FvH4_4g20980

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0002758
Physical Location & Seq
Reverse (-)
24098029 .. 24133876
35848 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g20980.t1

Sequence Viewer

Length: 12459 bp
ATGTTCGAAGCTCACGTCCTGCATTTGCTTAGAAGGTATTTGGGGGAATATGTCGAAGGACTTTCTGTTGAAGCCTTAAGAATAAGTGTCTGGAAAGGTGATGTTGTTCTCAAAGATTTGAAATTAAAGGCAGAGGCCCTAAATTCACTAAAACTTCCGGTCACTGTGAAAGCTGGTTTTATAGGTACCATTACATTAAAGGTTCCATGGAAAAGTTTGGGCAAAGAACCTGTGATTGTTCTCATTGACCGTGTATTCATCCTTGCTCATCCTGTTACTGATGGCAGCACTCTCAAGGAGGACAGGGACAAACTATTTGAAGCTAAACTTCAAGAGATTGAGGAAGCAGAGTCGGCAACTCTGGAAGCAATATCAAAGTCAAAGATAGGAAGTCAATCTAATGGAAATTCATGGCTAGGTTCCCTTATTGCTACTATTATTGGGAATCTAAAGATATCAATTAGCAATGTACATATAAGATATGAGGATTCGGTCAGTAATCCAGGACATCCTTTTAGTTCGGGTGCCACTTTAGCCAAGCTTGCTGCTGTTACCATGGATGAGGAAGGGAAGGAGACATTTGATACCAGTGGTGCTCTTGATAAGTTGCGAAAGTCATTGCAACTAGAGAGACTTGCTATGTATCATGATTCTGATAGTGTACCTTGGAAGACAATTAAGGGATGGGAGGAACTCGCTCCGGAGGAATGGGTCGAGATTTTTGAAGAAGGAATACGCGAACCTGCGGATGACCATGCAATGACGTCTAAGTGGGCTATGAATCGCAAGTATTTGGTGTCACCTATAAATGGTGTTTTAAAGTATCACCGTGTAGGAAACCAAGAAAGAAATGATCCAGAGGTTCCATTTGAGAACGCTTCCCTTGTCCTAAGTGACGTTTCCTTGACAGTAACAGAGGCTCAATATCGTGATTGGATAAAGCTTTTGGAAGTTGTTTCAAGATACAAGAGATATGTTGAATTTGCTCATCTGAGGCCAGCGCTACCAGTATCAGAGGGTCCATATTTGTGGTGGCGTTATGCTTCTCAAGCAGGACTTCAGCAGAAGAAATTGTGTTATCGGTTCTCGTGGGACCGCATTCGGCTTCTTTGCCAGCTTCGTCGCCGTTACATTCAGTTATATGCTGGTTTCTTACAACACCTGACAAATGTTGATAATGCTGAAATTAGAGAAATTGAGAAAGATTTGGATTCTAAAGTAATTCTTCTGTGGAGGTTACTTGCGCATGCAAAGGTGGAATCTGTAAAATCGAAGGAAGCGGCTGAACAGAGGATGCTCCAGAAGAAAAGCTGGTTTTCTTTTAGATGGAGAACACCTGATGAATCTGCTGAAATTTCCGAGGGTTCACAGTCTCCAGAAGAAAGACTGACTAAAGAGGAGTGGCAAGCAATAAATAAGTTACTGAGTAACCAGCCAGATGAAACATTGGCATCCCACTCAGGGAAGGATATGCAGAATATGATCCGGTTTATGGTAACTGTGTCTGTTAATCAGGCTGCTGCTAGGATTGTAGATATAAATCAGACCGAGATTCTGTGTTGTAAGTTTGAGCAACTTCAAGTGTCAACGAAGTTTAAACATCAAAGTACATACTGTGATGTGTCATTGAGATTCTATGGTCTATATGCACCTGAAGGGTCGCTTGCTCAGAGTGTATCTAGTGAGCGGAAGGTGAATGCACTGACTGCTAGCTTTGTATACTCTCCAGTTGGAGAGAATGTTGATTGGAGGCTCTCAGCTACCACTTCACCTTGTCATGTCACGGTTTTAATGGAAAGTTGTGATCGCTTTTTGGATTTTGTGAAAAGGAGTAATGCAGTTAGTCCTACTGTTACATTGGAAACAGCAACTGCTTTGCAGATGCAAATTGAGAATTTGACTCGGAGAGCACAAGAGCAATTTCAAATGGTATTAGAAGAACAAAGCAGATTTGCCCTTGATATTGATTTGGATGCTCCAAAAGTTAGAATTCCTATCAGAACCAAGGGCTCTTCCAAATGTGATAGCCATTTTCTGTTGGATCTTGGTCATTTCACTCTGCAAACGAAGGATACTCAGCATGAAGAACAGAAGAAGAGCCTGTATTCTCGTTTTTTCATAACTGGAAGAGATATTGCTGCATTTTTTACGGATTGTGGTTCTGATCGTCAAATTTGCACTTTAGAATCACCTGATTCTGATAACCATCCACCGGTTAGCCCGGAAAATGTTGACAATTTCTATCCTCTCATAGATAGGTGTGGAATGGCTCTACTCGTCGATCAGATCAAAGTACCTCACCCAAGTTTTCCGTCGATGCGTGTTTCAATTCAAGTGCCAAACCTCGGGATGCACTTTTCACCATCAAGATTTCAGAGACTCATGAAATTATTAAACATATTGTATGGTACTCTGGAAACTGTTAGTCAGCCAGCTGTTGATAACTTTCAAGCAGAACGTGCCCCGTGGAGTCCTGCAGATCTTTGCACAGATGCTAGAATTTTAGTATGGAAGGGGATCGGCAATTCTGTGGCTACATGGCAGCCTTGTTTTCTTGTGTTGTCGGGGACAAATATATTTGTTTTGGAGTCCGAGAAGTCTCAGAGTTATCAGCGATACTCCAGCATGGCTGGTAGACAAGTATGTGAGGTTCCTCGAACAAGTATTGGTGGTTCACCATTTTGCCTTGCTGTTATCCACAGGGGGATGGACACACAAAAGGCTCTGGAGTCTTCTAGTAGCTTGATAATTGAGTTCCGTGGGGAGGAGGAGAAGATCGTTTGGTTGAAAGGACTAGTACAAGCAACATATCAAGCTTCTGCTCCCCCTTCAGTTGATGTCTTGGGAAAAAAAATTGATCATGTTGCTGAGTTCGGTGAGCCTCAGACCAGCAATTCTAAAACAGCTGACCTTGTCATTAATGGGGCATTGGTGGAGACAAAATTATCTATTTATGGAAAGATGGGTGACAAAGATGCTGAAGAACTTAATGAGAATCTGATGCTAGAGGTTCTTGCTAGTGGGGGGCAGGTTCATATGATTCGTTGGGAAGGTGACATGACACTTAAGACAAAGCTTCACTCTTTAAAAATCAAAGATGAGCTTCAAGGTCGTGTCTCTACAACCCCACAGTATTTGGCTTATTCTGTGCTAAAGAGTGACAATTTAGTCTCTTCCCCGGGCATAGTTGATTCACATTGGAAAGAAATGTCTGTTTTACTTCATGAGGAGGATGATGCTTTCACAGATGCTTTGCCAGATTTTATGTCTGTATCAGATGCAGGCTTTGGTTCACCACTTTCAGACACTGTCTCATGTGTGTCAACTGAGGACATCAATGATGCTGCTGGATTCGCATCAGCTGAAGGCTTAGTTCTTGAAAAGAATCTTGTTAAGGCGAAGTGCATTTCTGCTGAGGAATTTTATGAGACAGAGGATAGTGACTATTCCAATTTCGTATCTGTCACCTTCTCGACTCTGAGTTCTAGTTCACCTGATTATAATGGTATCGACACACAGATGAGCCTCCGTATGTCAAAACTGGAATTCTTCTGCAACAGACCTACTTTGGTTGCTTTAATTGATCTTGGCCTGGACTTAAGCTCTGTGTACAGTGCCGAAAGTACTGCAGACAGCACTGAAGGTTCAGACGAAAAATCTTTACTGAACAAAGAAAAGACCGAAGAAATTGGGCGTGTCAAAGGGTTGCTGGGTTATGGTAAAGGTCGTGTAGTATTCTATTTGAACATGAACGTGGACAGTGTAACTGTTTTTCTCAACAAGGAGGATGCTTCTCTGCTTGCGACGTTTGTGCAAGAAAGTTTTGTGCTAGATCTCAAGGTCCATCCAAGTTCTCTTTCCATCGATGGCACCCTAGGAAATTTTAGACTCCGTGATATGTCTCTTGGAGAAGATAACTGTTGGGCTTGGCTATGTGATATACGCAATCCGGATGTGGAATCCCTTATAAAGTTCAACTTCAAGTCTTACAGTGCTGAAGATGATGACTATGAAGGTTATGACTATAGTTTGTGTGGTCGATTTGCTGCTGTTCGTATTGTCTTCCTTTATAGGTTTATTCAGGAGATAACCGCATACTTTATGGAACTTGCTACCCCACATACTGAAGAAGCAATCAAACTTGTTGATAAGGTTGGAGGCTTTGAGTGGCTAATTGAGAAGTATGAAATTGATGGAGCTGCAGCACTTAAGCTTGATCTGTCACTCGATACTCCAATAATCATTGTTCCCCGGAATTCAACAAGCAATGATTTCATTCAACTTGATCTGGGCCAGCTACAAGTCACAAATGAATTTAGTTGGCATGGTTCTCCAGAAAAGGATCCTTCTGCAGTCCACATTGATGTGCTTCATGCTGAGATTCTGGGGATCAACATGTCTGTAGGAATTGAGGGTCGCATGGGTAGATCAATGATACGAGAAGGCAAAGGATTTGATGTTTATGTCCGGAGAAGTTTGAGGGATATCTTCAAAAAAGTCCCAACATTTTCTCTTGAAGTGAAGGTTGGCTTATTGCACTGTGTCATGTCTGACAAAGAATATAAAGTTATTCTGGATTGCGCATACACGAATTTATGTGAAGAACCAAAGCTTCCCCCTAGTTTTCGTGGTGGAAAATCTGATTCAAAGGATAAAATTAGGCTGCTAGTCGATAAGGTCAACACAAATAGTCAAATTCTGCTATCACGGACTGTTACGATAGTGGCAGTTCTGGTTGATCATGCACTGTTGGAGTTGTATAATTGTATTCATGCGGAGTCTCCTTTCGCTCAAATTGCTCTTGAAGGTCTGTGGGTGTCGTATCGGATGACTTCATTGTCTGAAACAGATCTGTATATAACAATTTCAAAATTTTCTGTTGTTGACATTCGCCCTGATACAAAACCTGAAATGCGCCTTATGCTTGGATCATCCACTGATGCCTTCAAACAAGTTTCTTCTGGAAGTTTGCCTTTTTTCTTAAAAAGGGGGAGCTTTAGGAGAACCGACTCTGATGCTGGATTTTATGGGGACTCACCAATATCAACAATGTTCTTAATGGACTACAGATGCCGCACATCAACCCAATTGTTTGTGATTAGGATTCAGCAGCCTCGAGTTCTAGTTGTAGCAGATTTCCTTCTGGCGGTGGGCGAGTTTTTTGTTCCTGCATTGGGGACAATAACTGGTAGGGAGGAAGTGATGGATCGTAATAATGATCCAATTGGTAAAAACAGTAGCATAGTGTTCACAGAGCCTACATACAAACAGACAGAAGATGTGGTGCATTTGTCTCCAAGTAGACAGTTGGTCGCAGATATTTTAAGCATCGATGAATATACATATGATGGTTGTGGAAAGACCATTCACTTGAGTGAGGAAATTGATGCTAAAGAGCTCCATTCAACTAGACCTCGACCAATAATTATAATTGGACAGGGAAAAAGGTTGCGGTTTATGAATGTCAAAATAGAGAATGGCTCTCTTTTGCGGAAGTATACATACTTAAATAATGATAGCAGCTACTCAGTATCCTTTGAGGACGGTGTTGACATTGAGTTGCTGGAGACTTCCTCATGTGATGATGATAAGAAGAGTCTAGAATACTTGCATGAATCGCCAGACTCCTCAAATGTTTCAGATTTTGATAGTGATCCAAATAAGATCCCAAGTTTCAGCTTTGAAACACAGGTTGTTTCTCCTGAGTTTACCTTTTACGATGGTTCAAAGTCGTCTCTGGATGATTCATTCGGTGAAAAGCTTCTCCGTGCAAAGCTGGATTTTAGCTTCATGTATGCATCTAAAGAAAATGATACCTGGATTCGAGCTCTGGTGAAGGATCTCACTATTGAGGCTGGTTCTGGGCTTGTTGTGCTTGATCCAGTGGATATATCTGGGGGATACACTTCCGTTAAGGACAAAACAAGCATGTCCTTGTTATCAACTGATATCTGCTTCCATCTATCACTAAGTGCTATATCTTTGATAAGTAATTTGCAAAGCCAGGCTACAGCGGCACTGCAATATGGAAATTCAGCACCCTTGGCCCCTTGTACCAACTTTGATCGAATTTGGGTATCCCCAAAAGAAAATGGGTCCTGTTTCAACCTTACGTTTTGGAGGCCACGAGCACCTTCAAATTATGTTATCTTGGGAGATTGCGTGACATCAAAGCCAATTCCTCCCTCTCAGGCGGTGATGGCAGTGAGTAATACATATGGGCGTGTGTGTAAACCAACTGGTTTCAATCTCATAGGATTGTTCTCTGCAATTCAAGGATTTACTGGGGGTGATTCTGATAGTAATACAGATTGTTCTCTTTGGATGCCTATAGCACCACCAGGATACACAGCATTGGGCTCTGTAGCAAATATCGGGAATGAACCCCCACCCAAACATATTGTTTATTGCATTCGTTCTGATCTCGTAACATCAACAACCTTTATAGAATCCTTATTCTGTTCTCCATCAAATCCACAATTTACATCTGGATTTAGCATCTGGCGTGTTGAGAATGTGCTTGGATCATTTTATGCTCATTCTTCTACTGAGTGCCCTTCCGGAGACAAGTGTTGTAACCTCAATCATCTTCTTCTTTGGAACTCAAGTCGGCATCGTTCTTCTGCTAAAGAAACTGCTTCAGATCTAGCTGTTGCTGAAAACCGTGAAAGTCAGGAAAGTAGAAATCAGTCACATACTTCTGGATGGGATATTGTCAGATCAATTTCGAAGGCAACTAAATGTTATATGTCTACCCCTAATTTTGAGAGAATCTGGTGGGAAAAGGGTAGTGACATACGCCGACCAGTCTCAATATGGAGACCCATTCCTCGTCGAGGCTATGCCATCTTGGGTGATTGCATTACTGAAGGCTTAGAACCACCAGCTGTTGGCATAATATTTAGATCTGATGATCCTGAAATATCTGCGAAGCCTGTGCAATTTACTAAAGTTGCCCATGTGGTTGGGAAAGGTTTAGATGAAGCTTTCTTCTGGTACCCGATTGCTCCACCGGGTTATGCTTCTGTAGGATGCATAGTCTCCAGAATAGATGAACCCCCAAGTGTAAATTCATTTTGTTGCCCTAGGATGGATCTTGTTAACCAAGCTAATATTCTTGAGGCGCCTATTTCAAGATCTTCAGCTTCAAAAGGTTCTCAGTGCTGGAGCATCTGGAGAGTTGAAAATCAGGCCTGCACTTTTCTTGCACGTGGTGATCTGAAGAAACCATCAAGCAGATTGGCTTATGCTATCGGTGACTCCATGAAGCCTAAGACTAGGGAAAACATAACTGCTGAGGTGAAGCTAAGAAGCTTGTCTGTAACTGTTGTAGACAGCTTGTGTGGAATGATGACTCCACTATTTGACACAACAATTACCAATATCAAACTTGCAACACATGGTCGAATGGAGGCTATGAATGCAGTACTAATTTCGTCTATTGCTGCATCAACCTTCAATACACAGTTGGAAGCGTGGGAGCCGCTTGTGGAACCTTTTGATGGAATATTCAAGTTTGAAACATATGATACTAGTCTACAGTCGCCATCAGAATTTGGGAAGACGGTGCGTATTGCCGCCACAAGTGTTGTTAATATAAATGTCAGCGCTGCAAATCTTGAAACTTTTATAGGGACCATTCTTTCATGGAGAAGACAATTGGACCTTGAACAGAAAGCAAAGAAGATAAATGAGGAAGCATGTGGTCTAAATGGTCAAGGGGAGGACCAGACTTTGTCGGCACTGGATGATGACGACTTTCAGACTGTGATAGTAGAGAATAAACTTGGCTGTGATATTTATCTGAAGAAAGTCGAACAAAATTCAGATATGGTGAACCAGTTACGTCATGGTGACTCTGTCTCTCTGTGGGTTCCGCCTCCACGGTTTTCAGACAGGTTAAATGTTGCAGATGAATCCAAGGAAGCTCGTTTATATGTTGCTATACAAATTCATGAAGCTAAGGGTTTACCTATTATAGATGATGGTAATAGCCATAACTTCTTATGTGCTTTGAGACTCGCTGTTGATAGCCAGGCAGCAGATCAACAAAAACTTTTTCCTCAAAGTGCAAGGACAAAATGTGTCAAGCCTTCAGTTTTGAAAAATAGTAACCTGAATGAAGGCGCTGCTGAATGGAATGAACTTTTCATATTTGAAGTTCCTCGGAAGGGCCCAGCTAAACTGGAAGTGGAAGTGACAAACCTTGCAGCAAAAGCGGGAAAAGGTGAAGTAGTTGGTGCGCTCTCATTTTCTGTTGGGGAAGATGCAAATATGTTGAGGAAGCTAGCGTCAGTGAAGGCTCTCCATCAAGGTCATGATATTCAGAGTATAGTATCCTATCCGCTAAAGGGCACGGTTCAACATAACCAACATGAAGACCCGGAGAAATATGGTTGCCTGTTGGTTTCAACTTCATATTTTGAGAGGACAACAACTCCAAGTCTTCAAACAGATTTGCAGAATGAGAATCTAGTTGATAGAGACATAGGTTTCTATATTGGTATGGGCCCCAAAGGTGTTTGGCAAAGCATACGGGCGTTGCTTCCATTGTCAGTTGTTCCAAAATTGTTTCAAGATGATTATATTGCATTGGAAGTTACACTGAAAAATGGCAAGAAACATGCTATTTTCAGGGGTCTTGCAACAGTTGTAAATGAGACTGATATTAAGCTGAAAATTTCAGTATGTGGTGCTTCTCGGATTCAAGCTTATGATTCCTCTTCTGGAACAAGTGAAAACATAAATCGCCCCAGGATTGATGTCTCTGCCATAAACCCTGGAGGTTCATTTGTTTTACCTTGGAAAAGTACAGCAAGTAATTCTGACCGATGCTTACAAATTTGCCCTTCTGTTGATCATCCTCAGCGTCCATACTCTTGGGGTTCTGTTGTTTCGGTGGGATCTGGTTATGCATCTGGAAAGGACTTGACGGTTATGGATCAGGTTTCACTTTCAAGAGAGTATACTTCAAAGCAAGAAAATAAGATGCCTAATGTTAGTTTCCAATTAAATCAGCTTGAGAAGAAAGATATACTTTTGTGTTGCACTAGTACAATAAATAAGCAACTTTGGCTTAGTGTTGGGGCAGATGCCTCAGTGCTTCATACTGAACTCAATGCACCTGTTTATGATTGGAGAATTTCTGTCAACTCTCCTATGAAGTTAGAAAACAGACTTCCCTGTCCCGCTGAATTCACAATTTGGGAAAAGATGAAAGAAGGAAAGTGTATTGAGCGCGAGAATGGTATGATCTCTTCACGTGGCGGTGTCCATATATATTCAGCGGACATTCAGAAACCGATATATCTCACCTTGTTTGTTCAAGGTGGCTGGGTCATGGAGAAGGGCCCCATTCTTGCTTTGAATCTTTATTCTAATGATCATGTCTCATCGTTCTGGATGGTTCACCAGAAAAGTAAAAGGAGATTGCGAGTGAGTATTGAACGTGACATGGGAGGGACCACTGCGGCACCCAAAATCATAAGGTTTTTTGTTCCTTATTGGATCATTAATGATTCTTCTATTCCTTTGGCGTACCGAGTGGTGGAAGTGGAGCCTTTGGACAATGCAGATCCAGATTCCCCGATTGTTTCTAGAGCAGTCAAGTCTGCAAAAACAGCCTTAAAAAGTCCTACATACTCTATGGAAAGGAAGCATTCTGTTGCAAGGAGAAACATTCAAGTACTTGATGTTATTGAGGATACTAGTCCTGTTCCTAACATGCTTTCTACGCAAGACTACACAAGCCGCAGTGGTGCTATGCTGTTTTCATCTCAGAAAGATGTGTATCCGTCCTCTCGAGTTGGCCTCTCTGTTGCAATTTGCCATTCAGAAGTCTACAGTTCTGGAATTTCCCTTCATGAGCTCGAAAAGAAGGAACGGCTTGATGTAAAAGCATTCAGTTCAGATGGATCTTATTACATGCTATCAGCGCGGTTGAACATGACCTCGGACAGAACAAAGGTTGTGCACTTCCAACCCCACACATTGTTCGTGAATAGAGTTGGTTACAGCCTGTGCTTGCAGCAGTGTGATTCTCAGGCAGTGACATGGATTCATCCCACTGATTCTCCAAAACCCTTCTGTTGGCAGTCTGGTTCCAAAGTTGAAAGGTTGAAGCTGCGGGTGGATGGTTACAAATGGAGTACACCATTTAGTGTTTGTAATGAAGGTATCATGCGTGTTTGCTTGAGGAAAGATACTGGAAATGATCAACTGCTGTTACGAGTTGGAGTGAGAAGTGGAGCAAAGAACTCAAGCCTAGAAGTTATTTTCCGTCCGAACTCTATCTTGAGTCCTTACAGGATTGAAAATCGTTCCATGTTTTTACCCATTCGTATTCGGCAAGTGGATGGAACCTCTGATTCATGGACCTTTCTTCTTCCTAATTCAGCAACTTCCTTTTTATGGGAAGATCTTGGTAGAAGACGACTATTAGAAATGCTGGTAGAGGGGGCAGACCCATTGAAATCAGAGATTTATGATATTGATGAGATATCTGATCATCAACCAATTAAAGTGGGAAGTGGACCCTCTAAAGCTCTGCGTGTTACCATAATTAAAGAAGATAAAGTTAATGTTATCAAGATCAGTGACTGGATGCCAGAGAGTGAACCTACTGGAAACTTGAGTAGAAGGCATTCGTCATCCCTCTCTCAGCTTTCAAAACAGCAACAAACAGCATCGACCTCTGATTGTGAATTTCATATTATTGTTGAGTTAGCTGAGCTTGGGATATCCCTTATTGACCATACACCTGAAGAAATACTGTACCTTTCGATTCAGAATCTTCTTTTTGCATATTCAACTGGCTTGGGCTCTGGTGTCAGTAGGTTAAAACTTAGAATGCGTGGGATACAATTGGACAACCAATTGCCACTAACCCCAATGCCAGTTCTCTTTAGGCCACAAAGAGTTGGAGAGGAGATTGACTATATGTTGAAATTTTCCGTCACAATGCAATCCAATGGGTCACTGGATCTTTGTGTCTATCCGTATATTGGTCTCCATGGACCTGAGAATTCTGCCTTTTTGATAAACATTCATGAACCTATTATTTGGCGCCTTCATGAAATGATTCAGCAGGTCAACATTAGTCGGTTGTATGATACTCAAACAACTGCTGTTTCTGTTGATCCAATCGTTGAAATTGGGGTTCTTAACATATCAGAGGTTCGATTCAAAATGTCAATGACTATGTCCCCTAGTCAGCGGCCAAGAGGTGTTCTTGGATTTTGGGCATCGTTAATGACTGCATTAGGGAACACTGAGAATATGGCAGTGAGGATAAATCAAAGGTTTCTTGAAAACGTGTGCATGAGGCAGAGTTCCATGATTAGTATTGCCATTTCAAACATTCAAAAGGATCTTTTAGGCCAGCCTTTACAACTGCTATCAGGTGTCGATATACTGGGTAACGCAAGTAGTGCACTTGGACATATGAGCAGGGGTGTGGCTGCCTTGTCATTTGATAAGAAGTTCATTCAAAGCCGACAAAAACAGGAAAGCAAGGGTGTAGAGGACTTGGGTGATGTTATTAGAGAAGGTGGTGGAGCATTGGCAAAAGGGTTCTTCAGAGGGGTCACTGGCATATTGACAAAACCACTTGAGGGTGCTAAATCTTCTGGCGTCGAGGGATTTGTTCAAGGTGTTGGGAAAGGATTAATTGGTGCAGCTGCACAACCGGTGAGCGGGGTTCTGGATCTTTTGTCAAAGACTACTGAAGGTGCTAATGCAATGAGAATGAAGATAGCAGCAGCTATAACTTCTGAAGACCAACTCCTTCGTAGGCGACTGCCGCGTGTCATTAGCGGTGATAATTTACTTAAACCATATGAGGATTACAAAGCACAAGGACAGGTTATATTGCAGCTGGCAGAATCAGGTTCATTTTTTCTCCAGGTTGATCTATTTAAAGTACGTGGAAAGTTTGCGTTATCTGATGCCTATGAAGATCACTTTTTAATCCGCAAAGGAAAAGTTCTTATGGTCACTCACCGAAGAGTGCTACTGCTGCAACAACCCTTCAACACTATTTCTCAAAAGAAGTTCAACCCAGCTAGGGATCCCTGTTCGGTATTGTGGGATGTACTTTGGGATGACCTGGTGACAATGGAACTGGCATTTGGAAAAAAAGACCACCCAAAAGCTCCACATTCGCAGCTCATTCTTTATTTACGTGATAGATCGACTGAGATGAGGGAGCAAACTCGTGTAATAAAGTGCATCCGTGACAGGCCCCAGGCTTTTGAAGTGTACACCTCAATTGAACGAGCAATGAGCATTTATGGACCACACAAAACAAAGGAAAGGTCCATAAAGAGTGTGACAAAGCCATATTCACCGCTTGCTAACAGCACCGGTGCTGAAGTTAATCCAAAAGAAGGGCTTAGCGCTTTGTCACCCCGACCAATGCCGCTTCCTCCTAGTTCCATCTTTGGCAGAAGCGCCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Chorein_N Pex24p SHR-BD VPS13 VPS13_C VPS13_mid_rpt Vps62

Protein Analysis

4153

Amino Acids

463.11

Weight (kDa)

5.95

Isoelectric Point (pI)

43.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 1 - 698 2.8e-98 VPS13-like family N-terminal region
ATG2_CAD PF13329 8 - 220 2.7e-08 Autophagy-related protein 2
VPS13_M PF25033 1349 - 1760 7.4e-09 VPS13-like family middle region
Vps62 PF06101 2000 - 2170 2.5e-10 Vacuolar protein sorting-associated protein 62
Vps62 PF06101 2310 - 2394 1.2e-07 Vacuolar protein sorting-associated protein 62
VPS13_M PF25033 2427 - 2542 3.6e-06 VPS13-like family middle region
VPS13_VAB PF25036 2866 - 3450 3.6e-24 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3932 - 4040 9.5e-12 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 3501, 3968, 5429
AasI GACNNNNNNGTC 3 cut(s) 3167, 4837, 9183
AatII GACGTC 1 cut(s) 767
Acc16I TGCGCA 2 cut(s) 1245, 4582
Acc36I ACCTGC 3 cut(s) 751, 3019, 11077
Acc65I GGTACC 2 cut(s) 185, 6996
AccB1I GGYRCC 7 cut(s) 185, 524, 3869, 6996, 7123, 9472, 11064
AccB7I CCANNNNNTGG 1 cut(s) 6890
AccBSI CCGCTC 2 cut(s) 1687, 11694
AccI GTMKAC 9 cut(s) 1719, 2635, 5302, 5498, 6752, 7332, 7537, 8966, 9840
AccII CGCG 4 cut(s) 738, 9240, 9937, 11803
AccIII TCCGGA 4 cut(s) 700, 3949, 4467, 6560
AcoI YGGCCR 1 cut(s) 11216
AcvI CACGTG 2 cut(s) 7211, 9263
AcyI GRCGYC 4 cut(s) 764, 7124, 11065, 11631
AdeI CACNNNGTG 2 cut(s) 5972, 7214
AfeI AGCGCT 3 cut(s) 1002, 7609, 12397
AflII CTTAAG 4 cut(s) 76, 3065, 3598, 4208
AflIII ACRYGT 2 cut(s) 4395, 11313
AgeI ACCGGT 3 cut(s) 2212, 11686, 12362
AhdI GACNNNNNGTC 1 cut(s) 5309
AhlI ACTAGT 4 cut(s) 2794, 7532, 9050, 9707
AjiI CACGTC 1 cut(s) 16
AleI CACNNNNGTG 1 cut(s) 5373
Alw21I GWGCWC 8 cut(s) 598, 1912, 5400, 5830, 6133, 9870, 9975, 11434
Alw44I GTGCAC 2 cut(s) 9971, 11430
AlwNI CAGNNNCTG 3 cut(s) 1871, 3308, 10599
Ama87I CYCGRG 4 cut(s) 2345, 3178, 5115, 9801
Aor13HI TCCGGA 4 cut(s) 700, 3949, 4467, 6560
Aor51HI AGCGCT 3 cut(s) 1002, 7609, 12397
ApaI GGGCCC 3 cut(s) 8177, 8513, 9353
ApaLI GTGCAC 2 cut(s) 9971, 11430
ArsI GACNNNNNNTTYG 5 cut(s) 32, 299, 331, 12299, 12331
AseI ATTAAT 3 cut(s) 2919, 9513, 11666
AsiGI ACCGGT 3 cut(s) 2212, 11686, 12362
Asp700I GAANNNNTTC 3 cut(s) 5760, 10642, 11079
Asp718I GGTACC 2 cut(s) 185, 6996
AspA2I CCTAGG 2 cut(s) 3874, 7085
AsuC2I CCSGG 6 cut(s) 2222, 3179, 3180, 4252, 7014, 8384
AsuII TTCGAA 2 cut(s) 6, 6728
AsuNHI GCTAGC 2 cut(s) 1709, 8287
AvaI CYCGRG 4 cut(s) 2345, 3178, 5115, 9801
AvrII CCTAGG 2 cut(s) 3874, 7085
BaeGI GKGCMC 8 cut(s) 2464, 6557, 8177, 8357, 8513, 9353, 9975, 11434
BamHI GGATCC 2 cut(s) 4342, 12067
BanI GGYRCC 7 cut(s) 185, 524, 3869, 6996, 7123, 9472, 11064
BanII GRGCYC 9 cut(s) 2012, 5400, 5830, 6362, 8177, 8513, 9353, 9870, 10823
BarI GAAGNNNNNNTAC 6 cut(s) 717, 749, 5486, 5518, 9241, 9273
BauI CACGAG 3 cut(s) 1087, 6126, 12213
BbrPI CACGTG 2 cut(s) 7211, 9263
BbsI GAAGAC 9 cut(s) 677, 2724, 4054, 7568, 7660, 8385, 8438, 10435, 11781
Bbv12I GWGCWC 8 cut(s) 598, 1912, 5400, 5830, 6133, 9870, 9975, 11434
BbvCI CCTCAGC 3 cut(s) 3414, 7296, 8865
BceAI ACGGC 2 cut(s) 1110, 9899
BcgI CGANNNNNNTGC 8 cut(s) 3608, 3642, 3793, 3827, 4997, 5031, 6919, 6953
BciVI GTATCC 9 cut(s) 2065, 5542, 5894, 6088, 6338, 8347, 9697, 9801, 10851
BclI TGATCA 6 cut(s) 2857, 4738, 8857, 9382, 10213, 10504
BcnI CCSGG 6 cut(s) 2222, 3179, 3180, 4252, 7014, 8384
BcuI ACTAGT 4 cut(s) 2794, 7532, 9050, 9707
BfoI RGCGCY 7 cut(s) 1004, 7127, 7611, 8130, 11068, 12399, 12453
BfrI CTTAAG 4 cut(s) 76, 3065, 3598, 4208
BfuAI ACCTGC 3 cut(s) 751, 3019, 11077
BfuI GTATCC 9 cut(s) 2065, 5542, 5894, 6088, 6338, 8347, 9697, 9801, 10851
BglII AGATCT 7 cut(s) 2479, 3832, 4849, 6643, 6905, 7136, 10417
BlnI CCTAGG 2 cut(s) 3874, 7085
BlpI GCTNAGC 2 cut(s) 10728, 12392
BmcAI AGTACT 3 cut(s) 3625, 7428, 9687
BmeRI GACNNNNNGTC 1 cut(s) 5309
BmeT110I CYCGRG 4 cut(s) 2345, 3178, 5115, 9801
BmgBI CACGTC 1 cut(s) 16
BmrI ACTGGG 2 cut(s) 6294, 11423
BmtI GCTAGC 2 cut(s) 1713, 8291
BmuI ACTGGG 2 cut(s) 6294, 11423
BpiI GAAGAC 9 cut(s) 677, 2724, 4054, 7568, 7660, 8385, 8438, 10435, 11781
BplI GAGNNNNNCTC 6 cut(s) 5465, 5497, 5558, 5590, 9795, 9827
Bpu10I CCTNAGC 4 cut(s) 3414, 7296, 7962, 8865
Bpu1102I GCTNAGC 2 cut(s) 10728, 12392
Bpu14I TTCGAA 2 cut(s) 6, 6728
BpuMI CCSGG 6 cut(s) 2222, 3179, 3180, 4252, 7014, 8384
Bsa29I ATCGAT 2 cut(s) 3864, 5331
BsaAI YACGTR 4 cut(s) 7211, 9263, 11924, 12182
BsaBI GATNNNNATC 6 cut(s) 1539, 2205, 3355, 5652, 7800, 9789
BsaHI GRCGYC 4 cut(s) 764, 7124, 11065, 11631
BsaI GGTCTC 2 cut(s) 6814, 11012
BsaWI WCCGGW 9 cut(s) 157, 700, 1485, 2212, 3949, 4467, 6560, 11686, 12362
BsaXI ACNNNNNCTCC 8 cut(s) 1725, 1755, 6147, 6177, 8422, 8452, 10057, 10087
Bse118I RCCGGY 3 cut(s) 2212, 11686, 12362
Bse3DI GCAATG 6 cut(s) 472, 617, 765, 4273, 11745, 12285
Bse8I GATNNNNATC 6 cut(s) 1539, 2205, 3355, 5652, 7800, 9789
BseAI TCCGGA 4 cut(s) 700, 3949, 4467, 6560
BseCI ATCGAT 2 cut(s) 3864, 5331
BseJI GATNNNNATC 6 cut(s) 1539, 2205, 3355, 5652, 7800, 9789
BseMI GCAATG 6 cut(s) 472, 617, 765, 4273, 11745, 12285
BseRI GAGGAG 6 cut(s) 1412, 2780, 2783, 3242, 5617, 10940
BseSI GKGCMC 8 cut(s) 2464, 6557, 8177, 8357, 8513, 9353, 9975, 11434
BseYI CCCAGC 4 cut(s) 3709, 8176, 9333, 12058
BsgI GTGCAG 3 cut(s) 7180, 11664, 11694
Bsh1236I CGCG 4 cut(s) 738, 9240, 9937, 11803
BshNI GGYRCC 7 cut(s) 185, 524, 3869, 6996, 7123, 9472, 11064
BshTI ACCGGT 3 cut(s) 2212, 11686, 12362
BshVI ATCGAT 2 cut(s) 3864, 5331
BsiHKAI GWGCWC 8 cut(s) 598, 1912, 5400, 5830, 6133, 9870, 9975, 11434
BsiHKCI CYCGRG 4 cut(s) 2345, 3178, 5115, 9801
BsmBI CGTCTC 1 cut(s) 5739
BsmI GAATGC 8 cut(s) 1098, 1702, 6411, 7426, 9658, 9899, 10642, 10854
Bso31I GGTCTC 2 cut(s) 6814, 11012
BsoBI CYCGRG 4 cut(s) 2345, 3178, 5115, 9801
Bsp119I TTCGAA 2 cut(s) 6, 6728
Bsp120I GGGCCC 3 cut(s) 8173, 8509, 9349
Bsp13I TCCGGA 4 cut(s) 700, 3949, 4467, 6560
Bsp1407I TGTACA 3 cut(s) 469, 3609, 12258
Bsp1720I GCTNAGC 2 cut(s) 10728, 12392
Bsp19I CCATGG 3 cut(s) 206, 555, 11011
BspDI ATCGAT 2 cut(s) 3864, 5331
BspEI TCCGGA 4 cut(s) 700, 3949, 4467, 6560
BspFNI CGCG 4 cut(s) 738, 9240, 9937, 11803
BspHI TCATGA 8 cut(s) 646, 2382, 3223, 7954, 8317, 9862, 11047, 11071
BspMAI CTGCAG 4 cut(s) 2479, 3631, 4204, 4354
BspMI ACCTGC 3 cut(s) 751, 3019, 11077
BspOI GCTAGC 2 cut(s) 1713, 8291
BspQI GCTCTTC 2 cut(s) 2017, 2090
BspT104I TTCGAA 2 cut(s) 6, 6728
BspT107I GGYRCC 7 cut(s) 185, 524, 3869, 6996, 7123, 9472, 11064
BspTI CTTAAG 4 cut(s) 76, 3065, 3598, 4208
BspTNI GGTCTC 2 cut(s) 6814, 11012
BsrBI CCGCTC 2 cut(s) 1687, 11694
BsrDI GCAATG 6 cut(s) 472, 617, 765, 4273, 11745, 12285
BsrFI RCCGGY 3 cut(s) 2212, 11686, 12362
BsrGI TGTACA 3 cut(s) 469, 3609, 12258
BssAI RCCGGY 3 cut(s) 2212, 11686, 12362
BssNAI GTATAC 3 cut(s) 1720, 5499, 8967
BssNI GRCGYC 4 cut(s) 764, 7124, 11065, 11631
BssSI CACGAG 3 cut(s) 1087, 6126, 12213
Bst1107I GTATAC 3 cut(s) 1720, 5499, 8967
Bst2BI CACGAG 3 cut(s) 1087, 6126, 12213
Bst6I CTCTTC 8 cut(s) 2017, 2090, 2122, 3178, 5588, 8728, 9262, 11998
BstACI GRCGYC 4 cut(s) 764, 7124, 11065, 11631
BstAFI CTTAAG 4 cut(s) 76, 3065, 3598, 4208
BstAPI GCANNNNNTGC 3 cut(s) 1706, 2459, 11429
BstAUI TGTACA 3 cut(s) 469, 3609, 12258
BstBAI YACGTR 4 cut(s) 7211, 9263, 11924, 12182
BstBI TTCGAA 2 cut(s) 6, 6728
BstDSI CCRYGG 6 cut(s) 206, 555, 2465, 2758, 7883, 11011
BstENI CCTNNNNNAGG 1 cut(s) 6834
BstFNI CGCG 4 cut(s) 738, 9240, 9937, 11803
BstH2I RGCGCY 7 cut(s) 1004, 7127, 7611, 8130, 11068, 12399, 12453
BstNSI RCATGY 7 cut(s) 1250, 4399, 5932, 7704, 8627, 9727, 9928
BstSLI GKGCMC 8 cut(s) 2464, 6557, 8177, 8357, 8513, 9353, 9975, 11434
BstUI CGCG 4 cut(s) 738, 9240, 9937, 11803
BstV2I GAAGAC 9 cut(s) 677, 2724, 4054, 7568, 7660, 8385, 8438, 10435, 11781
BstXI CCANNNNNNTGG 3 cut(s) 1029, 6965, 8880
BstZ17I GTATAC 3 cut(s) 1720, 5499, 8967
Bsu15I ATCGAT 2 cut(s) 3864, 5331
BsuI GTATCC 9 cut(s) 2065, 5542, 5894, 6088, 6338, 8347, 9697, 9801, 10851
BsuTUI ATCGAT 2 cut(s) 3864, 5331
BtgI CCRYGG 6 cut(s) 206, 555, 2465, 2758, 7883, 11011
BtrI CACGTC 1 cut(s) 16
BtsI GCAGTG 7 cut(s) 6017, 6210, 9465, 9760, 10037, 10053, 11289
BveI ACCTGC 3 cut(s) 751, 3019, 11077
CaiI CAGNNNCTG 3 cut(s) 1871, 3308, 10599
CciI TCATGA 8 cut(s) 646, 2382, 3223, 7954, 8317, 9862, 11047, 11071
Cfr10I RCCGGY 3 cut(s) 2212, 11686, 12362
Cfr9I CCCGGG 1 cut(s) 3178
ClaI ATCGAT 2 cut(s) 3864, 5331
CseI GACGC 3 cut(s) 8280, 8858, 11620
CsiI ACCWGGT 1 cut(s) 12105
CspAI ACCGGT 3 cut(s) 2212, 11686, 12362
CspCI CAANNNNNGTGG 6 cut(s) 3117, 3152, 7570, 7605, 10503, 10538
DinI GGCGCC 2 cut(s) 7125, 11066
DraI TTTAAA 4 cut(s) 819, 1597, 3087, 11917
DraIII CACNNNGTG 2 cut(s) 5972, 7214
DrdI GACNNNNNNGTC 3 cut(s) 3167, 4837, 9183
DriI GACNNNNNGTC 1 cut(s) 5309
DseDI GACNNNNNNGTC 3 cut(s) 3167, 4837, 9183
EaeI YGGCCR 1 cut(s) 11216
Eam1104I CTCTTC 8 cut(s) 2017, 2090, 2122, 3178, 5588, 8728, 9262, 11998
Eam1105I GACNNNNNGTC 1 cut(s) 5309
EarI CTCTTC 8 cut(s) 2017, 2090, 2122, 3178, 5588, 8728, 9262, 11998
EciI GGCGGA 1 cut(s) 7866
Ecl136II GAGCTC 3 cut(s) 5398, 5828, 9868
Eco147I AGGCCT 1 cut(s) 7193
Eco24I GRGCYC 9 cut(s) 2012, 5400, 5830, 6362, 8177, 8513, 9353, 9870, 10823
Eco31I GGTCTC 2 cut(s) 6814, 11012
Eco32I GATATC 5 cut(s) 456, 4486, 5950, 10500, 10740
Eco47III AGCGCT 3 cut(s) 1002, 7609, 12397
Eco53kI GAGCTC 3 cut(s) 5398, 5828, 9868
Eco72I CACGTG 2 cut(s) 7211, 9263
Eco88I CYCGRG 4 cut(s) 2345, 3178, 5115, 9801
EcoICRI GAGCTC 3 cut(s) 5398, 5828, 9868
EcoNI CCTNNNNNAGG 1 cut(s) 6834
EcoO109I RGGNCCY 7 cut(s) 136, 6096, 8173, 8510, 9349, 9350, 12240
EcoRI GAATTC 5 cut(s) 1989, 3545, 4255, 9194, 11023
EcoRV GATATC 5 cut(s) 456, 4486, 5950, 10500, 10740
EcoT22I ATGCAT 3 cut(s) 5800, 7037, 8917
EcoT38I GRGCYC 9 cut(s) 2012, 5400, 5830, 6362, 8177, 8513, 9353, 9870, 10823
EgeI GGCGCC 2 cut(s) 7125, 11066
EheI GGCGCC 2 cut(s) 7125, 11066
Esp3I CGTCTC 1 cut(s) 5739
FauI CCCGC 4 cut(s) 8212, 9196, 10119, 11687
FauNDI CATATG 6 cut(s) 3036, 5344, 6217, 7525, 11442, 11836
FbaI TGATCA 6 cut(s) 2857, 4738, 8857, 9382, 10213, 10504
FblI GTMKAC 9 cut(s) 1719, 2635, 5302, 5498, 6752, 7332, 7537, 8966, 9840
FriOI GRGCYC 9 cut(s) 2012, 5400, 5830, 6362, 8177, 8513, 9353, 9870, 10823
FspI TGCGCA 2 cut(s) 1245, 4582
GsaI CCCAGC 4 cut(s) 3713, 8180, 9337, 12062
HaeII RGCGCY 7 cut(s) 1004, 7127, 7611, 8130, 11068, 12399, 12453
HgaI GACGC 3 cut(s) 8280, 8858, 11620
Hin1I GRCGYC 4 cut(s) 764, 7124, 11065, 11631
HincII GTYRAC 9 cut(s) 1587, 2233, 3324, 4681, 4885, 5551, 7102, 9151, 11092
HindII GTYRAC 9 cut(s) 1587, 2233, 3324, 4681, 4885, 5551, 7102, 9151, 11092
HpaI GTTAAC 1 cut(s) 7102
Hpy99I CGWCG 6 cut(s) 1125, 2282, 2317, 3808, 6837, 11636
Hsp92I GRCGYC 4 cut(s) 764, 7124, 11065, 11631
KasI GGCGCC 2 cut(s) 7123, 11064
Kpn2I TCCGGA 4 cut(s) 700, 3949, 4467, 6560
KpnI GGTACC 2 cut(s) 189, 7000
Ksp22I TGATCA 6 cut(s) 2857, 4738, 8857, 9382, 10213, 10504
KspAI GTTAAC 1 cut(s) 7102
LguI GCTCTTC 2 cut(s) 2017, 2090
MabI ACCWGGT 1 cut(s) 12105
MbiI CCGCTC 2 cut(s) 1687, 11694
MfeI CAATTG 6 cut(s) 5087, 5223, 7658, 10862, 10874, 12267
Mly113I GGCGCC 2 cut(s) 7124, 11065
MmeI TCCRAC 8 cut(s) 1711, 2019, 4135, 4731, 7449, 10003, 10213, 10900
Mph1103I ATGCAT 3 cut(s) 5800, 7037, 8917
MroI TCCGGA 4 cut(s) 700, 3949, 4467, 6560
MroXI GAANNNNTTC 3 cut(s) 5760, 10642, 11079
MslI CAYNNNNRTG 6 cut(s) 1027, 3518, 3752, 4362, 4364, 5373
MspCI CTTAAG 4 cut(s) 76, 3065, 3598, 4208
MssI GTTTAAAC 1 cut(s) 1597
MunI CAATTG 6 cut(s) 5087, 5223, 7658, 10862, 10874, 12267
Mva1269I GAATGC 8 cut(s) 1098, 1702, 6411, 7426, 9658, 9899, 10642, 10854
MvnI CGCG 4 cut(s) 738, 9240, 9937, 11803
NarI GGCGCC 2 cut(s) 7124, 11065
NciI CCSGG 6 cut(s) 2222, 3179, 3180, 4252, 7014, 8384
NcoI CCATGG 3 cut(s) 206, 555, 11011
NdeI CATATG 6 cut(s) 3036, 5344, 6217, 7525, 11442, 11836
NheI GCTAGC 2 cut(s) 1709, 8287
NsbI TGCGCA 2 cut(s) 1245, 4582
NsiI ATGCAT 3 cut(s) 5800, 7037, 8917
NspI RCATGY 7 cut(s) 1250, 4399, 5932, 7704, 8627, 9727, 9928
NspV TTCGAA 2 cut(s) 6, 6728
OliI CACNNNNGTG 1 cut(s) 5373
PaeI GCATGC 1 cut(s) 1250
PaeR7I CTCGAG 2 cut(s) 5115, 9801
PagI TCATGA 8 cut(s) 646, 2382, 3223, 7954, 8317, 9862, 11047, 11071
PceI AGGCCT 1 cut(s) 7193
PciI ACATGT 1 cut(s) 4395
PciSI GCTCTTC 2 cut(s) 2017, 2090
PcsI WCGNNNNNNNCGW 1 cut(s) 12
PctI GAATGC 8 cut(s) 1098, 1702, 6411, 7426, 9658, 9899, 10642, 10854
PdmI GAANNNNTTC 3 cut(s) 5760, 10642, 11079
PflFI GACNNNGTC 5 cut(s) 2912, 3308, 7735, 7859, 11200
PflMI CCANNNNNTGG 1 cut(s) 6890
PfoI TCCNGGA 1 cut(s) 502
PinAI ACCGGT 3 cut(s) 2212, 11686, 12362
PluTI GGCGCC 2 cut(s) 7127, 11068
PmaCI CACGTG 2 cut(s) 7211, 9263
PmeI GTTTAAAC 1 cut(s) 1597
PmlI CACGTG 2 cut(s) 7211, 9263
Ppu21I YACGTR 4 cut(s) 7211, 9263, 11924, 12182
PpuMI RGGWCCY 1 cut(s) 6096
PscI ACATGT 1 cut(s) 4395
PshBI ATTAAT 3 cut(s) 2919, 9513, 11666
PsiI TTATAA 3 cut(s) 3501, 3968, 5429
Psp124BI GAGCTC 3 cut(s) 5400, 5830, 9870
Psp5II RGGWCCY 1 cut(s) 6096
PspCI CACGTG 2 cut(s) 7211, 9263
PspFI CCCAGC 4 cut(s) 3709, 8176, 9333, 12058
PspOMI GGGCCC 3 cut(s) 8173, 8509, 9349
PspPPI RGGWCCY 1 cut(s) 6096
PspXI VCTCGAGB 1 cut(s) 5115
PsrI GAACNNNNNNTAC 4 cut(s) 2634, 2656, 2666, 2688
PstI CTGCAG 4 cut(s) 2479, 3631, 4204, 4354
PstNI CAGNNNCTG 3 cut(s) 1871, 3308, 10599
PsyI GACNNNGTC 5 cut(s) 2912, 3308, 7735, 7859, 11200
PvuII CAGCTG 6 cut(s) 2435, 2906, 3362, 6887, 11678, 11875
RseI CAYNNNNRTG 6 cut(s) 1027, 3518, 3752, 4362, 4364, 5373
SacI GAGCTC 3 cut(s) 5400, 5830, 9870
SapI GCTCTTC 2 cut(s) 2017, 2090
ScaI AGTACT 3 cut(s) 3625, 7428, 9687
SexAI ACCWGGT 1 cut(s) 12105
SfoI GGCGCC 2 cut(s) 7125, 11066
Sfr274I CTCGAG 2 cut(s) 5115, 9801
SfuI TTCGAA 2 cut(s) 6, 6728
SgrAI CRCCGGYG 1 cut(s) 12362
SlaI CTCGAG 2 cut(s) 5115, 9801
SmaI CCCGGG 1 cut(s) 3180
SmiMI CAYNNNNRTG 6 cut(s) 1027, 3518, 3752, 4362, 4364, 5373
SpeI ACTAGT 4 cut(s) 2794, 7532, 9050, 9707
SphI GCATGC 1 cut(s) 1250
SseBI AGGCCT 1 cut(s) 7193
SspDI GGCGCC 2 cut(s) 7123, 11064
SspI AATATT 3 cut(s) 6900, 7114, 7509
SstI GAGCTC 3 cut(s) 5400, 5830, 9870
StuI AGGCCT 1 cut(s) 7193
TaqII GACCGA 4 cut(s) 481, 1562, 3695, 8844
TspMI CCCGGG 1 cut(s) 3178
Tth111I GACNNNGTC 5 cut(s) 2912, 3308, 7735, 7859, 11200
Van91I CCANNNNNTGG 1 cut(s) 6890
Vha464I CTTAAG 4 cut(s) 76, 3065, 3598, 4208
VneI GTGCAC 2 cut(s) 9971, 11430
VspI ATTAAT 3 cut(s) 2919, 9513, 11666
XagI CCTNNNNNAGG 1 cut(s) 6834
XbaI TCTAGA 2 cut(s) 5599, 9596
XceI RCATGY 7 cut(s) 1250, 4399, 5932, 7704, 8627, 9727, 9928
XcmI CCANNNNNNNNNTGG 4 cut(s) 1029, 6813, 7847, 10975
XhoI CTCGAG 2 cut(s) 5115, 9801
XmaI CCCGGG 1 cut(s) 3178
XmaJI CCTAGG 2 cut(s) 3874, 7085
XmiI GTMKAC 9 cut(s) 1719, 2635, 5302, 5498, 6752, 7332, 7537, 8966, 9840
XmnI GAANNNNTTC 3 cut(s) 5760, 10642, 11079
ZraI GACGTC 1 cut(s) 765
ZrmI AGTACT 3 cut(s) 3625, 7428, 9687
Zsp2I ATGCAT 3 cut(s) 5800, 7037, 8917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.