Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002968

Physical Location & Seq

Genomic Coordinates Reverse (-)

11071273 .. 11075588

Gene Structure 4316 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G010080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGGTCTCTATTCGTAGCTACATTCGAACCGGAGGAGCAGCTCGGCTCAGACCTCATAACTCGTGTGAGTCCACCACATCTTTCTCTCAGTACCCTTTAACTTCTGTTGAGCTCCCTCAATTTTTCTCAACAAACTCAAGTTCAGATTTTTGCTCTGGAATTAGACCTCACTCTGTTGAAAGTTATGATTTTGATGATTCTAATAATGGGAAAGGTAGTTTTAGGAAAATGGGTAATCGAAATATGGCGGGTTTGAGCTTCTTAGGAGGTGCCCAGAGTGATTGTGAAAACCCACAAAGTGAAAGTTTCAAACTTTTTGAAGTTTCAGATAGCGAAGAAGGGAATAATAGTGATGGTGGTGGTGATGATGATGAAGATGAGTTAGTGATGTTGAATTCTAATAGGGGTTGTGAGCAAAAAGAGAATCTGGGTAGAGTTGAAGGAGATGGGGATGAGGATGAATATAGACACCCTTTGGTGAGAGAGGTTTGCAGGTTAATTGAGCTTAGAACAGCTTGGACCCCAAAGTTTGAAGGTGAGTTAAGGCACTTGTTCCGAAGCCTGAAGCCGAAGCAGGTCTGTGCTGTTTTGAAGTCTCAGGCTGATGAAAGAGTTGCTTTGAAGATTTTTTACTGGGCTGATAGGCAGTGGCGGTATAAGCATGACCCGATTGTGTACTATGCAATGCTTGAGGTGCTTGGCAAGACTAAGTTGTGCCAAGGTGCTAGGAGGGTTCTTAGGTTAATGGCCCGTAGGCGGATTGAGCTTCGTTCTGAAGCTTTTCGCCATGTGATGGTGTCATATAGTCGAGCGGGCAAGTTGAGGCACGCGTTGCGTGTGTTGACTTTGATGCAGAAAGCGGGGCTTGAGCTTGATTTGTCAATGTGTAATACTGCAATTTATGTTTTGGTTAAGGGTAATAAGTTGGAGAAGGCGTTGAGGACCTTGGAAAGGATGAAGCTTGTTGGGATTGCACCAAATGTAGTCACTTATAACTGTTTGATAAAGGGGTATTGTGATCTGCATCGTGTAGAAGATGCAATCCAGGTGATTGATGAAATGCCGAGGAAGGGGTGTGCTCCTGATAAAGTTAGTTACTATACTGTGATGGATTTCCTTTGTAAGGAGAAGAGGGTCAGAGAAGTGAGGGACTTGATGGAGAAGATGATCAAGGATGGTGGGTTGTTACCAGACCAGGTCACATATAATAATCTTGTCCATGTGCTTTGTAAGCATGGCTATGGTGATGAGGCACTTGAATTTTTAAGGGAAGCCGAAGAGAAGGGATTTCGGTTTGATAAGGTTGGGTACAGTGCAATTGTACATTCATTTTGTAAGGATGGTCGGACTGACATGGCAAAAGAAATTGTTAGTGAAATGTTTTCAAAAGGTTGCATCCCAGATGTTGTAACATACACTGCTGTTCTGAATGGGTATTGTCGACTTGGGAAGTTGGATCAAGCTAAAAAGATGCTTCAGCACATGCATAAGCATGGTTGCAAGCCAAATACTGTGTCATATACGGCCTTATTAAATGGGCTTTGTCATGGTGGGAACTCATTGGAGGCAAGAGAGATGATGAACACGAGTGAGGAAGAATGGTGGACACCAAATGCCATCACTTATAGTGTTCTGATGCATGGGTTCCGGAGGGAGGGGAAATTGGTTGAGGCTTGTGATACTGTCAAAGAGATGATTAAAAAGGGATTTTTCCCTACCCCAGTTGAAATTAATCTCTTAATTCAGTCTCTTTGCCAAGAGGGGAAGATGGATGAGGCTAAGCGTTTCATGGAGGAGTGTCTAAATAAAGGTGGTGCTGTTAATGTTGTCAATTTTACTACTGTTATTCATGGATATTGTCAAAAAGATGACTTGGAAGCTGCTCTATCGTTGCTTGATGACATGTATCTCAGCAGTAAGCACCCAGATGCAGTAACTTATACAGCAATGATCAGTGCATTGGGAAAGAAAGGTAGAATACAAGACGCAACTGAACTTATGATGAAGATGCTGAATAAGGGTATTGACCCGACTCCCGTCACATTCAGGACGATCATCCATTGGTATTGTAAGATGAGTAGGGTGGAAGATTTGTTGAAATTATTGGAGCAGATGTTCTTAAGGCAAAACTGCAAAACAGCATATAATCAAGTGATTGAGAAGCTTTGTAGTTTTGGGAACTTTGAGGACGCTGATAAACTATTGGGTAAGGTGTTGAGAACAGCTTCAAGAGTTGATGCTAAAACATGCCATGTTGTTATGGATGGTTATTTGAGAAAGGGGATTCCTCTGTCAGCATACAAAGTGGCTTGTCGAATGTTCAATCGGAATCTGATTCCTGATTTAAAGTTGTGCGAGAAGGTAACGAAGAGACTGATGCTAGAAGGAAACTCCAAAGAGGCAGACAACCTTATGCTACGGTTTGTTGATCGTGGATGCATATCAAACCAACATCAGGAACATCTGGAAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

824

Amino Acids

93.78

Weight (kDa)

8.27

Isoelectric Point (pI)

33.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	230 - 320	2.4e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	257 - 424	2.9e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	284 - 338	1.9e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	294 - 340	2.7e-11	PPR repeat family
PPR_1	PF12854	323 - 354	1.2e-11	PPR repeat
PPR_2	PF13041	326 - 375	7.4e-17	PPR repeat family
PPR	PF01535	329 - 359	1.1e-07	PPR repeat
PPR_1	PF12854	394 - 424	1.7e-08	PPR repeat
PPR_2	PF13041	397 - 446	5.8e-10	PPR repeat family
PPR	PF01535	400 - 430	1.5e-06	PPR repeat
PPR_long	PF17177	419 - 552	2.1e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	422 - 478	5.1e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	428 - 460	8.3e-06	PPR repeat
PPR_2	PF13041	434 - 481	5.9e-13	PPR repeat family
PPR_3	PF13812	459 - 512	2.7e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	463 - 495	1e-11	PPR repeat
PPR_2	PF13041	467 - 516	5.1e-19	PPR repeat family
PPR	PF01535	470 - 500	8.2e-08	PPR repeat
PPR_1	PF12854	498 - 528	3e-06	PPR repeat
TPR_24	PF23276	538 - 632	6.7e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	604 - 635	9.6e-07	PPR repeat
PPR_2	PF13041	608 - 656	5.4e-13	PPR repeat family
PPR_3	PF13812	631 - 691	2.8e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	641 - 670	6.7e-07	PPR repeat
PPR_2	PF13041	642 - 691	1.3e-13	PPR repeat family
PPR	PF01535	645 - 675	6.1e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30290 AT1G30290
fragaria_vesca	FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050
malus_domestica	MD10G1258300.v1.1
prunus_persica	Prupe.4G085500_v2.0.a1 Prupe.4G085500_v2.0.a1
pyrus_communis	pycom05g26000 pycom10g21460
rosa_chinensis	RchiOBHm_Chr3g0490541 RchiOBHm_Chr3g0490551 RchiOBHm_Chr5g0014911
rosa_laevigata	RLG00000022885 RLG00000032150
rosa_multiflora	Rmu_sc0003862.1_g000007 Rmu_sc0013610.1_g000002
rosa_roxburghii	Rroxscaffold_1G00061660 Rroxscaffold_6G00393420
rosa_rugosa	Rorug03G0243900 Rorug05G0021400
rosa_samantha	Rh3AG293300 Rh3AG293400 Rh3BG329800 Rh3CG327300 Rh3CG327400 Rh3DG326700 Rh5AG117100 Rh5BG114100 Rh5CG125600 Rh5DG113500
rosa_wichuraiana	Rw3G025970 Rw5G010080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	993
Acc36I	ACCTGC	2 cut(s)	483, 565
AccB1I	GGYRCC	1 cut(s)	269
AccB7I	CCANNNNNTGG	1 cut(s)	793
AccBSI	CCGCTC	1 cut(s)	812
AccI	GTMKAC	1 cut(s)	1441
AccII	CGCG	1 cut(s)	830
AccIII	TCCGGA	1 cut(s)	1647
AciI	CCGC	5 cut(s)	248, 652, 757, 812, 860
AclWI	GGATC	1 cut(s)	1464
AcsI	RAATTY	2 cut(s)	394, 1259
AcuI	CTGAAG	3 cut(s)	584, 795, 1460
AdeI	CACNNNGTG	1 cut(s)	299
AfaI	GTAC	4 cut(s)	92, 677, 1310, 1323
AfiI	CCNNNNNNNGG	7 cut(s)	756, 793, 951, 1070, 1123, 1654, 2455
AflII	CTTAAG	1 cut(s)	2119
AflIII	ACRYGT	2 cut(s)	828, 1902
AjnI	CCWGG	2 cut(s)	1044, 1194
AloI	GAACNNNNNNTCC	2 cut(s)	2099, 2131
Alw21I	GWGCWC	2 cut(s)	114, 1081
Alw26I	GTCTC	4 cut(s)	10, 600, 1752, 2365
AlwI	GGATC	1 cut(s)	1464
Aor13HI	TCCGGA	1 cut(s)	1647
AoxI	GGCC	2 cut(s)	747, 1524
ApeKI	GCWGC	2 cut(s)	38, 1880
ApoI	RAATTY	2 cut(s)	394, 1259
ArsI	GACNNNNNNTTYG	2 cut(s)	1499, 1531
AseI	ATTAAT	1 cut(s)	1731
Asp700I	GAANNNNTTC	2 cut(s)	780, 2224
AspS9I	GGNCC	3 cut(s)	519, 748, 942
AsuHPI	GGTGA	5 cut(s)	374, 490, 548, 1060, 1256
AsuII	TTCGAA	1 cut(s)	25
AvaII	GGWCC	2 cut(s)	519, 942
BaeGI	GKGCMC	1 cut(s)	274
BanI	GGYRCC	1 cut(s)	269
BanII	GRGCYC	1 cut(s)	114
BarI	GAAGNNNNNNTAC	2 cut(s)	614, 646
BauI	CACGAG	2 cut(s)	61, 1585
Bbv12I	GWGCWC	2 cut(s)	114, 1081
BbvI	GCAGC	2 cut(s)	50, 1867
BceAI	ACGGC	1 cut(s)	1539
BciT130I	CCWGG	2 cut(s)	1046, 1196
BclI	TGATCA	2 cut(s)	1167, 1950
BcoDI	GTCTC	4 cut(s)	10, 600, 1752, 2365
BfaI	CTAG	2 cut(s)	726, 2381
BfrI	CTTAAG	1 cut(s)	2119
BfuAI	ACCTGC	2 cut(s)	483, 565
BisI	GCNGC	2 cut(s)	39, 1881
BlpI	GCTNAGC	1 cut(s)	1779
BlsI	GCNGC	2 cut(s)	40, 1882
Bme1390I	CCNGG	2 cut(s)	1046, 1196
Bme18I	GGWCC	2 cut(s)	519, 942
BmgT120I	GGNCC	3 cut(s)	519, 748, 942
BmiI	GGNNCC	3 cut(s)	271, 521, 1646
BmrFI	CCNGG	2 cut(s)	1046, 1196
BmrI	ACTGGG	2 cut(s)	643, 1715
BmuI	ACTGGG	2 cut(s)	643, 1715
BoxI	GACNNNNGTC	1 cut(s)	2036
Bpu1102I	GCTNAGC	1 cut(s)	1779
Bpu14I	TTCGAA	1 cut(s)	25
BpuEI	CTTGAG	3 cut(s)	121, 710, 887
BsaBI	GATNNNNATC	2 cut(s)	1023, 2440
BsaI	GGTCTC	1 cut(s)	10
BsaJI	CCNNGG	3 cut(s)	718, 945, 1064
BsaWI	WCCGGW	2 cut(s)	29, 1647
BsaXI	ACNNNNNCTCC	4 cut(s)	920, 950, 2099, 2129
Bsc4I	CCNNNNNNNGG	7 cut(s)	756, 793, 951, 1070, 1123, 1654, 2455
Bse1I	ACTGG	2 cut(s)	638, 1721
Bse3DI	GCAATG	2 cut(s)	690, 1953
Bse8I	GATNNNNATC	2 cut(s)	1023, 2440
BseAI	TCCGGA	1 cut(s)	1647
BseBI	CCWGG	2 cut(s)	1046, 1196
BseDI	CCNNGG	3 cut(s)	718, 945, 1064
BseJI	GATNNNNATC	2 cut(s)	1023, 2440
BseLI	CCNNNNNNNGG	7 cut(s)	756, 793, 951, 1070, 1123, 1654, 2455
BseMI	GCAATG	2 cut(s)	690, 1953
BseMII	CTCAG	4 cut(s)	61, 101, 611, 1924
BseNI	ACTGG	2 cut(s)	638, 1721
BseRI	GAGGAG	2 cut(s)	48, 1808
BseSI	GKGCMC	1 cut(s)	274
BseXI	GCAGC	2 cut(s)	50, 1867
Bsh1236I	CGCG	1 cut(s)	830
BshFI	GGCC	2 cut(s)	749, 1526
BshNI	GGYRCC	1 cut(s)	269
BsiHKAI	GWGCWC	2 cut(s)	114, 1081
BsiSI	CCGG	2 cut(s)	30, 1648
BslFI	GGGAC	1 cut(s)	1163
BslI	CCNNNNNNNGG	7 cut(s)	756, 793, 951, 1070, 1123, 1654, 2455
BsmAI	GTCTC	4 cut(s)	10, 600, 1752, 2365
BsmFI	GGGAC	1 cut(s)	1163
BsnI	GGCC	2 cut(s)	749, 1526
Bso31I	GGTCTC	1 cut(s)	10
Bsp119I	TTCGAA	1 cut(s)	25
Bsp1286I	GDGCHC	3 cut(s)	114, 274, 1081
Bsp13I	TCCGGA	1 cut(s)	1647
Bsp1407I	TGTACA	1 cut(s)	1321
Bsp143I	GATC	6 cut(s)	1018, 1167, 1456, 1950, 2052, 2428
Bsp1720I	GCTNAGC	1 cut(s)	1779
BspACI	CCGC	5 cut(s)	248, 652, 757, 812, 860
BspANI	GGCC	2 cut(s)	749, 1526
BspCNI	CTCAG	4 cut(s)	60, 100, 610, 1923
BspEI	TCCGGA	1 cut(s)	1647
BspFNI	CGCG	1 cut(s)	830
BspLI	GGNNCC	3 cut(s)	271, 521, 1646
BspMI	ACCTGC	2 cut(s)	483, 565
BspPI	GGATC	1 cut(s)	1464
BspT104I	TTCGAA	1 cut(s)	25
BspT107I	GGYRCC	1 cut(s)	269
BspTI	CTTAAG	1 cut(s)	2119
BspTNI	GGTCTC	1 cut(s)	10
BsrBI	CCGCTC	1 cut(s)	812
BsrDI	GCAATG	2 cut(s)	690, 1953
BsrGI	TGTACA	1 cut(s)	1321
BsrI	ACTGG	2 cut(s)	638, 1721
BssECI	CCNNGG	3 cut(s)	718, 945, 1064
BssMI	GATC	6 cut(s)	1018, 1167, 1456, 1950, 2052, 2428
BssSI	CACGAG	2 cut(s)	61, 1585
BssT1I	CCWWGG	2 cut(s)	718, 945
Bst2BI	CACGAG	2 cut(s)	61, 1585
Bst2UI	CCWGG	2 cut(s)	1046, 1196
Bst4CI	ACNGT	7 cut(s)	998, 1105, 1313, 1513, 1684, 1843, 2421
Bst6I	CTCTTC	3 cut(s)	1124, 1272, 2363
BstAFI	CTTAAG	1 cut(s)	2119
BstAPI	GCANNNNNTGC	1 cut(s)	832
BstAUI	TGTACA	1 cut(s)	1321
BstBI	TTCGAA	1 cut(s)	25
BstC8I	GCNNGC	3 cut(s)	814, 828, 1502
BstDEI	CTNAG	9 cut(s)	47, 87, 262, 506, 597, 708, 737, 1779, 1910
BstENI	CCTNNNNNAGG	2 cut(s)	949, 1121
BstFNI	CGCG	1 cut(s)	830
BstKTI	GATC	6 cut(s)	1021, 1170, 1459, 1953, 2055, 2431
BstMAI	GTCTC	4 cut(s)	10, 600, 1752, 2365
BstMBI	GATC	6 cut(s)	1018, 1167, 1456, 1950, 2052, 2428
BstMWI	GCNNNNNNNGC	5 cut(s)	658, 694, 763, 832, 1231
BstNI	CCWGG	2 cut(s)	1046, 1196
BstNSI	RCATGY	3 cut(s)	1486, 1906, 2250
BstPAI	GACNNNNGTC	1 cut(s)	2036
BstSCI	CCNGG	2 cut(s)	1044, 1194
BstSLI	GKGCMC	1 cut(s)	274
BstUI	CGCG	1 cut(s)	830
BstV1I	GCAGC	2 cut(s)	50, 1867
BsuRI	GGCC	2 cut(s)	749, 1526
BtsI	GCAGTG	2 cut(s)	653, 1416
BtsIMutI	CAGTG	4 cut(s)	653, 1318, 1416, 1960
BveI	ACCTGC	2 cut(s)	483, 565
Cac8I	GCNNGC	3 cut(s)	814, 828, 1502
Cfr13I	GGNCC	3 cut(s)	519, 748, 942
CseI	GACGC	2 cut(s)	1994, 2198
CsiI	ACCWGGT	1 cut(s)	1194
Csp6I	GTAC	4 cut(s)	91, 676, 1309, 1322
CspCI	CAANNNNNGTGG	2 cut(s)	1159, 1194
CviQI	GTAC	4 cut(s)	91, 676, 1309, 1322
DdeI	CTNAG	9 cut(s)	47, 87, 262, 506, 597, 708, 737, 1779, 1910
DpnI	GATC	6 cut(s)	1020, 1169, 1458, 1952, 2054, 2430
DpnII	GATC	6 cut(s)	1018, 1167, 1456, 1950, 2052, 2428
DraI	TTTAAA	1 cut(s)	2346
DraIII	CACNNNGTG	1 cut(s)	299
Eam1104I	CTCTTC	3 cut(s)	1124, 1272, 2363
EarI	CTCTTC	3 cut(s)	1124, 1272, 2363
EciI	GGCGGA	1 cut(s)	772
Ecl136II	GAGCTC	1 cut(s)	112
Eco130I	CCWWGG	2 cut(s)	718, 945
Eco24I	GRGCYC	1 cut(s)	114
Eco31I	GGTCTC	1 cut(s)	10
Eco47I	GGWCC	2 cut(s)	519, 942
Eco53kI	GAGCTC	1 cut(s)	112
Eco57I	CTGAAG	3 cut(s)	584, 795, 1460
EcoICRI	GAGCTC	1 cut(s)	112
EcoNI	CCTNNNNNAGG	2 cut(s)	949, 1121
EcoO109I	RGGNCCY	1 cut(s)	942
EcoRI	GAATTC	1 cut(s)	394
EcoRII	CCWGG	2 cut(s)	1044, 1194
EcoT14I	CCWWGG	2 cut(s)	718, 945
EcoT22I	ATGCAT	3 cut(s)	1488, 1641, 2441
EcoT38I	GRGCYC	1 cut(s)	114
ErhI	CCWWGG	2 cut(s)	718, 945
FalI	AAGNNNNNCTT	4 cut(s)	601, 633, 849, 881
FaqI	GGGAC	1 cut(s)	1163
FauI	CCCGC	3 cut(s)	241, 805, 853
FbaI	TGATCA	2 cut(s)	1167, 1950
FblI	GTMKAC	1 cut(s)	1441
Fnu4HI	GCNGC	2 cut(s)	39, 1881
FriOI	GRGCYC	1 cut(s)	114
Fsp4HI	GCNGC	2 cut(s)	39, 1881
FspBI	CTAG	2 cut(s)	726, 2381
GluI	GCNGC	2 cut(s)	39, 1881
HaeIII	GGCC	2 cut(s)	749, 1526
HapII	CCGG	2 cut(s)	30, 1648
HgaI	GACGC	2 cut(s)	1994, 2198
HincII	GTYRAC	2 cut(s)	843, 1442
HindII	GTYRAC	2 cut(s)	843, 1442
HindIII	AAGCTT	3 cut(s)	777, 959, 2162
HinfI	GANTC	7 cut(s)	68, 197, 424, 2032, 2284, 2329, 2335
HpaII	CCGG	2 cut(s)	30, 1648
HphI	GGTGA	5 cut(s)	374, 490, 548, 1060, 1256
Hpy166II	GTNNAC	5 cut(s)	72, 676, 843, 1442, 1605
Hpy188III	TCNNGA	8 cut(s)	156, 1082, 1648, 2047, 2229, 2339, 2456, 2465
Hpy8I	GTNNAC	5 cut(s)	72, 676, 843, 1442, 1605
HpyAV	CCTTC	8 cut(s)	332, 434, 527, 925, 1063, 1276, 2353, 2378
HpyCH4III	ACNGT	7 cut(s)	998, 1105, 1313, 1513, 1684, 1843, 2421
HpyF10VI	GCNNNNNNNGC	5 cut(s)	658, 694, 763, 832, 1231
HpyF3I	CTNAG	9 cut(s)	47, 87, 262, 506, 597, 708, 737, 1779, 1910
Kpn2I	TCCGGA	1 cut(s)	1647
Ksp22I	TGATCA	2 cut(s)	1167, 1950
Kzo9I	GATC	6 cut(s)	1018, 1167, 1456, 1950, 2052, 2428
LmnI	GCTCC	4 cut(s)	35, 117, 1084, 2107
Lsp1109I	GCAGC	2 cut(s)	50, 1867
MabI	ACCWGGT	1 cut(s)	1194
MaeI	CTAG	2 cut(s)	726, 2381
MaeIII	GTNAC	8 cut(s)	985, 1094, 1185, 1198, 1408, 1933, 2038, 2362
MalI	GATC	6 cut(s)	1020, 1169, 1458, 1952, 2054, 2430
MbiI	CCGCTC	1 cut(s)	812
MboI	GATC	6 cut(s)	1018, 1167, 1456, 1950, 2052, 2428
MfeI	CAATTG	1 cut(s)	1317
MhlI	GDGCHC	3 cut(s)	114, 274, 1081
MluI	ACGCGT	1 cut(s)	828
MlyI	GAGTC	2 cut(s)	77, 2026
MmeI	TCCRAC	3 cut(s)	906, 1325, 1434
Mph1103I	ATGCAT	3 cut(s)	1488, 1641, 2441
MroI	TCCGGA	1 cut(s)	1647
MroXI	GAANNNNTTC	2 cut(s)	780, 2224
MslI	CAYNNNNRTG	3 cut(s)	1239, 1491, 1926
MspCI	CTTAAG	1 cut(s)	2119
MspI	CCGG	2 cut(s)	30, 1648
MspR9I	CCNGG	2 cut(s)	1046, 1196
MunI	CAATTG	1 cut(s)	1317
MvaI	CCWGG	2 cut(s)	1046, 1196
MvnI	CGCG	1 cut(s)	830
MwoI	GCNNNNNNNGC	5 cut(s)	658, 694, 763, 832, 1231
NdeII	GATC	6 cut(s)	1018, 1167, 1456, 1950, 2052, 2428
NlaIV	GGNNCC	3 cut(s)	271, 521, 1646
NmeAIII	GCCGAG	2 cut(s)	22, 1089
NmuCI	GTSAC	3 cut(s)	985, 1198, 2038
NsiI	ATGCAT	3 cut(s)	1488, 1641, 2441
NspI	RCATGY	3 cut(s)	1486, 1906, 2250
NspV	TTCGAA	1 cut(s)	25
PciI	ACATGT	1 cut(s)	1902
PdmI	GAANNNNTTC	2 cut(s)	780, 2224
PfeI	GAWTC	5 cut(s)	197, 424, 2284, 2329, 2335
PflFI	GACNNNGTC	1 cut(s)	1196
PflMI	CCANNNNNTGG	1 cut(s)	793
PkrI	GCNGC	2 cut(s)	40, 1882
PleI	GAGTC	2 cut(s)	76, 2026
PpsI	GAGTC	2 cut(s)	76, 2026
PpuMI	RGGWCCY	1 cut(s)	942
PscI	ACATGT	1 cut(s)	1902
PshAI	GACNNNNGTC	1 cut(s)	2036
PshBI	ATTAAT	1 cut(s)	1731
PsiI	TTATAA	1 cut(s)	993
Psp124BI	GAGCTC	1 cut(s)	114
Psp5II	RGGWCCY	1 cut(s)	942
Psp6I	CCWGG	2 cut(s)	1044, 1194
PspGI	CCWGG	2 cut(s)	1044, 1194
PspN4I	GGNNCC	3 cut(s)	271, 521, 1646
PspPI	GGNCC	3 cut(s)	519, 748, 942
PspPPI	RGGWCCY	1 cut(s)	942
PsyI	GACNNNGTC	1 cut(s)	1196
RsaI	GTAC	4 cut(s)	92, 677, 1310, 1323
RsaNI	GTAC	4 cut(s)	91, 676, 1309, 1322
RseI	CAYNNNNRTG	3 cut(s)	1239, 1491, 1926
SacI	GAGCTC	1 cut(s)	114
SalI	GTCGAC	1 cut(s)	1440
SatI	GCNGC	2 cut(s)	39, 1881
Sau3AI	GATC	6 cut(s)	1018, 1167, 1456, 1950, 2052, 2428
Sau96I	GGNCC	3 cut(s)	519, 748, 942
SchI	GAGTC	2 cut(s)	77, 2026
ScrFI	CCNGG	2 cut(s)	1046, 1196
SduI	GDGCHC	3 cut(s)	114, 274, 1081
SexAI	ACCWGGT	1 cut(s)	1194
SfuI	TTCGAA	1 cut(s)	25
SinI	GGWCC	2 cut(s)	519, 942
SmiMI	CAYNNNNRTG	3 cut(s)	1239, 1491, 1926
SmlI	CTYRAG	4 cut(s)	136, 689, 866, 2119
SmoI	CTYRAG	4 cut(s)	136, 689, 866, 2119
SsiI	CCGC	5 cut(s)	248, 652, 757, 812, 860
SspMI	CTAG	2 cut(s)	726, 2381
SstI	GAGCTC	1 cut(s)	114
StyD4I	CCNGG	2 cut(s)	1044, 1194
StyI	CCWWGG	2 cut(s)	718, 945
TaaI	ACNGT	7 cut(s)	998, 1105, 1313, 1513, 1684, 1843, 2421
TaqI	TCGA	5 cut(s)	25, 238, 808, 1441, 2314
TatI	WGTACW	2 cut(s)	675, 1321
TfiI	GAWTC	5 cut(s)	197, 424, 2284, 2329, 2335
TscAI	CASTG	4 cut(s)	653, 1318, 1423, 1960
TseFI	GTSAC	3 cut(s)	985, 1198, 2038
TseI	GCWGC	2 cut(s)	38, 1880
Tsp45I	GTSAC	3 cut(s)	985, 1198, 2038
TspRI	CASTG	4 cut(s)	653, 1318, 1423, 1960
Tth111I	GACNNNGTC	1 cut(s)	1196
Van91I	CCANNNNNTGG	1 cut(s)	793
Vha464I	CTTAAG	1 cut(s)	2119
VpaK11BI	GGWCC	2 cut(s)	519, 942
VspI	ATTAAT	1 cut(s)	1731
XagI	CCTNNNNNAGG	2 cut(s)	949, 1121
XapI	RAATTY	2 cut(s)	394, 1259
XceI	RCATGY	3 cut(s)	1486, 1906, 2250
XmiI	GTMKAC	1 cut(s)	1441
XmnI	GAANNNNTTC	2 cut(s)	780, 2224
XspI	CTAG	2 cut(s)	726, 2381
Zsp2I	ATGCAT	3 cut(s)	1488, 1641, 2441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.