MD16G1145300.v1.1

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0002758
Physical Location & Seq
Forward (+)
11266518 .. 11311428
44911 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1145300.v1.1.491

Sequence Viewer

Length: 12000 bp
ATGAAGCACACGGAAGGTGTTCTGCATTTGCTTCGAAGATATTTGGGCAAATATGTCCACGGACTCTCAGTTAAAGCGTTAAGAATCAGTGTCTGGAAAGGTGATGTTGTTCTCAAAGATTTGAAGTTGAAGGCAGAGGCCTTAAATTCACTGAAACTTCCAGTCACTGTGAAAGCTGGTTTTATTGGTACCATTACATTAAAGGTTCCCTGGAAAAGTTTAGGCAAAGAACCTGTCATTGTTCTCATTGACCGTGTATTCATTCTTGCTTATCCACTTACTGATGGTCAGACTCTCAAGGAGGACAGGGAAAAACTATTTGAATCCAAACTTCAACAGATTGAGGAAACAGAGGCAGTAATTCTTGAAGCAATGTCGAAGTCAAAGCTAGGAAGTCCACCTCCTGGGAATTCATGGCTAGGTTCCCTCATTGCTACTCTTATCGGAAATCTGAAGATATCAATTAGCAACGTACATGTTAGATATGAGGATTCAAGCAGCAATCCAGGACATCCATTTTGTTCGGGTGTTACTTTAGCCAAGCTGGCTGCTGTTACAATGGATGAGCAAGGGAATGAAACATTCGATACCAGTGGTGCGCTTGATAAGTTGCAGAAGTCCTTGCAACTTGAGAGACTTGCTATGTATCATGATTCTGATAGTGTTCCTTGGAAGATAGATAAGGGATGGGAAGATCTCACTCCTGAGGAATGGATTCAGATCTTTGAAGATGGTATAGATGAACCTGCTGATGACAGTGGAATGGTGTCTAAGTGGGCTGTGAATCGCAAGTATTTGGTGTCACCTATAAATGGAGTTTTAAAATATCACCGCATTGGAAATCAAGACAGAAATGATCCAGAGGTTCCGTTTGAGAAGGCTTCCCTTGTGCTGAGTGATGTTTCTTTGACAATAACTGAGGCCCAATATTATGATTGGATAAAACTATTAGAAGTTGTTTCAAGATACAAGACTTATGTTGATGTTTCCCATCTGAGACCTTTGGTGCCAGTTTCCGAGGGTCCATATTTGTGGTGGCGCTATGCTGCTCAAGCAACCCTGCAGCAGAAGAAAATGTGTTACCGATTCTCTTGGGACCGCATTCGAGATCTTTGTCAGCTTCGCCGCCGTTACATTCAGTTGTATGCTGGTTCACTGCAACACTCATCAAACGTTAATAATGCAAAAATTAGAGAAATTGAGAAAGATCTGGATTCTAAAGTAATTCTTTTGTGGAGGTTACTTGCACATGCAAAGGTAGAATCTGTTAAATCTAAGGAAGCAGCTGAACAGAGGTCATTCCAGAAGAAAAGCTGGTTTTCATTTATGTGGCATACACCTGCTGAAGATTCTGCCATTGTGGATGCTTCTGAGGGATCACAGTTAACAGAAGAAAGACTGACTAAAGAGGAATGGCAGGCAATCAATAAGTTATTGAGTTATCAGCCAGATGAAGCAGTGACAGCACATTCAGGAAAAGACATGCAGAATATGATCCTGTTTTTGGTAACTGTGTCTGTTGGTCAAGCAGCTGCTAGGATCATTGATATAAATCAAACAGAGGTTGTGTGTTGTAGATTTGAGCAACTTCAAGTCTCAACCAAATTTAAACATCGAAGTACCTACTGTGATGTTTCCTTGAAATTCTATGGTTTGTCTGCGCCTGAAGGCTCACTTGCCCAGAGTGTCTGTAGCGAGAAGAAGGTGAATGCACTAGCCGCTAGCTTTGTACACTCTCCAGTTGGAGAGAATGTTGACTGGAGGCTGTCAGCTACAATTTCTCCCTGCCACGTCACGGTTTTGATGGAAAGCTTTCATCGATTTTTAGAATTTGTGAAAAGGAGTAATGCAGTTAGTCCTACTGTCACGTTGGAAACTGCAACTGCTTTGCAGATGAAAATCGAGCAAGTAACTCGTAGAGCACAGGAGCAATTTCAAATGGTATTAGAAGAACAAAGCAGATTTGCTCTTGATATTGACTTAGATGCTCCAAAAGTAAGAGTTCCTATAAAAACTTGTGGCTTTTCCAAATGTGATAGCCATTTTCTTTTGGATTTTGGTCATTTCACGCTGCACACCAAGGATGGTCAGCACGACGAACAGAGGCAGAACATATATTCTCAGTTTTTTATAACTGGAAGAGATATTGCTGCCTGTTTTATGGATTGTGGTTCTGACTGTCAAAGTTGCAGTTTGGATGTAGCAGATTATGATAATCACCCACTTTTATCTCCTACCCCAGACAATGTTGAGAATTGCTATTCTCTCATAGATAGGTGTGGAATGGCTGTACTTGTTGATCAAATCAAAGTGCCCCACCCTAGTTACCCGTCAATGCGCATCTCAATTCAAGTGCCAAACCTTGGGATTCACTTTTCACCATCGAGATTCCAGAGGCTCATGAAATTGTTAAACATATTTACATTGGAAACTTGCAGTCTGCTTGCTCTCGATGTTTTTCAGGCAGAAATTCCTTGGAGTCTGGCAGATCTTTCTGCAGAAGCTAGAATTTTGACATGGAGGGGGATTGGCAATTCTGTGGCTACCTGGCAACCATGTTATCTCGTGTTGTTGGGAATAAATCTTTATGTGCTGGAGTCTGAAAAGTCGCAGAGTTACCTGCGATACTCAAGCATGGCTGGTAGACAAGTATACGAGGTTCCCCCAGAAAACATTGGTGGTTCACTGTTTTGTCTTGCTGTAAGTTACAAGGGAATGGACAATCAAAAGGCTTTGGAGTCTCCTACTACATTGATTATAGAGTTTCGGGCTGAGGACGAGAATGCCATTTGGTTGAAAGGGCTTATACAAGCTACATATCAAGCTTCTGCTCCTCCATCAGTTAATGTATTGGAAGAAACAAGCAATCCCGTTACTGACTATCGTGAACCCCAGACTCCAAATTCAAAAACAGCTAACCTTGTTATTAATGGGGCACTGGTTGAGACAAAGATATTCATATATGGAAAGACTGCTGATAAAGTTGATGAAGAACATGGTGAGGCTCTTATTCTTGAGGTTCTTGCCAATGGTGGAAAGTTACACATGATTCGCTGGGAAGGTGACCTGACACTTAAGATGAAACTGCACTCTTTAAAAGTCAAAGATGAGCTTCAAGTTCATCTGTCAACGGCCCCCCAGTATTTAGCTTGCTCTGTGCTAAACAATGACAATCGAGTTTCTTCTCCTGGCATAGTTGATCCACACACGAGAGAAATGTCTGCTTTGCTTGATGGGGATGATGATACTTTTACAGATGCTTTGCCAGATTTTACGTCTATCTCAGATACAGGCTTAGGTTCACAAATAATGGATATGGATGCATGTGCAACCACTGAGGACATCAATGATGATACTGGATTTGCATCTCCACAGGCCATAATTTATGAAAAAAGTTTGGTTAAGGAAAAGGTCATTTCTGGTGAGACATTTTATGAGGCGGAGGGTGGTGATTATTCAAATTTTGTATCTGTTACCTTTTTGACTCGGAGTTCTAGCTCGCCTGATTATGATGGTATTGATACCCAGATGAATCTCCGAATGTCAAAATTGGAGTTCTTTTGCAACAGACACACTCTTGTTGCTTTGATTGATTTCGGCCTGGATTTAAGCTCTGTGTATGATGTAGAAGGTAGTGCAGATTTGACTAAGGCTCCACATGATAAACCTTTGATGACCAAAGAAAAGACTGAAAATGGGTGTGTAAAAGGGTTGCTGGGTTATGGTAAAGGTCGTGTGGTATTTTATTTAAACATGAATGTTGACAATGTGACTCTGTTTCTTAACAAAGAGGATGGCTCTTCGTTTGCGATGTTTGTGCAAGAAAGTTTCCTGCTGGATCTCAAGGTCCACCCAAGTTCTCTTGCCATTGAAGGCACCCTAGGAAATTTTAGACTCCGTGATATGTCTCTTGGAACAGATCACTGTTGGGCCTGGCTTTGTGATATATGTAATCCAGGTGTTGAATCCCTTATCAAGTTCAAATTCAACTCTTATAGTGCTGAAGATGATGACTATAAAGGCTATGAGTACAGTTTGTGTGGCCGACTTTCTGCTGTCCGGATCATTTTCCTCTATAGGTTTGTTCAGGAGATAACAGTGTACTTTATGGAACTGGCCACCCCACTTACCGAAGAGGCAATCAAACTTGTTGACAAAGTTGGAGGCTTTGAGTGGCTAATTCAGAAATATGAGATTGATGGAGCTACAGCATTGAAGCTGGACCTGTCACTTGATACTCCAATAATCATTGTTCCAAGGAATTCAACAAGCAAAGATTTCATTCAACTTGATCTGGGACTGCTAAAAGTCACAAATGAATTTAGTTGGTATGGTTCTCATGAGAAAGATCCTTCAGCAGTCCATATTGATGTCCTTCATGCTGAGATTCTGGGGTTCAACATGTCTGTAGGAATTGACGGTTGCTTGGGCAAATCAATGATACGAGAAGGCAAAGGACTTAATGTTTATGTGAGGAGAAGTTTGAGGGATGTCTTAAAAAAAGTTCCTACATTTTCTCTTGAAGTGAAGGTTGGATTATTGCACAGTGTCGTGTCTGACAAAGAATACAAAGTCATTCTGGACTGTGCATACATGAACTTATGCGAAGAGCCAAAGCTTCCCCCGAGTTTCCATGGTGGTAAATCTGGTTCCAAAAATGCAATAAGACTGCTGTTTGATAAGGTCAACATGAACAGTCAACTCCTGCTATCAAAAAGTGTTACCATAGTGGCAGTTGTAATTGATCATGCCCTGTTGGAATTGTATAACGGCACTCATGCAGAGTCTCCTTTCGCTCAAATTGCTATTGAAGGTCTTTGGGTATCGTATCGGATGACTTCATTGTCAGAGACAGATCTCTACATAACCATTCCAAAATTTTCTGTTGTTGACATTCGGCCCGATACAAAGCCCGAAATGCGCCTAATGCTTGGATCATCCACTGATGATTCCAAACAAGTTTCTTCTGGAAGTTTGCCCTTTTCTTTGAATAAGGGGAGCTTTAGAAGAACAGACTCTGATGCTGGATTTTCTCATGTGGATTTACCAATATCAACAATGTTCTTGATGGACTATAGATGGAGCAAATTTTCCCAATCATTAGTGATTAGGGTTCAGCAACCTCGTGTTCTTGTTGTAGCTGATTTCCTTTTGGCTGCGGGTGAGTTTTTTATGGCATTACAAACAATAACTGGTAGAGAGGAAGTGATGGATCCTACGAATGATCCCGTTGGTAAAAACTGTAGCATAGTATTCTCTGGACCTATTTACAAGCAGACACAAGATGTGGTGCACTTGTCTCCAAGTAGACAGTTAGTGGCAGATTTTTTGCACATTGATGAATATACATATGATGGGTGTGGAAAGACCATCTATTTGAGTGCGGAAATGGACGCAGAAGAACTCCATTCAACTAGGCCTCGGCCCATTATTATAATTGGACATGGAAAGAGGTTGCGATTTATGAATGTCAAAATTGAGAATGGTTCTATTTTGACGAAGTATACACATTTGAGTAACGAGAGCAGCTACTCAGTATCTTTAGAGGATGGTGTGGATATCACTTTGCTGGACAGTTACTCATCCGATGATGACAAGAAGAGTCTAAAAGACTTGCATAAATCGTCAGACACTTCAAATATTTCTTTGGATTCTGAAAGTGATCCAAATATGATCCGGAGTTTCAGTATTGAAGCTCAGGTAGTTTCTCCTGAGTTTACCTTCTATGATTCTTCAAAGTTTTCTCTGGATGATTCATATGGTGAAAAGCTTCTCCGTGCGAAGTTGGATTTTAGCTTCATGTATGCATCCAAAGAAAATGATACCTGGGTTCAAGCGCTGGTGAAAGATCTTACAGTTGAGGCTGGTTCTGGTCTTCTTGTTCTTGATCCAGTGGATATATCAGGGGGTTACACTTCTGTGAAGGACAAAGCAAATATCTCTTTGTTATCAACCGATGTTTGCTTCCATCTTTCACTGAGTGTTGTGTCTCTTATACTTAATTTGCAAAGCCAGGCAACATCAGCATTGCAATTCGGAAATTCTATGCCATTGGCTGGATGTACCAATTTTGATCGAATTTGGGTGTCCCCAAAGGAAAATGGATCCTGTTACAACCTTACCTTTTGGAGGCCTCGAGCACCTTCAGGTTATGTTATACTGGGAGATTGTGTGACATCAAGGCCAGTTCCTCCTTCACAGGCAGTAATGGCAGTGAGTAATGCATATGGGCGTGTGCGTAAACCAATTGGTTTTAATCTCATAGGCTTGTTCTCTGCTATTCAAGGATTTGGTGGGGTTGATTCTGATGTTGGTAGTGATTGTTCTCTTTGGATGCCTGTAGCACCAACCGGATACACTGCATTGGGTTGTATAGCAAATATAGGGAAAGAGCAGCCACCTAATCATATTGTTTATTGCATACGTTCTGATCTTGTTACATCAACAACATATTCAGAATGCTTGTTTTCTTCTCCATCAAATCCTCAATTTGCATCTGGATTTAGCATCTGGCGTGTGGAGAATGTTCTTGGATCATTTCATGCCCATTCTAGTACTGAATGCCCTTCTGAAGACAATTGTTGTAACCTCAATCATCTTCTTCTTTGGAATTGGAATCGGCATCAATCTTCTCGTAAAGATCCTGCCTCAAATTTGGCTGTTGATAATATCTATGCAAGTCAGCAAACCAGAAACCAGACTGGAAATTCTTCTGGATGGGATATGGTCAGATCAATTTCAAAGGTAAATAATTGTTTTACGTCGACCCCCAACTTTGAGAGAATCTGGTGGGACAAGGGTAGTGACCTCCGCCGACCAGTATCAGTATGGAGGCCCATCGCACATCGTGGCTATGCCATATTGGGTGACTGCATAACCGAAGGCTTAGAACCACCAGCTGTGGGCATTATTTTTCAGGCTGATTATCCTGAAGTATCTGTGAAACCCGTACAATTTGTTAAAGTTGCCCATGTTGAAGGGAAAGGTTTTGATGAAGTATTCTTTTGGTACCCACTTGCTCCACCTGGTTATGCATCTCTTGGATGCATAGTCTCCAGGACGGATGAAGCCCCATGTGTTGATACAATTTGTTGCCCTAGGATGGATCTTGTTAACCAAGCTAATATTCTTGAGGCGCCAATTTCAAGATCTTCAACTTCAAAGGGATCTCAATGCTGGAGCATTTGGAGAGTTGAAAATCAGGCCTCCACTTTTCTTGCACGGGCTGATCTGAAAAAACCGTCAAGCCGATTGGCTTATAGTATTGGTGATTCCATGAAGCTAAAGACTAGGGATAATATAACTGCAGAGGTGAAACTGAGACGCTTCTCTTTAACTGTTCTAGACAGCTTATGTGGAATGATGAGACCACTATTCAACACGACAATCACCAATATCAAGCTTGCAACGCATGATAGACTGGAGGCTATGAATGCAGTACTGAGTTCCTCTATAGCTGCATCAACCTTCAATACTCAATTAGAAGCGTGGGAGCCACTTTTGGAGCCTTTCAATGGAATATTCAAGTTTGAAACTTCTGATAGTAATGTGCACTCGCCGTCAAAATTTGGGAAGACACTGCGTATTGCTGCCACCAGTATCCTTAATTTAAATGTCAGTGCTGCAAACCTTGAAACTTTTATTGGAAGTGTTCTTTCATGGAGAAGACAATTAGAACTTGAACAGAAAGCAATGAAGATAAATGAGGAATCTAGTGGTCTATGTGGACTAGGAGAGGACCAGACTTTCTCTGCATTGCATGAAGATGACTTTCAGACTTTAATTGTAGAGAATAAACTTCGGTGTGATATCTATGTGAAAAGAGTTGAGGAAAACTTAGACAGAGTGGACCGGTTACATCATGGTGACTACATTTCTATATGGGTGCCGCCTCCAAGGTTTTCTGATAGGTTCAACGTTGTAGATGAATCTAAGGAAGCACATTATTATGTTGCTATACAGATCCACGAAGCCAAGGTTGGTTTACCTATTATAGATGATGGTAACGGCCATAAACTCTTCTGTGCTTTGCGCCTTGTTGATAGTCAACCAACAGATCAACAAAAACTTTTTCCTCAAAGTGCAAGGACAAAATGTGTTAAACCTGCAGTATCAAATTTCAATAACTTGAATGAAGGCACAGTGGAATGGAATGAACTCTTCATATTTGAAGTTCCACGGAAGGGCCCAGCTAAACTGGAAGTGCAGGTGACAAACCTTGCAGCAAAAGCAGGAAAGGGTGAAGTTGTGGGTGCCCTCTCATTTTCTGTTGGGCAAGGTCATGATTTTCAGAACATAGTATCACATCCACTAAGAAGCAAGGCTCAACAGAACAGTACTGAAGATATGGATGAATGCGGATGGCTGCTGGTTTCAACTTCTTATTTTGAGAGGAAAACAACTCCAAGTTTTCAAAGAGATTTGGAGGCTGAAAATGTAACGGATAGAGGCATAGGTTTCTCTGTCGGACTTGGCCCGGATGATGTTTGGCAGAACATTCGGTCATTGCTTCCATTGTCAGTTGTCCCAAAATCGTTACAGAATGGTTTCATGGCTTTGGAAGTTGTTATGAAAAATGGCAAGAAGCATGCAATTTTCAGGGGTCTTGCAACAGTTGTAAATGAGACCGATGTTAAGTTGAAAATTTCAGTATGTCATGCATCTCGAATTCAAGGTCGTGATTCCTCTCTTGGAAGTGATAGCATAAATCCTGGGAGTTCTTTTATTTTGCCTTGGAGAAGTACATCTAGTGATTCTGACCAGTGCTTACAAATATGTCCTGCTGTTGATCATCCTCAGCCTTCATATTCATGGGGTTCTCTTGCGGCAGTGGGTACTGGTTATACTTATGGAAAGGACCTGACTATTATAGATCAGGTTTCACCTTCTAGACAATATACTTCAAAGCAGGAAAATAAGATGCCAAATGTTACTTTCAAGTTGAATCAGCTTGAGAATAAGGATATACTTTTGTGTTGTTCTAGTACCATAAACGAACAATTTTGGCTTAGTGTCGGGGCAGATGCCTCTGCACTTCATACTGAACTGAATGCACCTGTTTATGACTGGAGAATATCTGTCCATTCTCCTATGAAGTTGGAAAATTGCCTTCCCTGTCCAGCTGAATTCACAATCTGGGAAGGAAAACGAGACGGAAAATGTGGACGACAGCATGGTATTATCTCTTCACGTGGGGGTGTACATGTATATTCAGCAGACATTCAGAAACCTTTGTATCTTACGTTGTCTGTCCAGGGTGGTTGGGTCCTGGAGAAGGACCCCATTCTTGTTTTGAATCTTTATTCCAATGACCATGTCTCATCATTCTGGATGGTTCACCAGAAAAGTAAAAGGAGACTGCGTGTGAGTATTGAACATGACATGGGAGGAACCACTGTTGCACCCAAAACAATAAGATTTTTTGTTCCATACTGGATTACTAATGATTCATCTATTTATTTGGCATATCGAGTGGTAGAAGTAGAACCTTCGGACAATGCAGATACGGACTCCCTAATGCTTTCTAGGGCAGTCAACTCTGCAAAAACAGCCTTGAGAAGTCCCACAAACTCTATGGACAGGAAGCATTCTGCCACAAGGAGAAACATCCAAGTACTTGAAGTTATTGAGGACACTAGTCCTGTTCCTAGCATGCTTTCTCCACAAGATTATGCCAGCCGTGGTGGGGCTTCGCTGTTTCCATCTCAAAAAGATGTGTATTTGTCCTCACGAGTGGGGCTTTCTGTTGCCATTCGTCATTCAGACATTTACAGTCCTGGGATATCTCTTTATGAGCTGGAAAAGAAGGAAAGGCTTGATGTAAAAGCATTCAGTTCGGATGGATCCTATTACAAGCTTTCAGCGAGACTGAGCATGACCTCAGACAGAACAAAGGTTGTGCACTTCCAGCCCCACACCTTGTTTATTAATAGAGTTGGTTACAGTCTCTGCCTGCAACAGTGTGATTCTCGGTCCGTGGCGTGGATTCATCCCACGGATTCTCCAAAGCCTTTTTGTTGGCAGTCTAGTGCCAAAGTTGAACTGTTGAAGGTGCGGGTGGATGGTTACAATTGGAGTGCACCATTTAGTGTTTGTTATGAAGGTATCATGCGTGTTTGCTTGAAGAAGGATGCCGGAAATGATCTACTTCAATTTCGAATAGCTGTAAGAAGTGGAGCAAAGAACTCAAGCTATGAAGTTGTTTTCCGTCCAAACTCTTCCATGAGTCCTTACAGGATTGAAAATCGTTCCATGTTTCTACCCATCCAAATTCGGCAAGTGGATGATACCAACGATTCATGGAAATTTCTTCTTCCCAATACAGCAGCTTCTTTTTTATGGGAAGATCTTGGCAGAAGACGTTTATTAGAGATCCTGGTAGAGGGGGAAGACCCATTAAAATCAGAGAAGAATGATATTGATGAGATTTCTGATCACCAACCCATTCATGTGGGAAATGGGCCTTCTAAAGCTTCACGTGTTACTGTAATAAAAGAAGACAAAGTGAATGTCATCAAGATCAGTGACTGGATGCGAGAAAGTGATCCGTCTGGAATCTTGAGTACAAGCCACTCATCACCTATGTCTCAGCTTTCTATACAGAAACAATCACCAATAATCACTGATTGTGAGTTTCATGTTATCATTGAGCTTCCTGAGCTTGGAATATCCATTATTGACCATACACCCGAAGAAATCCTGTACCTTTCGGTTCAGAATCTTCATTGTGCATATTCAACTGGCTTAGGTTCTGGAATCAGTAGGTTCAAACTTAGAATGCGAGGGATACAATTGGATAACCAGTTGCCCCTTACTCCAACACCTATTCTTTTTAGACCACAGAAAGTTGGAGAAGATACTGACTATATCTTGAAACTTTCAATCACAATGCAATCAAATGGGTCACTAGATCTATGTGTCTATCCATATATCGGTCTCCAGGGACCTGAAAACTCTGCCTTTTTGATAAACATTCATGAGCCAATCATTTGGCGCCTTCATGAGATGGTTCAGCAGGTCAACCTCAGTCGGTTGTCTGATACTCAAACAACTGCTGTTTCTGTTGATCCAATTATTGAAATTGGAGTTCTTAGCATTTCAGAGGTTCAATTCAAAGTGTCAATGGCTATGTCACCTAGTCGGCGGCTGAGAGGTGTCCTTGGATTTTGGGCATCTTTGATGATTGCATTGGGGAACACTCCGAATATGCAAGTGAGGATAAAACAAAATTTTAATGAGAACGTGTGCATGAGGCAGAGTACAGTGATTAGCATTGTTATTTCAAAAGTTCAAAAGGCAATGAGAATGATGATAGCATCAGCAATAACTTCCGATGAGCATCTCCTCCGCAAAAGGCTGCCTCGTGTTATTGGTGGTGATAATTTGATTCGACCTTATGACGACTACAAAGCACAGGGACAGGCTATATTGCAGCTGGCAGAATCAGGTTCATTTTTCCTCCAGGTTGATCTGTTTAAAGTGCGTGGGAAGTTTGCTCTATCAGATGCTTATGAGGATCACTTTTTACTCCGCAAAGGAAGAATTCTTCTAGTCACTCATCGAAGAGTGATACTGTTGCATCAACCCTTAGCTCAGAAGTTCAACCCGGCTAGGGATCCGTGTTCTGTATTGTGGGATGTACTGTGGGATGACCTGGTGATAATGGAGATGGCACATGGGAAAAAGGACCACCCAAAAGCTCCACCTTCACGGGTCATTCTTTATTTACAAGATAAATCAGAGATGAGGGAACAAGTTCATGTCATAAAGTGCTTCCCTGATACCCCCCAAGCACTGGACGTGTACTCTTCAATTGAACGAGCAATGAACACTTACAGACCAAACAAACAAAAGAAAATGCTGAAAAAGAATGTGACAATGCCATATGCGCCAATTATTGATAGCGCCAGTGCTGAAGCTACACCAAAAGATCCAGGGTCGCCCCGACTGGTGCCTGCATCAATTCCTCGTTCAAATTTTGGTAGCCGCTCCAACTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Chorein_N Pex24p SHR-BD VPS13 VPS13_C VPS13_mid_rpt Vps62

Protein Analysis

4000

Amino Acids

447.39

Weight (kDa)

5.99

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 9 - 703 7e-101 VPS13-like family N-terminal region
Vps62 PF06101 2003 - 2173 1.7e-12 Vacuolar protein sorting-associated protein 62
Vps62 PF06101 2315 - 2398 2.9e-08 Vacuolar protein sorting-associated protein 62
VPS13_M PF25033 2434 - 2543 9.3e-06 VPS13-like family middle region
VPS13_VAB PF25036 2858 - 3426 4.2e-23 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3785 - 3890 1.7e-12 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2132, 5435
AarI CACCTGC 2 cut(s) 1348, 8197
AasI GACNNNNNNGTC 1 cut(s) 4843
Acc16I TGCGCA 1 cut(s) 2339
Acc36I ACCTGC 6 cut(s) 754, 1348, 2628, 8113, 8197, 11005
Acc65I GGTACC 2 cut(s) 188, 7008
AccB1I GGYRCC 9 cut(s) 188, 1006, 3875, 7008, 7135, 7885, 8252, 10992, 11950
AccB7I CCANNNNNTGG 4 cut(s) 404, 2363, 6056, 11794
AccBSI CCGCTC 1 cut(s) 11988
AccI GTMKAC 5 cut(s) 2644, 2652, 5308, 5504, 6764
AccIII TCCGGA 2 cut(s) 4059, 5676
AclI AACGTT 2 cut(s) 1173, 7917
AcoI YGGCCR 3 cut(s) 4042, 4116, 8008
AcvI CACGTG 2 cut(s) 9191, 10478
AcyI GRCGYC 2 cut(s) 7136, 10993
AdeI CACNNNGTG 2 cut(s) 5981, 6848
AfeI AGCGCT 1 cut(s) 5838
AflII CTTAAG 1 cut(s) 3074
AflIII ACRYGT 6 cut(s) 475, 4401, 9202, 10477, 11241, 11799
AgeI ACCGGT 1 cut(s) 7851
AhlI ACTAGT 1 cut(s) 9635
AjiI CACGTC 2 cut(s) 1792, 11800
AjuI GAANNNNNNNTTGG 8 cut(s) 4515, 4547, 7110, 7142, 7626, 7658, 7962, 7994
AleI CACNNNNGTG 1 cut(s) 5918
Alw21I GWGCWC 6 cut(s) 1924, 5295, 6142, 7554, 9903, 10081
Alw44I GTGCAC 4 cut(s) 5291, 7550, 9899, 10077
AlwNI CAGNNNCTG 5 cut(s) 93, 167, 5018, 9948, 10527
Ama87I CYCGRG 2 cut(s) 4624, 6135
Aor13HI TCCGGA 2 cut(s) 4059, 5676
Aor51HI AGCGCT 1 cut(s) 5838
ApaI GGGCCC 1 cut(s) 8189
ApaLI GTGCAC 4 cut(s) 5291, 7550, 9899, 10077
AseI ATTAAT 2 cut(s) 2928, 9927
AsiGI ACCGGT 1 cut(s) 7851
Asp700I GAANNNNTTC 7 cut(s) 18, 714, 1812, 5769, 6709, 8546, 11754
Asp718I GGTACC 2 cut(s) 188, 7008
AspA2I CCTAGG 2 cut(s) 3880, 7097
AsuC2I CCSGG 2 cut(s) 8477, 11606
AsuII TTCGAA 2 cut(s) 34, 10156
AsuNHI GCTAGC 1 cut(s) 1721
AvaI CYCGRG 2 cut(s) 4624, 6135
AvrII CCTAGG 2 cut(s) 3880, 7097
AxyI CCTNAGG 1 cut(s) 705
BaeGI GKGCMC 8 cut(s) 2316, 2938, 5295, 7554, 8189, 8257, 9903, 10081
BaeI ACNNNNGTAYC 4 cut(s) 5814, 5847, 9218, 9251
BalI TGGCCA 1 cut(s) 4118
BamHI GGATCC 4 cut(s) 5212, 6104, 9842, 11614
BanI GGYRCC 9 cut(s) 188, 1006, 3875, 7008, 7135, 7885, 8252, 10992, 11950
BanII GRGCYC 1 cut(s) 8189
BarI GAAGNNNNNNTAC 2 cut(s) 9169, 9201
BauI CACGAG 5 cut(s) 2564, 3208, 5124, 9729, 11361
BbrPI CACGTG 2 cut(s) 9191, 10478
BbsI GAAGAC 7 cut(s) 5867, 6579, 7580, 7672, 10363, 10395, 10503
Bbv12I GWGCWC 6 cut(s) 1924, 5295, 6142, 7554, 9903, 10081
BbvCI CCTCAGC 2 cut(s) 2772, 8796
BceAI ACGGC 6 cut(s) 1113, 3147, 4786, 7543, 8023, 9663
BciVI GTATCC 3 cut(s) 6347, 7610, 10779
BclI TGATCA 4 cut(s) 2299, 4744, 8788, 10432
BcnI CCSGG 2 cut(s) 8477, 11606
BcuI ACTAGT 1 cut(s) 9635
BfoI RGCGCY 5 cut(s) 1042, 5840, 7139, 10996, 11907
BfrI CTTAAG 1 cut(s) 3074
BfuAI ACCTGC 6 cut(s) 754, 1348, 2628, 8113, 8197, 11005
BfuI GTATCC 3 cut(s) 6347, 7610, 10779
BglI GCCNNNNNGGC 1 cut(s) 545
BlnI CCTAGG 2 cut(s) 3880, 7097
BmcAI AGTACT 4 cut(s) 6556, 7440, 8338, 9615
BmeT110I CYCGRG 2 cut(s) 4624, 6135
BmgBI CACGTC 2 cut(s) 1792, 11800
BmrI ACTGGG 2 cut(s) 3133, 6170
BmtI GCTAGC 1 cut(s) 1725
BmuI ACTGGG 2 cut(s) 3133, 6170
BoxI GACNNNNGTC 1 cut(s) 9636
BpiI GAAGAC 7 cut(s) 5867, 6579, 7580, 7672, 10363, 10395, 10503
BplI GAGNNNNNCTC 2 cut(s) 3782, 3814
Bpu10I CCTNAGC 7 cut(s) 2772, 3295, 5697, 8796, 10656, 10744, 11587
Bpu14I TTCGAA 2 cut(s) 34, 10156
BpuMI CCSGG 2 cut(s) 8477, 11606
Bsa29I ATCGAT 1 cut(s) 1819
BsaAI YACGTR 2 cut(s) 9191, 10478
BsaBI GATNNNNATC 5 cut(s) 719, 1551, 1898, 3364, 11337
BsaHI GRCGYC 2 cut(s) 7136, 10993
BsaI GGTCTC 4 cut(s) 991, 7360, 8618, 10940
BsaWI WCCGGW 4 cut(s) 4059, 5676, 6350, 7851
Bse118I RCCGGY 1 cut(s) 7851
Bse21I CCTNAGG 1 cut(s) 705
Bse3DI GCAATG 8 cut(s) 378, 429, 6026, 7698, 7754, 8504, 11304, 11829
Bse8I GATNNNNATC 5 cut(s) 719, 1551, 1898, 3364, 11337
BseAI TCCGGA 2 cut(s) 4059, 5676
BseCI ATCGAT 1 cut(s) 1819
BseJI GATNNNNATC 5 cut(s) 719, 1551, 1898, 3364, 11337
BseMI GCAATG 8 cut(s) 378, 429, 6026, 7698, 7754, 8504, 11304, 11829
BseRI GAGGAG 3 cut(s) 2823, 4489, 11333
BseSI GKGCMC 8 cut(s) 2316, 2938, 5295, 7554, 8189, 8257, 9903, 10081
BseYI CCCAGC 3 cut(s) 3054, 3715, 8188
BsgI GTGCAG 5 cut(s) 2057, 3071, 3657, 8225, 9015
BshNI GGYRCC 9 cut(s) 188, 1006, 3875, 7008, 7135, 7885, 8252, 10992, 11950
BshTI ACCGGT 1 cut(s) 7851
BshVI ATCGAT 1 cut(s) 1819
BsiHKAI GWGCWC 6 cut(s) 1924, 5295, 6142, 7554, 9903, 10081
BsiHKCI CYCGRG 2 cut(s) 4624, 6135
BsiSI CCGG 7 cut(s) 4060, 5677, 6351, 7852, 8477, 10134, 11606
BslFI GGGAC 8 cut(s) 1109, 4311, 6073, 6806, 8510, 9546, 10956, 11430
BsmBI CGTCTC 2 cut(s) 7315, 9144
BsmFI GGGAC 8 cut(s) 1109, 4311, 6073, 6806, 8510, 9546, 10956, 11430
Bso31I GGTCTC 4 cut(s) 991, 7360, 8618, 10940
BsoBI CYCGRG 2 cut(s) 4624, 6135
Bsp119I TTCGAA 2 cut(s) 34, 10156
Bsp120I GGGCCC 1 cut(s) 8185
Bsp13I TCCGGA 2 cut(s) 4059, 5676
Bsp1407I TGTACA 2 cut(s) 1729, 9199
Bsp19I CCATGG 1 cut(s) 4633
BspDI ATCGAT 1 cut(s) 1819
BspEI TCCGGA 2 cut(s) 4059, 5676
BspHI TCATGA 6 cut(s) 649, 2400, 4339, 8281, 10975, 10999
BspMAI CTGCAG 4 cut(s) 1065, 2500, 7309, 8110
BspMI ACCTGC 6 cut(s) 754, 1348, 2628, 8113, 8197, 11005
BspOI GCTAGC 1 cut(s) 1725
BspQI GCTCTTC 2 cut(s) 3805, 4602
BspT104I TTCGAA 2 cut(s) 34, 10156
BspT107I GGYRCC 9 cut(s) 188, 1006, 3875, 7008, 7135, 7885, 8252, 10992, 11950
BspTI CTTAAG 1 cut(s) 3074
BspTNI GGTCTC 4 cut(s) 991, 7360, 8618, 10940
BsrBI CCGCTC 1 cut(s) 11988
BsrDI GCAATG 8 cut(s) 378, 429, 6026, 7698, 7754, 8504, 11304, 11829
BsrFI RCCGGY 1 cut(s) 7851
BsrGI TGTACA 2 cut(s) 1729, 9199
BssAI RCCGGY 1 cut(s) 7851
BssNAI GTATAC 2 cut(s) 2653, 5505
BssNI GRCGYC 2 cut(s) 7136, 10993
BssSI CACGAG 5 cut(s) 2564, 3208, 5124, 9729, 11361
Bst1107I GTATAC 2 cut(s) 2653, 5505
Bst2BI CACGAG 5 cut(s) 2564, 3208, 5124, 9729, 11361
BstACI GRCGYC 2 cut(s) 7136, 10993
BstAFI CTTAAG 1 cut(s) 3074
BstAUI TGTACA 2 cut(s) 1729, 9199
BstBAI YACGTR 2 cut(s) 9191, 10478
BstBI TTCGAA 2 cut(s) 34, 10156
BstDSI CCRYGG 6 cut(s) 58, 4633, 8177, 9679, 9975, 9993
BstEII GGTNACC 1 cut(s) 3062
BstENI CCTNNNNNAGG 3 cut(s) 6127, 9272, 10379
BstH2I RGCGCY 5 cut(s) 1042, 5840, 7139, 10996, 11907
BstNSI RCATGY 8 cut(s) 479, 1253, 1486, 3327, 4405, 8591, 9206, 9655
BstPAI GACNNNNGTC 1 cut(s) 9636
BstPI GGTNACC 1 cut(s) 3062
BstSLI GKGCMC 8 cut(s) 2316, 2938, 5295, 7554, 8189, 8257, 9903, 10081
BstV2I GAAGAC 7 cut(s) 5867, 6579, 7580, 7672, 10363, 10395, 10503
BstXI CCANNNNNNTGG 3 cut(s) 1032, 10450, 10989
BstZ17I GTATAC 2 cut(s) 2653, 5505
Bsu15I ATCGAT 1 cut(s) 1819
Bsu36I CCTNAGG 1 cut(s) 705
BsuI GTATCC 3 cut(s) 6347, 7610, 10779
BsuTUI ATCGAT 1 cut(s) 1819
BtgI CCRYGG 6 cut(s) 58, 4633, 8177, 9679, 9975, 9993
BtgZI GCGATG 2 cut(s) 3824, 6823
BtrI CACGTC 2 cut(s) 1792, 11800
BtsI GCAGTG 6 cut(s) 1154, 1464, 6219, 6357, 7577, 8835
BveI ACCTGC 6 cut(s) 754, 1348, 2628, 8113, 8197, 11005
CaiI CAGNNNCTG 5 cut(s) 93, 167, 5018, 9948, 10527
CciI TCATGA 6 cut(s) 649, 2400, 4339, 8281, 10975, 10999
Cfr10I RCCGGY 1 cut(s) 7851
ClaI ATCGAT 1 cut(s) 1819
CpoI CGGWCCG 1 cut(s) 9972
CseI GACGC 2 cut(s) 5402, 7332
CsiI ACCWGGT 2 cut(s) 7024, 11652
CspAI ACCGGT 1 cut(s) 7851
CspCI CAANNNNNGTGG 2 cut(s) 7198, 7233
CspI CGGWCCG 1 cut(s) 9972
DinI GGCGCC 2 cut(s) 7137, 10994
DraI TTTAAA 6 cut(s) 822, 1609, 3096, 3750, 7611, 11476
DraIII CACNNNGTG 2 cut(s) 5981, 6848
DrdI GACNNNNNNGTC 1 cut(s) 4843
DseDI GACNNNNNNGTC 1 cut(s) 4843
EaeI YGGCCR 3 cut(s) 4042, 4116, 8008
EciI GGCGGA 2 cut(s) 3455, 6800
Eco147I AGGCCT 4 cut(s) 140, 5419, 6133, 7205
Eco24I GRGCYC 1 cut(s) 8189
Eco31I GGTCTC 4 cut(s) 991, 7360, 8618, 10940
Eco32I GATATC 4 cut(s) 459, 5560, 7810, 9783
Eco47III AGCGCT 1 cut(s) 5838
Eco72I CACGTG 2 cut(s) 9191, 10478
Eco81I CCTNAGG 1 cut(s) 705
Eco88I CYCGRG 2 cut(s) 4624, 6135
Eco91I GGTNACC 1 cut(s) 3062
EcoNI CCTNNNNNAGG 3 cut(s) 6127, 9272, 10379
EcoO109I RGGNCCY 5 cut(s) 8185, 8857, 9265, 9277, 10943
EcoO65I GGTNACC 1 cut(s) 3062
EcoRI GAATTC 5 cut(s) 409, 4261, 8667, 9125, 11541
EcoRV GATATC 4 cut(s) 459, 5560, 7810, 9783
EcoT22I ATGCAT 6 cut(s) 3325, 5809, 6226, 7036, 7049, 8662
EcoT38I GRGCYC 1 cut(s) 8189
EgeI GGCGCC 2 cut(s) 7137, 10994
EheI GGCGCC 2 cut(s) 7137, 10994
Esp3I CGTCTC 2 cut(s) 7315, 9144
FalI AAGNNNNNCTT 8 cut(s) 1212, 1244, 1659, 1691, 3096, 3128, 4985, 5017
FaqI GGGAC 8 cut(s) 1109, 4311, 6073, 6806, 8510, 9546, 10956, 11430
FauI CCCGC 2 cut(s) 5152, 10047
FauNDI CATATG 4 cut(s) 5350, 5758, 6226, 11884
FbaI TGATCA 4 cut(s) 2299, 4744, 8788, 10432
FblI GTMKAC 5 cut(s) 2644, 2652, 5308, 5504, 6764
FriOI GRGCYC 1 cut(s) 8189
FspAI RTGCGCAY 1 cut(s) 2339
FspI TGCGCA 1 cut(s) 2339
GsaI CCCAGC 3 cut(s) 3058, 3719, 8192
HaeII RGCGCY 5 cut(s) 1042, 5840, 7139, 10996, 11907
HapII CCGG 7 cut(s) 4060, 5677, 6351, 7852, 8477, 10134, 11606
HgaI GACGC 2 cut(s) 5402, 7332
Hin1I GRCGYC 2 cut(s) 7136, 10993
HindIII AAGCTT 7 cut(s) 1810, 2823, 4616, 5768, 7400, 9854, 10470
HpaI GTTAAC 2 cut(s) 1386, 7114
HpaII CCGG 7 cut(s) 4060, 5677, 6351, 7852, 8477, 10134, 11606
Hpy99I CGWCG 2 cut(s) 2099, 6766
Hsp92I GRCGYC 2 cut(s) 7136, 10993
KasI GGCGCC 2 cut(s) 7135, 10992
Kpn2I TCCGGA 2 cut(s) 4059, 5676
KpnI GGTACC 2 cut(s) 192, 7012
Ksp22I TGATCA 4 cut(s) 2299, 4744, 8788, 10432
KspAI GTTAAC 2 cut(s) 1386, 7114
LguI GCTCTTC 2 cut(s) 3805, 4602
MabI ACCWGGT 2 cut(s) 7024, 11652
MbiI CCGCTC 1 cut(s) 11988
MfeI CAATTG 5 cut(s) 6246, 6577, 10069, 10790, 11811
MlsI TGGCCA 1 cut(s) 4118
MluNI TGGCCA 1 cut(s) 4118
Mly113I GGCGCC 2 cut(s) 7136, 10993
Mox20I TGGCCA 1 cut(s) 4118
Mph1103I ATGCAT 6 cut(s) 3325, 5809, 6226, 7036, 7049, 8662
MroI TCCGGA 2 cut(s) 4059, 5676
MroXI GAANNNNTTC 7 cut(s) 18, 714, 1812, 5769, 6709, 8546, 11754
MscI TGGCCA 1 cut(s) 4118
Msp20I TGGCCA 1 cut(s) 4118
MspA1I CMGCKG 5 cut(s) 1286, 1532, 6899, 9122, 11434
MspCI CTTAAG 1 cut(s) 3074
MspI CCGG 7 cut(s) 4060, 5677, 6351, 7852, 8477, 10134, 11606
MunI CAATTG 5 cut(s) 6246, 6577, 10069, 10790, 11811
NarI GGCGCC 2 cut(s) 7136, 10993
NciI CCSGG 2 cut(s) 8477, 11606
NcoI CCATGG 1 cut(s) 4633
NdeI CATATG 4 cut(s) 5350, 5758, 6226, 11884
NheI GCTAGC 1 cut(s) 1721
NmeAIII GCCGAG 1 cut(s) 5401
NsbI TGCGCA 1 cut(s) 2339
NsiI ATGCAT 6 cut(s) 3325, 5809, 6226, 7036, 7049, 8662
NspI RCATGY 8 cut(s) 479, 1253, 1486, 3327, 4405, 8591, 9206, 9655
NspV TTCGAA 2 cut(s) 34, 10156
OliI CACNNNNGTG 1 cut(s) 5918
PaeI GCATGC 2 cut(s) 8591, 9655
PaeR7I CTCGAG 1 cut(s) 6135
PagI TCATGA 6 cut(s) 649, 2400, 4339, 8281, 10975, 10999
PaqCI CACCTGC 2 cut(s) 1348, 8197
PceI AGGCCT 4 cut(s) 140, 5419, 6133, 7205
PciI ACATGT 3 cut(s) 475, 4401, 9202
PciSI GCTCTTC 2 cut(s) 3805, 4602
PdmI GAANNNNTTC 7 cut(s) 18, 714, 1812, 5769, 6709, 8546, 11754
PflFI GACNNNGTC 1 cut(s) 9314
PflMI CCANNNNNTGG 4 cut(s) 404, 2363, 6056, 11794
PfoI TCCNGGA 3 cut(s) 505, 7055, 9267
PinAI ACCGGT 1 cut(s) 7851
PluTI GGCGCC 2 cut(s) 7139, 10996
PmaCI CACGTG 2 cut(s) 9191, 10478
PmlI CACGTG 2 cut(s) 9191, 10478
Ppu21I YACGTR 2 cut(s) 9191, 10478
PpuMI RGGWCCY 4 cut(s) 8857, 9265, 9277, 10943
PscI ACATGT 3 cut(s) 475, 4401, 9202
PshAI GACNNNNGTC 1 cut(s) 9636
PshBI ATTAAT 2 cut(s) 2928, 9927
PsiI TTATAA 2 cut(s) 2132, 5435
Psp1406I AACGTT 2 cut(s) 1173, 7917
Psp5II RGGWCCY 4 cut(s) 8857, 9265, 9277, 10943
PspCI CACGTG 2 cut(s) 9191, 10478
PspEI GGTNACC 1 cut(s) 3062
PspFI CCCAGC 3 cut(s) 3054, 3715, 8188
PspOMI GGGCCC 1 cut(s) 8185
PspPPI RGGWCCY 4 cut(s) 8857, 9265, 9277, 10943
PspXI VCTCGAGB 1 cut(s) 6135
PsrI GAACNNNNNNTAC 6 cut(s) 2643, 2675, 4633, 4665, 6307, 6339
PstI CTGCAG 4 cut(s) 1065, 2500, 7309, 8110
PstNI CAGNNNCTG 5 cut(s) 93, 167, 5018, 9948, 10527
PsyI GACNNNGTC 1 cut(s) 9314
PvuII CAGCTG 5 cut(s) 1286, 1532, 6899, 9122, 11434
Rsr2I CGGWCCG 1 cut(s) 9972
RsrII CGGWCCG 1 cut(s) 9972
SalI GTCGAC 1 cut(s) 6763
SapI GCTCTTC 2 cut(s) 3805, 4602
ScaI AGTACT 4 cut(s) 6556, 7440, 8338, 9615
SexAI ACCWGGT 2 cut(s) 7024, 11652
SfoI GGCGCC 2 cut(s) 7137, 10994
Sfr274I CTCGAG 1 cut(s) 6135
SfuI TTCGAA 2 cut(s) 34, 10156
SlaI CTCGAG 1 cut(s) 6135
SmiI ATTTAAAT 1 cut(s) 7611
SpeI ACTAGT 1 cut(s) 9635
SphI GCATGC 2 cut(s) 8591, 9655
SseBI AGGCCT 4 cut(s) 140, 5419, 6133, 7205
SspDI GGCGCC 2 cut(s) 7135, 10992
SspI AATATT 4 cut(s) 929, 5641, 7126, 7521
StuI AGGCCT 4 cut(s) 140, 5419, 6133, 7205
SwaI ATTTAAAT 1 cut(s) 7611
TaqII GACCGA 4 cut(s) 8490, 8642, 9960, 10922
TauI GCSGC 6 cut(s) 1128, 1721, 7891, 8828, 11146, 11988
Tth111I GACNNNGTC 1 cut(s) 9314
Van91I CCANNNNNTGG 4 cut(s) 404, 2363, 6056, 11794
Vha464I CTTAAG 1 cut(s) 3074
VneI GTGCAC 4 cut(s) 5291, 7550, 9899, 10077
VspI ATTAAT 2 cut(s) 2928, 9927
XagI CCTNNNNNAGG 3 cut(s) 6127, 9272, 10379
XbaI TCTAGA 2 cut(s) 7342, 8888
XceI RCATGY 8 cut(s) 479, 1253, 1486, 3327, 4405, 8591, 9206, 9655
XcmI CCANNNNNNNNNTGG 3 cut(s) 1032, 6825, 9571
XhoI CTCGAG 1 cut(s) 6135
XmaJI CCTAGG 2 cut(s) 3880, 7097
XmiI GTMKAC 5 cut(s) 2644, 2652, 5308, 5504, 6764
XmnI GAANNNNTTC 7 cut(s) 18, 714, 1812, 5769, 6709, 8546, 11754
ZrmI AGTACT 4 cut(s) 6556, 7440, 8338, 9615
Zsp2I ATGCAT 6 cut(s) 3325, 5809, 6226, 7036, 7049, 8662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.