut(s) 904
NcoI CCATGG 1 cut(s) 277
NdeII GATC 5 cut(s) 13, 281, 374, 384, 649
NlaIII CATG 8 cut(s) 253, 281, 370, 656, 724, 746, 769, 890
NlaIV GGNNCC 5 cut(s) 6, 160, 376, 500, 640
NmuCI GTSAC 1 cut(s) 576
NspI RCATGY 1 cut(s) 890
NspV TTCGAA 1 cut(s) 57
PagI TCATGA 1 cut(s) 249
PflMI CCANNNNNTGG 2 cut(s) 147, 919
PkrI GCNGC 2 cut(s) 412, 810
PleI GAGTC 2 cut(s) 392, 956
PpsI GAGTC 2 cut(s) 392, 956
Ppu21I YACGTR 1 cut(s) 390
Psp6I CCWGG 2 cut(s) 7, 233
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 2 cut(s) 7, 233
PspN4I GGNNCC 5 cut(s) 6, 160, 376, 500, 640
PspPI GGNCC 3 cut(s) 159, 244, 638
PstI CTGCAG 1 cut(s) 412
PstNI CAGNNNCTG 1 cut(s) 919
PsuI RGATCY 1 cut(s) 374
RsaI GTAC 4 cut(s) 336, 392, 488, 713
RsaNI GTAC 4 cut(s) 335, 391, 487, 712
SatI GCNGC 2 cut(s) 411, 809
Sau3AI GATC 5 cut(s) 13, 281, 374, 384, 649
Sau96I GGNCC 3 cut(s) 159, 244, 638
SchI GAGTC 2 cut(s) 392, 956
ScrFI CCNGG 3 cut(s) 9, 235, 904
SduI GDGCHC 5 cut(s) 172, 230, 366, 680, 1031
SfaNI GCATC 3 cut(s) 218, 422, 781
SfcI CTRYAG 1 cut(s) 408
SfuI TTCGAA 1 cut(s) 57
SinI GGWCC 1 cut(s) 159
Sse9I AATT 4 cut(s) 52, 347, 530, 841
SspMI CTAG 4 cut(s) 186, 395, 420, 495
StyD4I CCNGG 3 cut(s) 7, 233, 902
StyI CCWWGG 3 cut(s) 124, 277, 419
TaaI ACNGT 1 cut(s) 932
TaiI ACGT 1 cut(s) 392
TaqI TCGA 3 cut(s) 16, 57, 993
TasI AATT 4 cut(s) 52, 347, 530, 841
TatI WGTACW 1 cut(s) 486
TscAI CASTG 2 cut(s) 199, 937
TseFI GTSAC 1 cut(s) 576
TseI GCWGC 2 cut(s) 410, 808
Tsp45I GTSAC 1 cut(s) 576
TspDTI ATGAA 4 cut(s) 254, 560, 737, 754
TspGWI ACGGA 2 cut(s) 454, 695
TspRI CASTG 2 cut(s) 199, 937
Van91I CCANNNNNTGG 2 cut(s) 147, 919
VpaK11BI GGWCC 1 cut(s) 159
XapI RAATTY 3 cut(s) 52, 530, 841
XceI RCATGY 1 cut(s) 890
XmaJI CCTAGG 1 cut(s) 419
XspI CTAG 4 cut(s) 186, 395, 420, 495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.