MD13G1146800.v1.1

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0002758
Physical Location & Seq
Forward (+)
11464377 .. 11498252
33876 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1146800.v1.1.491

Sequence Viewer

Length: 12408 bp
ATGTTCGAAGCATACGTTCTGCATTTGCTTCGAAGATATTTGGGGGAATATGTCCATGGACTCTCAGTTGAAGCTTTAAGAATCAGTGTCTGGCAAGGTGATGTTGTTCTCAAAGATTTGAAATTGAAGGCAGAGGCCTTAAATTCACTGAAACTTCCAGTCACTGTGAAAGCTGGTTTTATTGGTACCATTACATTAAAGGTTCCCTGGAAAAGTTTAGGCAAAGAACCTGTCATTGTTCTCATTGACCGTGTATTCATTCTTGCTTATCCACTTACTGATGGCCAGAATCTCAAGGAGGACAGGGAAAAACTGTTTGAAGTCAAACTTCAACAGATTGAGGAAACAGAGGCAGCAACCCTTGAAGCAATGTCGAAGTCAAAGCTAGGAAGTCCACCTCCTGGGAATTCATGGCTAGGTTCCCTCATTGCTACTATTATCGGAAATCTGAAGATATCAATTAGCAATGTACATGTTAGATATGAGGATTCAACCAGTAATCCAGGACATCCATTTTGTTCGGGTGTTACTTTAGCCAAGCTGGCTGCTGTTACTATGGATGAGCAAGGGAATGAAACATTTGATACCAGTGGTGCACTTGATAAGTTACGGAAGTCCTTGCAACTTGAGAGGCTTGCTATGTATCATGATTCTGGTAGTGTTCCTTGGAAGATAGATAAGGGATGGGAAGATCTTACTCCTGAGGAATGGATTCAGATCTTTGAAGATGGTATAAATGAACCTGCTGCTGCTGCGAATCGCAAGTATTTGGTGTCACCTATAAATGGAGTTTTAAAATATCACCGCATTGGAGATCAAGAAAGAAATGATTCAGAGGTTCCGTTTGAGAAGGCTTCCCTCGTGCTGAGTGATGTTTCTTTGACAGTAATTGAGGCCCAATATTATGATTGGATAAAACTATTAGAAGTTGTTTCAAGATACAAGACTTATGTTGTTGTTTCCCATCTGAGACCTGTGGTGCCAGTTTCAGAGGGTCCGTATTTGTGGTGGCATTACGCTACTAAAGCATCCCTGCAGCAGAAGAAAATGTGTTACCGATTCTCATGGGACCGCATTCGAGATCTTTGTCAGCTTCGTCGCCGTTATATTCAGTTGTACGCCGGTTCACTGCAACACTTGTCAAATGTTAAGAATGCAGAAATTAGAGAAATTGAGAGAGATCTGGATCCTAAAGTAATTCTTTTATGGAGGTTACTTGCACATGCAAAGGTAGAATCTGTTAAAACCAAGGAAGCAGCTGAACAGAGGTCATTCCAGAATCAAAGCTGGTTTTCATTTATGTGGCGTACACCTGCTGAAGATTCTGCCATTGTAGATGATTCCGAGGGATCACAGTTAGCAGAAGAAAGACTGACTAAAGAGGAATGGCAGGCAATCCATAAGTTGCTGAGTTATCAGCCAGAAGAAGCACATTCAGGAAAAGGCATGCAGAATATGATCCGGTTTTTGGTAACTGTGTCTGTTGATCAAGCAGCTGCTAGGATCATTGATATAAATCAAACGGAAGTTGTGTGTTGTAGATTTGAGCAACTTCAAATCTCAACCAAGTTTAAAAATCGAAGTACCTACTGTGATGTGTCCTTAAAATTCTATGGTTTATCTGCGCCTGAAGGCTCGCTTGCCCAGAGTGTCTGTAGCCAGCAGAAGGTGAATGCACTAGCTGCTAGCTTTGTACACTGTCCAGTTGGAGAGAATGTTGACTGGAGGCTGTCGGCTACAATTTCTCCCTGCCACGTCACGGTTTTGATGGAAAGCTTTCATCGATTTTTAGAATTTGTGAAAAGGAGTAATGCAGTTAGTCCTACTGTCACATTGGAAACTGCAACTGCTTTGCAGATGAAAATTGAGCAAGTGACTCGTAGAGCACAGGAGCAATTTCAAATGGTATTAGAAGAACAAAGCAGGTTTGCTCTTGATATCGACTTAGACGCTCCAAAAGTAAGGGTTCCTATCAGAACTTGTGGCTCTTCCAAATGTGATAGCCATTTTCTTTTGGATTTTGGTCATTTCACGCTGCACACCAAGGATAGTCAGCATGGTGAACAGAGGCAGAACTTATATTCTCGGTTTTTTATAACTGGAAGAGATATTGCTGCCTTTTTTGTGGATTGCGGTTCTGACTGCCAAAGTTGCACTTTGGATGTACCAGATTATGATTATCACCCGCTTTTATCTCCTACCCCTGACAATGTTGAGAATTGCTATTCTCTGATAGATAGGTGTGGAATGGCTGTACTTGTTGATCAGATCATAGTGCCCCATCCAAGTTACCCGTCAATGCGCATCTCAATTCAAGTGCCAAACCTTGGGATTCACTTTTCACCATCGAGATTCCAGAGGCTCATGAAATTGTTAAACATATTCTGTGGTACATTGGAAACTTGCAATGCCAGTCAGCCTGCTCTTGATGATTTTCAAGCAGAAACTCCATGGAGTTTGTCAGATCTTTCTACAGAAGCTAGAATTTTAGCATGGAGGGGGATTGGCAATTCTGTGGCTACCTGGCAACTATGTTATCTTGTGTTGTCTGGAATAAATCTTTATGTGCTGGAATCTGAAAAGTCACAGAGTCACCAGCGACACACAAGCATGGCTGGTCGACAAGTATATGAGGTTCCCCCAGCAAACATTGGTGGTTCACTGTTTTGTGTCGCTGTAAGTTACAGGGGAATGGACAATCAAAAGACTTTGGAGTCTCCTACTACCTTGATTATAGAGTTTCGGGCTGAGCATGAGAAGGACATTTGGTTGAAAGGGCTTATACAAGCTACATATCAAGCTTCTGCTCCTCCATCAGTTAATGTATTGGGAGAAACAAGCGATCCCGTTACTGACTATGGTGAAACCCAGACTATGAATTCAAAAACAGCTGACCTTGTTATTAATGGGGCACTGGTGGAGACAAAGATATTCATATATGGAAAGACTGGTGATAAAGTTGATGAAGAACGTTGCGAGACTCTTATTCTTGAGGTTCTTGCCAATGGTGGAAAGTTGCACATGATTCGCTGGGAAGGCGACCTGACACTTAAGATGAAACTGCACTCTTTAAAAATCAAAGATGAGCTTCAAGTTCGTCTATCAACAACCCCCCAGTATTTAGCTTGCTCCGTGCTAAACATCGACGATCTAGTTTCTTCTCCTGGCATAGTTGATCCACACATGAAAGAAATGTCTGCTTTGCTTCATGAGGATGATGATACTTTTACAGATGCTTTGCCAGATTTTATGTCTATCTCAGATACAGGCTTAGGTTCACAAATAATGGATATGGATACATGTGCAACCACTGAGGATGTCAATGATGATACTGGATTTGCAACTCCACAGGCCATAATTCATGAAAAAAAATTGGTTAAGGAAAAGGTCATTTCTGGTGAGATATTTTATGAGGCGGATGGCGGTGATAATTCAAATTTTGTTTCTGTTACCTTCTTGACTCGGAGTCCTAGCTCGCCTGATTATGATGGTATTGATACGCAGATGAATCTCCGCATGTCAAAATTGGAGTTCTTTTGCAACAGACCCACTCTTGTTGCTTTGATTGATTTTGGCCTGGATTTAAGCTGTGTGTATGACGTGGAAGGTAGCGCAGACATGACTAAGGTTCCAGATGATAAACCTTTGATGAACAAAGAAAAGAATGACGAAAGTGTCAAAGGGTTGCTGGGTTATGGTAAAGGTCGTGTAGTATTTTATTTAAACATGAATGTTGACAATGTGACTGTGTTTCTTAACAAAGAGGATGGCTCTTCATTTGCAATGTTTGTGCAAGAAAGTTTCCTGCTGGATCTTAAGGTCCACCCAAGTTCTCTTTCCATTGAAGGTACCCTAGGAAATTTTAGACTCCATGATATGTCTCTTGGAACAGATCACTGTTGGGCTTGGCTTTGTGATATACGTAATCCAGGTGTTGAATCCCTTATCAAGTTCAAATTTAACTCCTATAGTGCTGAAGATGATGACTATGAAGGATATGATTACAGTTTGTGTGGCCGACTTTCTGCTGTCCGCATCATTTTTCTCTATAGGTTTGTTCAGGAGATAACAGAATACTTTATGGAACTTGCCACCCCACATACCGAAGAGGCAATAAAACTTGTTGACAAAGTTGGAGGCTTTGAGTGGCTAATTCAGAAATATGAGATTGATGGAGCTACAGCGTTGAAGCTGGACCTGTCACTTGATACTCCAATAATCATTGTTCCCAGGAATTCAACAAGCAAAGATTTCATTCAACTTGATCTGGGCCAGCTAAAAGTCACAAATGAGTTTAGTTGGTATGGTTCCCCTGAGAAAGATCCTTCAGCTGTCCATATTGATGTCCTTCATGCTGAGATCCTGGGGATCAGCATGTCTGTAGGAATTGATGGTTGCTTAGGCAAATCAATGATACGAGAAGGCAAAGGACTTGATGTTTACGTGAGGAGAAGTTTGAGGGATGTCTTCAAAAAAGTTCCAACATTTGCTCTTGAAGTGAAGGTTGGCTTATTGCACGGTGTCATGTCTGACAAAGAATATAAAGTCATTCTGGACTGTGCATGCATGAACTTATGCGAAGAGCCAAAGCTTCCCCCTAGTTTCCGTGGTGGTAAATCTGGTTCGATGGATACAATGAGACTGCTGGCTGATAAGGTCAACATGAACAGTCAACTCCTACTATCAAAAACTGTTACCATAGTGGCAGTTGTAATTGATAATGCCCTATTGGAATTGTATAACGGCATTCATGCTGAGTCTCCTTTTGCTCAAATTGCTATCGAAGGTCTTTGGGTAATGTATCGGATGACTTCATTGTCAGAGACAGATCTCTACATAACCATTCCAAAATTTTCTGTTGTTGACATTCGCCCCAATACAAAACCTGAAATGCGCCTAATGCTTGGATCATCCGCTGATGATTCCAAACAAGTTTCTTCTGGAAGTTTGCCCCTTTCCTTAAATAAGGGGAGCTTTAGAAAAACAGACTCTGATGCTGGATTTTCTCATGTGGATTTACCAATATCAACAATGTTCTTGATGGACTATAGATGGCGCAAATCTTCCCAATCATTTGTGGTTAGGGTTCAGCAACCTCGAGTTCTTGTTGTAGCTGATTTCCTTCTGGCTGTGGGTGAGTTTTTTGTGCCTGCATTGCGAACTATAACTGGTAGAGAGGAAGTGATGGATCCTACAAATGATCTTATTGGTAAAAGCTGTAGCATAGTATTCTCTGGACCTATTTACAAACAGATAGAAGATGTGGTGCACTTGTCTCCAAGTAGACAGTTAGTGGCAGATTGTTTGCACATTGATGAATACATATATGATGGATGTGGAAAGACCATCCATTTGAGTGAGGAAACGGACACAAAATATCTTCATTCAACTAGGCCTCATCCCATTATTATAATTGGGTGTGGAAAGAAGTTGCGATTTATGAATGTCAAAATTGAGAATGGTTCTATTTTAAGGAAGTACACACATTTGAGTAATGATAGCAGCTACTCGCTATCTTTTGAGGATGGTGTGGACATCACGTTGCTGGACAGTTACTCATCTGATGAGGACAAGAAGAGTCTAGAAGACACTCATAAATCATCAGACACCTCAAATATTTCTTCGGATTCTGAAAGTGATCCAAATGTGATCCCTAGTTTCAGTTTTGAAGCACAGGTAGTTTCTCCTGAGTTTACCTTCTATGATTCTTCAAAGTCTTGTCTGGATGATTCATATGGTGAAAAGCTTCTCCGTGCAAAGTTGGATTTTAGCTTCATGTATGCATCCAAAGAAAATGATACCTGGGTTCGAGCCCTGGTGAAAGATCTTACAGTTGAGGCTGGTTCTGGTCTTATTGTTCTTGATCCAGTGGATATATCAGGGGGTTACACTTCTGTGAAGGACAAAACAAATATGTCTTTGTTATCAACTGATGTTTGCTTCCATCTTTCACTGAGTGTTGTTTCTCTTATACTTAATTTGCAAACCCAGGCAACATCAGCATTGCAATTCGGAAATTCTATGCCACTGGCTGGATGTACCAATTTTGATCGAATTTGGGTGTCCCCGAAAGAAAATGGTTCCTGTTACAACCTTACCTTTTGGAGGCCTCGAGCACCTTCAAATTATGTTATACTGGGAGATTGTGTGACATCAAGGCCAGTTCCTCCTTCACAGGCAGTAATGGCAGTGAGTAATGCATATGGGCGTGTGCGTCAACCAATTGGTTTTAATCTCATAGGCTTGTTCTCTACTATTCAAGGATTTGGTGGGGGGGATTCTGATGTTGGTAGTGATTGTTCTCTTTGGATGCCCGTAGCACCACCCGGATACATAGCATTGGGTTGTCTAGCAAATATAGGGAAAGAGCAGCCACCTAATCATATAGTTTATTGCCTACGTTCTGATCTTGTTACTTCAACAACATATTCAGAATGCTTATTTTCTTCTCCATCAAATCCTCATTTTGCATCTGGATTTAGCATCTGGCGCGTAGAGAATGTTCTTGGATCATTTCATGCCCATTCTTCTACCGAATGCCCTTCTGAAGACAATTGTTGTAACCTCAATCATCTTCTTCTTTGGAATTGGAATCGGCAACAATCTGGTCCTACAGAATCTGCCTCAAATTTGGCTGTTGACAATAAGTATGCAAGTCACCAAACCAGAAACCAGACTGGAAATTCTTCTCGATGGGATATAGTCAGATCAATTTCAAAGGCAAATAATTGTTTTATGTCGACCCCCAACTTTGAGAGAATCTGGTGGGACAAGGGTAGTGACCTCCGCCAACCAGTCTCAATATGGCGGCCCATCGCGCGTTGTGGCTATGCTATATTGGGTGATTGCATAACCGAAGGCTTAGAACCTCCAGCTGTGGGCATAATTTTTAAGGCTGATGATCCTGAAGTATCTGCGAAACCTGTACAATTTACTAAAGTTGCCCACATTGTAGGGAAAGGTTTCGATGAAGTATTCTTTTGGTACCCACTTGCTCCGCCTGGTTATGCATCTCTTGGATGCATAGTCTCCAGGACGGGTGAAGCCCCATGTGTTGATATAATTTGTTGCCCTAGGATAGATTTTGTTAACCAAGCTAATATTCTTGAGGCGCCAATTTCAAGATCTTTGACTTCAAAGGGATCTCAGTGCTGGAGCGTTTGGAGAGTTGAAAATCAGGCCTCCACTTTGCTTGCACGGGCTGATTTGAAAAAACCATCAAGCAGATTGGCTTATGCTATTGGTGATTCCTTGAAGCCAAAGACTAGGGAAAATATAACAGCAGAGGTGAAGCTGAGATGCTTCTCTTTAACTGTTCTAGACAGCTTATGTGGAATGATGAAACCACTATTTGACACAACAATCACCAATATCAAGCTTGCAACACATGGCCGACTGGAGGCTATGAATGCAGTACTGATTTCCTCTATTGCTGCATCAACATTCAATACTCAATTAGAAGCGTGGGAGCCACTTGTGGAGCCTTTCGATGGAATATTCAAGTTTGAAACTTATGATACTAATGTGCACTCGCCATCAAAATTTGGGAAGACAGTGCGTATTGCTGCCACCAGTATCCTTAATTTAAATGTCAGTGCTGCAAACCTTGAAACTTTTATTGGGAGTGTTCTTTCGTGGAAAAGACAATTAGAACTTGAACAGAAAGCAATGAAGATAAATGAGGAAGCTGGTGGTCTATGTGGACAAGGAGAGGACCAGACTCTCTTTGCGTTGGATGAAGATGACTTTCAGACTGTAATTGTAGAGAATAAACTTGGGTGTGAGACATATGTGAAAAGAGTTGAGGAAAACTCAGACAGAGTGGACCGGTTACATCATGGTGACTACATTTCCATATGGGTGCCGCCTCCAAGGTTTTCTGATAGGTTCAATGTTGTAGATGAATCTAAGGAAGCACGTTATTATGTTGCTATACAGATACACAAAGCCAAGGATTTACCTATTATAGATGATGGTAACAGCCATAATTTCTTCTGTGCCTTGCGCCTTGTTGTTGATAGTCAAGCAACAGATCAACAAAAACTTTTTCCTCAAAGTGCAAGGACAAAATGTGTTAAGCCTGCAGTTTCAGAATTCAATAACTTGAATGAAGGCACCGCGGAATGGAATGAACTTTTCATATTTGAAGTTCCCCGGAAGGGCCCAGCTAAAGTGGAAGTGGAGCTGACAAACCTTGCAGCAAAAGCAGGAAAGGGGGAAGTTGTGGGTGCACTCTCATTTTCTGTTGGGCAAGGTGCAAATGTGTTGAGGAAAATGGCTTCAGTTAGGGTGTTTCATCAAGGTCATGATGTTCAGAACGTAGTATCACATCCACTAAGGGGCAGGGTTCGACATAACAGTACCGAAGACATGGATGAATGTGGATGCCTGCTGGTTTCAACTTCTTATTTCGAGAGGAAAACAACTCCAAGTTTTCAAAGGGATCTGGAGGCTGAAAATGTAACCGATAGAGACATAGGTTTCTCTGTTGGACTTGGCCCGGATGGTGTTTGGCAGAACATTCGGTCACTGCTTCCATTGTCAGTTGTCCCAAAATGGTTACAGAATGATTTCATGGCGTTGGAAGTTGTTGTGAAAAATGGCAAGAAGCATGCAATATTCAGGGGTCTTGCAACAGTTGTAAATGAGACTGATGTTAAGTTGAAAATTTCAGTCTGTCATGCATCTCGAATTCAAGGTCGTGATTCCTCTCTAAGAAGAAGTGATAGCATAAATCCTGGGAGTTCTTTTATTTTGCCTTGGAGAAGTACATCTAGTGATTCTGACCAGTGCTTACAAATATGTCCTTCCGTTGATCATCCTCAGCCTCCATATTCATGGGGTTCTCTCGCGGCAGTGGGTACTGGTTATACATATGGAAAGGACCTGACTATTATAGATCAGGTTTCACTTTCTAGACAATATACTTCAAAGCAGGAAAATAATTTGCAAAATGTTACTTTCAAGTTGAATCAGCTTGAGAAGAAGGATATACTTTTGTGTTGTACTAGTACCATAAACAAACAGTTTTGGCTTAGTGTCGGGGCGGATGCCTCGGCGCTTCATACTGAACTGAATGCACCTGTTTATGACTGGAAAATATCTGTCCATTCTCCTATGAAGTTGGAAAATCGCCTTTCCTGTCCAGCTGAATTCACAATCTGGGAAAGAACAAGAGATGGAAAATGCGTTGAACGACAGCATGGTATGATCTCTTCACGTGGGGGTGTACATATATATTCAGCGGACATTCAGAAACCTTTGTATCTAACGTTGTTTGTCGAGGGTGGTTGGGTCCTGGAGAAGGACCCCGTTCTTCTTTTGAATCTTTATTCCAATGACCATGTCTCGTCATTCTGGATGGTTCACCAGAAAAGTAAAAGGAGACTGCGCGTGAGTATTGAACGTGAGATGGGAGGAACCACTGTTGCACCCAAAACAATAAAATTTTTTGTTCCCTACTGGATTACTAATGATTCATCTATTTCTTTGGCATATCGAGTGGTAGAAGTAGAACCTTCAGACAATGCAGATACGGACTCTCTAATGCTTTCCAGGGCAGTCAAGTCTGCAACACCAGCCTTGAGAAGTCCCACAAACTCTAGGGACAGGAAGCATTCTGCCACAAGGAGAAACATTCAAGTACTTGAAGTTATTGAGGACACTAGTCCTGTTCCTAACATGCTTTCTCCACAAGATTATGCTAGCCGTAGTGGGGCTTCGCTGTTTCCATCTCAAAAAGATGTGTATTTGTCCTCACGAGTGGGGCTTTCTGTTGCCATGCATCATTCAGAAATTTACAGTCCTGGGATATCCCTTTTTGAACTGGAAAAGAAGGAAAGGCTTGATGTAAAAGTCTTCAGTTCAGATGGATCTTATTACAAGCTTTCAGCGAGACTGAGCATGACCTCAGACAGAACAAAGGTTGTCCACTTCCAGCCCCACACCTTGTTTATTAATAGAGTTGGTTACAGACTCTGCCTGCAACAGTGTGATTCTCAGTCCGTGGCATGGATTCATCCCACGGACTCTCCAAAGCCCTTTTATTGGCATTCTAGTGCCAAAGTCGAATTGTTGAAGGTGCGGGTGGATGATTACAAATGGAGTGCACCATTTAGTGTTTCTAGTGAAGGTGTCATGCGTGTTTGCTTGAAGAAGGATGACGGAAATGATCAACTTCAATTTCGAATAGCTGTAAGAAGTGGAGCTAAGAACTCAAGCTATGAAGTTGTTTTCCGTCCAAACTCTTCCATTAGTCCTTACAGGATTGAAAACCGTTCCATGTTTTTACCCATCCGAATTCGGCAAGTGGACGGTACCAACGATTCATGGAAAGTTCTTCTTCCCAATACAGCAGCTTCCTTTTTATGGGAAGATCTTGGCAGAAGACGTTTATTAGAGATCCTGGTTGAGGGAGAAGACCCATTAAAATCAGGAAAGTATGATATTGATGAGATTTCTGATCACCAACCCATTCATCTGGGAAATGTGCCTTCTAAAGCTTTACGTGTTACTGTAATAAAAGAAGAGAAAGTGAATGTCATCAAGATCAGTGACTGGATGCCAGAAATTGATCCTTCTGGAATCTTGAGTACAAGCCACACATCGCCTCTGTCTCAGCTTTCTATACAGCAACAATCACCGGTGATCGCTGATTGTGAGTTTCATGTTATCATTGAGCTTGCTGAGCTTGGGATATCCATTATTGACCATACACCCGAAGAAATCTTGTACCTTTCGGTCCAGAATCTTGTGTGTGCATATTCAACTGGCTTAGGTTCAGGAATCAGTAGGTTCAAACTTAGAATGCGGGGGATACAATTGGATAACCAGTTGCCCCTTAGTCCAACTCCAGTTCTTTTTAGACCTCAGAAAGTTGGAGATGATACTGACTATATCTTGAAAGTTTCAATCACAATGCAATCAAATGGGTCACTAGATCTATGTGTCTATCCATATATCGGTCTCCAGGGACCTGAAAACTCTGCCTTTTTGGTAAACATTCATGAGCCAATCATTTGGCGCCTTCATGAGATGATTCAGCAGGTCAACCTCAGTCGGTTGTCTGATACTCAAACAACTGCTGTTTCTGTTGATCCGATTATTGAAATTGGAGTTCTTAGCATTTCAGAGGTTCGATTCAAAGTGTCAATGGCTATGTCACCTAGTCAGCGGCCAAGAGGTGTCCTTGGCTTTTGGGCATCCTTGATGACTGCATTGGGGAACACTGAGAATATGCCAGTGAGGATATACCAAAAGTTTAATGAGAACGTGTGCATGAGGCAGAGTTCAATGATTAGTATTGCTATTTCAAACGCTCAAAAGGATCTTTTAGGCCAACCTCTTCAACTGCTATCTGGTGTTGACATATTGGGCAATGCAAGCAGTGCCCTTGGACATATGAGCAAGGGCATGGCTGCCTTATCATTTGATAAGAAGTTCATTCAAAGCCGACAGCGAAAGGAAAGCAAGGGTGTAGAGGACTTTGGTGATGTTCTCAGAGAGGGAGGTGGAGCATTGGCAAAAGGCCTCTTTAGAGGAGTTACTGGCATATTGACAAAGCCGCTTGAAGGTGCAAAAAATTCTGGTGTTGAGGGTTTTGTCCAAGGTGTTGGGAAAGGATTAATAGGTGCAGCTGCACAACCAGTGAGCGGGGTTCTAGATCTTCTGTCAAAAACTACTGAGGGTGCCAATGCGATGAGAATGAAGATAGCATCAGCAATAACTTCTGATGAGCAACTCCTCCGCAAAAGGCTGCCTCGTGTAATCGGTGGTGATAATTTGATTCGACCATATGATGGGTACAAAGCACAGGGACAGGCTATATTGCAGCTGGCGGAATCAGGCTCATTTTTCCTCCAGGTTGATCTGTTTAAAGTACGTGGGAAGTTTGCTCTATCAGATGCTTATGAAGATCACTCTTTACTACGCAAAGGAAAAATTCTTCTAGTCACTCATCGAAGAGTGATACTGTTGCAACAACCCTTCAATGTAGCTCAGAAGAAGTTCAACCCTGCTAGGGATCCGTGTTCTGTATTGTGGGATGTACTTTGGGATGACCTGGTGATAATGGAAAAGTCGTACGGGAAAAAGGACCATCCAAAATCTCCACCTTCACGGGTCATTCTTTATTTACAAGATAAATCAGAGATGAAGGAACAGGTTCGTATCATAAAGTGCCTCCGTGATACCCCCCAAGCACTTGACGTGTACTCATCAATTGAACGAGCAATGAACACTTATGGACCAAACAAACCAAAGCAAATGCTGAAAAAGAGTATGACATTGCCATATGCACCATTTGTCGATAACGCCAGTGCTGAAGCTACATCAAAAGAACCAGGGTCACCCCGACAGGTGCCGGCATCTATTCCTCGTAGTTCAACTTTTGGCAGCCGCTTCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Chorein_N Pex24p SHR-BD VPS13 VPS13_C VPS13_mid_rpt Vps62

Protein Analysis

4136

Amino Acids

461.56

Weight (kDa)

5.95

Isoelectric Point (pI)

41.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 1 - 691 8.2e-102 VPS13-like family N-terminal region
VPS13_M PF25033 1339 - 1532 3.4e-06 VPS13-like family middle region
Vps62 PF06101 1995 - 2165 7.2e-11 Vacuolar protein sorting-associated protein 62
Vps62 PF06101 2250 - 2389 1.2e-07 Vacuolar protein sorting-associated protein 62
VPS13_VAB PF25036 2866 - 3436 9.2e-25 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3918 - 4023 1.6e-11 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2096, 5411
AarI CACCTGC 1 cut(s) 1321
AasI GACNNNNNNGTC 3 cut(s) 2713, 3674, 4816
Acc16I TGCGCA 1 cut(s) 2303
Acc36I ACCTGC 4 cut(s) 751, 1321, 1914, 11035
Acc65I GGTACC 4 cut(s) 185, 3848, 6984, 10316
AccB7I CCANNNNNTGG 4 cut(s) 401, 2327, 6032, 11798
AccBSI CCGCTC 1 cut(s) 11652
AccI GTMKAC 3 cut(s) 2620, 5284, 6740
AccII CGCG 6 cut(s) 6492, 6818, 6820, 8120, 8852, 9393
AclI AACGTT 2 cut(s) 2971, 9272
AcoI YGGCCR 4 cut(s) 283, 4015, 7390, 11174
AcvI CACGTG 1 cut(s) 9221
AcyI GRCGYC 2 cut(s) 7112, 11023
AdeI CACNNNGTG 1 cut(s) 5957
AflII CTTAAG 2 cut(s) 3050, 3815
AflIII ACRYGT 5 cut(s) 472, 3299, 10507, 11271, 12207
AgeI ACCGGT 2 cut(s) 7827, 10642
AhdI GACNNNNNGTC 1 cut(s) 3465
AhlI ACTAGT 2 cut(s) 9008, 9665
AjiI CACGTC 3 cut(s) 1756, 3601, 12208
AjuI GAANNNNNNNTTGG 8 cut(s) 3820, 3852, 4488, 4520, 7086, 7118, 7602, 7634
AleI CACNNNNGTG 1 cut(s) 5894
Alw21I GWGCWC 7 cut(s) 598, 1888, 5271, 6118, 7530, 8233, 10111
Alw44I GTGCAC 5 cut(s) 594, 5267, 7526, 8229, 10107
AlwNI CAGNNNCTG 6 cut(s) 90, 164, 4991, 6620, 9978, 10557
Ama87I CYCGRG 2 cut(s) 5097, 6111
ApaI GGGCCC 1 cut(s) 8165
ApaLI GTGCAC 5 cut(s) 594, 5267, 7526, 8229, 10107
ArsI GACNNNNNNTTYG 8 cut(s) 216, 248, 498, 530, 5335, 5367, 8683, 8715
AseI ATTAAT 3 cut(s) 2904, 9957, 11624
AsiGI ACCGGT 2 cut(s) 7827, 10642
Asp700I GAANNNNTTC 9 cut(s) 711, 829, 1776, 5745, 6685, 6962, 8570, 12005, 12162
Asp718I GGTACC 4 cut(s) 185, 3848, 6984, 10316
AspA2I CCTAGG 2 cut(s) 3853, 7073
AsuC2I CCSGG 3 cut(s) 6327, 8155, 8501
AsuII TTCGAA 3 cut(s) 6, 31, 10186
AsuNHI GCTAGC 2 cut(s) 1685, 9704
AvaI CYCGRG 2 cut(s) 5097, 6111
AvrII CCTAGG 2 cut(s) 3853, 7073
AxyI CCTNAGG 1 cut(s) 702
BaeGI GKGCMC 9 cut(s) 598, 2280, 2914, 5271, 7530, 8165, 8233, 10111, 11392
BaeI ACNNNNGTAYC 6 cut(s) 5790, 5823, 7509, 7542, 9248, 9281
BalI TGGCCA 1 cut(s) 285
BamHI GGATCC 3 cut(s) 1186, 5188, 12022
BanII GRGCYC 2 cut(s) 5815, 8165
BarI GAAGNNNNNNTAC 4 cut(s) 9199, 9231, 9703, 9735
BauI CACGAG 3 cut(s) 860, 9759, 11760
BbrPI CACGTG 1 cut(s) 9221
BbsI GAAGAC 8 cut(s) 4459, 5592, 6555, 7556, 8373, 9850, 10393, 10425
Bbv12I GWGCWC 7 cut(s) 598, 1888, 5271, 6118, 7530, 8233, 10111
BbvCI CCTCAGC 1 cut(s) 8823
BceAI ACGGC 3 cut(s) 1086, 4759, 9693
BcgI CGANNNNNNTGC 8 cut(s) 11, 45, 1859, 1893, 3008, 3042, 8504, 8538
BciVI GTATCC 5 cut(s) 3289, 4624, 6323, 7586, 10809
BclI TGATCA 5 cut(s) 1486, 2263, 8815, 10171, 10462
BcnI CCSGG 3 cut(s) 6327, 8155, 8501
BcuI ACTAGT 2 cut(s) 9008, 9665
BfoI RGCGCY 3 cut(s) 7115, 9062, 11026
BfrI CTTAAG 2 cut(s) 3050, 3815
BfuAI ACCTGC 4 cut(s) 751, 1321, 1914, 11035
BfuI GTATCC 5 cut(s) 3289, 4624, 6323, 7586, 10809
BglI GCCNNNNNGGC 1 cut(s) 542
BlnI CCTAGG 2 cut(s) 3853, 7073
BlpI GCTNAGC 2 cut(s) 2748, 10686
BmcAI AGTACT 2 cut(s) 7416, 9645
BmeRI GACNNNNNGTC 1 cut(s) 3465
BmeT110I CYCGRG 2 cut(s) 5097, 6111
BmgBI CACGTC 3 cut(s) 1756, 3601, 12208
BmrI ACTGGG 2 cut(s) 3109, 6146
BmtI GCTAGC 2 cut(s) 1689, 9708
BmuI ACTGGG 2 cut(s) 3109, 6146
BoxI GACNNNNGTC 1 cut(s) 9666
BpiI GAAGAC 8 cut(s) 4459, 5592, 6555, 7556, 8373, 9850, 10393, 10425
BplI GAGNNNNNCTC 4 cut(s) 3755, 3787, 7796, 7828
Bpu10I CCTNAGC 4 cut(s) 3271, 4399, 8823, 10774
Bpu1102I GCTNAGC 2 cut(s) 2748, 10686
Bpu14I TTCGAA 3 cut(s) 6, 31, 10186
BpuEI CTTGAG 8 cut(s) 278, 647, 3011, 7127, 8999, 9604, 10201, 10609
BpuMI CCSGG 3 cut(s) 6327, 8155, 8501
Bsa29I ATCGAT 1 cut(s) 1783
BsaAI YACGTR 5 cut(s) 3923, 4444, 9221, 10508, 11882
BsaBI GATNNNNATC 3 cut(s) 716, 1185, 1515
BsaHI GRCGYC 2 cut(s) 7112, 11023
BsaI GGTCTC 2 cut(s) 964, 10970
BsaWI WCCGGW 3 cut(s) 1461, 7827, 10642
BsaXI ACNNNNNCTCC 8 cut(s) 1701, 1729, 1731, 1759, 6132, 6162, 10015, 10045
Bse118I RCCGGY 4 cut(s) 1121, 7827, 10642, 12361
Bse21I CCTNAGG 1 cut(s) 702
Bse8I GATNNNNATC 3 cut(s) 716, 1185, 1515
BseCI ATCGAT 1 cut(s) 1783
BseJI GATNNNNATC 3 cut(s) 716, 1185, 1515
BseRI GAGGAG 4 cut(s) 2799, 4462, 11553, 11732
BseSI GKGCMC 9 cut(s) 598, 2280, 2914, 5271, 7530, 8165, 8233, 10111, 11392
BseYI CCCAGC 4 cut(s) 2641, 3030, 3688, 8164
BsgI GTGCAG 4 cut(s) 2021, 3047, 11622, 11652
Bsh1236I CGCG 6 cut(s) 6492, 6818, 6820, 8120, 8852, 9393
BshTI ACCGGT 2 cut(s) 7827, 10642
BshVI ATCGAT 1 cut(s) 1783
BsiHKAI GWGCWC 7 cut(s) 598, 1888, 5271, 6118, 7530, 8233, 10111
BsiHKCI CYCGRG 2 cut(s) 5097, 6111
BsiSI CCGG 8 cut(s) 1122, 1462, 6327, 7828, 8155, 8501, 10643, 12362
BsiWI CGTACG 1 cut(s) 12081
BslFI GGGAC 8 cut(s) 1082, 6049, 6782, 8534, 9576, 9620, 10986, 11829
BsmFI GGGAC 8 cut(s) 1082, 6049, 6782, 8534, 9576, 9620, 10986, 11829
Bso31I GGTCTC 2 cut(s) 964, 10970
BsoBI CYCGRG 2 cut(s) 5097, 6111
Bsp119I TTCGAA 3 cut(s) 6, 31, 10186
Bsp120I GGGCCC 1 cut(s) 8161
Bsp1407I TGTACA 4 cut(s) 469, 1693, 6925, 9229
Bsp1720I GCTNAGC 2 cut(s) 2748, 10686
Bsp19I CCATGG 2 cut(s) 55, 2450
BspDI ATCGAT 1 cut(s) 1783
BspFNI CGCG 6 cut(s) 6492, 6818, 6820, 8120, 8852, 9393
BspHI TCATGA 7 cut(s) 646, 2364, 3208, 3361, 8305, 11005, 11029
BspMAI CTGCAG 2 cut(s) 1038, 8086
BspMI ACCTGC 4 cut(s) 751, 1321, 1914, 11035
BspOI GCTAGC 2 cut(s) 1689, 9708
BspQI GCTCTTC 3 cut(s) 1993, 3778, 4575
BspT104I TTCGAA 3 cut(s) 6, 31, 10186
BspTI CTTAAG 2 cut(s) 3050, 3815
BspTNI GGTCTC 2 cut(s) 964, 10970
BsrBI CCGCTC 1 cut(s) 11652
BsrFI RCCGGY 4 cut(s) 1121, 7827, 10642, 12361
BsrGI TGTACA 4 cut(s) 469, 1693, 6925, 9229
BssAI RCCGGY 4 cut(s) 1121, 7827, 10642, 12361
BssNI GRCGYC 2 cut(s) 7112, 11023
BssSI CACGAG 3 cut(s) 860, 9759, 11760
Bst2BI CACGAG 3 cut(s) 860, 9759, 11760
BstACI GRCGYC 2 cut(s) 7112, 11023
BstAFI CTTAAG 2 cut(s) 3050, 3815
BstAPI GCANNNNNTGC 2 cut(s) 1682, 11387
BstAUI TGTACA 4 cut(s) 469, 1693, 6925, 9229
BstBAI YACGTR 5 cut(s) 3923, 4444, 9221, 10508, 11882
BstBI TTCGAA 3 cut(s) 6, 31, 10186
BstDSI CCRYGG 6 cut(s) 55, 2450, 4606, 8118, 10005, 10023
BstEII GGTNACC 1 cut(s) 12345
BstENI CCTNNNNNAGG 3 cut(s) 6103, 9302, 10409
BstFNI CGCG 6 cut(s) 6492, 6818, 6820, 8120, 8852, 9393
BstH2I RGCGCY 3 cut(s) 7115, 9062, 11026
BstNSI RCATGY 9 cut(s) 476, 1226, 1450, 3303, 3520, 4378, 4566, 8615, 9685
BstPAI GACNNNNGTC 1 cut(s) 9666
BstPI GGTNACC 1 cut(s) 12345
BstSLI GKGCMC 9 cut(s) 598, 2280, 2914, 5271, 7530, 8165, 8233, 10111, 11392
BstSNI TACGTA 1 cut(s) 3923
BstUI CGCG 6 cut(s) 6492, 6818, 6820, 8120, 8852, 9393
BstV2I GAAGAC 8 cut(s) 4459, 5592, 6555, 7556, 8373, 9850, 10393, 10425
BstXI CCANNNNNNTGG 4 cut(s) 8838, 10480, 11019, 11612
Bsu15I ATCGAT 1 cut(s) 1783
Bsu36I CCTNAGG 1 cut(s) 702
BsuI GTATCC 5 cut(s) 3289, 4624, 6323, 7586, 10809
BsuTUI ATCGAT 1 cut(s) 1783
BtgI CCRYGG 6 cut(s) 55, 2450, 4606, 8118, 10005, 10023
BtgZI GCGATG 3 cut(s) 6799, 10590, 11711
BtrI CACGTC 3 cut(s) 1756, 3601, 12208
BtsI GCAGTG 5 cut(s) 1127, 6195, 8528, 8862, 11392
BveI ACCTGC 4 cut(s) 751, 1321, 1914, 11035
CaiI CAGNNNCTG 6 cut(s) 90, 164, 4991, 6620, 9978, 10557
CciI TCATGA 7 cut(s) 646, 2364, 3208, 3361, 8305, 11005, 11029
Cfr10I RCCGGY 4 cut(s) 1121, 7827, 10642, 12361
Cfr42I CCGCGG 1 cut(s) 8121
ClaI ATCGAT 1 cut(s) 1783
CseI GACGC 2 cut(s) 1958, 6203
CsiI ACCWGGT 1 cut(s) 12060
CspAI ACCGGT 2 cut(s) 7827, 10642
CspCI CAANNNNNGTGG 4 cut(s) 3538, 3573, 7174, 7209
DinI GGCGCC 2 cut(s) 7113, 11024
DraI TTTAAA 6 cut(s) 795, 1573, 3072, 3723, 7587, 11875
DraIII CACNNNGTG 1 cut(s) 5957
DrdI GACNNNNNNGTC 3 cut(s) 2713, 3674, 4816
DriI GACNNNNNGTC 1 cut(s) 3465
DseDI GACNNNNNNGTC 3 cut(s) 2713, 3674, 4816
EaeI YGGCCR 4 cut(s) 283, 4015, 7390, 11174
Eam1105I GACNNNNNGTC 1 cut(s) 3465
EciI GGCGGA 5 cut(s) 3431, 6776, 6987, 9062, 11852
Eco105I TACGTA 1 cut(s) 3923
Eco147I AGGCCT 5 cut(s) 137, 5395, 6109, 7181, 11529
Eco24I GRGCYC 2 cut(s) 5815, 8165
Eco31I GGTCTC 2 cut(s) 964, 10970
Eco32I GATATC 4 cut(s) 456, 1939, 9813, 10698
Eco72I CACGTG 1 cut(s) 9221
Eco81I CCTNAGG 1 cut(s) 702
Eco88I CYCGRG 2 cut(s) 5097, 6111
Eco91I GGTNACC 1 cut(s) 12345
EcoNI CCTNNNNNAGG 3 cut(s) 6103, 9302, 10409
EcoO109I RGGNCCY 5 cut(s) 8161, 8884, 9295, 9307, 10973
EcoO65I GGTNACC 1 cut(s) 12345
EcoRI GAATTC 7 cut(s) 406, 2878, 4234, 8093, 8691, 9152, 10299
EcoRV GATATC 4 cut(s) 456, 1939, 9813, 10698
EcoT22I ATGCAT 7 cut(s) 4568, 5785, 6202, 7012, 7025, 8686, 9786
EcoT38I GRGCYC 2 cut(s) 5815, 8165
EgeI GGCGCC 2 cut(s) 7113, 11024
EheI GGCGCC 2 cut(s) 7113, 11024
FaqI GGGAC 8 cut(s) 1082, 6049, 6782, 8534, 9576, 9620, 10986, 11829
FauI CCCGC 4 cut(s) 2193, 10077, 10803, 11645
FauNDI CATATG 8 cut(s) 5734, 6202, 7789, 7856, 8875, 11400, 11794, 12292
FbaI TGATCA 5 cut(s) 1486, 2263, 8815, 10171, 10462
FblI GTMKAC 3 cut(s) 2620, 5284, 6740
FriOI GRGCYC 2 cut(s) 5815, 8165
FspAI RTGCGCAY 1 cut(s) 2303
FspI TGCGCA 1 cut(s) 2303
GsaI CCCAGC 4 cut(s) 2645, 3034, 3692, 8168
HaeII RGCGCY 3 cut(s) 7115, 9062, 11026
HapII CCGG 8 cut(s) 1122, 1462, 6327, 7828, 8155, 8501, 10643, 12362
HgaI GACGC 2 cut(s) 1958, 6203
Hin1I GRCGYC 2 cut(s) 7112, 11023
HindIII AAGCTT 8 cut(s) 72, 1774, 2799, 4589, 5744, 7376, 9884, 10500
HpaI GTTAAC 1 cut(s) 7090
HpaII CCGG 8 cut(s) 1122, 1462, 6327, 7828, 8155, 8501, 10643, 12362
Hpy99I CGWCG 2 cut(s) 1101, 3149
Hsp92I GRCGYC 2 cut(s) 7112, 11023
KasI GGCGCC 2 cut(s) 7111, 11022
KpnI GGTACC 4 cut(s) 189, 3852, 6988, 10320
KroI GCCGGC 1 cut(s) 12361
KroNI GCCGGC 1 cut(s) 12363
Ksp22I TGATCA 5 cut(s) 1486, 2263, 8815, 10171, 10462
KspAI GTTAAC 1 cut(s) 7090
KspI CCGCGG 1 cut(s) 8121
LguI GCTCTTC 3 cut(s) 1993, 3778, 4575
MabI ACCWGGT 1 cut(s) 12060
MbiI CCGCTC 1 cut(s) 11652
MfeI CAATTG 4 cut(s) 6222, 6553, 10820, 12219
MlsI TGGCCA 1 cut(s) 285
MluNI TGGCCA 1 cut(s) 285
Mly113I GGCGCC 2 cut(s) 7112, 11023
Mox20I TGGCCA 1 cut(s) 285
Mph1103I ATGCAT 7 cut(s) 4568, 5785, 6202, 7012, 7025, 8686, 9786
MroNI GCCGGC 1 cut(s) 12361
MroXI GAANNNNTTC 9 cut(s) 711, 829, 1776, 5745, 6685, 6962, 8570, 12005, 12162
MscI TGGCCA 1 cut(s) 285
Msp20I TGGCCA 1 cut(s) 285
MspCI CTTAAG 2 cut(s) 3050, 3815
MspI CCGG 8 cut(s) 1122, 1462, 6327, 7828, 8155, 8501, 10643, 12362
MunI CAATTG 4 cut(s) 6222, 6553, 10820, 12219
MvnI CGCG 6 cut(s) 6492, 6818, 6820, 8120, 8852, 9393
NaeI GCCGGC 1 cut(s) 12363
NarI GGCGCC 2 cut(s) 7112, 11023
NciI CCSGG 3 cut(s) 6327, 8155, 8501
NcoI CCATGG 2 cut(s) 55, 2450
NdeI CATATG 8 cut(s) 5734, 6202, 7789, 7856, 8875, 11400, 11794, 12292
NgoMIV GCCGGC 1 cut(s) 12361
NheI GCTAGC 2 cut(s) 1685, 9704
NmeAIII GCCGAG 1 cut(s) 9035
NsbI TGCGCA 1 cut(s) 2303
NsiI ATGCAT 7 cut(s) 4568, 5785, 6202, 7012, 7025, 8686, 9786
NspI RCATGY 9 cut(s) 476, 1226, 1450, 3303, 3520, 4378, 4566, 8615, 9685
NspV TTCGAA 3 cut(s) 6, 31, 10186
OliI CACNNNNGTG 1 cut(s) 5894
PaeI GCATGC 3 cut(s) 1450, 4566, 8615
PaeR7I CTCGAG 2 cut(s) 5097, 6111
PagI TCATGA 7 cut(s) 646, 2364, 3208, 3361, 8305, 11005, 11029
PaqCI CACCTGC 1 cut(s) 1321
PceI AGGCCT 5 cut(s) 137, 5395, 6109, 7181, 11529
PciI ACATGT 2 cut(s) 472, 3299
PciSI GCTCTTC 3 cut(s) 1993, 3778, 4575
PcsI WCGNNNNNNNCGW 2 cut(s) 12, 10320
PdiI GCCGGC 1 cut(s) 12363
PdmI GAANNNNTTC 9 cut(s) 711, 829, 1776, 5745, 6685, 6962, 8570, 12005, 12162
Pfl23II CGTACG 1 cut(s) 12081
PflFI GACNNNGTC 1 cut(s) 9344
PflMI CCANNNNNTGG 4 cut(s) 401, 2327, 6032, 11798
PfoI TCCNGGA 3 cut(s) 502, 7031, 9297
PinAI ACCGGT 2 cut(s) 7827, 10642
PluTI GGCGCC 2 cut(s) 7115, 11026
PmaCI CACGTG 1 cut(s) 9221
PmlI CACGTG 1 cut(s) 9221
Ppu21I YACGTR 5 cut(s) 3923, 4444, 9221, 10508, 11882
PpuMI RGGWCCY 4 cut(s) 8884, 9295, 9307, 10973
PscI ACATGT 2 cut(s) 472, 3299
PshAI GACNNNNGTC 1 cut(s) 9666
PshBI ATTAAT 3 cut(s) 2904, 9957, 11624
PsiI TTATAA 2 cut(s) 2096, 5411
Psp1406I AACGTT 2 cut(s) 2971, 9272
Psp5II RGGWCCY 4 cut(s) 8884, 9295, 9307, 10973
PspCI CACGTG 1 cut(s) 9221
PspEI GGTNACC 1 cut(s) 12345
PspFI CCCAGC 4 cut(s) 2641, 3030, 3688, 8164
PspLI CGTACG 1 cut(s) 12081
PspOMI GGGCCC 1 cut(s) 8161
PspPPI RGGWCCY 4 cut(s) 8884, 9295, 9307, 10973
PspXI VCTCGAGB 2 cut(s) 5097, 6111
PsrI GAACNNNNNNTAC 8 cut(s) 2619, 2651, 4606, 4638, 6283, 6315, 6486, 6518
PstI CTGCAG 2 cut(s) 1038, 8086
PstNI CAGNNNCTG 6 cut(s) 90, 164, 4991, 6620, 9978, 10557
PsyI GACNNNGTC 1 cut(s) 9344
PvuII CAGCTG 8 cut(s) 1259, 1496, 2891, 4331, 6875, 9149, 11636, 11833
SacII CCGCGG 1 cut(s) 8121
SalI GTCGAC 2 cut(s) 2619, 6739
SapI GCTCTTC 3 cut(s) 1993, 3778, 4575
ScaI AGTACT 2 cut(s) 7416, 9645
SexAI ACCWGGT 1 cut(s) 12060
SfoI GGCGCC 2 cut(s) 7113, 11024
Sfr274I CTCGAG 2 cut(s) 5097, 6111
Sfr303I CCGCGG 1 cut(s) 8121
SfuI TTCGAA 3 cut(s) 6, 31, 10186
SgrAI CRCCGGYG 1 cut(s) 10642
SgrBI CCGCGG 1 cut(s) 8121
SlaI CTCGAG 2 cut(s) 5097, 6111
SmiI ATTTAAAT 1 cut(s) 7587
SnaBI TACGTA 1 cut(s) 3923
SpeI ACTAGT 2 cut(s) 9008, 9665
SphI GCATGC 3 cut(s) 1450, 4566, 8615
SseBI AGGCCT 5 cut(s) 137, 5395, 6109, 7181, 11529
SspDI GGCGCC 2 cut(s) 7111, 11022
SspI AATATT 5 cut(s) 902, 5617, 7102, 7497, 8619
StuI AGGCCT 5 cut(s) 137, 5395, 6109, 7181, 11529
SwaI ATTTAAAT 1 cut(s) 7587
TaqII GACCGA 3 cut(s) 8514, 10729, 10952
TauI GCSGC 6 cut(s) 6811, 7867, 8855, 11176, 11566, 12399
Tth111I GACNNNGTC 1 cut(s) 9344
Van91I CCANNNNNTGG 4 cut(s) 401, 2327, 6032, 11798
Vha464I CTTAAG 2 cut(s) 3050, 3815
VneI GTGCAC 5 cut(s) 594, 5267, 7526, 8229, 10107
VspI ATTAAT 3 cut(s) 2904, 9957, 11624
XagI CCTNNNNNAGG 3 cut(s) 6103, 9302, 10409
XbaI TCTAGA 4 cut(s) 5581, 7318, 8915, 11659
XceI RCATGY 9 cut(s) 476, 1226, 1450, 3303, 3520, 4378, 4566, 8615, 9685
XcmI CCANNNNNNNNNTGG 1 cut(s) 6801
XhoI CTCGAG 2 cut(s) 5097, 6111
XmaJI CCTAGG 2 cut(s) 3853, 7073
XmiI GTMKAC 3 cut(s) 2620, 5284, 6740
XmnI GAANNNNTTC 9 cut(s) 711, 829, 1776, 5745, 6685, 6962, 8570, 12005, 12162
ZrmI AGTACT 2 cut(s) 7416, 9645
Zsp2I ATGCAT 7 cut(s) 4568, 5785, 6202, 7012, 7025, 8686, 9786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.