No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32920 AT1G32928 |
| fragaria_vesca | FvH4_5g10560 FvH4_7g32852 |
| prunus_persica | Prupe.5G133000_v2.0.a1 Prupe.5G133100_v2.0.a1 Prupe.5G133200_v2.0.a1 |
| pyrus_communis | pycom06g11340 pycom06g11350 pycom14g11400 |
| rosa_chinensis | RchiOBHm_Chr1g0382811 RchiOBHm_Chr7g0187591 |
| rosa_laevigata | RLG00000004768 RLG00000004769 RLG00000026157 |
| rosa_multiflora | Rmu_sc0002242.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00267270 Rroxscaffold_4G00277880 |
| rosa_rugosa | Rorug01G0436400 Rorug06G0482800 |
| rosa_samantha | Rh1AG461400 Rh1CG431900 Rh5AG237600 Rh5DG246100 Rh7AG087800 Rh7BG089000 Rh7BG089100 Rh7CG088200 Rh7CG088400 |
| rosa_wichuraiana | Rw0G002620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 101 |
| AfaI | GTAC | 1 cut(s) | 144 |
| AgsI | TTSAA | 1 cut(s) | 28 |
| AjnI | CCWGG | 2 cut(s) | 57, 152 |
| AluBI | AGCT | 4 cut(s) | 19, 24, 83, 169 |
| AluI | AGCT | 4 cut(s) | 19, 24, 83, 169 |
| Alw21I | GWGCWC | 1 cut(s) | 183 |
| Alw44I | GTGCAC | 1 cut(s) | 179 |
| ApaLI | GTGCAC | 1 cut(s) | 179 |
| ApeKI | GCWGC | 2 cut(s) | 121, 124 |
| AspLEI | GCGC | 1 cut(s) | 163 |
| AsuHPI | GGTGA | 2 cut(s) | 80, 141 |
| AsuII | TTCGAA | 1 cut(s) | 189 |
| BaeGI | GKGCMC | 1 cut(s) | 183 |
| Bbv12I | GWGCWC | 1 cut(s) | 183 |
| BbvI | GCAGC | 2 cut(s) | 133, 136 |
| BccI | CCATC | 2 cut(s) | 91, 167 |
| BceAI | ACGGC | 1 cut(s) | 58 |
| BciT130I | CCWGG | 2 cut(s) | 59, 154 |
| BisI | GCNGC | 2 cut(s) | 122, 125 |
| BlpI | GCTNAGC | 1 cut(s) | 20 |
| BlsI | GCNGC | 2 cut(s) | 123, 126 |
| Bme1390I | CCNGG | 2 cut(s) | 59, 154 |
| BmrFI | CCNGG | 2 cut(s) | 59, 154 |
| BpmI | CTGGAG | 1 cut(s) | 185 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 20 |
| Bpu14I | TTCGAA | 1 cut(s) | 189 |
| BsaJI | CCNNGG | 2 cut(s) | 57, 152 |
| Bse118I | RCCGGY | 1 cut(s) | 65 |
| BseBI | CCWGG | 2 cut(s) | 59, 154 |
| BseDI | CCNNGG | 2 cut(s) | 57, 152 |
| BseGI | GGATG | 1 cut(s) | 178 |
| BseMII | CTCAG | 1 cut(s) | 11 |
| BseSI | GKGCMC | 1 cut(s) | 183 |
| BseXI | GCAGC | 2 cut(s) | 133, 136 |
| BsiHKAI | GWGCWC | 1 cut(s) | 183 |
| BsiSI | CCGG | 1 cut(s) | 66 |
| Bsp119I | TTCGAA | 1 cut(s) | 189 |
| Bsp1286I | GDGCHC | 1 cut(s) | 183 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 20 |
| BspACI | CCGC | 1 cut(s) | 101 |
| BspCNI | CTCAG | 1 cut(s) | 12 |
| BspT104I | TTCGAA | 1 cut(s) | 189 |
| BsrFI | RCCGGY | 1 cut(s) | 65 |
| BssAI | RCCGGY | 1 cut(s) | 65 |
| BssECI | CCNNGG | 2 cut(s) | 57, 152 |
| Bst2UI | CCWGG | 2 cut(s) | 59, 154 |
| Bst4CI | ACNGT | 1 cut(s) | 185 |
| BstBI | TTCGAA | 1 cut(s) | 189 |
| BstDEI | CTNAG | 1 cut(s) | 20 |
| BstF5I | GGATG | 1 cut(s) | 178 |
| BstHHI | GCGC | 1 cut(s) | 163 |
| BstNI | CCWGG | 2 cut(s) | 59, 154 |
| BstSCI | CCNGG | 2 cut(s) | 57, 152 |
| BstSLI | GKGCMC | 1 cut(s) | 183 |
| BstV1I | GCAGC | 2 cut(s) | 133, 136 |
| BtsCI | GGATG | 1 cut(s) | 178 |
| BtsIMutI | CAGTG | 2 cut(s) | 181, 205 |
| CfoI | GCGC | 1 cut(s) | 163 |
| Cfr10I | RCCGGY | 1 cut(s) | 65 |
| Csp6I | GTAC | 1 cut(s) | 143 |
| CviJI | RGCY | 4 cut(s) | 19, 24, 83, 169 |
| CviKI_1 | RGCY | 4 cut(s) | 19, 24, 83, 169 |
| CviQI | GTAC | 1 cut(s) | 143 |
| DdeI | CTNAG | 1 cut(s) | 20 |
| EcoRII | CCWGG | 2 cut(s) | 57, 152 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 8, 40 |
| FauI | CCCGC | 1 cut(s) | 94 |
| Fnu4HI | GCNGC | 2 cut(s) | 122, 125 |
| FokI | GGATG | 1 cut(s) | 185 |
| Fsp4HI | GCNGC | 2 cut(s) | 122, 125 |
| GlaI | GCGC | 1 cut(s) | 162 |
| GluI | GCNGC | 2 cut(s) | 122, 125 |
| GsuI | CTGGAG | 1 cut(s) | 185 |
| HapII | CCGG | 1 cut(s) | 66 |
| HhaI | GCGC | 1 cut(s) | 163 |
| Hin6I | GCGC | 1 cut(s) | 161 |
| HinP1I | GCGC | 1 cut(s) | 161 |
| HindIII | AAGCTT | 1 cut(s) | 81 |
| HpaII | CCGG | 1 cut(s) | 66 |
| HphI | GGTGA | 2 cut(s) | 80, 141 |
| Hpy166II | GTNNAC | 2 cut(s) | 113, 181 |
| Hpy8I | GTNNAC | 2 cut(s) | 113, 181 |
| Hpy99I | CGWCG | 1 cut(s) | 97 |
| HpyAV | CCTTC | 1 cut(s) | 132 |
| HpyCH4III | ACNGT | 1 cut(s) | 185 |
| HpyCH4V | TGCA | 1 cut(s) | 181 |
| HpyF3I | CTNAG | 1 cut(s) | 20 |
| HspAI | GCGC | 1 cut(s) | 161 |
| LmnI | GCTCC | 1 cut(s) | 166 |
| LpnPI | CCDG | 7 cut(s) | 44, 71, 79, 139, 149, 155, 166 |
| Lsp1109I | GCAGC | 2 cut(s) | 133, 136 |
| MboII | GAAGA | 2 cut(s) | 78, 194 |
| MhlI | GDGCHC | 1 cut(s) | 183 |
| MnlI | CCTC | 1 cut(s) | 19 |
| MspI | CCGG | 1 cut(s) | 66 |
| MspR9I | CCNGG | 2 cut(s) | 59, 154 |
| MvaI | CCWGG | 2 cut(s) | 59, 154 |
| NspV | TTCGAA | 1 cut(s) | 189 |
| PkrI | GCNGC | 2 cut(s) | 123, 126 |
| Psp6I | CCWGG | 2 cut(s) | 57, 152 |
| PspGI | CCWGG | 2 cut(s) | 57, 152 |
| RsaI | GTAC | 1 cut(s) | 144 |
| RsaNI | GTAC | 1 cut(s) | 143 |
| SatI | GCNGC | 2 cut(s) | 122, 125 |
| ScrFI | CCNGG | 2 cut(s) | 59, 154 |
| SduI | GDGCHC | 1 cut(s) | 183 |
| SetI | ASST | 6 cut(s) | 21, 26, 63, 85, 158, 171 |
| SfuI | TTCGAA | 1 cut(s) | 189 |
| SsiI | CCGC | 1 cut(s) | 101 |
| StyD4I | CCNGG | 2 cut(s) | 57, 152 |
| TaaI | ACNGT | 1 cut(s) | 185 |
| TaqI | TCGA | 2 cut(s) | 95, 189 |
| TscAI | CASTG | 1 cut(s) | 188 |
| TseI | GCWGC | 2 cut(s) | 121, 124 |
| TspDTI | ATGAA | 2 cut(s) | 22, 78 |
| TspRI | CASTG | 1 cut(s) | 188 |
| VneI | GTGCAC | 1 cut(s) | 179 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 160 |