Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002232

Physical Location & Seq

Genomic Coordinates Reverse (-)

20221029 .. 20226055

Gene Structure 5027 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G54170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGAAGCCTGTTCTTCACTCGGGTTCTTCATCCAATGGATTTTCACACAGGAGATTTGAAAAGGAGGCATGGATGAATAACGCACAGCCTTCTGTTGACAATACAGAAAACGGTTGGGACGCTGAAAGTGTGGATACCCCTTCTCAGAAGCTGTTAGTGTATTTCACAACTTGTAATATTGGACATCAGGTAGAAGTTCATCTCAAAAATGGATCTGTTTACAGCGGCATATTTCATGCTGCTAATGTGGAGAAGGATTTTGGAATCATTTTGAAAATGGCATGCTTGATTAGGGATTCACGAGGAACCAAATCCCGTACTGTCAGCAAGCCATCTTCAAAGCTACTCAAAATCCCTGCTGACGAACTTGTGCAAGTTATAGCTAAGGACCTTCCTCTATCCAGCGATAGCGTCTCAGATTCTGTTCAGTGCGAGAAACCTTTAGAGCTGTTGACAGACTCTCTGATATCACAGTTTTATAATGTTGATTTGGAAAGAGAGCTGAAACCTTGGGTACCTGATGAAGATGTTCCAGACTGTTCAGATCTGGAGAATGTGTTTGATGATCCTTGGAAGAGGGGCTGGAATCAGTTTGAGGTCAATAAGACATTATTTGGAGTAACAAGCACTTTTGATGAGGAACTGTATACCACAAAACTTGAGAGAGGTCCTGGAACGAGGGAGCTAGAAGAGCAAGCCTTAAGGATTGCGAGAGAGATTGTGGGTGAGAATACCCGAGATATTCACGTAGCAGAGGAAAGAGGGCTCCAGCTTAGTGGAAAGTTTGATATTGATGAGGAAACCAAATACTCATCGGTCTGTGCGACTAATAGATTTGATGATACGTGTTATGAAGACGATGAAGAAGAAGAAGAAGATATATTATTGGATTGCTGCAACAATTTGACTTTTGGTGATTCTTCTGCTTCTGATGGCAAGGAACCTGCTTCAACTGGCAAATTCTATGAAGATTCATGGGGTGACAGCCTGCATTTACGGAGTAACAAAATGGTAGATCAGAGCTGGTCGAACTCAAATAAGCATACTCGCCAGCTTATGTCCGAACTGCCATCCAAAGATTTTCCTGTTGCAGGAAACAACATCAGGAATGAGAGCCAGCTTGGTGAGCAAAGAAAGAGCAAATTCCTAGGGGCTTCCCTTTTTAAAAAGCCATCTGAGGAATCAGTGTCTGGTTTTGAAGATGCACCACCACCTGTGAAGCCAAGTTTCATTGATGGAAGACTCGGTCTACTCTCTGACAGAGCAAAGTCTGAGAACTCTTCTGGGTGGCCTGGAAGCTCCATTTCTAGAAATTCAGAAAACTCTGCAGCTTCCTCAGCATCAAATCTTCCAATACTGTCACCAAGCTCTTCGGGTTCTTTATCATCAGAAAAATCCACACTCAACCCAAATGCTAAGGAATTTAAACTGAACCCTAACGCAAAGAGTTTCAAACCATCTCCATCAGCAACACGTCCTCAATCTCCTCAATCTCCAGTCTTTGACGGATCATTCTATTATCCTCCTGTTCCACCCATGCCAGGACTACATATTCGATACGGAACGGGAGCAGCATTCCCTGGGCAACAACACCCAATGATGTATAACAATACAACACAGCTTAGTCCGAATCAAACATATTATTCTCCAAATAGTCCACAGTACCCACAACCGATGATGGTTACTCAGCAGAGACCAATCTTGTTCATGCCGCCAACGCCATACCAACCGGAGATGCCATACAAAGGAAGAGACTCTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009987 GO:0010494 GO:0010603 GO:0016043 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0033043 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0065003 GO:0065007 GO:0070925 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1902115 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LsmAD PAM2 SM-ATX

Protein Analysis

587

Amino Acids

65.39

Weight (kDa)

4.99

Isoelectric Point (pI)

57.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SM-ATX	PF14438	52 - 129	1.5e-23	Ataxin 2 SM domain
LsmAD	PF06741	205 - 273	3.9e-24	LsmAD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54170 AT3G14010 AT3G14010 AT3G14010 AT3G14010 AT3G14010
fragaria_vesca	FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380
malus_domestica	MD09G1186100.v1.1 MD17G1171000.v1.1
prunus_persica	Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1
pyrus_communis	pycom09g10330 pycom12419g00200 pycom12419g00210
rosa_chinensis	RchiOBHm_Chr2g0110201 RchiOBHm_Chr2g0144721
rosa_laevigata	RLG00000020103
rosa_multiflora	Rmu_co8157946.1_g000001 Rmu_sc0013504.1_g000008 Rmu_sc0020351.1_g000001
rosa_roxburghii	Rroxscaffold_2G00101040 Rroxscaffold_3G00222660 Rroxscaffold_7G00205460
rosa_rugosa	Rorug02G0389100 Rorug02G0389100 Rorug02G0389200 Rorug02G0389300
rosa_samantha	Rh2AG440900 Rh2BG451300 Rh2CG220200 Rh2CG428200 Rh2DG461300 Rh3DG266300
rosa_wichuraiana	Rw2G021150 Rw2G036070 Rw7G020140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	480
Acc36I	ACCTGC	1 cut(s)	952
Acc65I	GGTACC	1 cut(s)	514
AccB1I	GGYRCC	1 cut(s)	514
AccI	GTMKAC	2 cut(s)	647, 1249
AciI	CCGC	2 cut(s)	225, 1712
AclWI	GGATC	3 cut(s)	220, 560, 1516
AcsI	RAATTY	4 cut(s)	959, 1142, 1312, 1421
AfaI	GTAC	3 cut(s)	319, 516, 1664
AfiI	CCNNNNNNNGG	3 cut(s)	1091, 1541, 1745
AflII	CTTAAG	1 cut(s)	700
AflIII	ACRYGT	2 cut(s)	845, 1472
AgsI	TTSAA	6 cut(s)	59, 274, 339, 951, 1199, 1453
AjiI	CACGTC	1 cut(s)	1475
AjnI	CCWGG	4 cut(s)	670, 1291, 1540, 1579
Alw26I	GTCTC	3 cut(s)	418, 1687, 1746
AlwI	GGATC	3 cut(s)	220, 560, 1516
AlwNI	CAGNNNCTG	3 cut(s)	151, 422, 1190
Ama87I	CYCGRG	2 cut(s)	19, 735
AoxI	GGCC	1 cut(s)	1289
ApeKI	GCWGC	4 cut(s)	239, 894, 1328, 1571
ApoI	RAATTY	4 cut(s)	959, 1142, 1312, 1421
ArsI	GACNNNNNNTTYG	2 cut(s)	1536, 1568
Asp700I	GAANNNNTTC	1 cut(s)	528
Asp718I	GGTACC	1 cut(s)	514
AspA2I	CCTAGG	1 cut(s)	1147
AspS9I	GGNCC	2 cut(s)	388, 668
AsuHPI	GGTGA	5 cut(s)	737, 926, 992, 1136, 1353
AvaI	CYCGRG	2 cut(s)	19, 735
AvaII	GGWCC	2 cut(s)	388, 668
AvrII	CCTAGG	1 cut(s)	1147
BanI	GGYRCC	1 cut(s)	514
BanII	GRGCYC	1 cut(s)	768
BauI	CACGAG	1 cut(s)	300
BbsI	GAAGAC	2 cut(s)	861, 1246
BbvCI	CCTCAGC	1 cut(s)	1336
BbvI	GCAGC	4 cut(s)	226, 881, 1340, 1583
BccI	CCATC	8 cut(s)	340, 926, 1078, 1180, 1229, 1465, 1471, 1672
BciT130I	CCWGG	4 cut(s)	672, 1293, 1542, 1581
BciVI	GTATCC	1 cut(s)	127
BcoDI	GTCTC	3 cut(s)	418, 1687, 1746
BfaI	CTAG	3 cut(s)	686, 1148, 1308
BfmI	CTRYAG	1 cut(s)	1326
BfrI	CTTAAG	1 cut(s)	700
BfuAI	ACCTGC	1 cut(s)	952
BfuI	GTATCC	1 cut(s)	127
BglII	AGATCT	1 cut(s)	544
BisI	GCNGC	6 cut(s)	226, 240, 895, 1329, 1572, 1712
BlnI	CCTAGG	1 cut(s)	1147
BlsI	GCNGC	6 cut(s)	227, 241, 896, 1330, 1573, 1713
Bme1390I	CCNGG	4 cut(s)	672, 1293, 1542, 1581
Bme18I	GGWCC	2 cut(s)	388, 668
BmeT110I	CYCGRG	2 cut(s)	19, 735
BmgBI	CACGTC	1 cut(s)	1475
BmgT120I	GGNCC	2 cut(s)	388, 668
BmiI	GGNNCC	4 cut(s)	307, 516, 767, 942
BmrFI	CCNGG	4 cut(s)	672, 1293, 1542, 1581
BmsI	GCATC	3 cut(s)	1192, 1349, 1725
BpiI	GAAGAC	2 cut(s)	861, 1246
BpmI	CTGGAG	3 cut(s)	569, 752, 1479
Bpu10I	CCTNAGC	3 cut(s)	384, 1336, 1416
BpuEI	CTTGAG	1 cut(s)	680
BsaAI	YACGTR	2 cut(s)	748, 846
BsaI	GGTCTC	1 cut(s)	1687
BsaJI	CCNNGG	5 cut(s)	509, 569, 1147, 1579, 1580
BsaWI	WCCGGW	1 cut(s)	1729
BsaXI	ACNNNNNCTCC	2 cut(s)	542, 572
Bsc4I	CCNNNNNNNGG	3 cut(s)	1091, 1541, 1745
Bse1I	ACTGG	2 cut(s)	958, 1496
BseBI	CCWGG	4 cut(s)	672, 1293, 1542, 1581
BseDI	CCNNGG	5 cut(s)	509, 569, 1147, 1579, 1580
BseGI	GGATG	3 cut(s)	29, 78, 1070
BseLI	CCNNNNNNNGG	3 cut(s)	1091, 1541, 1745
BseMII	CTCAG	6 cut(s)	158, 429, 1167, 1263, 1350, 1700
BseNI	ACTGG	2 cut(s)	958, 1496
BseRI	GAGGAG	1 cut(s)	1476
BseXI	GCAGC	4 cut(s)	226, 881, 1340, 1583
BshFI	GGCC	1 cut(s)	1291
BshNI	GGYRCC	1 cut(s)	514
BsiHKCI	CYCGRG	2 cut(s)	19, 735
BsiSI	CCGG	1 cut(s)	1730
BslFI	GGGAC	1 cut(s)	131
BslI	CCNNNNNNNGG	3 cut(s)	1091, 1541, 1745
BsmAI	GTCTC	3 cut(s)	418, 1687, 1746
BsmBI	CGTCTC	1 cut(s)	418
BsmFI	GGGAC	1 cut(s)	131
BsmI	GAATGC	1 cut(s)	1574
BsnI	GGCC	1 cut(s)	1291
Bso31I	GGTCTC	1 cut(s)	1687
BsoBI	CYCGRG	2 cut(s)	19, 735
Bsp1286I	GDGCHC	1 cut(s)	768
Bsp143I	GATC	5 cut(s)	212, 544, 565, 1015, 1508
BspACI	CCGC	2 cut(s)	225, 1712
BspANI	GGCC	1 cut(s)	1291
BspCNI	CTCAG	6 cut(s)	157, 428, 1168, 1264, 1349, 1699
BspLI	GGNNCC	4 cut(s)	307, 516, 767, 942
BspMAI	CTGCAG	1 cut(s)	1330
BspMI	ACCTGC	1 cut(s)	952
BspPI	GGATC	3 cut(s)	220, 560, 1516
BspQI	GCTCTTC	2 cut(s)	684, 1375
BspT107I	GGYRCC	1 cut(s)	514
BspTI	CTTAAG	1 cut(s)	700
BspTNI	GGTCTC	1 cut(s)	1687
BsrI	ACTGG	2 cut(s)	958, 1496
BssECI	CCNNGG	5 cut(s)	509, 569, 1147, 1579, 1580
BssMI	GATC	5 cut(s)	212, 544, 565, 1015, 1508
BssNAI	GTATAC	1 cut(s)	648
BssSI	CACGAG	1 cut(s)	300
BssT1I	CCWWGG	3 cut(s)	509, 569, 1147
Bst1107I	GTATAC	1 cut(s)	648
Bst2BI	CACGAG	1 cut(s)	300
Bst2UI	CCWGG	4 cut(s)	672, 1293, 1542, 1581
Bst4CI	ACNGT	7 cut(s)	113, 322, 474, 539, 645, 1359, 1662
Bst6I	CTCTTC	5 cut(s)	569, 684, 1285, 1375, 1744
BstAFI	CTTAAG	1 cut(s)	700
BstBAI	YACGTR	2 cut(s)	748, 846
BstC8I	GCNNGC	6 cut(s)	283, 329, 696, 989, 1052, 1118
BstENI	CCTNNNNNAGG	1 cut(s)	1089
BstF5I	GGATG	3 cut(s)	29, 78, 1070
BstKTI	GATC	5 cut(s)	215, 547, 568, 1018, 1511
BstMAI	GTCTC	3 cut(s)	418, 1687, 1746
BstMBI	GATC	5 cut(s)	212, 544, 565, 1015, 1508
BstMWI	GCNNNNNNNGC	4 cut(s)	691, 1126, 1337, 1717
BstNI	CCWGG	4 cut(s)	672, 1293, 1542, 1581
BstNSI	RCATGY	1 cut(s)	285
BstSCI	CCNGG	4 cut(s)	670, 1291, 1540, 1579
BstSFI	CTRYAG	1 cut(s)	1326
BstV1I	GCAGC	4 cut(s)	226, 881, 1340, 1583
BstV2I	GAAGAC	2 cut(s)	861, 1246
BstX2I	RGATCY	2 cut(s)	212, 544
BstXI	CCANNNNNNTGG	1 cut(s)	776
BstYI	RGATCY	2 cut(s)	212, 544
BstZ17I	GTATAC	1 cut(s)	648
BsuI	GTATCC	1 cut(s)	127
BsuRI	GGCC	1 cut(s)	1291
BtrI	CACGTC	1 cut(s)	1475
BtsCI	GGATG	3 cut(s)	29, 78, 1070
BtsIMutI	CAGTG	2 cut(s)	434, 1191
BveI	ACCTGC	1 cut(s)	952
Cac8I	GCNNGC	6 cut(s)	283, 329, 696, 989, 1052, 1118
CaiI	CAGNNNCTG	3 cut(s)	151, 422, 1190
Cfr13I	GGNCC	2 cut(s)	388, 668
CseI	GACGC	2 cut(s)	128, 400
Csp6I	GTAC	3 cut(s)	318, 515, 1663
CspCI	CAANNNNNGTGG	2 cut(s)	640, 675
CviAII	CATG	6 cut(s)	69, 236, 282, 975, 1537, 1708
CviQI	GTAC	3 cut(s)	318, 515, 1663
DpnI	GATC	5 cut(s)	214, 546, 567, 1017, 1510
DpnII	GATC	5 cut(s)	212, 544, 565, 1015, 1508
DraI	TTTAAA	2 cut(s)	1165, 1426
Eam1104I	CTCTTC	5 cut(s)	569, 684, 1285, 1375, 1744
EarI	CTCTTC	5 cut(s)	569, 684, 1285, 1375, 1744
Eco130I	CCWWGG	3 cut(s)	509, 569, 1147
Eco24I	GRGCYC	1 cut(s)	768
Eco31I	GGTCTC	1 cut(s)	1687
Eco32I	GATATC	1 cut(s)	468
Eco47I	GGWCC	2 cut(s)	388, 668
Eco88I	CYCGRG	2 cut(s)	19, 735
EcoNI	CCTNNNNNAGG	1 cut(s)	1089
EcoO109I	RGGNCCY	2 cut(s)	388, 668
EcoRII	CCWGG	4 cut(s)	670, 1291, 1540, 1579
EcoRV	GATATC	1 cut(s)	468
EcoT14I	CCWWGG	3 cut(s)	509, 569, 1147
EcoT38I	GRGCYC	1 cut(s)	768
ErhI	CCWWGG	3 cut(s)	509, 569, 1147
Esp3I	CGTCTC	1 cut(s)	418
FaeI	CATG	6 cut(s)	72, 239, 285, 978, 1540, 1711
FalI	AAGNNNNNCTT	1 cut(s)	1741
FaqI	GGGAC	1 cut(s)	131
FatI	CATG	6 cut(s)	68, 235, 281, 974, 1536, 1707
FblI	GTMKAC	2 cut(s)	647, 1249
Fnu4HI	GCNGC	6 cut(s)	226, 240, 895, 1329, 1572, 1712
FokI	GGATG	3 cut(s)	16, 85, 1057
FriOI	GRGCYC	1 cut(s)	768
Fsp4HI	GCNGC	6 cut(s)	226, 240, 895, 1329, 1572, 1712
FspBI	CTAG	3 cut(s)	686, 1148, 1308
GluI	GCNGC	6 cut(s)	226, 240, 895, 1329, 1572, 1712
GsuI	CTGGAG	3 cut(s)	569, 752, 1479
HaeIII	GGCC	1 cut(s)	1291
HapII	CCGG	1 cut(s)	1730
HgaI	GACGC	2 cut(s)	128, 400
Hin1II	CATG	6 cut(s)	72, 239, 285, 978, 1540, 1711
HincII	GTYRAC	2 cut(s)	97, 453
HindII	GTYRAC	2 cut(s)	97, 453
HpaII	CCGG	1 cut(s)	1730
HphI	GGTGA	5 cut(s)	737, 926, 992, 1136, 1353
Hpy166II	GTNNAC	6 cut(s)	97, 220, 453, 648, 1250, 1658
Hpy188III	TCNNGA	5 cut(s)	300, 533, 548, 1105, 1308
Hpy8I	GTNNAC	6 cut(s)	97, 220, 453, 648, 1250, 1658
HpyAV	CCTTC	4 cut(s)	99, 150, 247, 401
HpyCH4III	ACNGT	7 cut(s)	113, 322, 474, 539, 645, 1359, 1662
HpyCH4IV	ACGT	3 cut(s)	747, 845, 1474
HpyCH4V	TGCA	6 cut(s)	373, 897, 991, 1091, 1205, 1328
HpyF10VI	GCNNNNNNNGC	4 cut(s)	691, 1126, 1337, 1717
HpySE526I	ACGT	3 cut(s)	747, 845, 1474
Hsp92II	CATG	6 cut(s)	72, 239, 285, 978, 1540, 1711
KpnI	GGTACC	1 cut(s)	518
Kzo9I	GATC	5 cut(s)	212, 544, 565, 1015, 1508
LguI	GCTCTTC	2 cut(s)	684, 1375
LmnI	GCTCC	4 cut(s)	682, 771, 1304, 1568
Lsp1109I	GCAGC	4 cut(s)	226, 881, 1340, 1583
LweI	GCATC	3 cut(s)	1192, 1349, 1725
MaeI	CTAG	3 cut(s)	686, 1148, 1308
MaeII	ACGT	3 cut(s)	747, 845, 1474
MaeIII	GTNAC	5 cut(s)	619, 980, 1001, 1359, 1681
MalI	GATC	5 cut(s)	214, 546, 567, 1017, 1510
MboI	GATC	5 cut(s)	212, 544, 565, 1015, 1508
MflI	RGATCY	2 cut(s)	212, 544
MhlI	GDGCHC	1 cut(s)	768
MluCI	AATT	5 cut(s)	901, 959, 1142, 1312, 1421
MlyI	GAGTC	3 cut(s)	452, 1236, 1748
MroXI	GAANNNNTTC	1 cut(s)	528
MseI	TTAA	3 cut(s)	701, 1164, 1425
MspA1I	CMGCKG	1 cut(s)	225
MspCI	CTTAAG	1 cut(s)	700
MspI	CCGG	1 cut(s)	1730
MspR9I	CCNGG	4 cut(s)	672, 1293, 1542, 1581
Mva1269I	GAATGC	1 cut(s)	1574
MvaI	CCWGG	4 cut(s)	672, 1293, 1542, 1581
MwoI	GCNNNNNNNGC	4 cut(s)	691, 1126, 1337, 1717
NdeII	GATC	5 cut(s)	212, 544, 565, 1015, 1508
NlaIII	CATG	6 cut(s)	72, 239, 285, 978, 1540, 1711
NlaIV	GGNNCC	4 cut(s)	307, 516, 767, 942
NmuCI	GTSAC	2 cut(s)	980, 1359
NspI	RCATGY	1 cut(s)	285
PaeI	GCATGC	1 cut(s)	285
PasI	CCCWGGG	1 cut(s)	1580
PciSI	GCTCTTC	2 cut(s)	684, 1375
PcsI	WCGNNNNNNNCGW	1 cut(s)	821
PctI	GAATGC	1 cut(s)	1574
PdmI	GAANNNNTTC	1 cut(s)	528
PfeI	GAWTC	8 cut(s)	264, 296, 419, 586, 917, 971, 1181, 1630
PflFI	GACNNNGTC	1 cut(s)	1245
PfoI	TCCNGGA	1 cut(s)	670
PkrI	GCNGC	6 cut(s)	227, 241, 896, 1330, 1573, 1713
PleI	GAGTC	3 cut(s)	452, 1236, 1748
PpsI	GAGTC	3 cut(s)	452, 1236, 1748
Ppu21I	YACGTR	2 cut(s)	748, 846
PpuMI	RGGWCCY	2 cut(s)	388, 668
PsiI	TTATAA	1 cut(s)	480
Psp5II	RGGWCCY	2 cut(s)	388, 668
Psp6I	CCWGG	4 cut(s)	670, 1291, 1540, 1579
PspGI	CCWGG	4 cut(s)	670, 1291, 1540, 1579
PspN4I	GGNNCC	4 cut(s)	307, 516, 767, 942
PspPI	GGNCC	2 cut(s)	388, 668
PspPPI	RGGWCCY	2 cut(s)	388, 668
PstI	CTGCAG	1 cut(s)	1330
PstNI	CAGNNNCTG	3 cut(s)	151, 422, 1190
PsuI	RGATCY	2 cut(s)	212, 544
PsyI	GACNNNGTC	1 cut(s)	1245
RsaI	GTAC	3 cut(s)	319, 516, 1664
RsaNI	GTAC	3 cut(s)	318, 515, 1663
SapI	GCTCTTC	2 cut(s)	684, 1375
SaqAI	TTAA	3 cut(s)	701, 1164, 1425
SatI	GCNGC	6 cut(s)	226, 240, 895, 1329, 1572, 1712
Sau3AI	GATC	5 cut(s)	212, 544, 565, 1015, 1508
Sau96I	GGNCC	2 cut(s)	388, 668
SchI	GAGTC	3 cut(s)	452, 1236, 1748
ScrFI	CCNGG	4 cut(s)	672, 1293, 1542, 1581
SduI	GDGCHC	1 cut(s)	768
SfaNI	GCATC	3 cut(s)	1192, 1349, 1725
SfcI	CTRYAG	1 cut(s)	1326
SinI	GGWCC	2 cut(s)	388, 668
SmlI	CTYRAG	2 cut(s)	659, 700
SmoI	CTYRAG	2 cut(s)	659, 700
SphI	GCATGC	1 cut(s)	285
Sse9I	AATT	5 cut(s)	901, 959, 1142, 1312, 1421
SsiI	CCGC	2 cut(s)	225, 1712
SspI	AATATT	1 cut(s)	178
SspMI	CTAG	3 cut(s)	686, 1148, 1308
StyD4I	CCNGG	4 cut(s)	670, 1291, 1540, 1579
StyI	CCWWGG	3 cut(s)	509, 569, 1147
TaaI	ACNGT	7 cut(s)	113, 322, 474, 539, 645, 1359, 1662
TaiI	ACGT	3 cut(s)	750, 848, 1477
TaqI	TCGA	2 cut(s)	1028, 1555
TaqII	GACCGA	2 cut(s)	805, 1235
TasI	AATT	5 cut(s)	901, 959, 1142, 1312, 1421
TauI	GCSGC	2 cut(s)	228, 1714
TfiI	GAWTC	8 cut(s)	264, 296, 419, 586, 917, 971, 1181, 1630
Tru1I	TTAA	3 cut(s)	701, 1164, 1425
Tru9I	TTAA	3 cut(s)	701, 1164, 1425
TscAI	CASTG	2 cut(s)	434, 1191
TseFI	GTSAC	2 cut(s)	980, 1359
TseI	GCWGC	4 cut(s)	239, 894, 1328, 1571
Tsp45I	GTSAC	2 cut(s)	980, 1359
TspGWI	ACGGA	3 cut(s)	1012, 1521, 1575
TspRI	CASTG	2 cut(s)	434, 1191
Tth111I	GACNNNGTC	1 cut(s)	1245
Vha464I	CTTAAG	1 cut(s)	700
VpaK11BI	GGWCC	2 cut(s)	388, 668
XagI	CCTNNNNNAGG	1 cut(s)	1089
XapI	RAATTY	4 cut(s)	959, 1142, 1312, 1421
XbaI	TCTAGA	1 cut(s)	1307
XceI	RCATGY	1 cut(s)	285
XmaJI	CCTAGG	1 cut(s)	1147
XmiI	GTMKAC	2 cut(s)	647, 1249
XmnI	GAANNNNTTC	1 cut(s)	528
XspI	CTAG	3 cut(s)	686, 1148, 1308

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.