No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32920 AT1G32928 |
| fragaria_vesca | FvH4_5g10560 FvH4_7g32852 |
| prunus_persica | Prupe.5G133000_v2.0.a1 Prupe.5G133100_v2.0.a1 Prupe.5G133200_v2.0.a1 |
| pyrus_communis | pycom06g11340 pycom06g11350 pycom14g11400 |
| rosa_chinensis | RchiOBHm_Chr1g0382811 RchiOBHm_Chr7g0187591 |
| rosa_laevigata | RLG00000004768 RLG00000004769 RLG00000026157 |
| rosa_multiflora | Rmu_sc0002242.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00267270 Rroxscaffold_4G00277880 |
| rosa_rugosa | Rorug01G0436400 Rorug06G0482800 |
| rosa_samantha | Rh1AG461400 Rh1CG431900 Rh5AG237600 Rh5DG246100 Rh7AG087800 Rh7BG089000 Rh7BG089100 Rh7CG088200 Rh7CG088400 |
| rosa_wichuraiana | Rw0G002620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 84 |
| AccI | GTMKAC | 1 cut(s) | 78 |
| AccII | CGCG | 1 cut(s) | 134 |
| AciI | CCGC | 3 cut(s) | 63, 82, 123 |
| AcsI | RAATTY | 1 cut(s) | 4 |
| AcyI | GRCGYC | 1 cut(s) | 27 |
| AflIII | ACRYGT | 1 cut(s) | 132 |
| AgsI | TTSAA | 1 cut(s) | 168 |
| AluBI | AGCT | 2 cut(s) | 164, 214 |
| AluI | AGCT | 2 cut(s) | 164, 214 |
| Alw21I | GWGCWC | 1 cut(s) | 216 |
| Alw26I | GTCTC | 2 cut(s) | 147, 230 |
| ApeKI | GCWGC | 1 cut(s) | 65 |
| ApoI | RAATTY | 1 cut(s) | 4 |
| AsuHPI | GGTGA | 1 cut(s) | 52 |
| BanII | GRGCYC | 1 cut(s) | 216 |
| BbsI | GAAGAC | 2 cut(s) | 197, 215 |
| Bbv12I | GWGCWC | 1 cut(s) | 216 |
| BbvI | GCAGC | 1 cut(s) | 52 |
| BccI | CCATC | 1 cut(s) | 212 |
| BcoDI | GTCTC | 2 cut(s) | 147, 230 |
| BfmI | CTRYAG | 1 cut(s) | 240 |
| BisI | GCNGC | 1 cut(s) | 66 |
| BlsI | GCNGC | 1 cut(s) | 67 |
| BpiI | GAAGAC | 2 cut(s) | 197, 215 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 190, 222 |
| BpuEI | CTTGAG | 2 cut(s) | 131, 230 |
| BsaHI | GRCGYC | 1 cut(s) | 27 |
| BsaJI | CCNNGG | 1 cut(s) | 197 |
| Bse3DI | GCAATG | 1 cut(s) | 226 |
| BseDI | CCNNGG | 1 cut(s) | 197 |
| BseMI | GCAATG | 1 cut(s) | 226 |
| BseXI | GCAGC | 1 cut(s) | 52 |
| BsgI | GTGCAG | 1 cut(s) | 57 |
| Bsh1236I | CGCG | 1 cut(s) | 134 |
| BsiHKAI | GWGCWC | 1 cut(s) | 216 |
| BsmAI | GTCTC | 2 cut(s) | 147, 230 |
| Bsp1286I | GDGCHC | 1 cut(s) | 216 |
| BspACI | CCGC | 3 cut(s) | 63, 82, 123 |
| BspFNI | CGCG | 1 cut(s) | 134 |
| BsrBI | CCGCTC | 1 cut(s) | 84 |
| BsrDI | GCAATG | 1 cut(s) | 226 |
| BssECI | CCNNGG | 1 cut(s) | 197 |
| BssNI | GRCGYC | 1 cut(s) | 27 |
| BstACI | GRCGYC | 1 cut(s) | 27 |
| BstFNI | CGCG | 1 cut(s) | 134 |
| BstMAI | GTCTC | 2 cut(s) | 147, 230 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 26, 35, 90 |
| BstSFI | CTRYAG | 1 cut(s) | 240 |
| BstUI | CGCG | 1 cut(s) | 134 |
| BstV1I | GCAGC | 1 cut(s) | 52 |
| BstV2I | GAAGAC | 2 cut(s) | 197, 215 |
| CseI | GACGC | 2 cut(s) | 35, 123 |
| CviAII | CATG | 2 cut(s) | 31, 175 |
| CviJI | RGCY | 2 cut(s) | 164, 214 |
| CviKI_1 | RGCY | 2 cut(s) | 164, 214 |
| Ecl136II | GAGCTC | 1 cut(s) | 214 |
| Eco24I | GRGCYC | 1 cut(s) | 216 |
| Eco53kI | GAGCTC | 1 cut(s) | 214 |
| EcoICRI | GAGCTC | 1 cut(s) | 214 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| EcoT38I | GRGCYC | 1 cut(s) | 216 |
| FaeI | CATG | 2 cut(s) | 34, 178 |
| FaiI | YATR | 5 cut(s) | 32, 47, 75, 176, 242 |
| FatI | CATG | 2 cut(s) | 30, 174 |
| FblI | GTMKAC | 1 cut(s) | 78 |
| Fnu4HI | GCNGC | 1 cut(s) | 66 |
| FriOI | GRGCYC | 1 cut(s) | 216 |
| Fsp4HI | GCNGC | 1 cut(s) | 66 |
| GluI | GCNGC | 1 cut(s) | 66 |
| HgaI | GACGC | 2 cut(s) | 35, 123 |
| Hin1I | GRCGYC | 1 cut(s) | 27 |
| Hin1II | CATG | 2 cut(s) | 34, 178 |
| HindIII | AAGCTT | 1 cut(s) | 162 |
| HphI | GGTGA | 1 cut(s) | 52 |
| Hpy166II | GTNNAC | 1 cut(s) | 79 |
| Hpy188I | TCNGA | 1 cut(s) | 88 |
| Hpy188III | TCNNGA | 4 cut(s) | 148, 209, 235, 252 |
| Hpy8I | GTNNAC | 1 cut(s) | 79 |
| Hpy99I | CGWCG | 2 cut(s) | 29, 122 |
| HpyAV | CCTTC | 1 cut(s) | 31 |
| HpyCH4V | TGCA | 1 cut(s) | 38 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 26, 35, 90 |
| Hsp92I | GRCGYC | 1 cut(s) | 27 |
| Hsp92II | CATG | 2 cut(s) | 34, 178 |
| Lsp1109I | GCAGC | 1 cut(s) | 52 |
| MaeIII | GTNAC | 1 cut(s) | 58 |
| MbiI | CCGCTC | 1 cut(s) | 84 |
| MboII | GAAGA | 6 cut(s) | 96, 99, 102, 105, 202, 215 |
| MhlI | GDGCHC | 1 cut(s) | 216 |
| MluCI | AATT | 2 cut(s) | 4, 94 |
| MluI | ACGCGT | 1 cut(s) | 132 |
| MnlI | CCTC | 1 cut(s) | 192 |
| MspA1I | CMGCKG | 1 cut(s) | 65 |
| MvnI | CGCG | 1 cut(s) | 134 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 26, 35, 90 |
| NlaIII | CATG | 2 cut(s) | 34, 178 |
| NmuCI | GTSAC | 1 cut(s) | 58 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 194 |
| PkrI | GCNGC | 1 cut(s) | 67 |
| Psp124BI | GAGCTC | 1 cut(s) | 216 |
| SacI | GAGCTC | 1 cut(s) | 216 |
| SatI | GCNGC | 1 cut(s) | 66 |
| SduI | GDGCHC | 1 cut(s) | 216 |
| SetI | ASST | 3 cut(s) | 166, 203, 216 |
| SfcI | CTRYAG | 1 cut(s) | 240 |
| SgeI | CNNG | 8 cut(s) | 43, 145, 160, 187, 210, 221, 227, 247 |
| SmlI | CTYRAG | 2 cut(s) | 146, 209 |
| SmoI | CTYRAG | 2 cut(s) | 146, 209 |
| Sse9I | AATT | 2 cut(s) | 4, 94 |
| SsiI | CCGC | 3 cut(s) | 63, 82, 123 |
| SstI | GAGCTC | 1 cut(s) | 216 |
| TaqI | TCGA | 4 cut(s) | 8, 24, 216, 234 |
| TasI | AATT | 2 cut(s) | 4, 94 |
| TseFI | GTSAC | 1 cut(s) | 58 |
| TseI | GCWGC | 1 cut(s) | 65 |
| Tsp45I | GTSAC | 1 cut(s) | 58 |
| TspDTI | ATGAA | 3 cut(s) | 17, 171, 215 |
| TspGWI | ACGGA | 1 cut(s) | 106 |
| XapI | RAATTY | 1 cut(s) | 4 |
| XmiI | GTMKAC | 1 cut(s) | 78 |