Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002968

Physical Location & Seq

Genomic Coordinates Reverse (-)

10670129 .. 10672836

Gene Structure 2708 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G30290.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2421 bp

ATGTTGAGTTTAAGGGTTAATCGGCTTCTTCGTAAACCCTTAATCCGATTTTCACCTTGCATAAGCTCTAATGGCGAAGCATCTTTCTCGACATCTTCGTCGAAACATCCTCATGGTCCAGAGATAGAAGGAGATTCTTCTAGTCAAGAAGATGACCACTTTGGAGAGTTTAGGCAATTGGGTTTCGGAAAGTCTTCAGCTTTGAATGCTACGAGTGTTGGTGATCCTGAATTCGGAGAAATTCGAAACCCTAGGTTCAATGAGATTGATGAATTAGGAGAAGATGACGATGATGAAGAAGGAAATGTAACAAGTGGCGACGAACTTGATGATGATAATGATGGTTTTGCTGTTCTGAAATCGATCCCACAATCGAGAGAAGAGGCTGGTAGATTCGATGTCGAAGAAGATGAATCTAGACATCCTTTGGTGAGAGAGGTAGGTAGATTGATTGGCCTCAGGTCATCTTGGAACCCGAAGCATGAAGGTCAGATGAGGAATCTTTTAAGGAGCCTTAAACCATCACAAGTATGCGCTGTTTTACGCTCACAAGACGATGAACGGGTTGCTCTTAAGTTCTTCTACTGGGCTGATCGTCAATGGCGGTATCGCCATGACCCCATGGTGTATTACTCGATGCTTGAGGTTCTTAGTAAGACTAAACTGTGTCAAGGTTCTAGGAGAGTTCTCGTTCTGATGAAGCGTAGAGGTATATATCGAACCCCTGAAGCGTTTTCACGTGTAATGGTATCATATAGTAGGGCAGGTCAGCTGAGAGATGCATTGAAAGTGTTGACTCTTATGCAGAGAGCTGGAGTTGAACCTAACTTGTTGATTTGCAATACGACTATTGATGTTTTCGTTAGAGCGAATAGGTTGGAGAAAGCTTTACGGTTTCTAGAACGTATGCAGGTTGTTGGTATAGTGCCAAATGTAGTGACTTATAATTGTATGATCAGAGGTTATTGTGACTTGCATCGAGTTGAGGAGGCAATTGAACTACTAGAGGATATGCATAGTAAAGGATGTTTGCCGGATAAAGTTAGTTACTATACCATAATGGGCTATCTTTGTAAAGAAAAACGGATTGTGGAAGTGAGAGACTTGATGAAGAAAATGGCGAAAGAGCATGGTTTGGTGCCGGATCAAGTCACCTACAATACTCTAATTCATATGCTCACTAAACATGATCATGCGGATGAGGCTCTTTGGTTTCTAAAAGATGCTCAAGAAAAAGGTTTTCGGATTGATAAGCTGGGTTATAGTGCCATAGTTCATGCATTATGCAAAGAGGGAAGAATGTCTGAGGCGAAAGATCTCATTAACGAAATGTTGTCAAAGGGGCACTGCCCTCCTGATGTAGTAACTTATACTGCAGTTGTCAATGGCTTCTGTCGTTTGGGTGAAGTGGACAAAGCCAAAAAGCTACTTCAGGTTATGCACACACATGGACATAAACCAAATACTGTGTCATACACAGCTCTGTTAAATGGGATGTGCCGAACTGGGAAATCGTTAGAGGCAAGAGAAATGATGAACATGAGCGAAGAGCACTGGTGGAGTCCAAATTCTATTACTTATAGCGTAATTATGCATGGGTTGCGAAGGGAAGGGAAATTGTCTGAGGCCTGTGATGTGGTGAGAGAGATGGTACTAAAAGGGTTTTTCCCAGGCCCAGTTGAAATTAACTTGTTGCTCCAGAGTCTTTGCCGGGATGGGAGAACACACGAGGCCAGAAAATTCATGGAGGAGTGTCTGAACAAGGGTTGTGCTATTAATGTTGTGAATTTTACTACAGTGATTCATGGTTTTTGTCAGAACGATGAGCTAGATGCTGCTCTATCCGTGCTTGATGACATGTACCTGATCAACAAACACGCGGATGTCTTCACCTATACTACTTTAGTTGATACATTGGGGAAAAAAGGTAGAATAGCAGAAGCAACAGAACTTATGAAGAAGATGCTTCATAAAGGAATTGATCCTACCCCTGTTACATACAGAACTGTCATCCATCGATACTGCCAAATGGGAAAGGTTGATGATCTCGTGGCTATACTGGAGAAGATGATATCGAGGCAGAAATGCAGGACAATTTATAATCAAGTCATTGAGAAGCTCTGTGTTCTGGGAAAGCTCGAGGAGGCAGATACACTTTTGGGAAAAGTTCTGAGGACAGCTTCAAGATCTGATGCTAAGACATGTTATGCGCTTATGGAAGGCTATCTTAAGAAAGGTGTACCTCTGTCAGCATATAAAGTAGCTTGTCGGATGTTTAACCGCAATCTGATACCTGATGTTAAGATGTGTGAGAAGCTTAGCAAGAGACTGGTTCTGAAAGGTAAAGTTGACGAGGCAGATAAGCTAATGTTACGTTTGGTTGAGCGAGGTCATATTTCACCCCAGTCCTTAAAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

806

Amino Acids

91.81

Weight (kDa)

8.36

Isoelectric Point (pI)

37.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	257 - 348	5.9e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	264 - 322	4.7e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	275 - 324	4.2e-13	PPR repeat family
PPR_3	PF13812	300 - 357	2.6e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	307 - 338	9.7e-12	PPR repeat
PPR_2	PF13041	310 - 351	9.9e-15	PPR repeat family
PPR	PF01535	313 - 343	5e-09	PPR repeat
PPR_2	PF13041	345 - 394	8.3e-10	PPR repeat family
PPR_long	PF17177	369 - 531	2.3e-10	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	381 - 430	4.3e-09	PPR repeat family
PPR_1	PF12854	412 - 444	4.6e-06	PPR repeat
PPR_2	PF13041	420 - 466	1.2e-12	PPR repeat family
PPR	PF01535	421 - 448	4.5e-06	PPR repeat
PPR_1	PF12854	450 - 480	1.2e-11	PPR repeat
PPR_2	PF13041	452 - 501	1.4e-15	PPR repeat family
PPR	PF01535	455 - 484	2.9e-06	PPR repeat
PPR_3	PF13812	475 - 532	2.9e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	484 - 513	3.8e-06	PPR repeat
PPR_1	PF12854	521 - 551	5.3e-06	PPR repeat
PPR_1	PF12854	588 - 620	1.4e-08	PPR repeat
PPR_2	PF13041	593 - 639	3.3e-09	PPR repeat family
PPR_1	PF12854	627 - 655	1.7e-07	PPR repeat
PPR_2	PF13041	628 - 676	5.7e-12	PPR repeat family
PPR_1	PF12854	658 - 690	5.7e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30290 AT1G30290
fragaria_vesca	FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050
malus_domestica	MD10G1258300.v1.1
prunus_persica	Prupe.4G085500_v2.0.a1 Prupe.4G085500_v2.0.a1
pyrus_communis	pycom05g26000 pycom10g21460
rosa_chinensis	RchiOBHm_Chr3g0490541 RchiOBHm_Chr3g0490551 RchiOBHm_Chr5g0014911
rosa_laevigata	RLG00000022885 RLG00000032150
rosa_multiflora	Rmu_sc0003862.1_g000007 Rmu_sc0013610.1_g000002
rosa_roxburghii	Rroxscaffold_1G00061660 Rroxscaffold_6G00393420
rosa_rugosa	Rorug03G0243900 Rorug05G0021400
rosa_samantha	Rh3AG293300 Rh3AG293400 Rh3BG329800 Rh3CG327300 Rh3CG327400 Rh3DG326700 Rh5AG117100 Rh5BG114100 Rh5CG125600 Rh5DG113500
rosa_wichuraiana	Rw3G025970 Rw5G010080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	945, 2100
AasI	GACNNNNNNGTC	1 cut(s)	97
Acc36I	ACCTGC	2 cut(s)	755, 901
AccB1I	GGYRCC	1 cut(s)	1138
AccII	CGCG	1 cut(s)	1880
AciI	CCGC	4 cut(s)	604, 1196, 1880, 2281
AclWI	GGATC	4 cut(s)	218, 358, 1152, 1976
AcsI	RAATTY	5 cut(s)	230, 240, 1567, 1739, 1786
AcuI	CTGAAG	3 cut(s)	180, 747, 1415
AcvI	CACGTG	1 cut(s)	740
AfaI	GTAC	3 cut(s)	1653, 1862, 2241
AfiI	CCNNNNNNNGG	1 cut(s)	233
AflII	CTTAAG	2 cut(s)	572, 2228
AflIII	ACRYGT	3 cut(s)	739, 1857, 2201
AgsI	TTSAA	7 cut(s)	205, 259, 787, 821, 998, 1682, 2184
AjnI	CCWGG	1 cut(s)	1669
Alw21I	GWGCWC	1 cut(s)	1554
Alw26I	GTCTC	2 cut(s)	1095, 2320
AlwI	GGATC	4 cut(s)	218, 358, 1152, 1976
Ama87I	CYCGRG	1 cut(s)	2138
AoxI	GGCC	4 cut(s)	454, 1626, 1672, 1731
ApeKI	GCWGC	1 cut(s)	1835
ApoI	RAATTY	5 cut(s)	230, 240, 1567, 1739, 1786
ArsI	GACNNNNNNTTYG	2 cut(s)	1454, 1486
AseI	ATTAAT	1 cut(s)	1776
Asp700I	GAANNNNTTC	1 cut(s)	193
AspA2I	CCTAGG	1 cut(s)	251
AspLEI	GCGC	2 cut(s)	536, 2212
AspS9I	GGNCC	2 cut(s)	116, 1673
AsuC2I	CCSGG	1 cut(s)	1712
AsuHPI	GGTGA	8 cut(s)	45, 233, 442, 1144, 1415, 1651, 1882, 2391
AsuII	TTCGAA	1 cut(s)	244
AvaI	CYCGRG	1 cut(s)	2138
AvaII	GGWCC	1 cut(s)	116
AvrII	CCTAGG	1 cut(s)	251
AxyI	CCTNAGG	1 cut(s)	458
BaeGI	GKGCMC	1 cut(s)	1347
BanI	GGYRCC	1 cut(s)	1138
BauI	CACGAG	2 cut(s)	1727, 2048
BbrPI	CACGTG	1 cut(s)	740
BbsI	GAAGAC	2 cut(s)	186, 1879
Bbv12I	GWGCWC	1 cut(s)	1554
BbvI	GCAGC	1 cut(s)	1822
BccI	CCATC	5 cut(s)	335, 529, 1642, 1709, 2022
BcgI	CGANNNNNNTGC	2 cut(s)	69, 103
BciT130I	CCWGG	1 cut(s)	1671
BclI	TGATCA	3 cut(s)	954, 1189, 1866
BcnI	CCSGG	1 cut(s)	1712
BcoDI	GTCTC	2 cut(s)	1095, 2320
BfaI	CTAG	7 cut(s)	141, 252, 417, 678, 899, 1004, 1829
BfmI	CTRYAG	2 cut(s)	1374, 1794
BfrI	CTTAAG	2 cut(s)	572, 2228
BfuAI	ACCTGC	2 cut(s)	755, 901
BglII	AGATCT	2 cut(s)	1315, 2186
BisI	GCNGC	1 cut(s)	1836
BlnI	CCTAGG	1 cut(s)	251
BlpI	GCTNAGC	1 cut(s)	2318
BlsI	GCNGC	1 cut(s)	1837
Bme1390I	CCNGG	2 cut(s)	1671, 1712
Bme18I	GGWCC	1 cut(s)	116
BmeT110I	CYCGRG	1 cut(s)	2138
BmgT120I	GGNCC	2 cut(s)	116, 1673
BmiI	GGNNCC	3 cut(s)	473, 512, 1140
BmrFI	CCNGG	2 cut(s)	1671, 1712
BmrI	ACTGGG	4 cut(s)	595, 1515, 1670, 2398
BmsI	GCATC	8 cut(s)	89, 627, 769, 985, 1213, 1822, 1953, 2182
BmuI	ACTGGG	4 cut(s)	595, 1515, 1670, 2398
BpiI	GAAGAC	2 cut(s)	186, 1879
BpmI	CTGGAG	3 cut(s)	834, 1682, 2081
Bpu1102I	GCTNAGC	1 cut(s)	2318
Bpu14I	TTCGAA	1 cut(s)	244
BpuEI	CTTGAG	2 cut(s)	662, 1212
BpuMI	CCSGG	1 cut(s)	1712
Bsa29I	ATCGAT	2 cut(s)	362, 2017
BsaAI	YACGTR	1 cut(s)	740
BsaJI	CCNNGG	3 cut(s)	251, 621, 1669
Bsc4I	CCNNNNNNNGG	1 cut(s)	233
Bse1I	ACTGG	7 cut(s)	590, 1510, 1559, 1676, 2064, 2334, 2404
Bse21I	CCTNAGG	1 cut(s)	458
BseBI	CCWGG	1 cut(s)	1671
BseCI	ATCGAT	2 cut(s)	362, 2017
BseDI	CCNNGG	3 cut(s)	251, 621, 1669
BseGI	GGATG	9 cut(s)	106, 421, 1031, 1204, 1500, 1720, 1888, 2010, 2277
BseLI	CCNNNNNNNGG	1 cut(s)	233
BseMII	CTCAG	5 cut(s)	472, 764, 1296, 1614, 2162
BseNI	ACTGG	7 cut(s)	590, 1510, 1559, 1676, 2064, 2334, 2404
BseRI	GAGGAG	3 cut(s)	1001, 1763, 2156
BseSI	GKGCMC	1 cut(s)	1347
BseXI	GCAGC	1 cut(s)	1822
BseYI	CCCAGC	1 cut(s)	1255
Bsh1236I	CGCG	1 cut(s)	1880
BshFI	GGCC	4 cut(s)	456, 1628, 1674, 1733
BshNI	GGYRCC	1 cut(s)	1138
BshVI	ATCGAT	2 cut(s)	362, 2017
BsiHKAI	GWGCWC	1 cut(s)	1554
BsiHKCI	CYCGRG	1 cut(s)	2138
BsiSI	CCGG	3 cut(s)	1034, 1142, 1711
BslI	CCNNNNNNNGG	1 cut(s)	233
BsmAI	GTCTC	2 cut(s)	1095, 2320
BsmI	GAATGC	1 cut(s)	211
BsnI	GGCC	4 cut(s)	456, 1628, 1674, 1733
BsoBI	CYCGRG	1 cut(s)	2138
Bsp119I	TTCGAA	1 cut(s)	244
Bsp1286I	GDGCHC	2 cut(s)	1347, 1554
Bsp1720I	GCTNAGC	1 cut(s)	2318
Bsp19I	CCATGG	1 cut(s)	621
BspACI	CCGC	4 cut(s)	604, 1196, 1880, 2281
BspANI	GGCC	4 cut(s)	456, 1628, 1674, 1733
BspCNI	CTCAG	5 cut(s)	471, 765, 1297, 1615, 2163
BspDI	ATCGAT	2 cut(s)	362, 2017
BspFNI	CGCG	1 cut(s)	1880
BspLI	GGNNCC	3 cut(s)	473, 512, 1140
BspMAI	CTGCAG	1 cut(s)	1378
BspMI	ACCTGC	2 cut(s)	755, 901
BspPI	GGATC	4 cut(s)	218, 358, 1152, 1976
BspQI	GCTCTTC	1 cut(s)	1542
BspT104I	TTCGAA	1 cut(s)	244
BspT107I	GGYRCC	1 cut(s)	1138
BspTI	CTTAAG	2 cut(s)	572, 2228
BsrI	ACTGG	7 cut(s)	590, 1510, 1559, 1676, 2064, 2334, 2404
BssECI	CCNNGG	3 cut(s)	251, 621, 1669
BssSI	CACGAG	2 cut(s)	1727, 2048
BssT1I	CCWWGG	2 cut(s)	251, 621
Bst2BI	CACGAG	2 cut(s)	1727, 2048
Bst2UI	CCWGG	1 cut(s)	1671
Bst4CI	ACNGT	6 cut(s)	666, 894, 1468, 1798, 2008, 2418
Bst6I	CTCTTC	2 cut(s)	375, 1542
BstAFI	CTTAAG	2 cut(s)	572, 2228
BstAPI	GCANNNNNTGC	1 cut(s)	1600
BstBAI	YACGTR	1 cut(s)	740
BstBI	TTCGAA	1 cut(s)	244
BstDEI	CTNAG	8 cut(s)	458, 650, 773, 1305, 1623, 2171, 2196, 2318
BstDSI	CCRYGG	1 cut(s)	621
BstF5I	GGATG	9 cut(s)	106, 421, 1031, 1204, 1500, 1720, 1888, 2010, 2277
BstFNI	CGCG	1 cut(s)	1880
BstHHI	GCGC	2 cut(s)	536, 2212
BstMAI	GTCTC	2 cut(s)	1095, 2320
BstMWI	GCNNNNNNNGC	4 cut(s)	72, 206, 1202, 1600
BstNI	CCWGG	1 cut(s)	1671
BstNSI	RCATGY	2 cut(s)	1861, 2205
BstSCI	CCNGG	2 cut(s)	1669, 1710
BstSFI	CTRYAG	2 cut(s)	1374, 1794
BstSLI	GKGCMC	1 cut(s)	1347
BstUI	CGCG	1 cut(s)	1880
BstV1I	GCAGC	1 cut(s)	1822
BstV2I	GAAGAC	2 cut(s)	186, 1879
BstX2I	RGATCY	2 cut(s)	1315, 2186
BstYI	RGATCY	2 cut(s)	1315, 2186
Bsu15I	ATCGAT	2 cut(s)	362, 2017
Bsu36I	CCTNAGG	1 cut(s)	458
BsuRI	GGCC	4 cut(s)	456, 1628, 1674, 1733
BsuTUI	ATCGAT	2 cut(s)	362, 2017
BtgI	CCRYGG	1 cut(s)	621
BtsCI	GGATG	9 cut(s)	106, 421, 1031, 1204, 1500, 1720, 1888, 2010, 2277
BtsI	GCAGTG	1 cut(s)	1345
BtsIMutI	CAGTG	3 cut(s)	1345, 1552, 1803
BveI	ACCTGC	2 cut(s)	755, 901
CfoI	GCGC	2 cut(s)	536, 2212
Cfr13I	GGNCC	2 cut(s)	116, 1673
ClaI	ATCGAT	2 cut(s)	362, 2017
Csp6I	GTAC	3 cut(s)	1652, 1861, 2240
CviQI	GTAC	3 cut(s)	1652, 1861, 2240
DdeI	CTNAG	8 cut(s)	458, 650, 773, 1305, 1623, 2171, 2196, 2318
DrdI	GACNNNNNNGTC	1 cut(s)	97
DseDI	GACNNNNNNGTC	1 cut(s)	97
Eam1104I	CTCTTC	2 cut(s)	375, 1542
EarI	CTCTTC	2 cut(s)	375, 1542
Eco130I	CCWWGG	2 cut(s)	251, 621
Eco147I	AGGCCT	1 cut(s)	1628
Eco32I	GATATC	1 cut(s)	2073
Eco47I	GGWCC	1 cut(s)	116
Eco57I	CTGAAG	3 cut(s)	180, 747, 1415
Eco72I	CACGTG	1 cut(s)	740
Eco81I	CCTNAGG	1 cut(s)	458
Eco88I	CYCGRG	1 cut(s)	2138
EcoRI	GAATTC	1 cut(s)	230
EcoRII	CCWGG	1 cut(s)	1669
EcoRV	GATATC	1 cut(s)	2073
EcoT14I	CCWWGG	2 cut(s)	251, 621
EcoT22I	ATGCAT	4 cut(s)	784, 1017, 1282, 1596
ErhI	CCWWGG	2 cut(s)	251, 621
FalI	AAGNNNNNCTT	2 cut(s)	2211, 2243
FauNDI	CATATG	1 cut(s)	1173
FbaI	TGATCA	3 cut(s)	954, 1189, 1866
Fnu4HI	GCNGC	1 cut(s)	1836
FokI	GGATG	9 cut(s)	93, 408, 1038, 1211, 1507, 1727, 1895, 1997, 2284
Fsp4HI	GCNGC	1 cut(s)	1836
FspBI	CTAG	7 cut(s)	141, 252, 417, 678, 899, 1004, 1829
GlaI	GCGC	2 cut(s)	535, 2211
GluI	GCNGC	1 cut(s)	1836
GsaI	CCCAGC	1 cut(s)	1259
GsuI	CTGGAG	3 cut(s)	834, 1682, 2081
HaeIII	GGCC	4 cut(s)	456, 1628, 1674, 1733
HapII	CCGG	3 cut(s)	1034, 1142, 1711
HhaI	GCGC	2 cut(s)	536, 2212
Hin6I	GCGC	2 cut(s)	534, 2210
HinP1I	GCGC	2 cut(s)	534, 2210
HincII	GTYRAC	2 cut(s)	795, 2350
HindII	GTYRAC	2 cut(s)	795, 2350
HindIII	AAGCTT	2 cut(s)	885, 2315
HinfI	GANTC	8 cut(s)	134, 393, 413, 499, 796, 1561, 1702, 1801
HpaII	CCGG	3 cut(s)	1034, 1142, 1711
HphI	GGTGA	8 cut(s)	45, 233, 442, 1144, 1415, 1651, 1882, 2391
Hpy166II	GTNNAC	5 cut(s)	35, 795, 1411, 2240, 2350
Hpy8I	GTNNAC	5 cut(s)	35, 795, 1411, 2240, 2350
Hpy99I	CGWCG	2 cut(s)	103, 323
HpyAV	CCTTC	6 cut(s)	122, 293, 479, 1599, 1604, 2213
HpyCH4III	ACNGT	6 cut(s)	666, 894, 1468, 1798, 2008, 2418
HpyCH4IV	ACGT	3 cut(s)	739, 904, 2374
HpyF10VI	GCNNNNNNNGC	4 cut(s)	72, 206, 1202, 1600
HpyF3I	CTNAG	8 cut(s)	458, 650, 773, 1305, 1623, 2171, 2196, 2318
HpySE526I	ACGT	3 cut(s)	739, 904, 2374
HspAI	GCGC	2 cut(s)	534, 2210
Ksp22I	TGATCA	3 cut(s)	954, 1189, 1866
LguI	GCTCTTC	1 cut(s)	1542
LmnI	GCTCC	2 cut(s)	510, 1701
Lsp1109I	GCAGC	1 cut(s)	1822
LweI	GCATC	8 cut(s)	89, 627, 769, 985, 1213, 1822, 1953, 2182
MaeI	CTAG	7 cut(s)	141, 252, 417, 678, 899, 1004, 1829
MaeII	ACGT	3 cut(s)	739, 904, 2374
MaeIII	GTNAC	8 cut(s)	307, 937, 968, 1046, 1150, 1363, 1993, 2370
MfeI	CAATTG	2 cut(s)	176, 993
MflI	RGATCY	2 cut(s)	1315, 2186
MhlI	GDGCHC	2 cut(s)	1347, 1554
MlyI	GAGTC	3 cut(s)	790, 1570, 1711
MmeI	TCCRAC	2 cut(s)	858, 2249
Mph1103I	ATGCAT	4 cut(s)	784, 1017, 1282, 1596
MroXI	GAANNNNTTC	1 cut(s)	193
MslI	CAYNNNNRTG	6 cut(s)	111, 529, 1191, 1197, 1446, 1881
MspA1I	CMGCKG	1 cut(s)	772
MspCI	CTTAAG	2 cut(s)	572, 2228
MspI	CCGG	3 cut(s)	1034, 1142, 1711
MspR9I	CCNGG	2 cut(s)	1671, 1712
MunI	CAATTG	2 cut(s)	176, 993
Mva1269I	GAATGC	1 cut(s)	211
MvaI	CCWGG	1 cut(s)	1671
MvnI	CGCG	1 cut(s)	1880
MwoI	GCNNNNNNNGC	4 cut(s)	72, 206, 1202, 1600
NciI	CCSGG	1 cut(s)	1712
NcoI	CCATGG	1 cut(s)	621
NdeI	CATATG	1 cut(s)	1173
NlaIV	GGNNCC	3 cut(s)	473, 512, 1140
NmuCI	GTSAC	3 cut(s)	937, 968, 1150
NsiI	ATGCAT	4 cut(s)	784, 1017, 1282, 1596
NspI	RCATGY	2 cut(s)	1861, 2205
NspV	TTCGAA	1 cut(s)	244
PaeR7I	CTCGAG	1 cut(s)	2138
PceI	AGGCCT	1 cut(s)	1628
PciI	ACATGT	2 cut(s)	1857, 2201
PciSI	GCTCTTC	1 cut(s)	1542
PcsI	WCGNNNNNNNCGW	2 cut(s)	28, 95
PctI	GAATGC	1 cut(s)	211
PdmI	GAANNNNTTC	1 cut(s)	193
PfeI	GAWTC	5 cut(s)	134, 393, 413, 499, 1801
PkrI	GCNGC	1 cut(s)	1837
PleI	GAGTC	3 cut(s)	790, 1569, 1710
PmaCI	CACGTG	1 cut(s)	740
PmlI	CACGTG	1 cut(s)	740
PpsI	GAGTC	3 cut(s)	790, 1569, 1710
Ppu21I	YACGTR	1 cut(s)	740
PscI	ACATGT	2 cut(s)	1857, 2201
PshBI	ATTAAT	1 cut(s)	1776
PsiI	TTATAA	2 cut(s)	945, 2100
Psp6I	CCWGG	1 cut(s)	1669
PspCI	CACGTG	1 cut(s)	740
PspFI	CCCAGC	1 cut(s)	1255
PspGI	CCWGG	1 cut(s)	1669
PspN4I	GGNNCC	3 cut(s)	473, 512, 1140
PspPI	GGNCC	2 cut(s)	116, 1673
PspXI	VCTCGAGB	1 cut(s)	2138
PstI	CTGCAG	1 cut(s)	1378
PsuI	RGATCY	2 cut(s)	1315, 2186
PvuII	CAGCTG	1 cut(s)	772
RsaI	GTAC	3 cut(s)	1653, 1862, 2241
RsaNI	GTAC	3 cut(s)	1652, 1861, 2240
RseI	CAYNNNNRTG	6 cut(s)	111, 529, 1191, 1197, 1446, 1881
SapI	GCTCTTC	1 cut(s)	1542
SatI	GCNGC	1 cut(s)	1836
Sau96I	GGNCC	2 cut(s)	116, 1673
SchI	GAGTC	3 cut(s)	790, 1570, 1711
ScrFI	CCNGG	2 cut(s)	1671, 1712
SduI	GDGCHC	2 cut(s)	1347, 1554
SfaNI	GCATC	8 cut(s)	89, 627, 769, 985, 1213, 1822, 1953, 2182
SfcI	CTRYAG	2 cut(s)	1374, 1794
Sfr274I	CTCGAG	1 cut(s)	2138
SfuI	TTCGAA	1 cut(s)	244
SinI	GGWCC	1 cut(s)	116
SlaI	CTCGAG	1 cut(s)	2138
SmiMI	CAYNNNNRTG	6 cut(s)	111, 529, 1191, 1197, 1446, 1881
SmlI	CTYRAG	5 cut(s)	572, 641, 1227, 2138, 2228
SmoI	CTYRAG	5 cut(s)	572, 641, 1227, 2138, 2228
SseBI	AGGCCT	1 cut(s)	1628
SsiI	CCGC	4 cut(s)	604, 1196, 1880, 2281
SspMI	CTAG	7 cut(s)	141, 252, 417, 678, 899, 1004, 1829
StuI	AGGCCT	1 cut(s)	1628
StyD4I	CCNGG	2 cut(s)	1669, 1710
StyI	CCWWGG	2 cut(s)	251, 621
TaaI	ACNGT	6 cut(s)	666, 894, 1468, 1798, 2008, 2418
TaiI	ACGT	3 cut(s)	742, 907, 2377
TfiI	GAWTC	5 cut(s)	134, 393, 413, 499, 1801
TscAI	CASTG	3 cut(s)	1352, 1559, 1803
TseFI	GTSAC	3 cut(s)	937, 968, 1150
TseI	GCWGC	1 cut(s)	1835
Tsp45I	GTSAC	3 cut(s)	937, 968, 1150
TspGWI	ACGGA	2 cut(s)	1099, 1834
TspRI	CASTG	3 cut(s)	1352, 1559, 1803
Vha464I	CTTAAG	2 cut(s)	572, 2228
VpaK11BI	GGWCC	1 cut(s)	116
VspI	ATTAAT	1 cut(s)	1776
XapI	RAATTY	5 cut(s)	230, 240, 1567, 1739, 1786
XbaI	TCTAGA	2 cut(s)	416, 898
XceI	RCATGY	2 cut(s)	1861, 2205
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1741
XhoI	CTCGAG	1 cut(s)	2138
XmaJI	CCTAGG	1 cut(s)	251
XmnI	GAANNNNTTC	1 cut(s)	193
XspI	CTAG	7 cut(s)	141, 252, 417, 678, 899, 1004, 1829
Zsp2I	ATGCAT	4 cut(s)	784, 1017, 1282, 1596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.