RLG00000007293

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0002758
Physical Location & Seq
Forward (+)
15433664 .. 15469975
36312 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007293

Sequence Viewer

Length: 12459 bp
ATGTTCGAAGCACACGTCCTCCATTTGCTTAGAAGATATTTGGGGGAATATGTCGAAGGACTCTCTGTCGAAGCTTTAAGAATAAGTGTTTGGCAAGGTGATGTTGTTCTCAAAGATTTGAAATTAAAGGCAGAGGCCCTAAATTCACTAAAACTTCCAGTCACTGTAAAAGCTGGTTTTATTGGTTCCATTACATTAAAGGTTCCATGGAAAAGTTTGGGCAAAGAACCTGTGATTGTTCTCATTGACCGTGTATTCATTCTTGCTCATCCTGTTACTGATGACAGGACTCTCAAGGAGGACAGAGACAAACTATTTGAAGCTAAACTTCAAGAGATTGAGGAAGCAGAGTCGGCAACTCTTGAAGCAATATCAAAGTCAAAGATAGGAAGTCAATCTAATGGAAATTCATGGCTAGGTTCCCTTATTGCTACTATTATTGGGAATCTAAAGATATCAATTAGCAATGTACATATAAGATATGAGGATTCGGTCAGTAATCCAGGACATCCTTTTTGTTCGGGTGCCACTTTAGCCAAACTTGCTGCTGTAACAATGGATGAGGAAGGGAATGAAACATTTGATACCAGTGGTGCTCTTGATAAGTTGCGAAAGTCATTGCAACTAGAGAGACTAGCAATGTATCATGATTCTGATAGTGCACCGTGGAAGATAGATAAGGGATGGGAGGATCTTACTCCAAAGGAATGGGTTGAGATTTTTGAAGATGGAATACGTGAACCTGTGGATGACCATGCAATGGTGTCTAAGTGGGCTATGAATCACAAGTATTTGGTCTCACCTATAAATGGAGTTCTAAAGTATCACCGTGTAGGAAACCAAGAAAGAAATGATCCAGAGGTTCCGTTTGAGAACGCTTCCCTTGCCCTAAGTGACGTTTCCTTGACAATGACAGAGGCTCAATATTGTGATTGGATAAAACTATTGGAAGTTGTTTCAAGATACAAGAGATATGTTGAATTTTTCCATCTAAGACCAGCACTACCAGTCTCAGGGGCTCCATATTTGTGGTGGCGTTATGCTGCTCAAGCAGGACTTCAGCAGAAGAAAATGTGTTACCGGTTCTCTTGGGACCGCATTCGGCTTCTTTGCCAGCTTCGTCGTCGTTACATTCAGTTATATGTTGGTTTCTTACAACACCTGACAAATGTTGATAATGCTGAAATTAGAGAAATTGAGAAAGATTTAGATCCTAAAGTAATTCTTCTGTGGAGGTTACTTGCACATGCAAAGGTGGAATCTGTAAAATCGAAGGAAGCGGCTGAACAGAGGATGCTCCAGAAGAAAAGCTGGTTTTCATTTAGATGGCGTACACCTGATGAATCTGCTGATGATACTTCTGAGGGATCACAGTCACCAGAAGAAAGACTGACTAAAGAGGAGTGGCAAGCAATTAATAAGTTACTGAGTTACCAGCCAGATGAAACATTGGCATCTCACTCAGGAAAGGACATGCCGAATATGATCCGGTTTATGGTAACTGTGTCTGTTGATCGGGCTGCTGCTAGGATCATTGATATAAATCACACTGAGATTTTGTGTTGTAAATTTGAGCTACTTCAAGTGTCAACAAAGTTTAAACATAAAAGTACATACTGTGATGTGTCATTGAGATTCTATGGTCTGTATGCACCGGAAGGCTCGCTTGCTCAGAGCGTATCTAGTGAGCAGAAGGCGAATGCACTGGCTGCTAGCTTTGTATACTCTCCAGTTGGAGAGAATGTTGATTGGAGGCTTTCAGCTACCATTTCACCTTGTCATGTCACGGTTTTGATGGAAAGCTGTGATCGCTTTTTGGATTTTGTGAAAAGGAGTAATGCAGTTAGTCCTACTGTTACATTGGAAACGGCAACTGCTTTGCAGATGCAAATTGAGAAAGTGACTCGTAGAGCACAAGAGCAATTTCAAATGGTATTAGAAGAACAAAGCAGATTTGCCCTTGATATTGATTTGGATGCTCCAAAAGTAAGAGTTCCTATCAGAACCAAGGGCTCTTCCAAATGTGATAGCCATTTTCTATTGGATCTTGGTCATTTCACCCTGCAAACGAAGGATACTCAGCATGATGAACAGAAGAACATGTATTCTCGTTTTTTTATAACGGGAAGAGATATTGCTGCATTTTTTACGGAATGTGGTTCTGATTGCCAAATTCGCACTTTGGAATCACCTGACTCTGATAACCACCCACCGGTTACCCCGGAAAATGTTGACAATTTCTATCCTCTCATAGATAGGTGTGGAATGGCTCTTCTTGTTGATCAGATCAGAGTACCTCACCCAAGTTACCCATCAATGCGTATTTCAATTCAAGTGCCAAATCTTGGGGTGCACTTTTCACCATCGAGATTTCAGAGACTCATGAAATTATTGAACATATTTTATGGAACTCTGGAAACTGTTGGTCAGCCGGCTGTTGATAATTTTCAAGCAGAACGTGCCCCATGGAGTCCTGCTGATCTTTACACAGATGCTAGAATTTTAGTATGGAAGGGGATTGGCAATTCTGTAGCTACATGGCAACCTTGTTTTCTTGTGTTGTCGGGGACAAATATTTTTGTTTTGGAGTCTGAGAAGTCGCAGACGTATCAGCGATACTCCAGCATGGCTGGTAGACAAGTATGTGAGGTTCCTCCTACAAGTATTGGTGGTTCACCATTTGGCCTTGCTGTGATTCACAGGGGGATGGACACTCAAAAGGCACTGGAGTCTTCTAGTAGCTTGATTATTGAGTTCCGTGGGGAGGAGGAAAAGGTCGTTTGGTTGAAAAGACTCATACAAGCAACATATCAAGCTTCTGCTCCCCCTTCAGTTGATGTCTTGGGAGAAACAATTGATCGTGTTGCTGAGTTTGGTGAGCCTCAGACCGGCAATTCTAAAACAGCTGACCTTGTCATTAATGGGGCATTGGTGGAGACAAAGTTATCTATTTATGGAAAGACGGGTGATAACGATGCTGAAGAACTTGATGAGACTCTGATGCTTGAGGTTCTTGCCAGTGGGGGGCAGGTTCATATGATTCTTTGGGAAGGTGACATGACACTTAAGACAAAGCTTCACTCTTTAAAAATCAAAGATGAGCTTCAAGGTCGTCTCTCTACAACCCCACAGTATTTAGCTTGTTCTGTGCTGAAGAGTGACAATTTAGTTTCACCCCCCGGCATAATTGATCCACATTGGAAAGAAATGTCTGTTTTGCTTCATGAGGAGGATGATACTTTTACGGATGCTTTGCCAGATTTTATGTCTGTATCAGATGCAGGCTTTGGTTCACCAACTTCAGATACGGTTTCATGTGTAACAACTGAGGACATCAATGATGCTGCTGGATTTGCATCTGCTGAAGGCTTAGTCCTTGAAAAGAATCTTGTTAAGGCAAGGTGCATTTCTGCTGAGGAATTTTATGAGGCGGAGGGTAGTGACTATTCCAATTTTGTATCTCTCACCTTCTCGACTCTGAGTTCTAGTTCACCTCATTATGATGGTATTGACACACAGATGAGCATCCGTATGTCAAAACTGGAGTTCTTCTGCAACAGACCTACTTTGATTGCTTTAATTGATTTTGGCCTGGACTTAAGCTCTGTCTACAGTGAGGAAAGTACTGCAGACATTACTGAAGGTTCAGGTGACAAATCTTTGACGAACAAAGAAAAGACTGAAGAAATTGGGCGTGTCAAAGGCTTGCTGGGTTATGGTAAAGGTCGTGTAGTATTTTATTTGAACATGAACGTGGACAGTGTGACTGTGTTTCTCAACAAGGAGGATGCTTCTCTGCTTGCGACATTTGTGCAAGAAAGTTTTGTGCTAGATCTGAAGGTCCACCCAAGTTCTCTTTCCATTGAGGGCACCCTAGGAAATTTTAGACTCCGTGATATGTCTCTTGGAGAAGATAACTGTTGGGCTTGGCTATGTGATATACGCAATCCAGACGTGGAATCCCTTATCAAGTTCAACTTTAAGTCTTACAGTGCTGAAGACGATGATTATGAAGGATATGATTATAGTTTGTGTGGTCGATTTGCTGCTGTTCGTATTGTCTTCCTTTACAGGTTTGTTCAGGAGATAACCGCATACTTTATGGAACTTGCTACCCCACATACTGAAGATGCAATCAAACTTGTTGATAAGGTTGGGGGTTTTGAGTGGCTAATTCAGAAGTATGAGATTGATGGAGCTGCCGCACTTAAGCTGGATCTGTCACTCGATACTCCAATAATCATTGTTCCCAGGAATTCAACTAGCAATGATTTCATTCAACTTGATCTGGGCCAGCTACAAGTCACAAATGAATTTAGTTGGCATGGTTCTCCAGAGAAAGATCCTTCTGCAGTCCACATTGATGTACTTCATGCTGAGATTCTGGGGATCAACATGTCTGTAGGAATCGACGGTCGCATGGGTAAATCAATGATACGAGAAGGCAAAGGATTTGATGTTTGTGTCCGGAGAAGTTTGAGGGATATCTTCAAAAAAGTCCCAACATTTTCTCTTGAAGTGAAGGTGGGCTTATTGCATTGCGTCATGTCTGACAAAGAATACAAAGTCATTCTGGATTGTGCATACACGAACTTATGTGAAGAACCAAAGCTTCCCCTTAGTTTCCGTGGTGGAATATCTGATTCAAAGGATACAATTAGGCTGCTGGTTGATAAGGTCAACATGAATAGTCAAATCCTACTATCGCGGACTGTTTCAATAGTGGCGGTTGTGGTTGATCACGCACTGTTGGAGTTGTATAATGGTATTCATGTGGAGTCTCCTTTCGCTCAAATTGCTCTTGAAGGTCTCTGGGTGTCGTATCGGATGACTTCATTGTCTGAAACAGATCTGTACATAACAATTTCAAAATTTTCTGTTGTGGACATTCGCCCTGATACAAAACCTGAAATGCGCCTTATGCTTGGATCATCCACGGATGCTTTTAAACAAGTTTCCTCTGGAAGTTTGCCTTTTTTCTTAAATAGGGGGAGCTTTAGGAGAACTGACTCTGATGCTGGATTCCATGGGGACTTACCAATATCAACAATGTTCTTAATGGACTATAGATGGCGCACATCAACCCAATTGTTTGTGGTTAGGATTCAGCAACCTCGAGTTCTAGTTGTAGCCGATTTCCTTTTGGCTGTGGGCGAGTTTTTTGTTCCTGCATTGCGGACAATAACCGGTAGGGAGGAAGTGATGGATCCTCATAATGATCCTATTGGTAAAAACAGTAGCATAGTGTTCACAGAGCCTACATACAAACAGACAGAAGATGTGGTGCATTTGTCTCCAAGTAGACAGTTAGTAGCAGATTTTTTAAGCATCGATGAATATACATATGATGGTTGTGGAAAGACCATCCATTTGAGTGAGGAAATAGATGCCAAAGAACTCCATTCAACTAGACCTCGACCAATAATTATAATTGGACGTGGAAAAAGGTTGCGGTTTATGAATGTCAAAATTGAGAATGGGTCTCTTTTGAGGAAGTATACATACTTAAATAATGATAGCAGCTACTCAGTATCCTTTGAGGATGGTGTTGACATTACGTTGCTGGAAAGTTCCTCATCTGATGATGATAAGAAGAGTCTAGAATACTTCCATGAATCGCCAGACTCCTCAAATATTTCCTCAAATTCTGAAAGTGATCCTAATAAGATCCCAAGTTTCAGTTTTGAAACACAGGTTGTTTCTCCTGAGTTTACTTTTTATGATGGTTCAAAGTCGTCTCTGGATGATTCATATGGTGAAAAGCTTCTCCGTGCAAAGCTGGATTTTAGCTTCATGTATGCATCTAAAGAAAATGATACCTGGGTTCGAGCTCTGGTGAAGGATCTTACTGTTGAGGCTGGTTCTGGGCTTGTTGTGCTTGATCCAGTGGATATATCTGGGGGATACACTTCTGTTAAGGACAAAACAAATATGTCCTTGTTATCAACTGATATCCGGTTCCATCTATCACTAAGTGCTATATCTCTTATAAGTAATTTGCAAAGCCAGGCAACAGCTGCATTGCAATATGGAAATTCAGCACCCTTGGCTCCTTGTACCAACTTCGATCGAATTTGGGTATCCCCAAAAGAAAATGGGTCCTGTTTCAACCTTACGTTTTGGAGGCCTCGAGCACCTTCAAATTATGTTATTTTGGGAGATTGCGTGACATCAAAGCCAGTTCCTCCCTCACAGGCAGTAATGGCAGTGAGTAATACATATGGGCGTGTGTGTAAACCAACTGGTTTCAATCTCATAGGATTGTTCTCTGCAATTCAAGGATTTACGGGGGGCGACTCTGATATTAATACAGATTGTTCTCTTTGGATGCCTATAGCACCACCAGGATACACAGCATTGGGTTCTGTAGCAAATATTGGGAAGGAACCCCCACCCAACCACATTGTTTATTGCATTCGTTCCGATCTTGTAACATCAACAACCTATATAGAATGCTTGTTCTGCTCTGCATCAAATCCTCAATTTGCATCTGGATTTAGCATCTGGCGTGTAGAGAATGTGCTTGGATCATTTTGTGCCCATTCTTCTACTGAATGCCCTTCCCAAGACCGTTGTTGTAACCTTAATCATCTTCTTCTTTGGAACTCAAGTCGGCATCATTCTTCTGCTAAAGAACCTGCCTCAGATTTAGCTGTTGTTGAAAACCGTGAAAGTCAGGTAAGCAGAAACCAGAGTGCACATTCTTCTGGATGGGATATTGTCAGATCAAGTTCAAAGGCAACTAAATGTTATATGTCTACCCCTAACTTTGAGAGAATCTGGTGGGACAAGGGTAGTGACATTCGCCGACCAGTCTCAATATGGAGACCCATTCCTCGTCAAGGCTATGCCATCTTGGGTGATTGCATTACTGAAGGCTTAGAACCACCAGCTGTTGGCATAATATTTAGAGCTGATGATCCTGAAATATCTGCGAAACCCGTGCAATTTACTAAAGTTGCCCATGTGGTAGGGAAAGGTTTTGATGAAGCTTTCTTCTGGTACCCAATTGCTCCACCAGGTTATGCTTCTCTAGGATGCATAGTCTCCAGAATAGATGAACCCCCAGGTGTAAACTCATTTTGCTGCCCTAGGATGGATCTGGTTAACCAAGCTAATATTCTTGAGGTGCCCATTTCAAGATCTTCAGCTTCAAAGGGTTCTCAGTGCTGGAGCATCTGGAGAGTTGAAAATCAGGCATGCACTTTTCTTGCACGTGGTGATCTGAAAAAACCGTCTAGCAGATTGGCTTATGCTATTGGTGACTCCATGAAACCCAAGACTAAGGAAAACATAACCGCTGAGGTGAAGCTAAGATGCTTGTCTGTAACTGTTCTAGACAGCTTGTGTGGAATGATGACCCCACTATTTGACACAACAATCACCAATATCAAACTTGCAACACATGGTGGAGCAGAAGCCATGAATGCAGTACTAATTTCCTCTATTGCTGCATCAACCTTCAATACTCAGTTGGAAGCATGGGAGCCGCTTGTGGAACCTTTTGATGGAATATTCAAGTTTGAAACATATGATTCTAATGTACACTCACCATCAGAATTTGGGAAGACAATGCGTATTGCTGCCACAAGTATCGTTAATATAAATGTCAGCGCTGCAAATCTTGAAACTTTTGTAGGGACTATTCTGTCATGGAGAAGACAATTAGACCTTGAACAGAAAGCAAAGAAGATAAATGAGGAAGCTTGTGGTCTAAGCAGTAAAGGAGAGGACCAGACTTTGTCTGCACTGGATGATGACGACTTTCAGACTGTGACAGTAGAGAATAAACTTGGTTGCGATGTCTATCTGAAAAAAGTTGAACAAAATTCAGATATGGTGAACCAGTTGCATCATGGTGACTCTGTCTCTATATGGGTTCCACCTCCACAGTTTTCAGACAGGTTAAATGTTGCAGATGAATCCAAGGAAGCTCGTTATTATGTTGCTATACAAATTCATGAAGCTAAGGGTTTGCCTATTACAGATGATGGTAATAGCCATAACTTCTTATGTGCTTTGAGACTTGCTGTTGATAGCCAGGCAACAGATCAACAAAAACTTTTTCCTCAAAGTGCAAGGACGAAATGCGTTAAGCCTTCAGTGTCAAAAAATAGTAACCTGAATGAAGGCTCTGCAGAATGGAATGAACTTTTCATATTTGAAGTTCCTCGGAAGGGCCCAGCTAAACTGGAAGTGGAGGTGACAAACCTCGCAGCAAAAGCTGGAAAGGGTCAAGTAGTTGGTGCACTCTCATTTTCTGTCGGGCAAGATGCGAATATGTTGAGGAAGCTAGCCTCGGTGAAGGTTCTCCATCAAGGTCATGATATTCAGAATATAGTATCCTATCCGCTAAAGCGGACGGTTCAACATAACCAACTTGAAGACCCGGACGAATATGGTTGCCTGTTGGTTTCAACTTCTTATTTTGAGAGGAAAACAACTCCAAGTCTTCAAAGAGATTTGGAGAATGAGAATGTGGTTGATAGAGACATAGGTTTCTATATTGGTCTGGGCCCCAAAGGTGTTTGGCAGGGCATACGGGCGTTGCTTCCATTGTCAGTTTTTCCAAAATTGTTACAGGATGACTTTATTGCACTGGAAGTTATGCTGAAAAATGGCAGGAAACATGCTATTTTCAGGGGTCTTGCAACAGTTGTAAATGAGACTGATGTTACATTGAAACTTTCAGTATGTGGTGCTTCTTTGATTCAAGTTTATGATTCCTCATCTGGAACAAGTGGAAACATAAATCGCCCTAGGAATGATGTCTCTGCCATAAACCCTGGAGGTTCATTTGTTTTACCTTGGAAAAGTACATCAAGTGATTCTGACCAGTGCTTACAAATTTGCCCTTCTGTTGATCATCCTCAGCGTCCATATTCCTGGGGTTCTGTTGTTGCGGTGGGATCTGGTTATGCATCTGGAAAGGACTTGACGGTTATGGATCAGGTTTCACTTTCAGGACAGTATACTTCAAAGCAAGAAAATATGATGCCTAATGTTACTTTTCAGTTGAATCAGCTTGAGAAGAAAGATAAACTTCTGTGTTGTACTAGTAACGTAAATAAACAACTTTGGCTTAGTGTTGGGGCAGATGCCTCAGTTCTTCATACTGAACTCAATGCACCTGTTTATGATTGGAAAATCTCTGTCAATTCTCCTATGAAGTTGGAAAACAGACTTCCCTGTCCGGCTGAATTCACCATTTGGGAAAAGATAAAAGAAGGAAAGTGTATTGAGCGCCAGAATGGTGTGATCTCTTCACGTGGGGGTGTTCATATATATTCAGCAGACATTCAGAAACCGATATATCTCACCTTGTTTGTTCAGGGTGGCTGGGTCATGGAGAAGGGCCCCATTCTTGTTTTGAATCTATATTCTAATGATCATGTCTCATCATTCTGGATGGTTCACCAGAAAAGTAAAAGGAGACTGCGAGTGAGTATTGAACGTGACATGGGAGGGACCACTGTTGCACCCAAAATCATAAGGTTTTTTGTTCCTTATTGGATCATTAATGAGTCATCTATTTCTTTGGTGTATCGAGTGGTGGAAGTGGAGCCTTTGGACAATGCAGACCCAGATTCCCCAATTGTTTCTAGAGCAGTCAACTCTGCAAAGACAGCTTTAAAAAGTCCTACATACTCCATGGAAAGGAAGCATTCAGCTGCAAGGAGAAACATTCAAGTACTTGAAGTTATTGAGGATACTAGTCCTGTTCCTAACATGCTTTCTCCGCAAGACTACAAAAGCCGCAGTGGAGCTATGCTGTTTTCATCTCAAAAAGATGTGTATCCGTCCTCTCGAGTTGGCCTCTCTGTTGCGATTCGCCATTCGGAAATTTACAGTTCTGGAATATCTCTTCATGAGCTTGAAAAGAAGGAACGGCTTGATGTAAAAGCATTCAGTTCAGATGGATCTTATTACATGCTTTCAGCACGCTTGAACATGACCTCAGACAGAACAAAGGTTGTGCACTTCCAACCCCACACATTGTTCGTGAATAGAGTTGGTTACAGCCTCTGCTTGCAGCAGTGTGATTCTCAGGCAGTGACATGGATTCATCCCACTGATTCTCCAAAACCCTTCTGTTGGCAGTCTGGTTCCAAAGTTGAAAAGTTGAAGCTGCGGGTGGATGGTTACAAATGGAGTACACCATTTAGTGTTTGTAATGAAGGTATTATGCGTGTTTGCTTGAGGAAAGATACTGGAAACGATCAACTGCAGTTGCGAGTTGGAGTAAGAAGTGGAGCAAAGAACTCAAGCCTGGAAGTTATTTTCCGTCCAAACTCTTCCTTGAGTCCTTACAGGATTGAAAATCGTTCCATGTTTTTACCCATCCGTATTCGGCAAGTGGACGGTACCTTTGATTCATGGACTTTCCTTCTTCCTAATTCAGCAGCTTCCTTTTTATGGGAAGATCTTGGTAGAAGTCGACAATTAGAAATGCTGGTAGAGGGGGCAGACCCATTGAAATCAGAGATGTATGGTATTGATGAGATTTCTGATCATCAACCCATTAAAGTGGGAAGTGGATCCTCTAGAGCTCTGCGTGTTACCATAGTAAAAGAAGAGAAAGTTAATGTTGTCAAGATCAGTGACTGGATGCCAGAAAGTGAACCTACTGGAATCTTAAGTAGAAGGCATTCGTCATCCCTCTCTCAGCTTTCTAAACAGCAACAAGCAGCATCTTCCTCTGATTGTGAATTTCATATTATTGTTGAGTTAGCTGAACTTGGGATATCCATAATTGACCATACACCTGAAGAAATCCTGTACCTTTCGATTCAGAATGTTCTTTTTGCATATTCAACTGGCTTGGGCTCTGGAGTCAGTAGGTTAAAACTTAGAATGCGTGGGATACAATTGGACAACCAATTGCCATTAACCCCAATGCCAGTTCTCTTTAGGCCACATAGAGTTGGAGAGGAGATGGACTATATCTTGAAATTTTCTGTCACAATGCAATCCAATGGGTCACTGGATCTTTGTGTCTATCCGTATATTGGTCTCCACGGACCTGCAAATTCTGCCTTTTTGATAAACATTCATGAACCTATCATCTGGCGCCTTCATGAAATGATTCAGCAGGTCAACCTTAGTCGGTTGTATGATACTCAAACAACTGCCGTTTCTGTTGATCCAATCGTTGAAATTGGGGTTCTTAACATATCAGAGGTTCGATTCAAAATGTCAATGGCTATGTCACCTAGTCAGCGGCCAAGAGGTGTTCTTGGATTTTGGGCATCTTTAATGACTGCATTAGGGAACACTGAGAATATGGCAGTGAGGATCAATCAAAGGTTTCTTGAAAATGTGTGCATGAGGCAGAGTTCCATGATTAGTATTGCTATTTCAAACATTCAAAAGGATCTTTTAGGCCAGCCTCTACAACTGCTCTCAGGTGTCGATATACTAGGTAATGCAAGTAGTGCACTTGGACATATGAGCAGGGGTGTGGCTGCCTTATCATTTGATAAGAAGTTCATTCAAAGCCGACAAAGACAGGAAAGCAAGGGTGTAGAGGACTTTGGTGATGTTATTAGAGAAGGAGGTGGAGCACTGGCAAAAGGCTTCTTCAGAGGGGTCACTGGCATATTGACAAAGCCACTTGAAGGTGCTAAGTCTTCTGGTGTTGAGGGTTTTGTTCAAGGTGTTGGAAAAGGATTAATTGGTGCAGCTGCACAACCGGTGAGTGGGGTTCTGGATCTTCTGTCAAAAACTACTGAAGGTGCTAATGCAATGAGAATGAAGATAGCATCAGCTATAACTTCTGAAGATCAACTCCTCCATAGACGACTGCCGCGTGTAATTAGTGGGGATAATTTACTTAGACCATATGATGACTACAAAGCTCAAGGACAGGTTATATTGCAGCTGGCAGAATCAGGTTCATTTTTTCTCCAGGTTGATCTATTTAAAGTACGTGGAAAGTTTGCGTTATCAGATGCTTATGAAGATCACTTTTTAATCCGCAAAGGAAAAGTTCTTGTGGTCACTCATCGAAGAGTGATACTGCTGCAACAACCCAATACTATTTCTCAGAAGAAGTTCAACCCAGCTAGGGATCCCTGTTCGGTATTGTGGGATGTACTTTGGGATGACCTGGTGACAATGGAACTGGCATTTGGAAAAAAAGACCACCCAAAAGCTCCACATTCGCGGCTCATTCTTTATTTACGTGATAGATCAACAGAGATGAGGGAGCAAGCTCGTGTAATAAAGTGCATCCATGACACCCCCCAGGCTTTTGAAGTGTACACCTCAATTGAACGAGCAATGAGCATTTATGGACCAAACAAAACAAAGGAAAGGCCAACAAAAAATGTGACAAAGCCATATTCACCGCTTGCTGATAGCACCGGTGCTGAAGTTAACCCAAAAGAAGGGCTTAGCTCCTTGTCACCCCGACCGATGCCACTTCCTCGTTCAATGTTTGGCAGGAGTGCCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Chorein_N Pex24p SHR-BD VPS13 VPS13_C VPS13_mid_rpt Vps62

Protein Analysis

4153

Amino Acids

462.86

Weight (kDa)

5.9

Isoelectric Point (pI)

41.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 1 - 701 7e-100 VPS13-like family N-terminal region
ATG2_CAD PF13329 8 - 192 1.4e-08 Autophagy-related protein 2
VPS13_M PF25033 1402 - 1539 9.8e-07 VPS13-like family middle region
Vps62 PF06101 2000 - 2171 3.1e-10 Vacuolar protein sorting-associated protein 62
Vps62 PF06101 2258 - 2396 4.5e-08 Vacuolar protein sorting-associated protein 62
VPS13_VAB PF25036 3010 - 3445 9.9e-23 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3934 - 4041 2.7e-12 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 2120, 5429, 5990
AasI GACNNNNNNGTC 3 cut(s) 4837, 7648, 9189
Acc36I ACCTGC 4 cut(s) 3019, 6646, 11032, 11083
Acc65I GGTACC 2 cut(s) 7002, 10364
AccB1I GGYRCC 6 cut(s) 524, 3869, 7002, 7129, 10364, 11070
AccB7I CCANNNNNTGG 3 cut(s) 760, 2345, 6896
AccI GTMKAC 8 cut(s) 1722, 2635, 3609, 5302, 5498, 6758, 8972, 10438
AccII CGCG 3 cut(s) 4708, 11809, 12166
AccIII TCCGGA 1 cut(s) 4467
AcoI YGGCCR 1 cut(s) 11222
AcvI CACGTG 2 cut(s) 7217, 9269
AcyI GRCGYC 1 cut(s) 11071
AdeI CACNNNGTG 3 cut(s) 5975, 7220, 7409
AfeI AGCGCT 1 cut(s) 7615
AflII CTTAAG 4 cut(s) 3065, 3598, 4208, 10636
AflIII ACRYGT 3 cut(s) 13, 2100, 4395
AgeI ACCGGT 5 cut(s) 1080, 2212, 5186, 11692, 12365
AhdI GACNNNNNGTC 1 cut(s) 65
AhlI ACTAGT 2 cut(s) 9056, 9713
AjiI CACGTC 3 cut(s) 16, 3955, 5438
AjuI GAANNNNNNNTTGG 8 cut(s) 73, 105, 3841, 3873, 7104, 7136, 12114, 12146
Alw44I GTGCAC 6 cut(s) 660, 2351, 6696, 8247, 9977, 11436
AlwNI CAGNNNCTG 3 cut(s) 164, 10026, 10605
Ama87I CYCGRG 3 cut(s) 5115, 6129, 9807
Aor13HI TCCGGA 1 cut(s) 4467
Aor51HI AGCGCT 1 cut(s) 7615
ApaI GGGCCC 3 cut(s) 8183, 8519, 9359
ApaLI GTGCAC 6 cut(s) 660, 2351, 6696, 8247, 9977, 11436
ArsI GACNNNNNNTTYG 9 cut(s) 32, 299, 331, 498, 530, 5353, 5385, 10352, 10384
AseI ATTAAT 5 cut(s) 1416, 2919, 6306, 9519, 11672
AsiGI ACCGGT 5 cut(s) 1080, 2212, 5186, 11692, 12365
Asp700I GAANNNNTTC 4 cut(s) 5763, 10648, 11085, 12053
Asp718I GGTACC 2 cut(s) 7002, 10364
AspA2I CCTAGG 3 cut(s) 3874, 7091, 8759
AspLEI GCGC 5 cut(s) 4917, 5076, 7616, 9246, 11073
AsuC2I CCSGG 3 cut(s) 2222, 3180, 8390
AsuII TTCGAA 1 cut(s) 6
AsuNHI GCTAGC 2 cut(s) 1712, 8293
AvaI CYCGRG 3 cut(s) 5115, 6129, 9807
AvaII GGWCC 7 cut(s) 1093, 3841, 6099, 7732, 9468, 11021, 12296
AvrII CCTAGG 3 cut(s) 3874, 7091, 8759
BaeI ACNNNNGTAYC 2 cut(s) 5808, 5841
BamHI GGATCC 3 cut(s) 5206, 10538, 12070
BanI GGYRCC 6 cut(s) 524, 3869, 7002, 7129, 10364, 11070
BanII GRGCYC 8 cut(s) 1021, 2015, 5833, 8183, 8519, 9359, 10552, 10829
BarI GAAGNNNNNNTAC 4 cut(s) 717, 749, 5486, 5518
BauI CACGAG 1 cut(s) 12216
BbrPI CACGTG 2 cut(s) 7217, 9269
BbsI GAAGAC 8 cut(s) 2724, 4005, 4054, 7574, 7666, 8391, 8444, 11622
BbvCI CCTCAGC 3 cut(s) 3414, 7302, 8871
BceAI ACGGC 3 cut(s) 1884, 9905, 11117
BcgI CGANNNNNNTGC 4 cut(s) 3793, 3827, 6925, 6959
BclI TGATCA 5 cut(s) 2281, 4738, 8863, 9388, 10510
BcnI CCSGG 3 cut(s) 2222, 3180, 8390
BcuI ACTAGT 2 cut(s) 9056, 9713
BfoI RGCGCY 3 cut(s) 7617, 9247, 11074
BfrI CTTAAG 4 cut(s) 3065, 3598, 4208, 10636
BfuAI ACCTGC 4 cut(s) 3019, 6646, 11032, 11083
BglII AGATCT 4 cut(s) 3832, 4849, 7142, 10423
BlnI CCTAGG 3 cut(s) 3874, 7091, 8759
BlpI GCTNAGC 1 cut(s) 12395
BmcAI AGTACT 3 cut(s) 3625, 7434, 9693
Bme18I GGWCC 7 cut(s) 1093, 3841, 6099, 7732, 9468, 11021, 12296
BmeRI GACNNNNNGTC 1 cut(s) 65
BmeT110I CYCGRG 3 cut(s) 5115, 6129, 9807
BmgBI CACGTC 3 cut(s) 16, 3955, 5438
BmtI GCTAGC 2 cut(s) 1716, 8297
BpiI GAAGAC 8 cut(s) 2724, 4005, 4054, 7574, 7666, 8391, 8444, 11622
BplI GAGNNNNNCTC 2 cut(s) 9801, 9833
Bpu10I CCTNAGC 4 cut(s) 3414, 7302, 7968, 8871
Bpu1102I GCTNAGC 1 cut(s) 12395
Bpu14I TTCGAA 1 cut(s) 6
BpuMI CCSGG 3 cut(s) 2222, 3180, 8390
Bsa29I ATCGAT 1 cut(s) 5331
BsaAI YACGTR 5 cut(s) 737, 7217, 9269, 11930, 12185
BsaBI GATNNNNATC 6 cut(s) 1209, 1542, 3355, 3524, 7806, 9795
BsaHI GRCGYC 1 cut(s) 11071
BsaI GGTCTC 5 cut(s) 802, 4814, 5487, 6820, 11018
BsaWI WCCGGW 9 cut(s) 1080, 1488, 1654, 2212, 4467, 5186, 5955, 11692, 12365
BsaXI ACNNNNNCTCC 9 cut(s) 33, 1728, 1758, 2927, 2957, 6150, 6180, 10063, 10093
Bse118I RCCGGY 7 cut(s) 1080, 2212, 2431, 2888, 5186, 11692, 12365
Bse8I GATNNNNATC 6 cut(s) 1209, 1542, 3355, 3524, 7806, 9795
BseAI TCCGGA 1 cut(s) 4467
BseCI ATCGAT 1 cut(s) 5331
BseJI GATNNNNATC 6 cut(s) 1209, 1542, 3355, 3524, 7806, 9795
BseRI GAGGAG 6 cut(s) 1415, 2780, 3242, 5617, 10946, 11780
BseYI CCCAGC 4 cut(s) 3709, 8182, 9339, 12061
BsgI GTGCAG 3 cut(s) 7731, 11670, 11700
Bsh1236I CGCG 3 cut(s) 4708, 11809, 12166
Bsh1285I CGRYCG 3 cut(s) 4417, 6070, 12416
BshNI GGYRCC 6 cut(s) 524, 3869, 7002, 7129, 10364, 11070
BshTI ACCGGT 5 cut(s) 1080, 2212, 5186, 11692, 12365
BshVI ATCGAT 1 cut(s) 5331
BsiEI CGRYCG 3 cut(s) 4417, 6070, 12416
BsiHKCI CYCGRG 3 cut(s) 5115, 6129, 9807
BslFI GGGAC 7 cut(s) 1106, 2581, 4484, 5045, 6800, 7654, 9481
BsmBI CGTCTC 2 cut(s) 3119, 5742
BsmFI GGGAC 7 cut(s) 1106, 2581, 4484, 5045, 6800, 7654, 9481
Bso31I GGTCTC 5 cut(s) 802, 4814, 5487, 6820, 11018
BsoBI CYCGRG 3 cut(s) 5115, 6129, 9807
Bsp119I TTCGAA 1 cut(s) 6
Bsp120I GGGCCC 3 cut(s) 8179, 8515, 9355
Bsp13I TCCGGA 1 cut(s) 4467
Bsp1407I TGTACA 4 cut(s) 469, 4854, 7543, 12261
Bsp1720I GCTNAGC 1 cut(s) 12395
Bsp19I CCATGG 4 cut(s) 206, 2465, 5026, 9651
BspDI ATCGAT 1 cut(s) 5331
BspEI TCCGGA 1 cut(s) 4467
BspFNI CGCG 3 cut(s) 4708, 11809, 12166
BspHI TCATGA 8 cut(s) 646, 2382, 3223, 7960, 8323, 9868, 11053, 11077
BspMAI CTGCAG 4 cut(s) 3631, 4354, 8140, 10230
BspMI ACCTGC 4 cut(s) 3019, 6646, 11032, 11083
BspOI GCTAGC 2 cut(s) 1716, 8297
BspQI GCTCTTC 2 cut(s) 2020, 2277
BspT104I TTCGAA 1 cut(s) 6
BspT107I GGYRCC 6 cut(s) 524, 3869, 7002, 7129, 10364, 11070
BspTI CTTAAG 4 cut(s) 3065, 3598, 4208, 10636
BspTNI GGTCTC 5 cut(s) 802, 4814, 5487, 6820, 11018
BsrFI RCCGGY 7 cut(s) 1080, 2212, 2431, 2888, 5186, 11692, 12365
BsrGI TGTACA 4 cut(s) 469, 4854, 7543, 12261
BssAI RCCGGY 7 cut(s) 1080, 2212, 2431, 2888, 5186, 11692, 12365
BssNAI GTATAC 3 cut(s) 1723, 5499, 8973
BssNI GRCGYC 1 cut(s) 11071
BssSI CACGAG 1 cut(s) 12216
Bst1107I GTATAC 3 cut(s) 1723, 5499, 8973
Bst2BI CACGAG 1 cut(s) 12216
BstACI GRCGYC 1 cut(s) 11071
BstAFI CTTAAG 4 cut(s) 3065, 3598, 4208, 10636
BstAPI GCANNNNNTGC 5 cut(s) 1709, 2459, 6017, 11033, 11435
BstAUI TGTACA 4 cut(s) 469, 4854, 7543, 12261
BstBAI YACGTR 5 cut(s) 737, 7217, 9269, 11930, 12185
BstBI TTCGAA 1 cut(s) 6
BstDSI CCRYGG 9 cut(s) 206, 665, 2465, 2758, 4627, 4935, 5026, 9651, 11017
BstEII GGTNACC 1 cut(s) 2215
BstENI CCTNNNNNAGG 1 cut(s) 6840
BstFNI CGCG 3 cut(s) 4708, 11809, 12166
BstH2I RGCGCY 3 cut(s) 7617, 9247, 11074
BstHHI GCGC 5 cut(s) 4917, 5076, 7616, 9246, 11073
BstMCI CGRYCG 3 cut(s) 4417, 6070, 12416
BstNSI RCATGY 8 cut(s) 1250, 1477, 2104, 4399, 7203, 8633, 9733, 9934
BstPI GGTNACC 1 cut(s) 2215
BstUI CGCG 3 cut(s) 4708, 11809, 12166
BstV2I GAAGAC 8 cut(s) 2724, 4005, 4054, 7574, 7666, 8391, 8444, 11622
BstXI CCANNNNNNTGG 4 cut(s) 708, 1029, 8886, 10528
BstZ17I GTATAC 3 cut(s) 1723, 5499, 8973
Bsu15I ATCGAT 1 cut(s) 5331
BsuTUI ATCGAT 1 cut(s) 5331
BtgI CCRYGG 9 cut(s) 206, 665, 2465, 2758, 4627, 4935, 5026, 9651, 11017
BtgZI GCGATG 1 cut(s) 7815
BtrI CACGTC 3 cut(s) 16, 3955, 5438
BtsI GCAGTG 5 cut(s) 6213, 9766, 10043, 10059, 11295
BveI ACCTGC 4 cut(s) 3019, 6646, 11032, 11083
CaiI CAGNNNCTG 3 cut(s) 164, 10026, 10605
CciI TCATGA 8 cut(s) 646, 2382, 3223, 7960, 8323, 9868, 11053, 11077
CfoI GCGC 5 cut(s) 4917, 5076, 7616, 9246, 11073
Cfr10I RCCGGY 7 cut(s) 1080, 2212, 2431, 2888, 5186, 11692, 12365
ClaI ATCGAT 1 cut(s) 5331
CseI GACGC 2 cut(s) 4531, 8864
CsiI ACCWGGT 2 cut(s) 7018, 12108
CspAI ACCGGT 5 cut(s) 1080, 2212, 5186, 11692, 12365
DinI GGCGCC 1 cut(s) 11072
DraI TTTAAA 5 cut(s) 1600, 3087, 4948, 9633, 11923
DraIII CACNNNGTG 3 cut(s) 5975, 7220, 7409
DrdI GACNNNNNNGTC 3 cut(s) 4837, 7648, 9189
DriI GACNNNNNGTC 1 cut(s) 65
DseDI GACNNNNNNGTC 3 cut(s) 4837, 7648, 9189
EaeI YGGCCR 1 cut(s) 11222
Eam1105I GACNNNNNGTC 1 cut(s) 65
EciI GGCGGA 1 cut(s) 3446
Ecl136II GAGCTC 2 cut(s) 5831, 10550
Eco147I AGGCCT 1 cut(s) 6127
Eco24I GRGCYC 8 cut(s) 1021, 2015, 5833, 8183, 8519, 9359, 10552, 10829
Eco31I GGTCTC 5 cut(s) 802, 4814, 5487, 6820, 11018
Eco32I GATATC 4 cut(s) 456, 4486, 5953, 10746
Eco47I GGWCC 7 cut(s) 1093, 3841, 6099, 7732, 9468, 11021, 12296
Eco47III AGCGCT 1 cut(s) 7615
Eco53kI GAGCTC 2 cut(s) 5831, 10550
Eco72I CACGTG 2 cut(s) 7217, 9269
Eco88I CYCGRG 3 cut(s) 5115, 6129, 9807
Eco91I GGTNACC 1 cut(s) 2215
EcoICRI GAGCTC 2 cut(s) 5831, 10550
EcoNI CCTNNNNNAGG 1 cut(s) 6840
EcoO109I RGGNCCY 6 cut(s) 136, 6099, 8179, 8516, 9355, 9356
EcoO65I GGTNACC 1 cut(s) 2215
EcoRI GAATTC 2 cut(s) 4255, 9200
EcoRV GATATC 4 cut(s) 456, 4486, 5953, 10746
EcoT22I ATGCAT 3 cut(s) 5803, 7043, 8923
EcoT38I GRGCYC 8 cut(s) 1021, 2015, 5833, 8183, 8519, 9359, 10552, 10829
EgeI GGCGCC 1 cut(s) 11072
EheI GGCGCC 1 cut(s) 11072
Esp3I CGTCTC 2 cut(s) 3119, 5742
FaqI GGGAC 7 cut(s) 1106, 2581, 4484, 5045, 6800, 7654, 9481
FauI CCCGC 1 cut(s) 10125
FauNDI CATATG 7 cut(s) 3036, 5344, 5752, 6220, 7531, 11448, 11842
FbaI TGATCA 5 cut(s) 2281, 4738, 8863, 9388, 10510
FblI GTMKAC 8 cut(s) 1722, 2635, 3609, 5302, 5498, 6758, 8972, 10438
FriOI GRGCYC 8 cut(s) 1021, 2015, 5833, 8183, 8519, 9359, 10552, 10829
GlaI GCGC 5 cut(s) 4916, 5075, 7615, 9245, 11072
GsaI CCCAGC 4 cut(s) 3713, 8186, 9343, 12065
HaeII RGCGCY 3 cut(s) 7617, 9247, 11074
HgaI GACGC 2 cut(s) 4531, 8864
HhaI GCGC 5 cut(s) 4917, 5076, 7616, 9246, 11073
Hin1I GRCGYC 1 cut(s) 11071
Hin6I GCGC 5 cut(s) 4915, 5074, 7614, 9244, 11071
HinP1I GCGC 5 cut(s) 4915, 5074, 7614, 9244, 11071
HincII GTYRAC 9 cut(s) 1590, 2233, 4681, 5551, 7108, 9613, 10439, 11098, 12379
HindII GTYRAC 9 cut(s) 1590, 2233, 4681, 5551, 7108, 9613, 10439, 11098, 12379
HindIII AAGCTT 7 cut(s) 72, 2814, 3074, 4610, 5762, 6990, 7704
HpaI GTTAAC 2 cut(s) 7108, 12379
Hpy99I CGWCG 3 cut(s) 1125, 1128, 4415
Hsp92I GRCGYC 1 cut(s) 11071
HspAI GCGC 5 cut(s) 4915, 5074, 7614, 9244, 11071
KasI GGCGCC 1 cut(s) 11070
Kpn2I TCCGGA 1 cut(s) 4467
KpnI GGTACC 2 cut(s) 7006, 10368
KroI GCCGGC 1 cut(s) 2431
KroNI GCCGGC 1 cut(s) 2433
Ksp22I TGATCA 5 cut(s) 2281, 4738, 8863, 9388, 10510
KspAI GTTAAC 2 cut(s) 7108, 12379
LguI GCTCTTC 2 cut(s) 2020, 2277
MabI ACCWGGT 2 cut(s) 7018, 12108
MfeI CAATTG 7 cut(s) 2853, 5087, 7008, 9594, 10868, 10880, 12270
Mly113I GGCGCC 1 cut(s) 11071
MmeI TCCRAC 8 cut(s) 1714, 4731, 7455, 9153, 10009, 10219, 10906, 11641
Mph1103I ATGCAT 3 cut(s) 5803, 7043, 8923
MroI TCCGGA 1 cut(s) 4467
MroNI GCCGGC 1 cut(s) 2431
MroXI GAANNNNTTC 4 cut(s) 5763, 10648, 11085, 12053
MspA1I CMGCKG 8 cut(s) 2906, 6017, 6893, 7301, 9671, 11221, 11684, 11881
MspCI CTTAAG 4 cut(s) 3065, 3598, 4208, 10636
MssI GTTTAAAC 1 cut(s) 1600
MunI CAATTG 7 cut(s) 2853, 5087, 7008, 9594, 10868, 10880, 12270
MvnI CGCG 3 cut(s) 4708, 11809, 12166
NaeI GCCGGC 1 cut(s) 2433
NarI GGCGCC 1 cut(s) 11071
NciI CCSGG 3 cut(s) 2222, 3180, 8390
NcoI CCATGG 4 cut(s) 206, 2465, 5026, 9651
NdeI CATATG 7 cut(s) 3036, 5344, 5752, 6220, 7531, 11448, 11842
NgoMIV GCCGGC 1 cut(s) 2431
NheI GCTAGC 2 cut(s) 1712, 8293
NsiI ATGCAT 3 cut(s) 5803, 7043, 8923
NspI RCATGY 8 cut(s) 1250, 1477, 2104, 4399, 7203, 8633, 9733, 9934
NspV TTCGAA 1 cut(s) 6
PaeI GCATGC 1 cut(s) 7203
PaeR7I CTCGAG 3 cut(s) 5115, 6129, 9807
PagI TCATGA 8 cut(s) 646, 2382, 3223, 7960, 8323, 9868, 11053, 11077
PceI AGGCCT 1 cut(s) 6127
PciI ACATGT 2 cut(s) 2100, 4395
PciSI GCTCTTC 2 cut(s) 2020, 2277
PcsI WCGNNNNNNNCGW 2 cut(s) 12, 11806
PdiI GCCGGC 1 cut(s) 2433
PdmI GAANNNNTTC 4 cut(s) 5763, 10648, 11085, 12053
PflFI GACNNNGTC 3 cut(s) 2912, 7741, 7865
PflMI CCANNNNNTGG 3 cut(s) 760, 2345, 6896
PfoI TCCNGGA 1 cut(s) 502
PinAI ACCGGT 5 cut(s) 1080, 2212, 5186, 11692, 12365
Ple19I CGATCG 1 cut(s) 6070
PluTI GGCGCC 1 cut(s) 11074
PmaCI CACGTG 2 cut(s) 7217, 9269
PmeI GTTTAAAC 1 cut(s) 1600
PmlI CACGTG 2 cut(s) 7217, 9269
Ppu21I YACGTR 5 cut(s) 737, 7217, 9269, 11930, 12185
PpuMI RGGWCCY 1 cut(s) 6099
PscI ACATGT 2 cut(s) 2100, 4395
PshBI ATTAAT 5 cut(s) 1416, 2919, 6306, 9519, 11672
PsiI TTATAA 3 cut(s) 2120, 5429, 5990
Psp124BI GAGCTC 2 cut(s) 5833, 10552
Psp5II RGGWCCY 1 cut(s) 6099
PspCI CACGTG 2 cut(s) 7217, 9269
PspEI GGTNACC 1 cut(s) 2215
PspFI CCCAGC 4 cut(s) 3709, 8182, 9339, 12061
PspOMI GGGCCC 3 cut(s) 8179, 8515, 9355
PspPPI RGGWCCY 1 cut(s) 6099
PspXI VCTCGAGB 2 cut(s) 5115, 6129
PsrI GAACNNNNNNTAC 4 cut(s) 2634, 2656, 2666, 2688
PstI CTGCAG 4 cut(s) 3631, 4354, 8140, 10230
PstNI CAGNNNCTG 3 cut(s) 164, 10026, 10605
PsyI GACNNNGTC 3 cut(s) 2912, 7741, 7865
PvuI CGATCG 1 cut(s) 6070
PvuII CAGCTG 6 cut(s) 2906, 6017, 6893, 9671, 11684, 11881
SacI GAGCTC 2 cut(s) 5833, 10552
SalI GTCGAC 1 cut(s) 10437
SapI GCTCTTC 2 cut(s) 2020, 2277
ScaI AGTACT 3 cut(s) 3625, 7434, 9693
SexAI ACCWGGT 2 cut(s) 7018, 12108
SfoI GGCGCC 1 cut(s) 11072
Sfr274I CTCGAG 3 cut(s) 5115, 6129, 9807
SfuI TTCGAA 1 cut(s) 6
SgrAI CRCCGGYG 1 cut(s) 12365
SinI GGWCC 7 cut(s) 1093, 3841, 6099, 7732, 9468, 11021, 12296
SlaI CTCGAG 3 cut(s) 5115, 6129, 9807
SpeI ACTAGT 2 cut(s) 9056, 9713
SphI GCATGC 1 cut(s) 7203
SseBI AGGCCT 1 cut(s) 6127
SspDI GGCGCC 1 cut(s) 11070
SspI AATATT 7 cut(s) 926, 2575, 5635, 6376, 6906, 7120, 7515
SstI GAGCTC 2 cut(s) 5833, 10552
StuI AGGCCT 1 cut(s) 6127
TaqII GACCGA 2 cut(s) 481, 12430
TauI GCSGC 7 cut(s) 1283, 4205, 7492, 9759, 11224, 11809, 12169
Tth111I GACNNNGTC 3 cut(s) 2912, 7741, 7865
Van91I CCANNNNNTGG 3 cut(s) 760, 2345, 6896
Vha464I CTTAAG 4 cut(s) 3065, 3598, 4208, 10636
VneI GTGCAC 6 cut(s) 660, 2351, 6696, 8247, 9977, 11436
VpaK11BI GGWCC 7 cut(s) 1093, 3841, 6099, 7732, 9468, 11021, 12296
VspI ATTAAT 5 cut(s) 1416, 2919, 6306, 9519, 11672
XagI CCTNNNNNAGG 1 cut(s) 6840
XbaI TCTAGA 4 cut(s) 5599, 7336, 9602, 10544
XceI RCATGY 8 cut(s) 1250, 1477, 2104, 4399, 7203, 8633, 9733, 9934
XcmI CCANNNNNNNNNTGG 4 cut(s) 1029, 6819, 7853, 10981
XhoI CTCGAG 3 cut(s) 5115, 6129, 9807
XmaJI CCTAGG 3 cut(s) 3874, 7091, 8759
XmiI GTMKAC 8 cut(s) 1722, 2635, 3609, 5302, 5498, 6758, 8972, 10438
XmnI GAANNNNTTC 4 cut(s) 5763, 10648, 11085, 12053
ZrmI AGTACT 3 cut(s) 3625, 7434, 9693
Zsp2I ATGCAT 3 cut(s) 5803, 7043, 8923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.