Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002968

Physical Location & Seq

Genomic Coordinates Forward (+)

2918035 .. 2923672

Gene Structure 5638 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g05050.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

ATGTTCTCTATTCGAATTGGAGGAGCTGCTCGGTTCAGGCTTCATAGCTCGTGTGAGTTCACCGCCTCTTTATTCGAGTACCCTTTAAATTTGGTTGAGCTCTCTTCGTTTTTCTCATCAATTAGCTCAAGAAACTCTGACCCAAGTTCAGATTTTGATTATGAAACTAGACCTCGTTCTGTTAAAAGTAGTGATTTTGATGATTATAATAGTGGGAATGATAGATTTAGGAAAATGGGTCATGCAAATATTGGGGTTCAAAGCCAAAGTTTCAAGCTTTTTGAAGAGTCAGATAGTGAAGCAGGGAATGACAGTGATAGTGATGAGGATGAGGATGATGTAATATTGTGGAATTCTAATAGGGTTTGTGAGGAAAGAGGGAAGTTGGGGAGAGTTGAAGGAGGTGGGGATGGAGATGAGGATGAGTATAGGCACCCTTTGGTGAGAGAGGTAGGTAGGTTGATTGAGATGAGAACTGCTTGGACTCCAAAGTTTGAAGGGGAGTTAAGGCACTTGTTACGGGGCTTGAAGCCGAAGCAGGTTTGTGCTGTTTTGAAGTCTCAGGCTGATGAGAGAGTTGCGTTGAATTTTTTTTACTGGGCTGATAGGCAGTGGCGGTATAAGCATGATCAGATTGTGTACTATGCAATGCTGGAGGTGCTTGGGAAGACTAAGTTGTGCCAGGGTGCTAGGAGGGTTCTTAGGTTGATGGCGCGTAGGCGGATCGAGCTTCGTTCTGAAGCTTTTGGTCATGTGATGGTGTCGTATAGTCGAGCGGGGAAGTTGAGGCACGCGTTGCGTGTGTTGACTTTGATGCAGAAAGCGGGGCTTGAGCTTGATTTGGCAATGTGTAATACTGCAATTTGTGTTTTGGTGAAAGGGAATAAGTTGGAGAAGGCGTTGAGGACCTTGGAAAGGATGAAGCTTGTTGGGATTGCACCAAATGTACTCACTTATAATTGTTTGATAAAGGGGTATTGTGATATGCATCGTGTTGAAGATGCACTTCAGTTGCTTGATAAAATGCCGAAGAAGGGGTGTGCTCCTGATAAAGTTAGTTATTATACTGTGATGGATTTCCTTTGTAAGGAGAAGAGGGTCAAAGAAGTGAGGGACTTGATGGAGAAGATGATCAAGGATGGTGGGTTGTTACCAGACCAGGTTACTTATAATAATCTTGTCCATGTGCTTTGTAAGCACGGCTACGGTGACGAGGCAATTGAATTTTTAAGGGAAGCCGAAGAGAAGGGATTTCGGTTTGATAAGGTTGGGTACAGTGCAATTGTACATTCATTTTGTAAGGATGGTAGGATTGACATGGCAAAAGAAATTGTTAGTGAAATGTTCTCAAAAGGTTGCACCCCAGATGTTGTAACATACACTGCTGTTCTGAATGGGTATTGCCGACTCAGGAAGGTGGATCAAGCTAAAAAGATGCTTCAGCACATGCACAAACATGGTTGCAAGCCAAATACTGTATCATATACAGCCTTGTTAAATGGGCTTTGTCGTGGTGGGAACTCATTGGAGGCAAGAGATATGATGAACATGAGTGAGGAAGAATGGTGGACACCAAATGCCATTACTTATAGTGTTCTGATGCATGGATTCCGGAGAGAAGGGAAATTAGTTGAGGCTTGTGATACTGTCAAAGAGATGATTAAAAAGGGCTTTTTCCCTACCCCTGTTGAAATTAATCTCCTAATTCAGTCTCTTTGCCAAGAGGGGAAGATGGATGAGGCTAAACGTTTCATGGAGGAGTGTCTAAACAAAGGTTGTGCTGTTAATGTTGTCAATTTTACTACTGTTATTCATGGATATTGTAAAAAAGATGACTTGGAAGCAGCTCTGTCGGTGCTTGATGACATGTATCTCAGCAATAAACACCCAGATGCAGTAACTTATACAGCAGTGATCAATGAATTGGCAAAGAAAGGTAGAATACAAGAGGCAACAGAACTTATGATAAAGATGCTGGGTAAGGGTATTGATCCGACTCCTGTCACATACAGGACGATCATCCATTGGTATTGTAAGATGAGTAGGGTGGATGACTTGTTGACCTTATTGGAGAAGATGTTCTTACGGCAAAATTGCAAAACAGCATATAATCAAGTGATTGAAAAGCTTTGTAGTTTTGGGAACTTCGAGGAGGCTGATAAACTACTGGGTAAGGTGTTGAGAACAGCTTCAAGAGTTGATGCTAAGACATGCCATGTTGTTATGGATGGTTACTTGAGAAAAGGGATTCCTCTGTCAGCATACAAAGTGGCTTGTCGAATGTTCAGTAGGAATCTGATTCCTGATTTAAAGTTGTGTGAGAAGGTGATCAAGAAACTGATGCTTTCAGGAAACTCCAAAGAGGCAGACAACCTTATGTTAAGGTTTGTTGAGCGTGGGTGCATATCAAACCAACAACAGGGACATCTGGAAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

813

Amino Acids

92.68

Weight (kDa)

8.53

Isoelectric Point (pI)

37.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	218 - 308	8.7e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	261 - 378	6.1e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	271 - 328	9.9e-12	Pentatricopeptide repeat domain
PPR_2	PF13041	282 - 328	2.6e-11	PPR repeat family
PPR_1	PF12854	311 - 342	1.6e-11	PPR repeat
PPR_2	PF13041	314 - 363	2.6e-16	PPR repeat family
PPR	PF01535	318 - 347	2e-07	PPR repeat
PPR_long	PF17177	372 - 540	2.5e-12	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	382 - 412	1.1e-08	PPR repeat
PPR_2	PF13041	385 - 434	5.6e-10	PPR repeat family
PPR	PF01535	388 - 418	2.4e-06	PPR repeat
TPR_24	PF23276	392 - 487	4.5e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	410 - 466	2.1e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	416 - 448	2.9e-06	PPR repeat
PPR_2	PF13041	422 - 469	8.4e-14	PPR repeat family
PPR_3	PF13812	451 - 500	3.1e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	451 - 483	7.7e-11	PPR repeat
PPR_2	PF13041	455 - 504	1.1e-18	PPR repeat family
PPR	PF01535	458 - 488	6.3e-07	PPR repeat
PPR_1	PF12854	486 - 516	2.7e-07	PPR repeat
PPR_1	PF12854	591 - 623	2.7e-08	PPR repeat
PPR_2	PF13041	596 - 644	2.9e-13	PPR repeat family
PPR_3	PF13812	618 - 679	7.6e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	629 - 658	2.3e-06	PPR repeat
PPR_2	PF13041	630 - 679	3.4e-13	PPR repeat family
PPR_1	PF12854	661 - 693	6e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30290 AT1G30290
fragaria_vesca	FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050 FvH4_3g05050
malus_domestica	MD10G1258300.v1.1
prunus_persica	Prupe.4G085500_v2.0.a1 Prupe.4G085500_v2.0.a1
pyrus_communis	pycom05g26000 pycom10g21460
rosa_chinensis	RchiOBHm_Chr3g0490541 RchiOBHm_Chr3g0490551 RchiOBHm_Chr5g0014911
rosa_laevigata	RLG00000022885 RLG00000032150
rosa_multiflora	Rmu_sc0003862.1_g000007 Rmu_sc0013610.1_g000002
rosa_roxburghii	Rroxscaffold_1G00061660 Rroxscaffold_6G00393420
rosa_rugosa	Rorug03G0243900 Rorug05G0021400
rosa_samantha	Rh3AG293300 Rh3AG293400 Rh3BG329800 Rh3CG327300 Rh3CG327400 Rh3DG326700 Rh5AG117100 Rh5BG114100 Rh5CG125600 Rh5DG113500
rosa_wichuraiana	Rw3G025970 Rw5G010080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	207, 957, 1170
Acc36I	ACCTGC	1 cut(s)	529
AccB1I	GGYRCC	1 cut(s)	432
AccBSI	CCGCTC	1 cut(s)	776
AccII	CGCG	2 cut(s)	715, 794
AccIII	TCCGGA	1 cut(s)	1611
AciI	CCGC	5 cut(s)	63, 616, 721, 776, 824
AclI	AACGTT	1 cut(s)	1747
AclWI	GGATC	3 cut(s)	731, 1428, 1985
AcsI	RAATTY	4 cut(s)	88, 352, 586, 1223
AcuI	CTGAAG	3 cut(s)	759, 992, 1424
AfaI	GTAC	5 cut(s)	80, 641, 948, 1274, 1287
AfiI	CCNNNNNNNGG	4 cut(s)	915, 1034, 1087, 2419
AflIII	ACRYGT	2 cut(s)	792, 1866
AjnI	CCWGG	2 cut(s)	681, 1158
AloI	GAACNNNNNNTCC	2 cut(s)	2063, 2095
Alw21I	GWGCWC	2 cut(s)	102, 1045
Alw26I	GTCTC	2 cut(s)	564, 1716
AlwI	GGATC	3 cut(s)	731, 1428, 1985
Aor13HI	TCCGGA	1 cut(s)	1611
ApeKI	GCWGC	2 cut(s)	26, 1844
ApoI	RAATTY	4 cut(s)	88, 352, 586, 1223
AseI	ATTAAT	1 cut(s)	1695
Asp700I	GAANNNNTTC	2 cut(s)	2078, 2188
AspLEI	GCGC	1 cut(s)	715
AspS9I	GGNCC	1 cut(s)	906
AsuHPI	GGTGA	5 cut(s)	52, 454, 886, 1220, 2338
AsuII	TTCGAA	1 cut(s)	13
AvaII	GGWCC	1 cut(s)	906
BanI	GGYRCC	1 cut(s)	432
BanII	GRGCYC	1 cut(s)	102
BauI	CACGAG	1 cut(s)	49
BbsI	GAAGAC	1 cut(s)	674
Bbv12I	GWGCWC	2 cut(s)	102, 1045
BbvI	GCAGC	2 cut(s)	13, 1856
BccI	CCATC	9 cut(s)	404, 703, 751, 1066, 1114, 1133, 1298, 1726, 2222
BceAI	ACGGC	2 cut(s)	1216, 2102
BcgI	CGANNNNNNTGC	2 cut(s)	1833, 1867
BciT130I	CCWGG	2 cut(s)	683, 1160
BclI	TGATCA	4 cut(s)	628, 1131, 1914, 2328
BcoDI	GTCTC	2 cut(s)	564, 1716
BfaI	CTAG	2 cut(s)	168, 690
BfuAI	ACCTGC	1 cut(s)	529
BisI	GCNGC	2 cut(s)	27, 1845
BlsI	GCNGC	2 cut(s)	28, 1846
Bme1390I	CCNGG	2 cut(s)	683, 1160
Bme18I	GGWCC	1 cut(s)	906
BmgT120I	GGNCC	1 cut(s)	906
BmiI	GGNNCC	1 cut(s)	434
BmrFI	CCNGG	2 cut(s)	683, 1160
BmrI	ACTGGG	2 cut(s)	607, 2177
BmsI	GCATC	9 cut(s)	804, 991, 997, 1425, 1590, 1882, 1962, 2191, 2331
BmuI	ACTGGG	2 cut(s)	607, 2177
BoxI	GACNNNNGTC	1 cut(s)	2000
BpiI	GAAGAC	1 cut(s)	674
BpmI	CTGGAG	1 cut(s)	674
Bpu14I	TTCGAA	1 cut(s)	13
BpuEI	CTTGAG	3 cut(s)	112, 851, 2257
BsaBI	GATNNNNATC	1 cut(s)	987
BsaJI	CCNNGG	2 cut(s)	682, 909
BsaWI	WCCGGW	1 cut(s)	1611
BsaXI	ACNNNNNCTCC	4 cut(s)	884, 914, 2063, 2093
Bsc4I	CCNNNNNNNGG	4 cut(s)	915, 1034, 1087, 2419
Bse1I	ACTGG	2 cut(s)	602, 2172
Bse3DI	GCAATG	2 cut(s)	654, 852
Bse8I	GATNNNNATC	1 cut(s)	987
BseAI	TCCGGA	1 cut(s)	1611
BseBI	CCWGG	2 cut(s)	683, 1160
BseDI	CCNNGG	2 cut(s)	682, 909
BseJI	GATNNNNATC	1 cut(s)	987
BseLI	CCNNNNNNNGG	4 cut(s)	915, 1034, 1087, 2419
BseMI	GCAATG	2 cut(s)	654, 852
BseMII	CTCAG	3 cut(s)	575, 1423, 1888
BseNI	ACTGG	2 cut(s)	602, 2172
BseRI	GAGGAG	3 cut(s)	36, 1772, 2165
BseXI	GCAGC	2 cut(s)	13, 1856
BseYI	CCCAGC	1 cut(s)	1975
Bsh1236I	CGCG	2 cut(s)	715, 794
BshNI	GGYRCC	1 cut(s)	432
BsiHKAI	GWGCWC	2 cut(s)	102, 1045
BsiSI	CCGG	1 cut(s)	1612
BslFI	GGGAC	1 cut(s)	1127
BslI	CCNNNNNNNGG	4 cut(s)	915, 1034, 1087, 2419
BsmAI	GTCTC	2 cut(s)	564, 1716
BsmFI	GGGAC	1 cut(s)	1127
Bsp119I	TTCGAA	1 cut(s)	13
Bsp1286I	GDGCHC	2 cut(s)	102, 1045
Bsp13I	TCCGGA	1 cut(s)	1611
Bsp1407I	TGTACA	1 cut(s)	1285
Bsp143I	GATC	8 cut(s)	628, 723, 1131, 1420, 1914, 1990, 2016, 2328
BspACI	CCGC	5 cut(s)	63, 616, 721, 776, 824
BspCNI	CTCAG	3 cut(s)	574, 1422, 1887
BspEI	TCCGGA	1 cut(s)	1611
BspFNI	CGCG	2 cut(s)	715, 794
BspLI	GGNNCC	1 cut(s)	434
BspMI	ACCTGC	1 cut(s)	529
BspPI	GGATC	3 cut(s)	731, 1428, 1985
BspT104I	TTCGAA	1 cut(s)	13
BspT107I	GGYRCC	1 cut(s)	432
BsrBI	CCGCTC	1 cut(s)	776
BsrDI	GCAATG	2 cut(s)	654, 852
BsrGI	TGTACA	1 cut(s)	1285
BsrI	ACTGG	2 cut(s)	602, 2172
BssECI	CCNNGG	2 cut(s)	682, 909
BssMI	GATC	8 cut(s)	628, 723, 1131, 1420, 1914, 1990, 2016, 2328
BssSI	CACGAG	1 cut(s)	49
BssT1I	CCWWGG	1 cut(s)	909
Bst2BI	CACGAG	1 cut(s)	49
Bst2UI	CCWGG	2 cut(s)	683, 1160
Bst4CI	ACNGT	7 cut(s)	314, 1069, 1208, 1277, 1477, 1648, 1807
Bst6I	CTCTTC	4 cut(s)	109, 279, 1088, 1236
BstAPI	GCANNNNNTGC	1 cut(s)	796
BstAUI	TGTACA	1 cut(s)	1285
BstBI	TTCGAA	1 cut(s)	13
BstC8I	GCNNGC	2 cut(s)	792, 1466
BstDEI	CTNAG	6 cut(s)	561, 672, 701, 1409, 1874, 2205
BstENI	CCTNNNNNAGG	2 cut(s)	913, 1085
BstFNI	CGCG	2 cut(s)	715, 794
BstHHI	GCGC	1 cut(s)	715
BstKTI	GATC	8 cut(s)	631, 726, 1134, 1423, 1917, 1993, 2019, 2331
BstMAI	GTCTC	2 cut(s)	564, 1716
BstMBI	GATC	8 cut(s)	628, 723, 1131, 1420, 1914, 1990, 2016, 2328
BstMWI	GCNNNNNNNGC	5 cut(s)	622, 658, 727, 796, 1195
BstNI	CCWGG	2 cut(s)	683, 1160
BstNSI	RCATGY	3 cut(s)	1450, 1870, 2214
BstPAI	GACNNNNGTC	1 cut(s)	2000
BstSCI	CCNGG	2 cut(s)	681, 1158
BstUI	CGCG	2 cut(s)	715, 794
BstV1I	GCAGC	2 cut(s)	13, 1856
BstV2I	GAAGAC	1 cut(s)	674
BtsI	GCAGTG	3 cut(s)	617, 1380, 1917
BtsIMutI	CAGTG	5 cut(s)	319, 617, 1282, 1380, 1917
BveI	ACCTGC	1 cut(s)	529
Cac8I	GCNNGC	2 cut(s)	792, 1466
CfoI	GCGC	1 cut(s)	715
Cfr13I	GGNCC	1 cut(s)	906
CsiI	ACCWGGT	1 cut(s)	1158
Csp6I	GTAC	5 cut(s)	79, 640, 947, 1273, 1286
CspCI	CAANNNNNGTGG	2 cut(s)	1123, 1158
CviQI	GTAC	5 cut(s)	79, 640, 947, 1273, 1286
DdeI	CTNAG	6 cut(s)	561, 672, 701, 1409, 1874, 2205
DpnI	GATC	8 cut(s)	630, 725, 1133, 1422, 1916, 1992, 2018, 2330
DpnII	GATC	8 cut(s)	628, 723, 1131, 1420, 1914, 1990, 2016, 2328
DraI	TTTAAA	2 cut(s)	87, 2310
Eam1104I	CTCTTC	4 cut(s)	109, 279, 1088, 1236
EarI	CTCTTC	4 cut(s)	109, 279, 1088, 1236
EciI	GGCGGA	1 cut(s)	736
Ecl136II	GAGCTC	1 cut(s)	100
Eco130I	CCWWGG	1 cut(s)	909
Eco24I	GRGCYC	1 cut(s)	102
Eco47I	GGWCC	1 cut(s)	906
Eco53kI	GAGCTC	1 cut(s)	100
Eco57I	CTGAAG	3 cut(s)	759, 992, 1424
EcoICRI	GAGCTC	1 cut(s)	100
EcoNI	CCTNNNNNAGG	2 cut(s)	913, 1085
EcoO109I	RGGNCCY	1 cut(s)	906
EcoRI	GAATTC	1 cut(s)	352
EcoRII	CCWGG	2 cut(s)	681, 1158
EcoT14I	CCWWGG	1 cut(s)	909
EcoT22I	ATGCAT	2 cut(s)	990, 1605
EcoT38I	GRGCYC	1 cut(s)	102
ErhI	CCWWGG	1 cut(s)	909
FalI	AAGNNNNNCTT	6 cut(s)	813, 845, 990, 1022, 2066, 2098
FaqI	GGGAC	1 cut(s)	1127
FauI	CCCGC	2 cut(s)	769, 817
FbaI	TGATCA	4 cut(s)	628, 1131, 1914, 2328
Fnu4HI	GCNGC	2 cut(s)	27, 1845
FriOI	GRGCYC	1 cut(s)	102
Fsp4HI	GCNGC	2 cut(s)	27, 1845
FspBI	CTAG	2 cut(s)	168, 690
GlaI	GCGC	1 cut(s)	714
GluI	GCNGC	2 cut(s)	27, 1845
GsaI	CCCAGC	1 cut(s)	1979
GsuI	CTGGAG	1 cut(s)	674
HapII	CCGG	1 cut(s)	1612
HhaI	GCGC	1 cut(s)	715
Hin6I	GCGC	1 cut(s)	713
HinP1I	GCGC	1 cut(s)	713
HincII	GTYRAC	2 cut(s)	807, 2061
HindII	GTYRAC	2 cut(s)	807, 2061
HindIII	AAGCTT	4 cut(s)	275, 741, 923, 2126
HinfI	GANTC	8 cut(s)	287, 484, 1407, 1608, 1996, 2248, 2293, 2299
HpaII	CCGG	1 cut(s)	1612
HphI	GGTGA	5 cut(s)	52, 454, 886, 1220, 2338
Hpy166II	GTNNAC	5 cut(s)	60, 640, 807, 1569, 2061
Hpy188I	TCNGA	9 cut(s)	139, 151, 292, 633, 739, 1392, 1599, 1995, 2298
Hpy188III	TCNNGA	9 cut(s)	129, 1046, 1411, 1612, 2193, 2303, 2332, 2349, 2429
Hpy8I	GTNNAC	5 cut(s)	60, 640, 807, 1569, 2061
HpyAV	CCTTC	8 cut(s)	392, 491, 889, 1027, 1240, 1408, 1613, 2317
HpyCH4III	ACNGT	7 cut(s)	314, 1069, 1208, 1277, 1477, 1648, 1807
HpyCH4IV	ACGT	1 cut(s)	1747
HpyF10VI	GCNNNNNNNGC	5 cut(s)	622, 658, 727, 796, 1195
HpyF3I	CTNAG	6 cut(s)	561, 672, 701, 1409, 1874, 2205
HpySE526I	ACGT	1 cut(s)	1747
HspAI	GCGC	1 cut(s)	713
Kpn2I	TCCGGA	1 cut(s)	1611
Ksp22I	TGATCA	4 cut(s)	628, 1131, 1914, 2328
Kzo9I	GATC	8 cut(s)	628, 723, 1131, 1420, 1914, 1990, 2016, 2328
LmnI	GCTCC	2 cut(s)	23, 1048
Lsp1109I	GCAGC	2 cut(s)	13, 1856
LweI	GCATC	9 cut(s)	804, 991, 997, 1425, 1590, 1882, 1962, 2191, 2331
MabI	ACCWGGT	1 cut(s)	1158
MaeI	CTAG	2 cut(s)	168, 690
MaeII	ACGT	1 cut(s)	1747
MaeIII	GTNAC	8 cut(s)	516, 1149, 1162, 1208, 1372, 1897, 2002, 2231
MalI	GATC	8 cut(s)	630, 725, 1133, 1422, 1916, 1992, 2018, 2330
MbiI	CCGCTC	1 cut(s)	776
MboI	GATC	8 cut(s)	628, 723, 1131, 1420, 1914, 1990, 2016, 2328
MfeI	CAATTG	2 cut(s)	1218, 1281
MhlI	GDGCHC	2 cut(s)	102, 1045
MluI	ACGCGT	1 cut(s)	792
MlyI	GAGTC	4 cut(s)	296, 478, 1401, 1990
MmeI	TCCRAC	2 cut(s)	870, 2018
Mph1103I	ATGCAT	2 cut(s)	990, 1605
MroI	TCCGGA	1 cut(s)	1611
MroXI	GAANNNNTTC	2 cut(s)	2078, 2188
MslI	CAYNNNNRTG	2 cut(s)	1455, 1890
MspI	CCGG	1 cut(s)	1612
MspR9I	CCNGG	2 cut(s)	683, 1160
MunI	CAATTG	2 cut(s)	1218, 1281
MvaI	CCWGG	2 cut(s)	683, 1160
MvnI	CGCG	2 cut(s)	715, 794
MwoI	GCNNNNNNNGC	5 cut(s)	622, 658, 727, 796, 1195
NdeII	GATC	8 cut(s)	628, 723, 1131, 1420, 1914, 1990, 2016, 2328
NlaIV	GGNNCC	1 cut(s)	434
NmuCI	GTSAC	2 cut(s)	1208, 2002
NsiI	ATGCAT	2 cut(s)	990, 1605
NspI	RCATGY	3 cut(s)	1450, 1870, 2214
NspV	TTCGAA	1 cut(s)	13
PciI	ACATGT	1 cut(s)	1866
PdmI	GAANNNNTTC	2 cut(s)	2078, 2188
PfeI	GAWTC	4 cut(s)	1608, 2248, 2293, 2299
PkrI	GCNGC	2 cut(s)	28, 1846
PleI	GAGTC	4 cut(s)	295, 478, 1401, 1990
PpsI	GAGTC	4 cut(s)	295, 478, 1401, 1990
PpuMI	RGGWCCY	1 cut(s)	906
PscI	ACATGT	1 cut(s)	1866
PshAI	GACNNNNGTC	1 cut(s)	2000
PshBI	ATTAAT	1 cut(s)	1695
PsiI	TTATAA	3 cut(s)	207, 957, 1170
Psp124BI	GAGCTC	1 cut(s)	102
Psp1406I	AACGTT	1 cut(s)	1747
Psp5II	RGGWCCY	1 cut(s)	906
Psp6I	CCWGG	2 cut(s)	681, 1158
PspFI	CCCAGC	1 cut(s)	1975
PspGI	CCWGG	2 cut(s)	681, 1158
PspN4I	GGNNCC	1 cut(s)	434
PspPI	GGNCC	1 cut(s)	906
PspPPI	RGGWCCY	1 cut(s)	906
RsaI	GTAC	5 cut(s)	80, 641, 948, 1274, 1287
RsaNI	GTAC	5 cut(s)	79, 640, 947, 1273, 1286
RseI	CAYNNNNRTG	2 cut(s)	1455, 1890
SacI	GAGCTC	1 cut(s)	102
SatI	GCNGC	2 cut(s)	27, 1845
Sau3AI	GATC	8 cut(s)	628, 723, 1131, 1420, 1914, 1990, 2016, 2328
Sau96I	GGNCC	1 cut(s)	906
SchI	GAGTC	4 cut(s)	296, 478, 1401, 1990
ScrFI	CCNGG	2 cut(s)	683, 1160
SduI	GDGCHC	2 cut(s)	102, 1045
SexAI	ACCWGGT	1 cut(s)	1158
SfaNI	GCATC	9 cut(s)	804, 991, 997, 1425, 1590, 1882, 1962, 2191, 2331
SfuI	TTCGAA	1 cut(s)	13
SinI	GGWCC	1 cut(s)	906
SmiMI	CAYNNNNRTG	2 cut(s)	1455, 1890
SmlI	CTYRAG	3 cut(s)	127, 830, 2236
SmoI	CTYRAG	3 cut(s)	127, 830, 2236
SsiI	CCGC	5 cut(s)	63, 616, 721, 776, 824
SspI	AATATT	2 cut(s)	250, 345
SspMI	CTAG	2 cut(s)	168, 690
SstI	GAGCTC	1 cut(s)	102
StyD4I	CCNGG	2 cut(s)	681, 1158
StyI	CCWWGG	1 cut(s)	909
TaaI	ACNGT	7 cut(s)	314, 1069, 1208, 1277, 1477, 1648, 1807
TaiI	ACGT	1 cut(s)	1750
TaqI	TCGA	6 cut(s)	13, 75, 726, 772, 2148, 2278
TatI	WGTACW	3 cut(s)	639, 946, 1285
TfiI	GAWTC	4 cut(s)	1608, 2248, 2293, 2299
TscAI	CASTG	5 cut(s)	319, 617, 1282, 1387, 1917
TseFI	GTSAC	2 cut(s)	1208, 2002
TseI	GCWGC	2 cut(s)	26, 1844
Tsp45I	GTSAC	2 cut(s)	1208, 2002
TspDTI	ATGAA	8 cut(s)	32, 177, 935, 1281, 1559, 1741, 1802, 1935
TspRI	CASTG	5 cut(s)	319, 617, 1282, 1387, 1917
VpaK11BI	GGWCC	1 cut(s)	906
VspI	ATTAAT	1 cut(s)	1695
XagI	CCTNNNNNAGG	2 cut(s)	913, 1085
XapI	RAATTY	4 cut(s)	88, 352, 586, 1223
XceI	RCATGY	3 cut(s)	1450, 1870, 2214
XmnI	GAANNNNTTC	2 cut(s)	2078, 2188
XspI	CTAG	2 cut(s)	168, 690
Zsp2I	ATGCAT	2 cut(s)	990, 1605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.