AT1G48090

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0002758
Physical Location & Seq
Reverse (-)
17732010 .. 17758508
26499 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G48090.4

Sequence Viewer

Length: 12441 bp
ATGTTTGAAGCTCATTTCGATGTTGTGATTCTGGCATCTATGAGAGCAGCAATGGTAGCTGTTACTGGAGAAGTACTGCATCTGCTTCGGAGGTATTTGGGTGAATATGTGCATGGACTCTCCACAGAGGCTCTGAGAATTAGTGTCTGGAAAGGTGATGTTGTTCTTAAAGATTTGAAGTTAAAGGCGGAAGCTCTTAATTCACTGAAGCTTCCAGTAGCTGTCAAATCTGGTTTTGTTGGAACCATCACTTTGAAGGTCCCTTGGAAAAGTTTAGGCAAAGAGCCAGTCATTGTTCTGATCGATCGTGTCTTCGTTCTTGCTTATCCTGCCCCTGATGACCGAACACTTAAGGAGGAAGACAGGGAAAAGCTTCTAGAAACCAAGCTTCAGCAGATCGAGGAAGCAGAAACAGCAACTCTTGAAGCAAGGGCAAAGTCTAAGCTGGGAAGTCCTCCACAAGGGAATTCATGGCTAGGCTCAATTATTGCTACAATTATTGGTAATCTGAAAGTATCCATCAGCAATGTACATATAAGATACGAGGATTCTACCAGTAATCCAGGGCACCCCTTTGCTGCGGGCATCACCTTGGCCAAGCTCGCAGCTGTTACAATGGATGAAGAAGGAAATGAAACCTTTGACACAAGTGGCGCTTTGGATAAACTGCGTAAGTTCAAGGGCTCTTCTCCCAGAGGTTTCAAGTACAATAAAAACATTGATTGGGCTTTTAAAATGAATTCGTTGCAGCTTGAGAGGCTCGCTCTGTATCATGATTCTAATAGCTTTCCCTGGGAAATAGAGAAGCAATGGGACAATATTACTCCTGAGGAATGGATTGAGATGTTTGAAGATGGCATAAAGGAGCAGACCGAGCATAAAATAAAGTCAAAATGGGCCTTGAATCGTCACTATCTATTGTCCCCTATCAATGGATCTCTTAAATATCACCGGTTAGGAAATCAGGAGAGAAATAATCCGGAGATTCCATTTGAAAGGGCATCAGTTATCCTTAATGATGTTAACGTGACTATCACAGAGGAGCAATATCATGATTGGATAAAGCTAGTCGAAGTTGTCTCCAGATACAAAACATATATAGAGATTTCACATTTAAGGCCTATGGTTCCTGTTTCAGAAGCTCCACGTCTGTGGTGGCGGTTTGCTGCTCAAGCTAGTTTACAACAAAAGAGATTATGCTATCGATTTTCCTGGGATAGCATTCACCATCTTTGCCAGTTACGTAGGCGCTATATTCAGCTGTATGCCAATTTTCTGCAGCAGTCATCAGATGTTAATTACCCAGAGATGAGAGAAATCGAAAAGGACCTTGATTCCAAAGTGATTCTTTTGTGGAGGTTGCTTGCACATGCAAAGGTAGAATCTGTAAAGTCAAAAGAAGCAGCTGAGCAGAGAAAGCTGAAAAAGGGTGGTTGGTTCTCATTCAACTGGCGGACAGAAGCTGAAGATGACCCTGAGGTAGATAGTGTGGCTGGCGGATCAAAATTGATGGAGGAAAGATTGACTAAAGATGAATGGAAGGCCATAAATAAGTTACTGAGTCATCAGCCAGATGAAGAGATGAATTTGTATTCAGGAAAAGACATGCAGAATATGACTCACTTTCTTGTAACGGTATCAATTGGTCAAGGTGCGGCTAGGATTGTTGATATAAATCAGACTGAGGTGCTGTGTGGTAGGTTTGAGCAGCTCGATGTGACGACCAAGTTCAGACATCGAAGTACTCAGTGTGATGTATCACTGAGGTTCTATGGCTTATCTGCACCAGAAGGTTCTCTAGCGCAGAGTGTATCCAGTGAGAGAAAGACCAATGCCTTGATGGCTAGTTTTGTGAACGCACCAATTGGAGAGAACATTGATTGGAGGCTATCAGCCACGATATCCCCTTGTCATGCTACGATATGGACTGAAAGTTATGATCGTGTATTAGAGTTTGTGAAGCGAAGTAATGCAGTTAGCCCTACTGTTGCGCTGGAAACTGCTGCTGTGCTTCAGATGAAACTAGAGGAAGTGACTCGACGGGCTCAAGAGCAACTTCAAATAGTATTGGAGGAGCAAAGCAGATTTGCTCTCGACATTGATATTGATGCTCCAAAGGTGAGAATTCCTTTGAGGGCTTCAGGATCGTCCAAGTGCAGTAGCCATTTCCTATTGGATTTTGGTAATTTTACGTTAACCACCATGGATACTCGGTCTGAGGAGCAGAGGCAAAACTTATATTCCCGGTTCTGCATTTCGGGAAGAGATATTGCTGCTTTCTTTACAGACTGTGGATCTGACAACCAAGGTTGCAGTTTAGTCATGGAAGATTTCACTAATCAGCCAATTCTGTCTCCCATTCTAGAGAAAGCGGACAATGTTTATTCCCTTATTGATAGGTGTGGAATGGCAGTTATTGTTGATCAGATCAAAGTACCTCACCCAAGTTACCCATCTACTAGAATATCGATCCAAGTGCCAAATATTGGTGTTCATTTCTCTCCAACAAGATATATGAGGATCATGCAATTGTTCGACATCTTGTATGGTGCTATGAAAACCTACAGTCAAGCTCCTGTTGATCACATGCCAGATGGAATCCAACCTTGGAGTCCTACAGATCTTGCTAGTGATGCTAGAATCTTAGTTTGGAAGGGAATTGGCAACTCTGTTGCTACTTGGCAATCTTGTCGCCTTGTTCTATCTGGTTTATATCTGTATACATTTGAATCAGAGAAGTCACTTGATTATCAACGTTATTTATGCATGGCTGGTAGGCAAGTATTCGAGGTTCCACCCGCAAATATTGGTGGTTCTCCATACTGTCTTGCTGTCGGTGTAAGGGGAACAGATCTTAAAAAGGCCCTGGAATCTTCTAGCACCTGGATCATAGAATTTCAGGGGGAGGAGAAGGCAGCTTGGCTGAGAGGACTGGTCCAAGCCACCTATCAAGCTTCTGCTCCTTTGTCGGGGGATGTACTTGGTCAAACGAGTGATGGTGATGGTGACTTCCATGAACCTCAGACCAGGAATATGAAAGCTGCTGATCTTGTTATTACTGGTGCTTTGGTTGAGACGAAGTTGTACTTGTATGGAAAGATCAAGAATGAATGCGATGAGCAGGTTGAAGAGGTTCTGCTTCTTAAAGTTCTTGCTTCCGGAGGAAAGGTGCACTTGATAAGTTCCGAGAGTGGCTTAACTGTTAGAACAAAGTTGCACTCTCTGAAAATCAAAGATGAACTCCAGCAGCAGCAGTCAGGAAGTGCTCAGTATTTAGCTTACTCGGTCCTGAAGAACGAAGACATACAAGAATCATTAGGAACATGTGATTCTTTCGACAAGGAGATGCCTGTAGGACATGCAGATGATGAAGATGCCTACACAGATGCTTTACCAGAGTTTCTGTCACCTACAGAACCAGGTACTCCGGATATGGATATGATTCAATGCAGCATGATGATGGACTCCGATGAACATGTGGGACTCGAGGATACTGAAGGAGGGTTTCATGAAAAAGATACATCTCAGGGAAAAAGTCTTTGCGATGAGGTATTTTATGAGGTGCAGGGTGGTGAATTTTCTGATTTTGTGTCAGTTGTTTTCTTGACGAGGAGCTCCAGTTCCCACGATTATAATGGAATTGATACACAGATGAGCATTCGCATGTCAAAACTGGAGTTCTTTTGCAGCAGACCAACTGTTGTTGCTCTAATTGGTTTTGGATTTGATTTGAGCACTGCATCATATATCGAAAATGATAAAGATGCCAACACTTTGGTACCTGAGAAATCTGATAGTGAGAAAGAAACAAATGATGAAAGTGGGCGCATTGAAGGCTTACTTGGATATGGCAAGGATCGTGTAGTGTTTTACCTGAACATGAATGTTGATAATGTGACTGTGTTTCTCAACAAGGAGGATGGTTCTCAGCTTGCGATGTTTGTGCAGGAACGATTTGTGTTGGACATTAAGGTTCACCCGAGCTCTCTTTCAGTAGAAGGGACTCTGGGAAATTTTAAACTCTGTGACAAGTCGTTAGACTCTGGAAACTGTTGGAGTTGGCTCTGTGACATACGAGATCCTGGTGTTGAGTCTCTTATCAAGTTCAAATTCAGTTCATATAGTGCTGGCGACGACGACTATGAAGGATATGATTATAGCTTATCTGGTAAACTATCGGCTGTTCGCATTGTATTTCTCTACAGATTTGTTCAAGAGGTTACAGCATATTTCATGGGACTTGCTACTCCTCATTCTGAAGAAGTCATTAAACTTGTTGACAAAGTTGGAGGCTTTGAGTGGCTAATCCAGAAAGATGAAATGGATGGTGCTACTGCGGTGAAACTGGACCTTTCGTTAGACACTCCAATAATTGTTGTCCCTAGAGATTCTCTGAGCAAGGATTACATTCAACTTGACCTTGGTCAGCTGGAGGTATCAAATGAAATAAGTTGGCATGGGTGTCCGGAGAAAGATGCCACTGCTGTACGTGTAGATGTTCTTCATGCGAAGATTCTTGGACTAAATATGTCGGTAGGCATAAATGGTTCAATTGGTAAACCAATGATACGTGAAGGACAGGGATTGGACATTTTTGTCCGGCGCAGCCTAAGAGATGTTTTTAAGAAAGTCCCAACACTTTCGGTTGAGGTTAAGATTGATTTCTTGCATGCTGTGATGTCTGACAAAGAATATGATATTATTGTAAGTTGCACATCCATGAATTTGTTTGAGGAGCCAAAGCTACCTCCAGATTTCCGTGGTAGCAGTTCTGGTCCCAAAGCTAAAATGCGTCTACTGGCTGACAAAGTCAACTTGAATAGTCAGATGATTATGTCACGTACAGTTACCATACTGGCTGTTGATATCAATTATGCTCTTCTCGAGTTACGTAATAGTGTTAATGAAGAGTCATCATTAGCTCATGTTGCGCTTGAAGGATTATGGGTATCCTACAGGATGACATCACTATCTGAGACAGACTTGTATGTGTCAGTTCCTAAAGTTTCTGTTCTTGATATCCGCCCTAACACAAAGCCTGAAATGCGACTGATGCTCGGCTCATCGGTCGATGCTTCCAAGCAGGCTTCTTCTGAATCTCTTCCCTTTTCCCTTAATAAGGGAAGCTTTAAGCGAGCCAACTCTAGGGCTGTTCTTGATTTTGATGCACCATGTTCAACGATGTTGCTGATGGATTATAGATGGCGAGCATCCTCTCAGTCATGTGTTTTGCGGGTGCAACAACCTCGTATCCTTGCTGTTCCTGACTTCCTTCTTGCGGTTGGTGAATTTTTTGTTCCAGCTTTGCGTGCAATAACAGGAAGAGATGAAACATTAGATCCAACAAATGATCCTATCACCAGAAGTAGAGGCATAGTTCTCTCTGAGCCACTCTATAAACAGACAGAAGATGTTGTGCACTTGTCCCCACGTAGACAATTAGTAGCAGATTCACTGGGCATTGATGAGTATACCTATGACGGATGCGGAAAGGTAATCTCGTTGAGTGAGCAAGGAGAGAAGGATTTAAACGTAGGAAGATTAGAACCCATCATAATCGTTGGGCATGGAAAGAAGCTGCGCTTCGTCAATGTGAAAATTAAGAATGGATCGCTTCTGAGCAAGTGCATTTATTTGAGTAACGATAGTAGCTGTTTATTTTCTCCGGAAGATGGTGTTGACATCTCAATGTTAGAAAATGCCTCATCTAATCCGGAGAATGTGCTTAGCAATGCGCACAAATCATCAGATGTTTCAGACACTTGTCAATATGATTCGAAGTCTGGTCAGAGTTTTACCTTTGAAGCTCAGGTTGTATCTCCTGAGTTCACGTTCTTTGACGGTACAAAGTCATCTCTGGATGACTCTTCTGCTGTAGAAAAGCTTTTGCGAGTGAAATTGGATTTTAATTTTATGTATGCCTCAAAAGAAAAAGACATCTGGGTTCGAGCCTTGCTAAAGAACCTGGTTGTTGAAACTGGGTCTGGTCTTATCATTCTTGATCCAGTCGATATCTCTGGGGGATACACTTCTGTTAAAGAGAAAACAAATATGTCCTTAACCTCCACTGACATATACATGCACCTTTCTTTGAGTGCTCTTTCTCTCCTACTGAATCTGCAGAGCCAAGTAACTGGAGCTTTACAATCTGGAAATGCTATTCCTTTAGCTTCATGCACCAACTTTGACAGGATTTGGGTCTCACCAAAAGAAAATGGACCTAGGAACAACCTCACAATTTGGAGGCCGCAGGCTCCTTCAAACTATGTCATATTGGGAGACTGTGTGACGTCAAGGGCAATTCCTCCTACACAAGCTGTAATGGCAGTAAGTAATACATATGGGCGTGTGAGGAAGCCGATTGGGTTTAATCGTATTGGCCTGTTCTCTGTTATTCAAGGTTTAGAAGGGGATAATGTTCAGCATTCCCATAATAGCAATGAGTGTTCCCTCTGGATGCCTGTAGCTCCTGTAGGGTACACTGCTATGGGTTGTGTTGCAAATATAGGAAGTGAGCAACCACCTGATCACATTGTTTATTGTCTAAGCATTTGGCGTGCTGATAATGTTCTTGGAGCATTCTATGCTCACACTTCAACTGCAGCTCCTTCCAAAAAATATAGCCCTGGCCTCAGTCATTGTCTTCTTTGGAATCCCCTTCAGTCCAAGACATCTTCATCCTCTGACCCATCATCGACAAGTGGGTCCCGGAGTGAGCAATCAAGTGATCAGACTGGAAATTCATCAGGATGGGACATTCTCAGGTCAATTTCTAAGGCAACTAGTTATCATGTTTCAACTCCTAATTTTGAGAGAATCTGGTGGGACAAAGGTGGTGATCTTCGAAGACCTGTCTCAATATGGAGGCCTGTTCCACGTCCTGGTTTTGCAATATTGGGTGATAGCATAACTGAAGGATTGGAGCCACCTGCACTGGGAATACTCTTCAAAGCAGATGACTCTGAGATTGCTGCAAAACCTGTACAGTTCAATAAAGTCGCACATATTGTGGGGAAAGGTTTCGATGAAGTTTTCTGCTGGTTTCCTGTTGCACCTCCTGGTTATGTTTCTCTAGGATGTGTTCTCTCTAAATTTGATGAAGCGCCTCATGTCGATTCGTTTTGTTGTCCAAGGATTGATCTTGTTAACCAGGCCAACATTTATGAAGCGTCTGTCACGAGATCTTCAAGTTCAAAGTCCTCTCAACTCTGGAGCATTTGGAAAGTTGACAATCAGGCATGTACTTTTCTTGCACGTTCTGATCTTAAAAGACCTCCAAGTCGAATGGCTTTCGCTGTTGGAGAATCTGTAAAGCCGAAGACACAGGAAAATGTAAATGCAGAAATTAAGCTGAGATGCTTCTCCCTGACACTTCTAGATGGATTACATGGAATGATGACTCCTCTCTTTGACACAACTGTCACCAATATCAAGCTAGCAACTCATGGTCGTCCTGAGGCCATGAATGCAGTACTCATTTCCTCAATTGCTGCTTCAACATTTAACCCGCAGTTGGAAGCGTGGGAGCCCCTTCTGGAGCCATTTGATGGAATATTCAAGTTGGAAACATATGATACTGCTTTGAACCAATCGTCAAAGCCAGGAAAACGGCTGCGAATTGCTGCTACTAACATTTTGAACATAAATGTTAGTGCTGCAAACCTTGAAACTCTTGGCGATGCCGTTGTTTCCTGGAGAAGGCAATTAGAACTTGAAGAAAGAGCGGCCAAAATGAAAGAAGAATCAGCTGCCTCTCGTGAGAGTGGGGATCTTTCAGCTTTTTCAGCTCTTGATGAAGATGATTTTCAGACGATTGTGGTAGAGAATAAACTCGGCCGTGACATTTATCTGAAAAAGCTGGAGGAGAACTCAGATGTAGTTGTGAAATTGTGTCACGATGAAAACACTTCTGTCTGGGTTCCCCCTCCAAGGTTCTCCAATCGGTTAAATGTTGCAGACAGTTCTAGAGAAGCACGCAATTACATGACTGTACAGATTCTTGAGGCTAAGGGTTTGCATATTATTGATGATGGTAACAGTCACAGTTTCTTTTGCACCCTACGCCTCGTTGTTGATAGTCAGGGTGCAGAACCACAAAAGCTTTTTCCTCAAAGTGCTAGGACAAAGTGTGTCAAGCCTTCCACTACAATTGTCAACGACTTGATGGAGTGCACTTCCAAGTGGAATGAACTTTTTATTTTTGAAATTCCACGGAAGGGAGTTGCCAGATTGGAGGTTGAGGTCACAAACCTTGCTGCTAAAGCTGGAAAAGGGGAGGTCGTCGGGTCACTTTCGTTTCCTGTTGGACATGGGGAAAGTACGCTTAGAAAGGTAGCTTCAGTAAGGATGCTACATCAATCAAGTGATGCCGAGAATATAAGTTCGTATACGCTTCAGAGAAAGAATGCTGAAGATAAACATGACAACGGGTGCTTGCTTATCTCAACATCTTACTTTGAGAAGACGACAATCCCGAACACACTAAGAAATATGGAAAGTAAGGATTTTGTTGACGGAGACACTGGTTTCTGGATCGGGGTTCGTCCTGATGACTCATGGCATAGCATTCGCTCACTGCTTCCGCTCTGTATTGCTCCGAAATCACTACAAAATGATTTTATTGCAATGGAAGTTTCTATGAGAAATGGGAGAAAGCACGCAACATTCAGATGTTTAGCTACAGTTGTAAATGATTCAGATGTCAATTTAGAGATATCTATATCTTCCGATCAGAATGTCTCTTCTGGAGTAAGCAATCATAATGCTGTGATTGCCTCTAGATCTTCATATGTTTTGCCATGGGGATGTTTATCAAAGGATAATGAACAGTGCCTGCATATCCGGCCAAAGGTTGAAAACTCTCATCATTCTTATGCATGGGGTTATTGCATCGCAGTGAGTTCTGGTTGCGGAAAAGATCAACCATTTGTTGATCAAGGTTTACTGACTCGGCAGAATACAATCAAACAAAGCAGCAGGGCATCTACATTTTTTTTGAGATTAAACCAGCTTGAGAAGAAGGATATGCTTTTCTGCTGCCAGCCTTCTACTGGGAGTAAGCCATTATGGCTCAGTGTAGGAGCAGATGCGTCAGTTCTTCATACAGACCTCAATACACCAGTTTATGATTGGAAAATTTCTATTAGTTCTCCTTTAAAGCTAGAAAATAGACTTCCATGTCCTGTCAAATTCACAGTGTGGGAAAAGACAAAAGAAGGCACATATCTCGAGAGACAACATGGTGTAGTATCCTCAAGGAAGAGTGCTCATGTATATTCAGCAGATATTCAGAGACCTGTATATCTTACGTTAGCTGTCCATGGCGGTTGGGCTTTGGAAAAGGATCCTATTCCTGTTTTAGATATATCTTCAAACGACAGCGTGTCATCATTTTGGTTCGTCCATCAACAGAGCAAAAGGAGATTGCGTGTAAGTATAGAACGTGATGTGGGAGAAACAGGGGCTGCACCAAAGACTATAAGGTTCTTTGTCCCATACTGGATTACAAACGATTCCTATCTTCCACTAAGCTATAGAGTGGTGGAGATTGAACCTTCAGAAAATGTGGAAGCTGGCTCCCCCTGTCTGACTAGGGCTTCCAAATCTTTTAAGAAAAATCCTGTTTTTTCGATGGAGAGAAGACACCAGAAGAAAAATGTCCGAGTGCTTGAGTCTATTGAGGATACTAGTCCTATGCCTAGCATGCTTTCTCCACAAGAATCAGCTGGCCGGAGTGGCGTTGTACTGTTTCCGTCTCAGAAGGATTCTTATGTCTCTCCACGAATTGGTATTGCTGTCGCAGCTAGGGATTCTGATAGTTACAGTCCTGGAATTTCTCTCCTTGAGCTTGAGAAGAAGGAACGCATAGATGTAAAGGCATTCTGCAAAGACGCCTCATACTACATGCTCTCGGCAGTATTAAACATGACATCTGACAGAACAAAGGTTATTCATCTCCAACCACACACCTTATTTATCAACAGGGTGGGCGTGAGCATCTGTCTTCAACAGTGCGATTGTCAGACAGAAGAATGGATTAATCCTTCTGATCCTCCGAAACTCTTTGGATGGCAGTCTTCCACCCGGCTTGAGTTACTGAAATTACGAGTGAAGGGATATAGATGGAGCACGCCATTCAGCGTCTTTAGCGAAGGTACAATGCGTGTTCCTGTTCCAAAAGAAGATGGGACTGATCAATTGCAGCTAAGAGTACAAGTCAGAAGCGGGACAAAGAACTCACGTTATGAAGTTATCTTCAGGCCGAACTCTATCTCTGGCCCTTACAGGATCGAAAACCGTTCCATGTTTCTTCCTATTCGCTATCGCCAAGTGGAAGGTGTCAGCGAGTCTTGGCAATTTCTTCCTCCTAATGCGGCTGCTTCGTTTTATTGGGAAAATCTTGGTAGACGACATCTATTTGAACTTCTTGTTGATGGAAACGATCCTTCTAATTCAGAAAAGTTCGATATTGATAAGATAGGTGATTATCCACCACGAAGTGAAAGTGGACCTACCAGACCCATACGAGTTACTATTTTAAAGGAAGACAAAAAGAATATTGTCAGAATCAGTGACTGGATGCCAGCAATTGAGCCTACTTCAAGCATAAGCAGAAGACTTCCAGCATCATCCCTGTCAGAATTATCTGGAAATGAGTCTCAGCAATCTCATCTTTTGGCCTCAGAAGATTCTGAGTTTCATGTTATTGTTGAGCTTGCTGAACTTGGAATCTCCGTAATCGACCATGCTCCTGAGGAAATACTGTACATGTCAGTGCAAAACCTCTTTGTGGCATATTCAACCGGCTTGGGCTCTGGACTTAGCAGGTTCAAACTAAGGATGCAAGGAATACAAGTTGATAACCAATTGCCATTGGCTCCAATGCCAGTTCTGTTCAGACCACAGCGAACCGGAGATAAAGCTGATTATATTTTGAAGTTTTCTGTTACTTTGCAATCAAATGCTGGCCTTGATCTCCGTGTCTACCCGTATATAGATTTCCAAGGACGTGAAAATACTGCCTTTCTGATAAACATCCATGAACCTATTATCTGGCGCATTCATGAGATGATCCAGCAAGCCAACTTGAGTAGACTATCCGATCCTAACTCGACGGCTGTATCAGTTGATCCATTCATTCAAATCGGAGTTCTTAACTTCTCGGAAGTTAGATTTAGAGTATCCATGGCGATGTCCCCCAGTCAAAGGCCGAGGGGAGTGCTTGGATTTTGGTCATCCCTGATGACTGCTCTTGGGAATACAGAAAACATGCCAGTACGCATAAGTGAGAGATTTCATGAGAACATATCCATGCGCCAAAGTACTATGATCAATAATGCTATTAGGAACGTAAAGAAAGACCTCCTTGGCCAGCCTCTTCAGTTGCTCTCAGGTGTTGATATTCTTGGCAATGCAAGCAGCGCGCTTGGACATATGAGTCAAGGCATAGCTGCATTATCAATGGATAAAAAATTCATCCAAAGTCGACAGAGACAGGAAAACAAAGGTGTTGAGGACTTTGGCGATATTATCAGAGAAGGAGGTGGAGCTCTAGCGAAAGGCCTGTTTAGAGGAGTCACAGGCATATTGACAAAGCCTCTCGAAGGTGCAAAGTCTTCTGGTGTCGAAGGCTTTGTCTCTGGGTTTGGGAAAGGAATCATTGGTGCTGCTGCCCAGCCTGTGAGCGGAGTTCTGGATCTTCTGTCAAAGACCACTGAAGGTGCAAATGCCATGAGGATGAAAATAGCAGCTGCCATCACCTCAGATGAACAACTTCTTCGCCGGAGACTTCCAAGAGCGGTTGGTGCTGATAGCTTGCTTCGTCCTTACAATGATTACAGGGCACAGGGGCAGGTCATATTGCAGTTGGCAGAATCTGGATCATTCCTGGGCCAGGTTGATCTGTTTAAAGTACGTGGGAAGTTTGCATTAACAGATGCCTACGAAAGTCATTTCATCCTACCAAAAGGAAAAGTTCTGATGATCACACATCGAAGAGTGATATTGCTACAACAACCCTCCAACATAATGGGCCAAAGAAAGTTTATTCCGGCAAAAGATGCGTGTTCTATACAGTGGGATATTCTATGGAATGATCTGGTAACCATGGAACTGAGTGACGGGAAAAAAGACCCACCTAACTCTCCACCTTCGCGGCTTATTCTCTATCTGAAAGCAAAGCCACATGACCCGAAGGAACAATTCCGTGTTGTCAAATGCATTCCCAACAGCAAGCAGGCCTTTGATGTTTACTCAGCTATCGATCAAGCCATTAACTTGTATGGGCAGAATGCTTTAAAGGGAATGGTGAAAAACAAAGTGACAAGACCATATTCCCCAATTTCTGAGAGTTCTTGGGCTGAAGGAGCTTCTCAACAAATGCCAGCTTCAGTTACACCATCTTCAACCTTTGGCACTAGCCCTACGACCAGCTCAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Chorein_N Pex24p SHR-BD VPS13 VPS13_C VPS13_mid_rpt Vps62

Protein Analysis

4146

Amino Acids

462.01

Weight (kDa)

6.04

Isoelectric Point (pI)

46.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 1 - 510 1.5e-99 VPS13-like family N-terminal region
ATG2_CAD PF13329 8 - 220 1.5e-08 Autophagy-related protein 2
VPS13_N PF12624 565 - 701 1.1e-06 VPS13-like family N-terminal region
VPS13_M PF25033 1346 - 1730 1.5e-10 VPS13-like family middle region
Vps62 PF06101 2004 - 2172 1.9e-12 Vacuolar protein sorting-associated protein 62
Vps62 PF06101 2255 - 2395 1.1e-08 Vacuolar protein sorting-associated protein 62
VPS13_M PF25033 2388 - 2549 1.3e-07 VPS13-like family middle region
VPS13_VAB PF25036 2858 - 3427 7.3e-25 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3915 - 4026 2e-12 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3633
AarI CACCTGC 1 cut(s) 6937
AasI GACNNNNNNGTC 6 cut(s) 4595, 6703, 7278, 7418, 9177, 11436
AatII GACGTC 1 cut(s) 6293
Acc16I TGCGCA 1 cut(s) 5736
Acc36I ACCTGC 4 cut(s) 3112, 6937, 10815, 11842
Acc65I GGTACC 1 cut(s) 3778
AccB1I GGYRCC 2 cut(s) 567, 3778
AccB7I CCANNNNNTGG 4 cut(s) 2486, 6881, 7547, 9785
AccBSI CCGCTC 4 cut(s) 7724, 8584, 11685, 11798
AccI GTMKAC 9 cut(s) 2720, 4795, 5434, 5471, 8387, 10405, 10983, 11092, 11485
AccII CGCG 2 cut(s) 11423, 12154
AccIII TCCGGA 6 cut(s) 979, 3158, 3427, 4465, 5665, 5713
AclI AACGTT 1 cut(s) 2755
AcoI YGGCCR 6 cut(s) 594, 7725, 7834, 8843, 9727, 11368
AcyI GRCGYC 2 cut(s) 6290, 9891
AdeI CACNNNGTG 2 cut(s) 9198, 10499
AflII CTTAAG 1 cut(s) 350
AflIII ACRYGT 4 cut(s) 3323, 3475, 4489, 10767
AgeI ACCGGT 1 cut(s) 951
AhdI GACNNNNNGTC 1 cut(s) 9382
AhlI ACTAGT 2 cut(s) 6782, 9686
AjiI CACGTC 3 cut(s) 1148, 6878, 11009
AjuI GAANNNNNNNTTGG 6 cut(s) 2590, 2622, 2632, 2664, 3825, 3857
AleI CACNNNNGTG 1 cut(s) 1150
AloI GAACNNNNNNTCC 2 cut(s) 3604, 3636
Alw44I GTGCAC 3 cut(s) 3170, 5417, 8170
AlwNI CAGNNNCTG 6 cut(s) 221, 1463, 8833, 9464, 10575, 11876
Ama87I CYCGRG 4 cut(s) 3485, 3979, 4883, 9227
Aor13HI TCCGGA 6 cut(s) 979, 3158, 3427, 4465, 5665, 5713
ApaLI GTGCAC 3 cut(s) 3170, 5417, 8170
ArsI GACNNNNNNTTYG 4 cut(s) 273, 305, 11619, 11651
AseI ATTAAT 1 cut(s) 10038
AsiGI ACCGGT 1 cut(s) 951
Asp700I GAANNNNTTC 5 cut(s) 372, 3132, 5100, 7019, 11772
Asp718I GGTACC 1 cut(s) 3778
AspA2I CCTAGG 1 cut(s) 6221
AsuC2I CCSGG 3 cut(s) 2245, 6709, 10084
AsuII TTCGAA 2 cut(s) 5777, 6844
AsuNHI GCTAGC 1 cut(s) 7435
AvaI CYCGRG 4 cut(s) 3485, 3979, 4883, 9227
AvaII GGWCC 9 cut(s) 259, 1327, 2935, 3286, 4348, 4775, 6218, 6705, 10508
AvrII CCTAGG 1 cut(s) 6221
AxyI CCTNAGG 4 cut(s) 828, 1476, 7455, 10752
BaeGI GKGCMC 5 cut(s) 570, 3174, 5421, 8174, 11845
BaeI ACNNNNGTAYC 4 cut(s) 3762, 3795, 11103, 11136
BalI TGGCCA 2 cut(s) 596, 11370
BamHI GGATCC 1 cut(s) 9343
BanI GGYRCC 2 cut(s) 567, 3778
BanII GRGCYC 7 cut(s) 686, 2047, 3617, 3986, 7530, 10814, 11551
BarI GAAGNNNNNNTAC 2 cut(s) 4485, 4517
BauI CACGAG 2 cut(s) 7177, 7755
BceAI ACGGC 4 cut(s) 7625, 7667, 7821, 11130
BclI TGATCA 8 cut(s) 2422, 2581, 6526, 6727, 8932, 10192, 11328, 11982
BcnI CCSGG 3 cut(s) 2245, 6709, 10084
BcuI ACTAGT 2 cut(s) 6782, 9686
BfoI RGCGCY 3 cut(s) 657, 1252, 7106
BfrI CTTAAG 1 cut(s) 350
BfuAI ACCTGC 4 cut(s) 3112, 6937, 10815, 11842
BglI GCCNNNNNGGC 3 cut(s) 1841, 9067, 9735
BglII AGATCT 4 cut(s) 2620, 2851, 7181, 8780
BlnI CCTAGG 1 cut(s) 6221
BlpI GCTNAGC 2 cut(s) 1407, 5726
BmcAI AGTACT 4 cut(s) 75, 1744, 7473, 11323
Bme18I GGWCC 9 cut(s) 259, 1327, 2935, 3286, 4348, 4775, 6218, 6705, 10508
BmeRI GACNNNNNGTC 1 cut(s) 9382
BmeT110I CYCGRG 4 cut(s) 3485, 3979, 4883, 9227
BmgBI CACGTC 3 cut(s) 1148, 6878, 11009
BmrI ACTGGG 5 cut(s) 5465, 5988, 6944, 9060, 11193
BmtI GCTAGC 1 cut(s) 7439
BmuI ACTGGG 5 cut(s) 5465, 5988, 6944, 9060, 11193
BoxI GACNNNNGTC 2 cut(s) 4422, 5763
BplI GAGNNNNNCTC 4 cut(s) 748, 780, 7853, 7885
Bpu10I CCTNAGC 2 cut(s) 5808, 8007
Bpu1102I GCTNAGC 2 cut(s) 1407, 5726
Bpu14I TTCGAA 2 cut(s) 5777, 6844
BpuMI CCSGG 3 cut(s) 2245, 6709, 10084
Bsa29I ATCGAT 4 cut(s) 303, 1204, 2468, 12261
BsaAI YACGTR 7 cut(s) 1244, 4490, 4571, 4841, 4892, 5432, 11915
BsaBI GATNNNNATC 4 cut(s) 1674, 8809, 9516, 11033
BsaHI GRCGYC 2 cut(s) 6290, 9891
BsaI GGTCTC 2 cut(s) 6205, 9286
BsaWI WCCGGW 8 cut(s) 951, 979, 3158, 3427, 4465, 5665, 5713, 10910
Bse118I RCCGGY 2 cut(s) 951, 10802
Bse21I CCTNAGG 4 cut(s) 828, 1476, 7455, 10752
Bse3DI GCAATG 7 cut(s) 57, 532, 815, 5737, 6445, 8631, 11416
Bse8I GATNNNNATC 4 cut(s) 1674, 8809, 9516, 11033
BseAI TCCGGA 6 cut(s) 979, 3158, 3427, 4465, 5665, 5713
BseCI ATCGAT 4 cut(s) 303, 1204, 2468, 12261
BseJI GATNNNNATC 4 cut(s) 1674, 8809, 9516, 11033
BseMI GCAATG 7 cut(s) 57, 532, 815, 5737, 6445, 8631, 11416
BsePI GCGCGC 1 cut(s) 11421
BseSI GKGCMC 5 cut(s) 570, 3174, 5421, 8174, 11845
BseX3I CGGCCG 1 cut(s) 7834
BseYI CCCAGC 2 cut(s) 445, 11673
BsgI GTGCAG 7 cut(s) 1767, 2176, 3584, 3965, 6915, 8106, 9450
Bsh1236I CGCG 2 cut(s) 11423, 12154
Bsh1285I CGRYCG 3 cut(s) 307, 5070, 7837
BshNI GGYRCC 2 cut(s) 567, 3778
BshTI ACCGGT 1 cut(s) 951
BshVI ATCGAT 4 cut(s) 303, 1204, 2468, 12261
BsiEI CGRYCG 3 cut(s) 307, 5070, 7837
BsiHKCI CYCGRG 4 cut(s) 3485, 3979, 4883, 9227
BsmBI CGTCTC 2 cut(s) 3068, 9759
Bso31I GGTCTC 2 cut(s) 6205, 9286
BsoBI CYCGRG 4 cut(s) 3485, 3979, 4883, 9227
Bsp119I TTCGAA 2 cut(s) 5777, 6844
Bsp13I TCCGGA 6 cut(s) 979, 3158, 3427, 4465, 5665, 5713
Bsp1407I TGTACA 4 cut(s) 529, 6982, 7990, 10764
Bsp1720I GCTNAGC 2 cut(s) 1407, 5726
Bsp19I CCATGG 5 cut(s) 2202, 8798, 9319, 11184, 12105
BspDI ATCGAT 4 cut(s) 303, 1204, 2468, 12261
BspEI TCCGGA 6 cut(s) 979, 3158, 3427, 4465, 5665, 5713
BspFNI CGCG 2 cut(s) 11423, 12154
BspHI TCATGA 5 cut(s) 772, 1051, 3508, 11062, 11296
BspMAI CTGCAG 3 cut(s) 1281, 6123, 6604
BspMI ACCTGC 4 cut(s) 3112, 6937, 10815, 11842
BspOI GCTAGC 1 cut(s) 7439
BspQI GCTCTTC 2 cut(s) 691, 4884
BspT104I TTCGAA 2 cut(s) 5777, 6844
BspT107I GGYRCC 2 cut(s) 567, 3778
BspTI CTTAAG 1 cut(s) 350
BspTNI GGTCTC 2 cut(s) 6205, 9286
BsrBI CCGCTC 4 cut(s) 7724, 8584, 11685, 11798
BsrDI GCAATG 7 cut(s) 57, 532, 815, 5737, 6445, 8631, 11416
BsrFI RCCGGY 2 cut(s) 951, 10802
BsrGI TGTACA 4 cut(s) 529, 6982, 7990, 10764
BssAI RCCGGY 2 cut(s) 951, 10802
BssHII GCGCGC 1 cut(s) 11421
BssNAI GTATAC 3 cut(s) 2721, 5472, 8388
BssNI GRCGYC 2 cut(s) 6290, 9891
BssSI CACGAG 2 cut(s) 7177, 7755
Bst1107I GTATAC 3 cut(s) 2721, 5472, 8388
Bst2BI CACGAG 2 cut(s) 7177, 7755
BstACI GRCGYC 2 cut(s) 6290, 9891
BstAFI CTTAAG 1 cut(s) 350
BstAPI GCANNNNNTGC 2 cut(s) 6584, 12059
BstAUI TGTACA 4 cut(s) 529, 6982, 7990, 10764
BstBAI YACGTR 7 cut(s) 1244, 4490, 4571, 4841, 4892, 5432, 11915
BstBI TTCGAA 2 cut(s) 5777, 6844
BstDSI CCRYGG 7 cut(s) 2202, 4759, 8210, 8798, 9319, 11184, 12105
BstEII GGTNACC 1 cut(s) 12100
BstENI CCTNNNNNAGG 5 cut(s) 459, 5117, 7696, 11601, 11891
BstFNI CGCG 2 cut(s) 11423, 12154
BstH2I RGCGCY 3 cut(s) 657, 1252, 7106
BstMCI CGRYCG 3 cut(s) 307, 5070, 7837
BstPAI GACNNNNGTC 2 cut(s) 4422, 5763
BstPI GGTNACC 1 cut(s) 12100
BstSLI GKGCMC 5 cut(s) 570, 3174, 5421, 8174, 11845
BstSNI TACGTA 2 cut(s) 1244, 4892
BstUI CGCG 2 cut(s) 11423, 12154
BstXI CCANNNNNNTGG 4 cut(s) 1152, 3775, 6134, 12028
BstZ17I GTATAC 3 cut(s) 2721, 5472, 8388
BstZI CGGCCG 1 cut(s) 7834
Bsu15I ATCGAT 4 cut(s) 303, 1204, 2468, 12261
Bsu36I CCTNAGG 4 cut(s) 828, 1476, 7455, 10752
BsuTUI ATCGAT 4 cut(s) 303, 1204, 2468, 12261
BtgI CCRYGG 7 cut(s) 2202, 4759, 8210, 8798, 9319, 11184, 12105
BtgZI GCGATG 6 cut(s) 3129, 3558, 3950, 7692, 8875, 11204
BtrI CACGTC 3 cut(s) 1148, 6878, 11009
BtsI GCAGTG 5 cut(s) 3735, 4479, 6480, 8573, 8901
BveI ACCTGC 4 cut(s) 3112, 6937, 10815, 11842
CaiI CAGNNNCTG 6 cut(s) 221, 1463, 8833, 9464, 10575, 11876
CciI TCATGA 5 cut(s) 772, 1051, 3508, 11062, 11296
Cfr10I RCCGGY 2 cut(s) 951, 10802
ClaI ATCGAT 4 cut(s) 303, 1204, 2468, 12261
CseI GACGC 5 cut(s) 4781, 7158, 9078, 9899, 10129
CsiI ACCWGGT 2 cut(s) 3418, 5964
CspAI ACCGGT 1 cut(s) 951
CspCI CAANNNNNGTGG 4 cut(s) 8131, 8166, 10069, 10104
DraI TTTAAA 7 cut(s) 733, 4018, 5529, 9156, 10539, 11908, 12297
DraIII CACNNNGTG 2 cut(s) 9198, 10499
DrdI GACNNNNNNGTC 6 cut(s) 4595, 6703, 7278, 7418, 9177, 11436
DriI GACNNNNNGTC 1 cut(s) 9382
DseDI GACNNNNNNGTC 6 cut(s) 4595, 6703, 7278, 7418, 9177, 11436
EaeI YGGCCR 6 cut(s) 594, 7725, 7834, 8843, 9727, 11368
EagI CGGCCG 1 cut(s) 7834
Eam1105I GACNNNNNGTC 1 cut(s) 9382
EciI GGCGGA 4 cut(s) 203, 1468, 1512, 5012
Ecl136II GAGCTC 3 cut(s) 3615, 3984, 11549
EclXI CGGCCG 1 cut(s) 7834
Eco105I TACGTA 2 cut(s) 1244, 4892
Eco147I AGGCCT 4 cut(s) 1120, 6868, 11562, 12239
Eco24I GRGCYC 7 cut(s) 686, 2047, 3617, 3986, 7530, 10814, 11551
Eco31I GGTCTC 2 cut(s) 6205, 9286
Eco32I GATATC 5 cut(s) 1902, 4867, 5020, 6013, 8715
Eco47I GGWCC 9 cut(s) 259, 1327, 2935, 3286, 4348, 4775, 6218, 6705, 10508
Eco52I CGGCCG 1 cut(s) 7834
Eco53kI GAGCTC 3 cut(s) 3615, 3984, 11549
Eco81I CCTNAGG 4 cut(s) 828, 1476, 7455, 10752
Eco88I CYCGRG 4 cut(s) 3485, 3979, 4883, 9227
Eco91I GGTNACC 1 cut(s) 12100
EcoICRI GAGCTC 3 cut(s) 3615, 3984, 11549
EcoNI CCTNNNNNAGG 5 cut(s) 459, 5117, 7696, 11601, 11891
EcoO109I RGGNCCY 4 cut(s) 259, 1327, 2863, 6705
EcoO65I GGTNACC 1 cut(s) 12100
EcoRI GAATTC 3 cut(s) 466, 739, 2124
EcoRV GATATC 5 cut(s) 1902, 4867, 5020, 6013, 8715
EcoT22I ATGCAT 3 cut(s) 2768, 8878, 12221
EcoT38I GRGCYC 7 cut(s) 686, 2047, 3617, 3986, 7530, 10814, 11551
Esp3I CGTCTC 2 cut(s) 3068, 9759
FauI CCCGC 5 cut(s) 574, 2806, 5226, 7515, 10217
FauNDI CATATG 4 cut(s) 6340, 7570, 8788, 11433
FbaI TGATCA 8 cut(s) 2422, 2581, 6526, 6727, 8932, 10192, 11328, 11982
FblI GTMKAC 9 cut(s) 2720, 4795, 5434, 5471, 8387, 10405, 10983, 11092, 11485
FriOI GRGCYC 7 cut(s) 686, 2047, 3617, 3986, 7530, 10814, 11551
FspAI RTGCGCAY 1 cut(s) 5736
FspI TGCGCA 1 cut(s) 5736
GsaI CCCAGC 2 cut(s) 449, 11677
HaeII RGCGCY 3 cut(s) 657, 1252, 7106
HgaI GACGC 5 cut(s) 4781, 7158, 9078, 9899, 10129
Hin1I GRCGYC 2 cut(s) 6290, 9891
HindIII AAGCTT 7 cut(s) 209, 371, 386, 2952, 5125, 5882, 8099
HpaI GTTAAC 3 cut(s) 1024, 2196, 7147
Hpy99I CGWCG 5 cut(s) 2043, 4136, 4139, 8285, 11116
Hsp92I GRCGYC 2 cut(s) 6290, 9891
KflI GGGWCCC 1 cut(s) 6705
Kpn2I TCCGGA 6 cut(s) 979, 3158, 3427, 4465, 5665, 5713
KpnI GGTACC 1 cut(s) 3782
Ksp22I TGATCA 8 cut(s) 2422, 2581, 6526, 6727, 8932, 10192, 11328, 11982
KspAI GTTAAC 3 cut(s) 1024, 2196, 7147
LguI GCTCTTC 2 cut(s) 691, 4884
MabI ACCWGGT 2 cut(s) 3418, 5964
MbiI CCGCTC 4 cut(s) 7724, 8584, 11685, 11798
MfeI CAATTG 9 cut(s) 1641, 1863, 2528, 4551, 7485, 8148, 10196, 10587, 10865
MlsI TGGCCA 2 cut(s) 596, 11370
MluNI TGGCCA 2 cut(s) 596, 11370
Mox20I TGGCCA 2 cut(s) 596, 11370
Mph1103I ATGCAT 3 cut(s) 2768, 8878, 12221
MroI TCCGGA 6 cut(s) 979, 3158, 3427, 4465, 5665, 5713
MroXI GAANNNNTTC 5 cut(s) 372, 3132, 5100, 7019, 11772
MscI TGGCCA 2 cut(s) 596, 11370
Msp20I TGGCCA 2 cut(s) 596, 11370
MspA1I CMGCKG 7 cut(s) 608, 1261, 1406, 4429, 7748, 9725, 11750
MspCI CTTAAG 1 cut(s) 350
MunI CAATTG 9 cut(s) 1641, 1863, 2528, 4551, 7485, 8148, 10196, 10587, 10865
MvnI CGCG 2 cut(s) 11423, 12154
NciI CCSGG 3 cut(s) 2245, 6709, 10084
NcoI CCATGG 5 cut(s) 2202, 8798, 9319, 11184, 12105
NdeI CATATG 4 cut(s) 6340, 7570, 8788, 11433
NheI GCTAGC 1 cut(s) 7435
NmeAIII GCCGAG 6 cut(s) 5037, 7812, 8395, 8929, 9890, 11235
NsbI TGCGCA 1 cut(s) 5736
NsiI ATGCAT 3 cut(s) 2768, 8878, 12221
NspV TTCGAA 2 cut(s) 5777, 6844
OliI CACNNNNGTG 1 cut(s) 1150
PaeI GCATGC 2 cut(s) 4673, 9706
PaeR7I CTCGAG 3 cut(s) 3485, 4883, 9227
PagI TCATGA 5 cut(s) 772, 1051, 3508, 11062, 11296
PaqCI CACCTGC 1 cut(s) 6937
PasI CCCWGGG 1 cut(s) 792
PauI GCGCGC 1 cut(s) 11421
PceI AGGCCT 4 cut(s) 1120, 6868, 11562, 12239
PciI ACATGT 3 cut(s) 3323, 3475, 10767
PciSI GCTCTTC 2 cut(s) 691, 4884
PcsI WCGNNNNNNNCGW 1 cut(s) 8471
PdmI GAANNNNTTC 5 cut(s) 372, 3132, 5100, 7019, 11772
PflFI GACNNNGTC 1 cut(s) 4808
PflMI CCANNNNNTGG 4 cut(s) 2486, 6881, 7547, 9785
PfoI TCCNGGA 3 cut(s) 6707, 7691, 9826
PinAI ACCGGT 1 cut(s) 951
Ple19I CGATCG 1 cut(s) 307
Ppu21I YACGTR 7 cut(s) 1244, 4490, 4571, 4841, 4892, 5432, 11915
PpuMI RGGWCCY 3 cut(s) 259, 1327, 6705
PscI ACATGT 3 cut(s) 3323, 3475, 10767
PshAI GACNNNNGTC 2 cut(s) 4422, 5763
PshBI ATTAAT 1 cut(s) 10038
PsiI TTATAA 1 cut(s) 3633
Psp124BI GAGCTC 3 cut(s) 3617, 3986, 11551
Psp1406I AACGTT 1 cut(s) 2755
Psp5II RGGWCCY 3 cut(s) 259, 1327, 6705
PspEI GGTNACC 1 cut(s) 12100
PspFI CCCAGC 2 cut(s) 445, 11673
PspPPI RGGWCCY 3 cut(s) 259, 1327, 6705
PspXI VCTCGAGB 1 cut(s) 3485
PsrI GAACNNNNNNTAC 2 cut(s) 2775, 2807
PstI CTGCAG 3 cut(s) 1281, 6123, 6604
PstNI CAGNNNCTG 6 cut(s) 221, 1463, 8833, 9464, 10575, 11876
PsyI GACNNNGTC 1 cut(s) 4808
PteI GCGCGC 1 cut(s) 11421
PvuI CGATCG 1 cut(s) 307
PvuII CAGCTG 7 cut(s) 608, 1261, 1406, 4429, 7748, 9725, 11750
SacI GAGCTC 3 cut(s) 3617, 3986, 11551
SalI GTCGAC 1 cut(s) 11484
SapI GCTCTTC 2 cut(s) 691, 4884
ScaI AGTACT 4 cut(s) 75, 1744, 7473, 11323
SexAI ACCWGGT 2 cut(s) 3418, 5964
Sfr274I CTCGAG 3 cut(s) 3485, 4883, 9227
SfuI TTCGAA 2 cut(s) 5777, 6844
SinI GGWCC 9 cut(s) 259, 1327, 2935, 3286, 4348, 4775, 6218, 6705, 10508
SlaI CTCGAG 3 cut(s) 3485, 4883, 9227
SnaBI TACGTA 2 cut(s) 1244, 4892
SpeI ACTAGT 2 cut(s) 6782, 9686
SphI GCATGC 2 cut(s) 4673, 9706
SseBI AGGCCT 4 cut(s) 1120, 6868, 11562, 12239
SspI AATATT 6 cut(s) 820, 2485, 2806, 6894, 7554, 10558
SstI GAGCTC 3 cut(s) 3617, 3986, 11551
StuI AGGCCT 4 cut(s) 1120, 6868, 11562, 12239
TaqII GACCGA 5 cut(s) 357, 887, 2202, 3274, 5056
TauI GCSGC 5 cut(s) 1658, 6250, 7727, 10376, 12157
TspGWI ACGGA 8 cut(s) 4748, 5496, 8227, 8529, 9741, 10723, 10967, 12194
Tth111I GACNNNGTC 1 cut(s) 4808
Van91I CCANNNNNTGG 4 cut(s) 2486, 6881, 7547, 9785
Vha464I CTTAAG 1 cut(s) 350
VneI GTGCAC 3 cut(s) 3170, 5417, 8170
VpaK11BI GGWCC 9 cut(s) 259, 1327, 2935, 3286, 4348, 4775, 6218, 6705, 10508
VspI ATTAAT 1 cut(s) 10038
XagI CCTNNNNNAGG 5 cut(s) 459, 5117, 7696, 11601, 11891
XbaI TCTAGA 5 cut(s) 376, 2362, 7375, 7964, 8777
XcmI CCANNNNNNNNNTGG 5 cut(s) 1152, 1837, 3632, 9047, 9126
XhoI CTCGAG 3 cut(s) 3485, 4883, 9227
XmaJI CCTAGG 1 cut(s) 6221
XmiI GTMKAC 9 cut(s) 2720, 4795, 5434, 5471, 8387, 10405, 10983, 11092, 11485
XmnI GAANNNNTTC 5 cut(s) 372, 3132, 5100, 7019, 11772
ZraI GACGTC 1 cut(s) 6291
ZrmI AGTACT 4 cut(s) 75, 1744, 7473, 11323
Zsp2I ATGCAT 3 cut(s) 2768, 8878, 12221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.