Vacuolar protein sorting-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48090 AT1G48090 AT1G48090 AT1G48090 AT1G48090 AT1G48090 |
| fragaria_vesca | FvH4_4g20980 FvH4_4g20980 |
| malus_domestica | MD13G1146800.v1.1 MD16G1145300.v1.1 MD16G1145600.v1.1 MD16G1156200.v1.1 MD16G1156300.v1.1 MD16G1156600.v1.1 |
| prunus_persica | Prupe.1G110200_v2.0.a1 Prupe.1G110200_v2.0.a1 Prupe.1G110200_v2.0.a1 Prupe.1G110200_v2.0.a1 Prupe.3G141600_v2.0.a1 |
| pyrus_communis | pycom13g12640 pycom16g12480 |
| rosa_chinensis | RchiOBHm_Chr4g0407731 RchiOBHm_Chr4g0407781 RchiOBHm_Chr4g0426501 |
| rosa_laevigata | RLG00000007293 |
| rosa_multiflora | Rmu_sc0000600.1_g000056 Rmu_sc0001821.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00368530 |
| rosa_rugosa | Rorug04G0092700 Rorug04G0212200 Rorug04G0212400 Rorug04G0212400 |
| rosa_samantha | Rh4AG268100 Rh4BG274300 Rh4CG288300 Rh4CG288800 Rh4DG271100 |
| rosa_wichuraiana | Rw4G011930 Rw4G023260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 5 cut(s) | 2129, 5441, 8522, 10397, 12053 |
| AarI | CACCTGC | 1 cut(s) | 1345 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 4849, 9021 |
| Acc16I | TGCGCA | 2 cut(s) | 2336, 6972 |
| Acc36I | ACCTGC | 6 cut(s) | 751, 1345, 1947, 3284, 10462, 10912 |
| Acc65I | GGTACC | 2 cut(s) | 185, 7011 |
| AccB1I | GGYRCC | 7 cut(s) | 185, 1003, 3881, 7011, 7741, 11564, 12247 |
| AccB7I | CCANNNNNTGG | 5 cut(s) | 401, 2360, 10838, 11528, 11675 |
| AccI | GTMKAC | 5 cut(s) | 3224, 5314, 5562, 6767, 7351 |
| AccII | CGCG | 4 cut(s) | 831, 6847, 9273, 9772 |
| AccIII | TCCGGA | 2 cut(s) | 856, 11805 |
| AcoI | YGGCCR | 3 cut(s) | 283, 4048, 11666 |
| AcuI | CTGAAG | 7 cut(s) | 1362, 4029, 4158, 4344, 10040, 11395, 12222 |
| AcvI | CACGTG | 1 cut(s) | 9101 |
| AdeI | CACNNNGTG | 1 cut(s) | 5984 |
| AfeI | AGCGCT | 1 cut(s) | 12199 |
| AflII | CTTAAG | 1 cut(s) | 3077 |
| AflIII | ACRYGT | 4 cut(s) | 13, 4407, 10384, 11148 |
| AhlI | ACTAGT | 3 cut(s) | 2975, 9542, 10196 |
| AjiI | CACGTC | 2 cut(s) | 5450, 6444 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2854, 2886, 4455, 4487 |
| Alw21I | GWGCWC | 9 cut(s) | 817, 1921, 3858, 5301, 6145, 8113, 9988, 11269, 11395 |
| Alw44I | GTGCAC | 5 cut(s) | 3854, 5297, 8109, 9984, 11265 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 90, 164, 5024, 9883, 10434 |
| Ama87I | CYCGRG | 2 cut(s) | 5127, 6138 |
| Aor13HI | TCCGGA | 2 cut(s) | 856, 11805 |
| Aor51HI | AGCGCT | 1 cut(s) | 12199 |
| ApaLI | GTGCAC | 5 cut(s) | 3854, 5297, 8109, 9984, 11265 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2312, 2344 |
| AseI | ATTAAT | 6 cut(s) | 1422, 2931, 5321, 9834, 10718, 11501 |
| Asp718I | GGTACC | 2 cut(s) | 185, 7011 |
| AspA2I | CCTAGG | 4 cut(s) | 3886, 6265, 7100, 11209 |
| AsuC2I | CCSGG | 2 cut(s) | 8381, 11891 |
| AsuII | TTCGAA | 4 cut(s) | 31, 7970, 10063, 11197 |
| AsuNHI | GCTAGC | 3 cut(s) | 1718, 10558, 12224 |
| AvaI | CYCGRG | 2 cut(s) | 5127, 6138 |
| AvaII | GGWCC | 9 cut(s) | 1019, 1093, 8042, 8764, 9187, 9300, 10367, 10850, 11971 |
| AvrII | CCTAGG | 4 cut(s) | 3886, 6265, 7100, 11209 |
| AxyI | CCTNAGG | 1 cut(s) | 702 |
| BaeGI | GKGCMC | 6 cut(s) | 2313, 3858, 5301, 8113, 9988, 11269 |
| BamHI | GGATCC | 2 cut(s) | 6107, 11899 |
| BanI | GGYRCC | 7 cut(s) | 185, 1003, 3881, 7011, 7741, 11564, 12247 |
| BanII | GRGCYC | 3 cut(s) | 817, 2486, 5842 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 9079, 9111 |
| BauI | CACGAG | 2 cut(s) | 9636, 11637 |
| BbrPI | CACGTG | 1 cut(s) | 9101 |
| BbsI | GAAGAC | 7 cut(s) | 2736, 4492, 5736, 6590, 6994, 7514, 10302 |
| Bbv12I | GWGCWC | 9 cut(s) | 817, 1921, 3858, 5301, 6145, 8113, 9988, 11269, 11395 |
| BbvCI | CCTCAGC | 5 cut(s) | 1368, 2775, 3339, 8703, 8935 |
| BceAI | ACGGC | 1 cut(s) | 2774 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 11, 45, 1892, 1926, 6923, 6957, 6973, 7007 |
| BciVI | GTATCC | 5 cut(s) | 3316, 4657, 6350, 10030, 10686 |
| BclI | TGATCA | 3 cut(s) | 2296, 6667, 10339 |
| BcnI | CCSGG | 2 cut(s) | 8381, 11891 |
| BcuI | ACTAGT | 3 cut(s) | 2975, 9542, 10196 |
| BfmI | CTRYAG | 9 cut(s) | 1058, 2487, 4212, 4413, 5077, 6342, 7239, 8441, 9860 |
| BfoI | RGCGCY | 1 cut(s) | 12201 |
| BfrI | CTTAAG | 1 cut(s) | 3077 |
| BfuAI | ACCTGC | 6 cut(s) | 751, 1345, 1947, 3284, 10462, 10912 |
| BfuI | GTATCC | 5 cut(s) | 3316, 4657, 6350, 10030, 10686 |
| BlnI | CCTAGG | 4 cut(s) | 3886, 6265, 7100, 11209 |
| BlpI | GCTNAGC | 2 cut(s) | 537, 10563 |
| BmcAI | AGTACT | 2 cut(s) | 7374, 9522 |
| Bme18I | GGWCC | 9 cut(s) | 1019, 1093, 8042, 8764, 9187, 9300, 10367, 10850, 11971 |
| BmeT110I | CYCGRG | 2 cut(s) | 5127, 6138 |
| BmgBI | CACGTC | 2 cut(s) | 5450, 6444 |
| BmrI | ACTGGG | 2 cut(s) | 7405, 11433 |
| BmtI | GCTAGC | 3 cut(s) | 1722, 10562, 12228 |
| BmuI | ACTGGG | 2 cut(s) | 7405, 11433 |
| BoxI | GACNNNNGTC | 1 cut(s) | 9543 |
| BpiI | GAAGAC | 7 cut(s) | 2736, 4492, 5736, 6590, 6994, 7514, 10302 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 3788, 3820, 12077, 12109 |
| Bpu10I | CCTNAGC | 7 cut(s) | 1368, 2775, 3339, 8216, 8703, 8935, 10651 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 537, 10563 |
| Bpu14I | TTCGAA | 4 cut(s) | 31, 7970, 10063, 11197 |
| BpuMI | CCSGG | 2 cut(s) | 8381, 11891 |
| BsaAI | YACGTR | 6 cut(s) | 3956, 4046, 8754, 9101, 10385, 11759 |
| BsaBI | GATNNNNATC | 2 cut(s) | 7668, 9624 |
| BsaI | GGTCTC | 2 cut(s) | 10847, 11411 |
| BsaWI | WCCGGW | 4 cut(s) | 856, 1494, 11234, 11805 |
| Bse21I | CCTNAGG | 1 cut(s) | 702 |
| Bse3DI | GCAATG | 9 cut(s) | 472, 1151, 3822, 5183, 6029, 6840, 7554, 8408, 12117 |
| Bse8I | GATNNNNATC | 2 cut(s) | 7668, 9624 |
| BseAI | TCCGGA | 2 cut(s) | 856, 11805 |
| BseJI | GATNNNNATC | 2 cut(s) | 7668, 9624 |
| BseMI | GCAATG | 9 cut(s) | 472, 1151, 3822, 5183, 6029, 6840, 7554, 8408, 12117 |
| BseRI | GAGGAG | 7 cut(s) | 2792, 2795, 2826, 4495, 7372, 11430, 12085 |
| BseSI | GKGCMC | 6 cut(s) | 2313, 3858, 5301, 8113, 9988, 11269 |
| BseYI | CCCAGC | 1 cut(s) | 3721 |
| BsgI | GTGCAG | 9 cut(s) | 5, 1502, 2054, 3074, 3610, 3660, 7947, 11499, 11529 |
| Bsh1236I | CGCG | 4 cut(s) | 831, 6847, 9273, 9772 |
| BshNI | GGYRCC | 7 cut(s) | 185, 1003, 3881, 7011, 7741, 11564, 12247 |
| BsiHKAI | GWGCWC | 9 cut(s) | 817, 1921, 3858, 5301, 6145, 8113, 9988, 11269, 11395 |
| BsiHKCI | CYCGRG | 2 cut(s) | 5127, 6138 |
| BsiSI | CCGG | 9 cut(s) | 286, 857, 1495, 5031, 8381, 9026, 11235, 11806, 11891 |
| BslFI | GGGAC | 8 cut(s) | 1106, 4496, 6076, 6809, 8055, 8414, 9313, 11706 |
| BsmFI | GGGAC | 8 cut(s) | 1106, 4496, 6076, 6809, 8055, 8414, 9313, 11706 |
| Bso31I | GGTCTC | 2 cut(s) | 10847, 11411 |
| BsoBI | CYCGRG | 2 cut(s) | 5127, 6138 |
| Bsp119I | TTCGAA | 4 cut(s) | 31, 7970, 10063, 11197 |
| Bsp13I | TCCGGA | 2 cut(s) | 856, 11805 |
| Bsp1407I | TGTACA | 3 cut(s) | 469, 1728, 7483 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 537, 10563 |
| Bsp19I | CCATGG | 3 cut(s) | 55, 2477, 10846 |
| BspEI | TCCGGA | 2 cut(s) | 856, 11805 |
| BspFNI | CGCG | 4 cut(s) | 831, 6847, 9273, 9772 |
| BspMAI | CTGCAG | 4 cut(s) | 1062, 2491, 7243, 9864 |
| BspMI | ACCTGC | 6 cut(s) | 751, 1345, 1947, 3284, 10462, 10912 |
| BspOI | GCTAGC | 3 cut(s) | 1722, 10562, 12228 |
| BspQI | GCTCTTC | 4 cut(s) | 2026, 4608, 5008, 8946 |
| BspT104I | TTCGAA | 4 cut(s) | 31, 7970, 10063, 11197 |
| BspT107I | GGYRCC | 7 cut(s) | 185, 1003, 3881, 7011, 7741, 11564, 12247 |
| BspTI | CTTAAG | 1 cut(s) | 3077 |
| BspTNI | GGTCTC | 2 cut(s) | 10847, 11411 |
| BsrDI | GCAATG | 9 cut(s) | 472, 1151, 3822, 5183, 6029, 6840, 7554, 8408, 12117 |
| BsrGI | TGTACA | 3 cut(s) | 469, 1728, 7483 |
| BssSI | CACGAG | 2 cut(s) | 9636, 11637 |
| Bst2BI | CACGAG | 2 cut(s) | 9636, 11637 |
| BstAFI | CTTAAG | 1 cut(s) | 3077 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1715, 11264 |
| BstAUI | TGTACA | 3 cut(s) | 469, 1728, 7483 |
| BstBAI | YACGTR | 6 cut(s) | 3956, 4046, 8754, 9101, 10385, 11759 |
| BstBI | TTCGAA | 4 cut(s) | 31, 7970, 10063, 11197 |
| BstDSI | CCRYGG | 4 cut(s) | 55, 2477, 4639, 10846 |
| BstEII | GGTNACC | 1 cut(s) | 3065 |
| BstENI | CCTNNNNNAGG | 4 cut(s) | 1341, 6130, 10286, 10458 |
| BstFNI | CGCG | 4 cut(s) | 831, 6847, 9273, 9772 |
| BstH2I | RGCGCY | 1 cut(s) | 12201 |
| BstNSI | RCATGY | 7 cut(s) | 1250, 3547, 4411, 5517, 6066, 6977, 8495 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 9543 |
| BstPI | GGTNACC | 1 cut(s) | 3065 |
| BstSFI | CTRYAG | 9 cut(s) | 1058, 2487, 4212, 4413, 5077, 6342, 7239, 8441, 9860 |
| BstSLI | GKGCMC | 6 cut(s) | 2313, 3858, 5301, 8113, 9988, 11269 |
| BstSNI | TACGTA | 2 cut(s) | 3956, 8754 |
| BstUI | CGCG | 4 cut(s) | 831, 6847, 9273, 9772 |
| BstV2I | GAAGAC | 7 cut(s) | 2736, 4492, 5736, 6590, 6994, 7514, 10302 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 8718, 10357 |
| Bsu36I | CCTNAGG | 1 cut(s) | 702 |
| BsuI | GTATCC | 5 cut(s) | 3316, 4657, 6350, 10030, 10686 |
| BtgI | CCRYGG | 4 cut(s) | 55, 2477, 4639, 10846 |
| BtgZI | GCGATG | 2 cut(s) | 1799, 11588 |
| BtrI | CACGTC | 2 cut(s) | 5450, 6444 |
| BtsI | GCAGTG | 4 cut(s) | 6222, 8742, 9595, 9872 |
| BveI | ACCTGC | 6 cut(s) | 751, 1345, 1947, 3284, 10462, 10912 |
| CaiI | CAGNNNCTG | 5 cut(s) | 90, 164, 5024, 9883, 10434 |
| CseI | GACGC | 4 cut(s) | 5408, 6836, 7703, 12217 |
| CsiI | ACCWGGT | 2 cut(s) | 7027, 11937 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2662, 2697, 3565, 3600 |
| DraI | TTTAAA | 5 cut(s) | 450, 1606, 3462, 3756, 11752 |
| DraIII | CACNNNGTG | 1 cut(s) | 5984 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 4849, 9021 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 4849, 9021 |
| EaeI | YGGCCR | 3 cut(s) | 283, 4048, 11666 |
| EciI | GGCGGA | 3 cut(s) | 3458, 6803, 8015 |
| Ecl136II | GAGCTC | 1 cut(s) | 815 |
| Eco105I | TACGTA | 2 cut(s) | 3956, 8754 |
| Eco147I | AGGCCT | 3 cut(s) | 1056, 5425, 6136 |
| Eco24I | GRGCYC | 3 cut(s) | 817, 2486, 5842 |
| Eco31I | GGTCTC | 2 cut(s) | 10847, 11411 |
| Eco32I | GATATC | 3 cut(s) | 456, 9690, 10575 |
| Eco47I | GGWCC | 9 cut(s) | 1019, 1093, 8042, 8764, 9187, 9300, 10367, 10850, 11971 |
| Eco47III | AGCGCT | 1 cut(s) | 12199 |
| Eco53kI | GAGCTC | 1 cut(s) | 815 |
| Eco57I | CTGAAG | 7 cut(s) | 1362, 4029, 4158, 4344, 10040, 11395, 12222 |
| Eco72I | CACGTG | 1 cut(s) | 9101 |
| Eco81I | CCTNAGG | 1 cut(s) | 702 |
| Eco88I | CYCGRG | 2 cut(s) | 5127, 6138 |
| Eco91I | GGTNACC | 1 cut(s) | 3065 |
| EcoICRI | GAGCTC | 1 cut(s) | 815 |
| EcoNI | CCTNNNNNAGG | 4 cut(s) | 1341, 6130, 10286, 10458 |
| EcoO109I | RGGNCCY | 4 cut(s) | 136, 1019, 8764, 9187 |
| EcoO65I | GGTNACC | 1 cut(s) | 3065 |
| EcoRI | GAATTC | 4 cut(s) | 3557, 9032, 10090, 10176 |
| EcoRV | GATATC | 3 cut(s) | 456, 9690, 10575 |
| EcoT22I | ATGCAT | 5 cut(s) | 5812, 6229, 9071, 10689, 12062 |
| EcoT38I | GRGCYC | 3 cut(s) | 817, 2486, 5842 |
| FaqI | GGGAC | 8 cut(s) | 1106, 4496, 6076, 6809, 8055, 8414, 9313, 11706 |
| FauI | CCCGC | 2 cut(s) | 6408, 9954 |
| FauNDI | CATATG | 9 cut(s) | 973, 5356, 5761, 6229, 7471, 11277, 11671, 11959, 12172 |
| FbaI | TGATCA | 3 cut(s) | 2296, 6667, 10339 |
| FblI | GTMKAC | 5 cut(s) | 3224, 5314, 5562, 6767, 7351 |
| FriOI | GRGCYC | 3 cut(s) | 817, 2486, 5842 |
| FspAI | RTGCGCAY | 1 cut(s) | 2336 |
| FspI | TGCGCA | 2 cut(s) | 2336, 6972 |
| GsaI | CCCAGC | 1 cut(s) | 3725 |
| HaeII | RGCGCY | 1 cut(s) | 12201 |
| HapII | CCGG | 9 cut(s) | 286, 857, 1495, 5031, 8381, 9026, 11235, 11806, 11891 |
| HgaI | GACGC | 4 cut(s) | 5408, 6836, 7703, 12217 |
| HindIII | AAGCTT | 9 cut(s) | 72, 539, 876, 1807, 4622, 5771, 7334, 9491, 9761 |
| HpaI | GTTAAC | 2 cut(s) | 7117, 8539 |
| HpaII | CCGG | 9 cut(s) | 286, 857, 1495, 5031, 8381, 9026, 11235, 11806, 11891 |
| Hpy99I | CGWCG | 3 cut(s) | 1125, 6852, 6998 |
| Kpn2I | TCCGGA | 2 cut(s) | 856, 11805 |
| KpnI | GGTACC | 2 cut(s) | 189, 7015 |
| Ksp22I | TGATCA | 3 cut(s) | 2296, 6667, 10339 |
| KspAI | GTTAAC | 2 cut(s) | 7117, 8539 |
| LguI | GCTCTTC | 4 cut(s) | 2026, 4608, 5008, 8946 |
| MabI | ACCWGGT | 2 cut(s) | 7027, 11937 |
| MfeI | CAATTG | 4 cut(s) | 6249, 6580, 10697, 12295 |
| Mph1103I | ATGCAT | 5 cut(s) | 5812, 6229, 9071, 10689, 12062 |
| MroI | TCCGGA | 2 cut(s) | 856, 11805 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1324, 3240, 4374, 5226, 5343, 8716, 10355 |
| MspA1I | CMGCKG | 7 cut(s) | 1283, 2918, 3338, 4364, 6902, 11513, 11710 |
| MspCI | CTTAAG | 1 cut(s) | 3077 |
| MspI | CCGG | 9 cut(s) | 286, 857, 1495, 5031, 8381, 9026, 11235, 11806, 11891 |
| MssI | GTTTAAAC | 1 cut(s) | 1606 |
| MunI | CAATTG | 4 cut(s) | 6249, 6580, 10697, 12295 |
| MvnI | CGCG | 4 cut(s) | 831, 6847, 9273, 9772 |
| NciI | CCSGG | 2 cut(s) | 8381, 11891 |
| NcoI | CCATGG | 3 cut(s) | 55, 2477, 10846 |
| NdeI | CATATG | 9 cut(s) | 973, 5356, 5761, 6229, 7471, 11277, 11671, 11959, 12172 |
| NheI | GCTAGC | 3 cut(s) | 1718, 10558, 12224 |
| NsbI | TGCGCA | 2 cut(s) | 2336, 6972 |
| NsiI | ATGCAT | 5 cut(s) | 5812, 6229, 9071, 10689, 12062 |
| NspI | RCATGY | 7 cut(s) | 1250, 3547, 4411, 5517, 6066, 6977, 8495 |
| NspV | TTCGAA | 4 cut(s) | 31, 7970, 10063, 11197 |
| PaeI | GCATGC | 1 cut(s) | 8495 |
| PaeR7I | CTCGAG | 2 cut(s) | 5127, 6138 |
| PaqCI | CACCTGC | 1 cut(s) | 1345 |
| PceI | AGGCCT | 3 cut(s) | 1056, 5425, 6136 |
| PciI | ACATGT | 1 cut(s) | 4407 |
| PciSI | GCTCTTC | 4 cut(s) | 2026, 4608, 5008, 8946 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 11635 |
| PflFI | GACNNNGTC | 6 cut(s) | 491, 2924, 6998, 7603, 9224, 11939 |
| PflMI | CCANNNNNTGG | 5 cut(s) | 401, 2360, 10838, 11528, 11675 |
| PfoI | TCCNGGA | 2 cut(s) | 400, 8617 |
| PmaCI | CACGTG | 1 cut(s) | 9101 |
| PmeI | GTTTAAAC | 1 cut(s) | 1606 |
| PmlI | CACGTG | 1 cut(s) | 9101 |
| Ppu21I | YACGTR | 6 cut(s) | 3956, 4046, 8754, 9101, 10385, 11759 |
| PpuMI | RGGWCCY | 3 cut(s) | 1019, 8764, 9187 |
| PscI | ACATGT | 1 cut(s) | 4407 |
| PshAI | GACNNNNGTC | 1 cut(s) | 9543 |
| PshBI | ATTAAT | 6 cut(s) | 1422, 2931, 5321, 9834, 10718, 11501 |
| PsiI | TTATAA | 5 cut(s) | 2129, 5441, 8522, 10397, 12053 |
| Psp124BI | GAGCTC | 1 cut(s) | 817 |
| Psp5II | RGGWCCY | 3 cut(s) | 1019, 8764, 9187 |
| PspCI | CACGTG | 1 cut(s) | 9101 |
| PspEI | GGTNACC | 1 cut(s) | 3065 |
| PspFI | CCCAGC | 1 cut(s) | 3721 |
| PspPPI | RGGWCCY | 3 cut(s) | 1019, 8764, 9187 |
| PspXI | VCTCGAGB | 2 cut(s) | 5127, 6138 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 6310, 6342, 6513, 6545 |
| PstI | CTGCAG | 4 cut(s) | 1062, 2491, 7243, 9864 |
| PstNI | CAGNNNCTG | 5 cut(s) | 90, 164, 5024, 9883, 10434 |
| PsyI | GACNNNGTC | 6 cut(s) | 491, 2924, 6998, 7603, 9224, 11939 |
| PvuII | CAGCTG | 7 cut(s) | 1283, 2918, 3338, 4364, 6902, 11513, 11710 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1324, 3240, 4374, 5226, 5343, 8716, 10355 |
| SacI | GAGCTC | 1 cut(s) | 817 |
| SalI | GTCGAC | 2 cut(s) | 6766, 7350 |
| SapI | GCTCTTC | 4 cut(s) | 2026, 4608, 5008, 8946 |
| ScaI | AGTACT | 2 cut(s) | 7374, 9522 |
| SexAI | ACCWGGT | 2 cut(s) | 7027, 11937 |
| SfcI | CTRYAG | 9 cut(s) | 1058, 2487, 4212, 4413, 5077, 6342, 7239, 8441, 9860 |
| Sfr274I | CTCGAG | 2 cut(s) | 5127, 6138 |
| SfuI | TTCGAA | 4 cut(s) | 31, 7970, 10063, 11197 |
| SinI | GGWCC | 9 cut(s) | 1019, 1093, 8042, 8764, 9187, 9300, 10367, 10850, 11971 |
| SlaI | CTCGAG | 2 cut(s) | 5127, 6138 |
| SmiI | ATTTAAAT | 1 cut(s) | 3462 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1324, 3240, 4374, 5226, 5343, 8716, 10355 |
| SnaBI | TACGTA | 2 cut(s) | 3956, 8754 |
| SpeI | ACTAGT | 3 cut(s) | 2975, 9542, 10196 |
| SphI | GCATGC | 1 cut(s) | 8495 |
| SseBI | AGGCCT | 3 cut(s) | 1056, 5425, 6136 |
| SspI | AATATT | 4 cut(s) | 5650, 6385, 7129, 7455 |
| SstI | GAGCTC | 1 cut(s) | 817 |
| StuI | AGGCCT | 3 cut(s) | 1056, 5425, 6136 |
| SwaI | ATTTAAAT | 1 cut(s) | 3462 |
| TaqII | GACCGA | 2 cut(s) | 1508, 8394 |
| TauI | GCSGC | 4 cut(s) | 1128, 2150, 9588, 11443 |
| TspGWI | ACGGA | 7 cut(s) | 2829, 3644, 3893, 4628, 5768, 8152, 10103 |
| Tth111I | GACNNNGTC | 6 cut(s) | 491, 2924, 6998, 7603, 9224, 11939 |
| Van91I | CCANNNNNTGG | 5 cut(s) | 401, 2360, 10838, 11528, 11675 |
| Vha464I | CTTAAG | 1 cut(s) | 3077 |
| VneI | GTGCAC | 5 cut(s) | 3854, 5297, 8109, 9984, 11265 |
| VpaK11BI | GGWCC | 9 cut(s) | 1019, 1093, 8042, 8764, 9187, 9300, 10367, 10850, 11971 |
| VspI | ATTAAT | 6 cut(s) | 1422, 2931, 5321, 9834, 10718, 11501 |
| XagI | CCTNNNNNAGG | 4 cut(s) | 1341, 6130, 10286, 10458 |
| XbaI | TCTAGA | 6 cut(s) | 4813, 5614, 7276, 8326, 9434, 11536 |
| XceI | RCATGY | 7 cut(s) | 1250, 3547, 4411, 5517, 6066, 6977, 8495 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 6828 |
| XhoI | CTCGAG | 2 cut(s) | 5127, 6138 |
| XmaJI | CCTAGG | 4 cut(s) | 3886, 6265, 7100, 11209 |
| XmiI | GTMKAC | 5 cut(s) | 3224, 5314, 5562, 6767, 7351 |
| ZrmI | AGTACT | 2 cut(s) | 7374, 9522 |
| Zsp2I | ATGCAT | 5 cut(s) | 5812, 6229, 9071, 10689, 12062 |