Rh7BG060200

Sulfotransferase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0006990
Physical Location & Seq
Reverse (-)
4025042 .. 4026139
1098 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG060200.1

Sequence Viewer

Length: 1098 bp
ATGTATATTAGATCCATGTTTTGGTTTAAAAAACCTCGATCACAATTATGTTCATTATTCAGTTCTTTCAGATATATGGCTTCTGCGTCTGTACTGGATCAAGAAGAAGAAGAAGAAGATGAAAACAAGATTAGTGGCATTCAAGATTTCCAAGAAATTATCTCAACCCTCCCTAAAGTGAGAGCCTGGGAAGGTGATCAGGATTACTACCAATACCAAGGGTTTTGGTACCCCCAGATTTTCGTTAAAGGTATCATTTGGGCACAAAAAAGTTTCACGGCTAGAGAAACTGACATTTTCTTGGCCACGTTTCCGAAGTGTGGTACAACATGGCTTAAGGCTCTCATGTCTGCTATCCAAAATCGAAATTGCCAATCCCAATCCCATCATCCATTGCTCACAAATAATCCTCATGATTGTGTACCCTTCCTAGAGTTGCAAGTTCACAAAGATAACCCAATCGCCTACCTAGAATCTCTTCCCTCACCTAGATTGCTCGCAACCCACATTTCATACCCATCATTACCAGACTCCATTTTGAGTAGTTCGGGTACACGGATTGTGTGCATTGCAAGGAACCCTAAAGATGTTCTTGTTTCCCTATGGGAGTCTACACAGAAAATAAGACAAAAAACTTCAAACGGACAACTTCCACCTCTTCCTATAGAAGAGGCATTTGAATTGTTTTGTAAAGGGCCTTCGATTGGAGGACCCTTTTGGGATCATGTTCTGGGTTATTGGGAAGCAAGCAAGGAAAACCCAAATAAGGTCTTATTTTTGAAGTATGAGGATATGAAGGACACAGAAAAATGTGTAAAGAGGTTGGCAGAGTTCATGCATCATCCATTTTCGTTAGAAGAAGGGAGACTCGGTGTTGTTCAAGAAGTAATAAACTTGGGCAGTTTCGAGAATTTGAAAAATTTGGAGGTGAACAAAAGTGGGACTGTCAATTTAACCTCTACGACGGTACTCGATAACGATATCTTCTTCCGAAAAGGCCAGGTTGGGGACTCCAAAAACCACCTAACACCTGAGATGCTCCAGCATCTTGACAAAATCACAGAGCACAAGTTGGGCAGTGCTGGTTTTAAGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sulfotransfer_1

Protein Analysis

365

Amino Acids

41.85

Weight (kDa)

6.15

Isoelectric Point (pI)

45.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sulfotransfer_1 PF00685 97 - 359 9.2e-66 Sulfotransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 228
AccB1I GGYRCC 1 cut(s) 228
AccB7I CCANNNNNTGG 1 cut(s) 21
AccI GTMKAC 1 cut(s) 611
AclWI GGATC 3 cut(s) 6, 105, 729
AcoI YGGCCR 1 cut(s) 303
AcsI RAATTY 2 cut(s) 910, 919
AfaI GTAC 6 cut(s) 93, 230, 325, 423, 553, 969
AfiI CCNNNNNNNGG 5 cut(s) 21, 320, 704, 766, 1006
AflII CTTAAG 1 cut(s) 335
AgsI TTSAA 6 cut(s) 143, 639, 680, 781, 881, 916
AjnI CCWGG 2 cut(s) 185, 999
Alw21I GWGCWC 1 cut(s) 1068
Alw26I GTCTC 1 cut(s) 859
AlwI GGATC 3 cut(s) 6, 105, 729
AoxI GGCC 3 cut(s) 303, 695, 997
ApoI RAATTY 2 cut(s) 910, 919
Asp700I GAANNNNTTC 1 cut(s) 477
Asp718I GGTACC 1 cut(s) 228
AspS9I GGNCC 2 cut(s) 695, 710
AsuHPI GGTGA 3 cut(s) 206, 477, 940
AvaII GGWCC 1 cut(s) 710
BaeGI GKGCMC 1 cut(s) 265
BalI TGGCCA 1 cut(s) 305
BanI GGYRCC 1 cut(s) 228
BarI GAAGNNNNNNTAC 2 cut(s) 682, 714
Bbv12I GWGCWC 1 cut(s) 1068
BccI CCATC 2 cut(s) 393, 526
BceAI ACGGC 1 cut(s) 294
BciT130I CCWGG 2 cut(s) 187, 1001
BclI TGATCA 1 cut(s) 196
BcoDI GTCTC 1 cut(s) 859
BfaI CTAG 4 cut(s) 282, 431, 470, 489
BfmI CTRYAG 1 cut(s) 663
BfrI CTTAAG 1 cut(s) 335
Bme1390I CCNGG 2 cut(s) 187, 1001
Bme18I GGWCC 1 cut(s) 710
BmgT120I GGNCC 2 cut(s) 695, 710
BmiI GGNNCC 3 cut(s) 230, 578, 712
BmrFI CCNGG 2 cut(s) 187, 1001
BmsI GCATC 3 cut(s) 847, 1026, 1054
BpmI CTGGAG 1 cut(s) 1025
BsaJI CCNNGG 2 cut(s) 186, 217
BsaXI ACNNNNNCTCC 2 cut(s) 856, 886
Bsc4I CCNNNNNNNGG 5 cut(s) 21, 320, 704, 766, 1006
Bse1I ACTGG 1 cut(s) 99
Bse3DI GCAATG 2 cut(s) 392, 567
BseBI CCWGG 2 cut(s) 187, 1001
BseDI CCNNGG 2 cut(s) 186, 217
BseGI GGATG 2 cut(s) 388, 841
BseLI CCNNNNNNNGG 5 cut(s) 21, 320, 704, 766, 1006
BseMI GCAATG 2 cut(s) 392, 567
BseMII CTCAG 1 cut(s) 1023
BseNI ACTGG 1 cut(s) 99
BseSI GKGCMC 1 cut(s) 265
BshFI GGCC 3 cut(s) 305, 697, 999
BshNI GGYRCC 1 cut(s) 228
BsiHKAI GWGCWC 1 cut(s) 1068
BslFI GGGAC 2 cut(s) 955, 1022
BslI CCNNNNNNNGG 5 cut(s) 21, 320, 704, 766, 1006
BsmAI GTCTC 1 cut(s) 859
BsmFI GGGAC 2 cut(s) 955, 1022
BsmI GAATGC 1 cut(s) 138
BsnI GGCC 3 cut(s) 305, 697, 999
Bsp1286I GDGCHC 2 cut(s) 265, 1068
Bsp143I GATC 5 cut(s) 11, 38, 97, 196, 721
BspANI GGCC 3 cut(s) 305, 697, 999
BspCNI CTCAG 1 cut(s) 1024
BspHI TCATGA 1 cut(s) 412
BspLI GGNNCC 3 cut(s) 230, 578, 712
BspPI GGATC 3 cut(s) 6, 105, 729
BspT107I GGYRCC 1 cut(s) 228
BspTI CTTAAG 1 cut(s) 335
BsrDI GCAATG 2 cut(s) 392, 567
BsrI ACTGG 1 cut(s) 99
BssECI CCNNGG 2 cut(s) 186, 217
BssMI GATC 5 cut(s) 11, 38, 97, 196, 721
BssT1I CCWWGG 1 cut(s) 217
Bst2UI CCWGG 2 cut(s) 187, 1001
Bst4CI ACNGT 2 cut(s) 946, 967
Bst6I CTCTTC 3 cut(s) 483, 663, 663
BstAFI CTTAAG 1 cut(s) 335
BstC8I GCNNGC 2 cut(s) 498, 748
BstDEI CTNAG 1 cut(s) 1032
BstF5I GGATG 2 cut(s) 388, 841
BstKTI GATC 5 cut(s) 14, 41, 100, 199, 724
BstMAI GTCTC 1 cut(s) 859
BstMBI GATC 5 cut(s) 11, 38, 97, 196, 721
BstNI CCWGG 2 cut(s) 187, 1001
BstSCI CCNGG 2 cut(s) 185, 999
BstSFI CTRYAG 1 cut(s) 663
BstSLI GKGCMC 1 cut(s) 265
BstX2I RGATCY 1 cut(s) 11
BstYI RGATCY 1 cut(s) 11
BsuRI GGCC 3 cut(s) 305, 697, 999
BtsCI GGATG 2 cut(s) 388, 841
BtsI GCAGTG 1 cut(s) 1084
BtsIMutI CAGTG 1 cut(s) 1084
Cac8I GCNNGC 2 cut(s) 498, 748
CciI TCATGA 1 cut(s) 412
Cfr13I GGNCC 2 cut(s) 695, 710
CseI GACGC 1 cut(s) 75
Csp6I GTAC 6 cut(s) 92, 229, 324, 422, 552, 968
CspCI CAANNNNNGTGG 2 cut(s) 115, 150
CviAII CATG 6 cut(s) 16, 330, 346, 413, 725, 835
CviJI RGCY 8 cut(s) 80, 185, 281, 305, 334, 341, 697, 999
CviKI_1 RGCY 8 cut(s) 80, 185, 281, 305, 334, 341, 697, 999
CviQI GTAC 6 cut(s) 92, 229, 324, 422, 552, 968
DdeI CTNAG 1 cut(s) 1032
DpnI GATC 5 cut(s) 13, 40, 99, 198, 723
DpnII GATC 5 cut(s) 11, 38, 97, 196, 721
DraI TTTAAA 1 cut(s) 28
EaeI YGGCCR 1 cut(s) 303
Eam1104I CTCTTC 3 cut(s) 483, 663, 663
EarI CTCTTC 3 cut(s) 483, 663, 663
Eco130I CCWWGG 1 cut(s) 217
Eco32I GATATC 1 cut(s) 982
Eco47I GGWCC 1 cut(s) 710
EcoO109I RGGNCCY 2 cut(s) 695, 710
EcoRII CCWGG 2 cut(s) 185, 999
EcoRV GATATC 1 cut(s) 982
EcoT14I CCWWGG 1 cut(s) 217
EcoT22I ATGCAT 1 cut(s) 840
ErhI CCWWGG 1 cut(s) 217
FaeI CATG 6 cut(s) 19, 333, 349, 416, 728, 838
FalI AAGNNNNNCTT 2 cut(s) 576, 608
FaqI GGGAC 2 cut(s) 955, 1022
FatI CATG 6 cut(s) 15, 329, 345, 412, 724, 834
FbaI TGATCA 1 cut(s) 196
FblI GTMKAC 1 cut(s) 611
FokI GGATG 2 cut(s) 375, 828
FspBI CTAG 4 cut(s) 282, 431, 470, 489
GsuI CTGGAG 1 cut(s) 1025
HaeIII GGCC 3 cut(s) 305, 697, 999
HgaI GACGC 1 cut(s) 75
Hin1II CATG 6 cut(s) 19, 333, 349, 416, 728, 838
HinfI GANTC 5 cut(s) 473, 530, 608, 867, 1010
HphI GGTGA 3 cut(s) 206, 477, 940
Hpy166II GTNNAC 5 cut(s) 422, 445, 554, 612, 931
Hpy188I TCNGA 3 cut(s) 71, 315, 992
Hpy188III TCNNGA 7 cut(s) 101, 143, 200, 413, 881, 907, 1049
Hpy8I GTNNAC 5 cut(s) 422, 445, 554, 612, 931
Hpy99I CGWCG 1 cut(s) 967
HpyAV CCTTC 5 cut(s) 185, 436, 708, 790, 854
HpyCH4III ACNGT 2 cut(s) 946, 967
HpyCH4IV ACGT 1 cut(s) 308
HpyCH4V TGCA 4 cut(s) 439, 567, 572, 838
HpyF3I CTNAG 1 cut(s) 1032
HpySE526I ACGT 1 cut(s) 308
Hsp92II CATG 6 cut(s) 19, 333, 349, 416, 728, 838
KpnI GGTACC 1 cut(s) 232
Ksp22I TGATCA 1 cut(s) 196
Kzo9I GATC 5 cut(s) 11, 38, 97, 196, 721
LmnI GCTCC 1 cut(s) 1044
LweI GCATC 3 cut(s) 847, 1026, 1054
MaeI CTAG 4 cut(s) 282, 431, 470, 489
MaeII ACGT 1 cut(s) 308
MalI GATC 5 cut(s) 13, 40, 99, 198, 723
MboI GATC 5 cut(s) 11, 38, 97, 196, 721
MflI RGATCY 1 cut(s) 11
MhlI GDGCHC 2 cut(s) 265, 1068
MlsI TGGCCA 1 cut(s) 305
MluCI AATT 7 cut(s) 44, 156, 367, 680, 910, 919, 949
MluNI TGGCCA 1 cut(s) 305
MlyI GAGTC 4 cut(s) 524, 617, 861, 1004
Mox20I TGGCCA 1 cut(s) 305
Mph1103I ATGCAT 1 cut(s) 840
MroXI GAANNNNTTC 1 cut(s) 477
MscI TGGCCA 1 cut(s) 305
MseI TTAA 5 cut(s) 27, 246, 336, 953, 1089
MslI CAYNNNNRTG 2 cut(s) 46, 417
Msp20I TGGCCA 1 cut(s) 305
MspCI CTTAAG 1 cut(s) 335
MspR9I CCNGG 2 cut(s) 187, 1001
Mva1269I GAATGC 1 cut(s) 138
MvaI CCWGG 2 cut(s) 187, 1001
NdeII GATC 5 cut(s) 11, 38, 97, 196, 721
NlaIII CATG 6 cut(s) 19, 333, 349, 416, 728, 838
NlaIV GGNNCC 3 cut(s) 230, 578, 712
NsiI ATGCAT 1 cut(s) 840
PagI TCATGA 1 cut(s) 412
PctI GAATGC 1 cut(s) 138
PdmI GAANNNNTTC 1 cut(s) 477
PfeI GAWTC 1 cut(s) 473
PflMI CCANNNNNTGG 1 cut(s) 21
PleI GAGTC 4 cut(s) 524, 616, 861, 1004
PpsI GAGTC 4 cut(s) 524, 616, 861, 1004
PpuMI RGGWCCY 1 cut(s) 710
Psp5II RGGWCCY 1 cut(s) 710
Psp6I CCWGG 2 cut(s) 185, 999
PspGI CCWGG 2 cut(s) 185, 999
PspN4I GGNNCC 3 cut(s) 230, 578, 712
PspPI GGNCC 2 cut(s) 695, 710
PspPPI RGGWCCY 1 cut(s) 710
PsuI RGATCY 1 cut(s) 11
RsaI GTAC 6 cut(s) 93, 230, 325, 423, 553, 969
RsaNI GTAC 6 cut(s) 92, 229, 324, 422, 552, 968
RseI CAYNNNNRTG 2 cut(s) 46, 417
SaqAI TTAA 5 cut(s) 27, 246, 336, 953, 1089
Sau3AI GATC 5 cut(s) 11, 38, 97, 196, 721
Sau96I GGNCC 2 cut(s) 695, 710
SchI GAGTC 4 cut(s) 524, 617, 861, 1004
ScrFI CCNGG 2 cut(s) 187, 1001
SduI GDGCHC 2 cut(s) 265, 1068
SfaNI GCATC 3 cut(s) 847, 1026, 1054
SfcI CTRYAG 1 cut(s) 663
SinI GGWCC 1 cut(s) 710
SmiMI CAYNNNNRTG 2 cut(s) 46, 417
SmlI CTYRAG 1 cut(s) 335
SmoI CTYRAG 1 cut(s) 335
Sse9I AATT 7 cut(s) 44, 156, 367, 680, 910, 919, 949
SspMI CTAG 4 cut(s) 282, 431, 470, 489
StyD4I CCNGG 2 cut(s) 185, 999
StyI CCWWGG 1 cut(s) 217
TaaI ACNGT 2 cut(s) 946, 967
TaiI ACGT 1 cut(s) 311
TaqI TCGA 5 cut(s) 37, 364, 701, 906, 972
TasI AATT 7 cut(s) 44, 156, 367, 680, 910, 919, 949
TatI WGTACW 1 cut(s) 91
TfiI GAWTC 1 cut(s) 473
Tru1I TTAA 5 cut(s) 27, 246, 336, 953, 1089
Tru9I TTAA 5 cut(s) 27, 246, 336, 953, 1089
TscAI CASTG 1 cut(s) 1084
TspDTI ATGAA 5 cut(s) 42, 135, 501, 809, 823
TspGWI ACGGA 2 cut(s) 571, 657
TspRI CASTG 1 cut(s) 1084
Van91I CCANNNNNTGG 1 cut(s) 21
Vha464I CTTAAG 1 cut(s) 335
VpaK11BI GGWCC 1 cut(s) 710
XapI RAATTY 2 cut(s) 910, 919
XmiI GTMKAC 1 cut(s) 611
XmnI GAANNNNTTC 1 cut(s) 477
XspI CTAG 4 cut(s) 282, 431, 470, 489
Zsp2I ATGCAT 1 cut(s) 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.