Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0002232

Physical Location & Seq

Genomic Coordinates Forward (+)

17517149 .. 17525057

Gene Structure 7909 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1171000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGAATACACAACAAGCTTTCCATCCTAAATCTTCTGCTAATGGTTTTGGCCGTCGAAGAGGTGAAAGAGAAGGGGCTCCTAGGGTCGAGAATAAGTCAAAGTCTGGAACAGCAAACCACAGCAGATTAACAAGCAGAAAATCTGGAAACTCTGAGAGTCCTTCACGTGATCGATTAGTATATATGACCACATGTCTTATTGGGCATAATGTGGAAGTGCAGGTGGAAAATGGATCTGTATACTCTGGAATATTTCATGCAACAAACGCTGAAAGGGACTTTGGAATCATCTTGAAAATGGCACGAATGATAAAGGATGGTTCTGTACGCGGACAAAAGTCTATGACAGAGTCGGTTAGCAAGGCTCCTTCAAAGACTTTAATTATACCTGCCAAGGAACTTGTCCAAGTTATTGCAAAGGATGTCTCAATAACGAGAGATGGATTGTTAAATGAGGTTCAGCATGAAAAACATCAGGACCTTATGATAGATTCCTTCATATCACAATCCCACCGTGGTGAGATGGATAGAGAGCTGGAACCGTGGGTACCTGATGAAGATGATCCACGTTGTCCTGAATTGGAAAATATATTTGATGGACAATGGAATAGGAACTGGGATCAGTTTGAAACAAATGAAACATTATTTGGGGTAAAAAGCACATTTGATGCGGACCTTTACACCACTAAACTTGAGAAAGGCCCTCAAACAAGAGAGTTGGAAAGGGAAGCTTTAAGAATAGCAAGGGAAATTGAGTGTGAGGATACACCTGATCTGCATATGGCAGAGGAAAGAGGCATTCACCTTTGTGGGGATATTGATGAGGAGACAAGATTCTCCTCTGTTTATCGGGGGGAAGTAGTTGATGATAGTGGATATGATGAAGATGAGGATATTTTGTTGGATTCACTTAATACTGAAACCTTTGGAGATTCTACTGGTTCTTTAAGGAAGAATTCAATTGACTGGACCACTGGAAAAAGAAACGATGGGGCGCCATCGAGCTCTTCATTTGTTGATTACACACAATGTTCTGAGTCAAATGGTGCCCCAGATTTAGGTCGCTCTGGATCTTATGACCATGCTAGACAGCTGGCATCAGAAACACCTTTCAAGAGCTTCCCCTGTACAGCTGGTGAAAGAAGTGAAAATAGAGAGGTGGATGCTACCGCTGAGTCTGTAGTAAAGCCGAAGCTAGCTGAAGACAATCAAACGTCAGAACCAGACGATTCACAGCCATCATTGATTGGGAAGGAAGATGTGTTTGATAAAGGGGGGTTATCCTCCAGTGCCACCTCTTATGCTTCTGCTCAGACTTCATCAAAAGGTCATGAGAAGATGGGTTCTAGTGACCCAGTAACTGGCAAATCACATGTTCAAACACAGACAGTAAATTCTCATGGACGACCTGGTAGTTCTGCATCTTCCAATTCGGAATTCCCAGCTACTGTCTCTTCTTCTGGTGGACCTGGTTTATCACCAAGCTCATCTATGGGTTCGTTGTCCTCTGAGAAGTCAACATTGAATCCCCATGCGAAGGAATTCAAATTCAATCCGCATGCAAAGAGTTTTGTTCCATCTCAAGCGCCTGTTAGGCCTCCATCCCCCGTGTCTGATGGCTCCTTCTATTATCCAACTAACGCACCTGCAGTACCACATATGCCGGGCATGCCTGTTGGCATTGGAGGTGGGCCCTCTTTTGGACACCAACCTGTTATGTTTAATCCACAGACAATGCAAGGACCCCAACCCTTTTTTCATCCAAATGGGCCTCAGTATGGGCAACAGATGCTTCTTGGCCATCCTAGGCAAGTCGTATACATGCCAAACTACCAACCTGAAATGCCTTACAAAGGACGAGATTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009987 GO:0010494 GO:0010603 GO:0016043 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0033043 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0065003 GO:0065007 GO:0070925 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1902115 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LsmAD PAM2 SM-ATX

Protein Analysis

623

Amino Acids

68.19

Weight (kDa)

5.29

Isoelectric Point (pI)

49.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SM-ATX	PF14438	56 - 140	3.3e-27	Ataxin 2 SM domain
LsmAD	PF06741	216 - 284	1.5e-21	LsmAD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54170 AT3G14010 AT3G14010 AT3G14010 AT3G14010 AT3G14010
fragaria_vesca	FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380
malus_domestica	MD09G1186100.v1.1 MD17G1171000.v1.1
prunus_persica	Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1
pyrus_communis	pycom09g10330 pycom12419g00200 pycom12419g00210
rosa_chinensis	RchiOBHm_Chr2g0110201 RchiOBHm_Chr2g0144721
rosa_laevigata	RLG00000020103
rosa_multiflora	Rmu_co8157946.1_g000001 Rmu_sc0013504.1_g000008 Rmu_sc0020351.1_g000001
rosa_roxburghii	Rroxscaffold_2G00101040 Rroxscaffold_3G00222660 Rroxscaffold_7G00205460
rosa_rugosa	Rorug02G0389100 Rorug02G0389100 Rorug02G0389200 Rorug02G0389300
rosa_samantha	Rh2AG440900 Rh2BG451300 Rh2CG220200 Rh2CG428200 Rh2DG461300 Rh3DG266300
rosa_wichuraiana	Rw2G021150 Rw2G036070 Rw7G020140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	211, 1654
Acc36I	ACCTGC	3 cut(s)	211, 397, 1654
Acc65I	GGTACC	1 cut(s)	547
AccB1I	GGYRCC	3 cut(s)	547, 994, 1046
AccB7I	CCANNNNNTGG	1 cut(s)	1361
AccI	GTMKAC	2 cut(s)	240, 1818
AccII	CGCG	1 cut(s)	330
AciI	CCGC	4 cut(s)	330, 671, 1170, 1556
AclWI	GGATC	4 cut(s)	241, 557, 627, 1078
AcoI	YGGCCR	2 cut(s)	49, 1798
AcsI	RAATTY	5 cut(s)	955, 1393, 1436, 1541, 1547
AcuI	CTGAAG	1 cut(s)	1221
AcvI	CACGTG	1 cut(s)	167
AcyI	GRCGYC	1 cut(s)	995
AfaI	GTAC	4 cut(s)	327, 549, 1129, 1653
AfiI	CCNNNNNNNGG	7 cut(s)	811, 1058, 1361, 1537, 1700, 1778, 1853
AflIII	ACRYGT	2 cut(s)	191, 1372
AgsI	TTSAA	9 cut(s)	295, 372, 629, 960, 1114, 1379, 1525, 1546, 1552
AhdI	GACNNNNNGTC	1 cut(s)	192
AjnI	CCWGG	2 cut(s)	1408, 1468
AjuI	GAANNNNNNNTTGG	8 cut(s)	264, 296, 630, 662, 1421, 1453, 1740, 1772
AleI	CACNNNNGTG	2 cut(s)	516, 807
Alw21I	GWGCWC	1 cut(s)	1007
Alw26I	GTCTC	3 cut(s)	430, 821, 1456
AlwI	GGATC	4 cut(s)	241, 557, 627, 1078
AlwNI	CAGNNNCTG	2 cut(s)	1361, 1448
AoxI	GGCC	6 cut(s)	49, 700, 1595, 1691, 1769, 1798
ApaI	GGGCCC	1 cut(s)	1695
ApoI	RAATTY	5 cut(s)	955, 1393, 1436, 1541, 1547
Asp700I	GAANNNNTTC	1 cut(s)	1541
Asp718I	GGTACC	1 cut(s)	547
AspA2I	CCTAGG	2 cut(s)	80, 1805
AspLEI	GCGC	2 cut(s)	997, 1588
AspS9I	GGNCC	9 cut(s)	478, 673, 701, 969, 1466, 1691, 1692, 1742, 1769
AsuC2I	CCSGG	1 cut(s)	1665
AsuHPI	GGTGA	5 cut(s)	74, 530, 794, 1148, 1470
AsuNHI	GCTAGC	1 cut(s)	1195
AvaII	GGWCC	5 cut(s)	478, 673, 969, 1466, 1742
AvrII	CCTAGG	2 cut(s)	80, 1805
BaeGI	GKGCMC	2 cut(s)	1051, 1695
BalI	TGGCCA	1 cut(s)	1800
BanI	GGYRCC	3 cut(s)	547, 994, 1046
BanII	GRGCYC	3 cut(s)	79, 1007, 1695
BbrPI	CACGTG	1 cut(s)	167
BbsI	GAAGAC	1 cut(s)	1209
Bbv12I	GWGCWC	1 cut(s)	1007
BceAI	ACGGC	1 cut(s)	36
BciT130I	CCWGG	2 cut(s)	1410, 1470
BciVI	GTATCC	1 cut(s)	757
BcnI	CCSGG	1 cut(s)	1665
BcoDI	GTCTC	3 cut(s)	430, 821, 1456
BfaI	CTAG	5 cut(s)	81, 1086, 1196, 1347, 1806
BfmI	CTRYAG	2 cut(s)	1179, 1647
BfoI	RGCGCY	2 cut(s)	998, 1589
BfuAI	ACCTGC	3 cut(s)	211, 397, 1654
BfuI	GTATCC	1 cut(s)	757
BglI	GCCNNNNNGGC	1 cut(s)	1594
BlnI	CCTAGG	2 cut(s)	80, 1805
Bme1390I	CCNGG	3 cut(s)	1410, 1470, 1665
Bme18I	GGWCC	5 cut(s)	478, 673, 969, 1466, 1742
BmeRI	GACNNNNNGTC	1 cut(s)	192
BmgT120I	GGNCC	9 cut(s)	478, 673, 701, 969, 1466, 1691, 1692, 1742, 1769
BmiI	GGNNCC	9 cut(s)	78, 366, 540, 549, 996, 1048, 1621, 1693, 1744
BmrFI	CCNGG	3 cut(s)	1410, 1470, 1665
BmrI	ACTGGG	2 cut(s)	625, 1349
BmsI	GCATC	5 cut(s)	658, 1106, 1153, 1430, 1779
BmtI	GCTAGC	1 cut(s)	1199
BmuI	ACTGGG	2 cut(s)	625, 1349
BoxI	GACNNNNGTC	1 cut(s)	337
BpiI	GAAGAC	1 cut(s)	1209
BpmI	CTGGAG	1 cut(s)	1270
BpuEI	CTTGAG	2 cut(s)	713, 1566
BpuMI	CCSGG	1 cut(s)	1665
Bsa29I	ATCGAT	1 cut(s)	172
BsaAI	YACGTR	1 cut(s)	167
BsaHI	GRCGYC	1 cut(s)	995
BsaJI	CCNNGG	5 cut(s)	80, 393, 514, 542, 1805
Bsc4I	CCNNNNNNNGG	7 cut(s)	811, 1058, 1361, 1537, 1700, 1778, 1853
Bse1I	ACTGG	7 cut(s)	620, 943, 971, 979, 1287, 1355, 1366
BseBI	CCWGG	2 cut(s)	1410, 1470
BseCI	ATCGAT	1 cut(s)	172
BseDI	CCNNGG	5 cut(s)	80, 393, 514, 542, 1805
BseGI	GGATG	7 cut(s)	22, 322, 427, 1168, 1601, 1759, 1801
BseLI	CCNNNNNNNGG	7 cut(s)	811, 1058, 1361, 1537, 1700, 1778, 1853
BseMII	CTCAG	6 cut(s)	144, 1026, 1164, 1325, 1500, 1787
BseNI	ACTGG	7 cut(s)	620, 943, 971, 979, 1287, 1355, 1366
BseRI	GAGGAG	2 cut(s)	829, 839
BseSI	GKGCMC	2 cut(s)	1051, 1695
BseYI	CCCAGC	1 cut(s)	1441
BsgI	GTGCAG	1 cut(s)	239
Bsh1236I	CGCG	1 cut(s)	330
BshFI	GGCC	6 cut(s)	51, 702, 1597, 1693, 1771, 1800
BshNI	GGYRCC	3 cut(s)	547, 994, 1046
BshVI	ATCGAT	1 cut(s)	172
BsiHKAI	GWGCWC	1 cut(s)	1007
BsiSI	CCGG	1 cut(s)	1664
BslFI	GGGAC	1 cut(s)	290
BslI	CCNNNNNNNGG	7 cut(s)	811, 1058, 1361, 1537, 1700, 1778, 1853
BsmAI	GTCTC	3 cut(s)	430, 821, 1456
BsmFI	GGGAC	1 cut(s)	290
BsmI	GAATGC	1 cut(s)	798
BsnI	GGCC	6 cut(s)	51, 702, 1597, 1693, 1771, 1800
Bsp120I	GGGCCC	1 cut(s)	1691
Bsp1286I	GDGCHC	4 cut(s)	79, 1007, 1051, 1695
Bsp1407I	TGTACA	1 cut(s)	1127
Bsp143I	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
BspACI	CCGC	4 cut(s)	330, 671, 1170, 1556
BspANI	GGCC	6 cut(s)	51, 702, 1597, 1693, 1771, 1800
BspCNI	CTCAG	6 cut(s)	145, 1027, 1165, 1324, 1501, 1786
BspDI	ATCGAT	1 cut(s)	172
BspFNI	CGCG	1 cut(s)	330
BspHI	TCATGA	1 cut(s)	1330
BspLI	GGNNCC	9 cut(s)	78, 366, 540, 549, 996, 1048, 1621, 1693, 1744
BspMAI	CTGCAG	1 cut(s)	1651
BspMI	ACCTGC	3 cut(s)	211, 397, 1654
BspOI	GCTAGC	1 cut(s)	1199
BspPI	GGATC	4 cut(s)	241, 557, 627, 1078
BspQI	GCTCTTC	1 cut(s)	1012
BspT107I	GGYRCC	3 cut(s)	547, 994, 1046
BsrGI	TGTACA	1 cut(s)	1127
BsrI	ACTGG	7 cut(s)	620, 943, 971, 979, 1287, 1355, 1366
BssECI	CCNNGG	5 cut(s)	80, 393, 514, 542, 1805
BssMI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
BssNAI	GTATAC	2 cut(s)	241, 1819
BssNI	GRCGYC	1 cut(s)	995
BssT1I	CCWWGG	3 cut(s)	80, 393, 1805
Bst1107I	GTATAC	2 cut(s)	241, 1819
Bst2UI	CCWGG	2 cut(s)	1410, 1470
Bst4CI	ACNGT	4 cut(s)	515, 543, 1390, 1450
Bst6I	CTCTTC	3 cut(s)	52, 1012, 1459
BstACI	GRCGYC	1 cut(s)	995
BstAPI	GCANNNNNTGC	1 cut(s)	1789
BstAUI	TGTACA	1 cut(s)	1127
BstBAI	YACGTR	1 cut(s)	167
BstC8I	GCNNGC	4 cut(s)	1095, 1197, 1560, 1670
BstDEI	CTNAG	6 cut(s)	153, 1035, 1173, 1311, 1509, 1773
BstDSI	CCRYGG	2 cut(s)	514, 542
BstENI	CCTNNNNNAGG	1 cut(s)	1851
BstF5I	GGATG	7 cut(s)	22, 322, 427, 1168, 1601, 1759, 1801
BstFNI	CGCG	1 cut(s)	330
BstH2I	RGCGCY	2 cut(s)	998, 1589
BstHHI	GCGC	2 cut(s)	997, 1588
BstKTI	GATC	6 cut(s)	172, 236, 565, 622, 775, 1073
BstMAI	GTCTC	3 cut(s)	430, 821, 1456
BstMBI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
BstMWI	GCNNNNNNNGC	4 cut(s)	266, 1594, 1669, 1789
BstNI	CCWGG	2 cut(s)	1410, 1470
BstNSI	RCATGY	5 cut(s)	195, 1376, 1562, 1672, 1825
BstPAI	GACNNNNGTC	1 cut(s)	337
BstSCI	CCNGG	3 cut(s)	1408, 1468, 1663
BstSFI	CTRYAG	2 cut(s)	1179, 1647
BstSLI	GKGCMC	2 cut(s)	1051, 1695
BstUI	CGCG	1 cut(s)	330
BstV2I	GAAGAC	1 cut(s)	1209
BstX2I	RGATCY	2 cut(s)	233, 1070
BstYI	RGATCY	2 cut(s)	233, 1070
BstZ17I	GTATAC	2 cut(s)	241, 1819
Bsu15I	ATCGAT	1 cut(s)	172
BsuI	GTATCC	1 cut(s)	757
BsuRI	GGCC	6 cut(s)	51, 702, 1597, 1693, 1771, 1800
BsuTUI	ATCGAT	1 cut(s)	172
BtgI	CCRYGG	2 cut(s)	514, 542
BtsCI	GGATG	7 cut(s)	22, 322, 427, 1168, 1601, 1759, 1801
BtsIMutI	CAGTG	2 cut(s)	972, 1294
BveI	ACCTGC	3 cut(s)	211, 397, 1654
Cac8I	GCNNGC	4 cut(s)	1095, 1197, 1560, 1670
CaiI	CAGNNNCTG	2 cut(s)	1361, 1448
CciI	TCATGA	1 cut(s)	1330
CfoI	GCGC	2 cut(s)	997, 1588
Cfr13I	GGNCC	9 cut(s)	478, 673, 701, 969, 1466, 1691, 1692, 1742, 1769
ClaI	ATCGAT	1 cut(s)	172
CsiI	ACCWGGT	2 cut(s)	1408, 1468
Csp6I	GTAC	4 cut(s)	326, 548, 1128, 1652
CspCI	CAANNNNNGTGG	2 cut(s)	673, 708
CviQI	GTAC	4 cut(s)	326, 548, 1128, 1652
DdeI	CTNAG	6 cut(s)	153, 1035, 1173, 1311, 1509, 1773
DinI	GGCGCC	1 cut(s)	996
DpnI	GATC	6 cut(s)	171, 235, 564, 621, 774, 1072
DpnII	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
DriI	GACNNNNNGTC	1 cut(s)	192
EaeI	YGGCCR	2 cut(s)	49, 1798
Eam1104I	CTCTTC	3 cut(s)	52, 1012, 1459
Eam1105I	GACNNNNNGTC	1 cut(s)	192
EarI	CTCTTC	3 cut(s)	52, 1012, 1459
Ecl136II	GAGCTC	1 cut(s)	1005
Eco130I	CCWWGG	3 cut(s)	80, 393, 1805
Eco147I	AGGCCT	1 cut(s)	1597
Eco24I	GRGCYC	3 cut(s)	79, 1007, 1695
Eco47I	GGWCC	5 cut(s)	478, 673, 969, 1466, 1742
Eco53kI	GAGCTC	1 cut(s)	1005
Eco57I	CTGAAG	1 cut(s)	1221
Eco72I	CACGTG	1 cut(s)	167
EcoICRI	GAGCTC	1 cut(s)	1005
EcoNI	CCTNNNNNAGG	1 cut(s)	1851
EcoO109I	RGGNCCY	4 cut(s)	478, 701, 1692, 1742
EcoRI	GAATTC	3 cut(s)	955, 1436, 1541
EcoRII	CCWGG	2 cut(s)	1408, 1468
EcoT14I	CCWWGG	3 cut(s)	80, 393, 1805
EcoT38I	GRGCYC	3 cut(s)	79, 1007, 1695
EgeI	GGCGCC	1 cut(s)	996
EheI	GGCGCC	1 cut(s)	996
ErhI	CCWWGG	3 cut(s)	80, 393, 1805
FalI	AAGNNNNNCTT	2 cut(s)	715, 747
FaqI	GGGAC	1 cut(s)	290
FauNDI	CATATG	2 cut(s)	780, 1659
FblI	GTMKAC	2 cut(s)	240, 1818
FokI	GGATG	7 cut(s)	9, 329, 434, 1175, 1588, 1746, 1788
FriOI	GRGCYC	3 cut(s)	79, 1007, 1695
FspBI	CTAG	5 cut(s)	81, 1086, 1196, 1347, 1806
GlaI	GCGC	2 cut(s)	996, 1587
GsaI	CCCAGC	1 cut(s)	1445
GsuI	CTGGAG	1 cut(s)	1270
HaeII	RGCGCY	2 cut(s)	998, 1589
HaeIII	GGCC	6 cut(s)	51, 702, 1597, 1693, 1771, 1800
HapII	CCGG	1 cut(s)	1664
HhaI	GCGC	2 cut(s)	997, 1588
Hin1I	GRCGYC	1 cut(s)	995
Hin6I	GCGC	2 cut(s)	995, 1586
HinP1I	GCGC	2 cut(s)	995, 1586
HincII	GTYRAC	1 cut(s)	1518
HindII	GTYRAC	1 cut(s)	1518
HindIII	AAGCTT	2 cut(s)	15, 729
HpaII	CCGG	1 cut(s)	1664
HphI	GGTGA	5 cut(s)	74, 530, 794, 1148, 1470
Hpy166II	GTNNAC	4 cut(s)	241, 1466, 1518, 1819
Hpy188I	TCNGA	8 cut(s)	154, 1036, 1102, 1219, 1314, 1435, 1510, 1615
Hpy8I	GTNNAC	4 cut(s)	241, 1466, 1518, 1819
Hpy99I	CGWCG	1 cut(s)	57
HpyAV	CCTTC	7 cut(s)	65, 171, 378, 505, 1246, 1531, 1633
HpyCH4III	ACNGT	4 cut(s)	515, 543, 1390, 1450
HpyCH4IV	ACGT	3 cut(s)	166, 568, 1214
HpyCH4V	TGCA	8 cut(s)	220, 260, 416, 778, 1421, 1562, 1649, 1738
HpyF10VI	GCNNNNNNNGC	4 cut(s)	266, 1594, 1669, 1789
HpyF3I	CTNAG	6 cut(s)	153, 1035, 1173, 1311, 1509, 1773
HpySE526I	ACGT	3 cut(s)	166, 568, 1214
Hsp92I	GRCGYC	1 cut(s)	995
HspAI	GCGC	2 cut(s)	995, 1586
KasI	GGCGCC	1 cut(s)	994
KpnI	GGTACC	1 cut(s)	551
Kzo9I	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
LguI	GCTCTTC	1 cut(s)	1012
LmnI	GCTCC	3 cut(s)	82, 370, 1625
LweI	GCATC	5 cut(s)	658, 1106, 1153, 1430, 1779
MabI	ACCWGGT	2 cut(s)	1408, 1468
MaeI	CTAG	5 cut(s)	81, 1086, 1196, 1347, 1806
MaeII	ACGT	3 cut(s)	166, 568, 1214
MaeIII	GTNAC	2 cut(s)	1349, 1357
MalI	GATC	6 cut(s)	171, 235, 564, 621, 774, 1072
MboI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
MfeI	CAATTG	1 cut(s)	960
MflI	RGATCY	2 cut(s)	233, 1070
MhlI	GDGCHC	4 cut(s)	79, 1007, 1051, 1695
MlsI	TGGCCA	1 cut(s)	1800
MluNI	TGGCCA	1 cut(s)	1800
Mly113I	GGCGCC	1 cut(s)	995
MlyI	GAGTC	4 cut(s)	166, 359, 1046, 1184
MmeI	TCCRAC	3 cut(s)	699, 882, 1658
Mox20I	TGGCCA	1 cut(s)	1800
MroXI	GAANNNNTTC	1 cut(s)	1541
MscI	TGGCCA	1 cut(s)	1800
MseI	TTAA	8 cut(s)	128, 380, 449, 734, 912, 947, 1722, 1867
MslI	CAYNNNNRTG	3 cut(s)	516, 807, 1764
Msp20I	TGGCCA	1 cut(s)	1800
MspA1I	CMGCKG	3 cut(s)	1093, 1133, 1172
MspI	CCGG	1 cut(s)	1664
MspR9I	CCNGG	3 cut(s)	1410, 1470, 1665
MunI	CAATTG	1 cut(s)	960
Mva1269I	GAATGC	1 cut(s)	798
MvaI	CCWGG	2 cut(s)	1410, 1470
MvnI	CGCG	1 cut(s)	330
MwoI	GCNNNNNNNGC	4 cut(s)	266, 1594, 1669, 1789
NarI	GGCGCC	1 cut(s)	995
NciI	CCSGG	1 cut(s)	1665
NdeI	CATATG	2 cut(s)	780, 1659
NdeII	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
NheI	GCTAGC	1 cut(s)	1195
NlaIV	GGNNCC	9 cut(s)	78, 366, 540, 549, 996, 1048, 1621, 1693, 1744
NmuCI	GTSAC	1 cut(s)	1349
NspI	RCATGY	5 cut(s)	195, 1376, 1562, 1672, 1825
OliI	CACNNNNGTG	2 cut(s)	516, 807
PaeI	GCATGC	2 cut(s)	1562, 1672
PagI	TCATGA	1 cut(s)	1330
PaqCI	CACCTGC	2 cut(s)	211, 1654
PceI	AGGCCT	1 cut(s)	1597
PciI	ACATGT	2 cut(s)	191, 1372
PciSI	GCTCTTC	1 cut(s)	1012
PctI	GAATGC	1 cut(s)	798
PdmI	GAANNNNTTC	1 cut(s)	1541
PfeI	GAWTC	7 cut(s)	285, 491, 834, 905, 932, 1229, 1525
PflFI	GACNNNGTC	1 cut(s)	349
PflMI	CCANNNNNTGG	1 cut(s)	1361
PleI	GAGTC	4 cut(s)	165, 358, 1045, 1183
PluTI	GGCGCC	1 cut(s)	998
PmaCI	CACGTG	1 cut(s)	167
PmlI	CACGTG	1 cut(s)	167
PpsI	GAGTC	4 cut(s)	165, 358, 1045, 1183
Ppu21I	YACGTR	1 cut(s)	167
PpuMI	RGGWCCY	2 cut(s)	478, 1742
PscI	ACATGT	2 cut(s)	191, 1372
PshAI	GACNNNNGTC	1 cut(s)	337
Psp124BI	GAGCTC	1 cut(s)	1007
Psp5II	RGGWCCY	2 cut(s)	478, 1742
Psp6I	CCWGG	2 cut(s)	1408, 1468
PspCI	CACGTG	1 cut(s)	167
PspFI	CCCAGC	1 cut(s)	1441
PspGI	CCWGG	2 cut(s)	1408, 1468
PspN4I	GGNNCC	9 cut(s)	78, 366, 540, 549, 996, 1048, 1621, 1693, 1744
PspOMI	GGGCCC	1 cut(s)	1691
PspPI	GGNCC	9 cut(s)	478, 673, 701, 969, 1466, 1691, 1692, 1742, 1769
PspPPI	RGGWCCY	2 cut(s)	478, 1742
PsrI	GAACNNNNNNTAC	2 cut(s)	531, 563
PstI	CTGCAG	1 cut(s)	1651
PstNI	CAGNNNCTG	2 cut(s)	1361, 1448
PsuI	RGATCY	2 cut(s)	233, 1070
PsyI	GACNNNGTC	1 cut(s)	349
PvuII	CAGCTG	2 cut(s)	1093, 1133
RsaI	GTAC	4 cut(s)	327, 549, 1129, 1653
RsaNI	GTAC	4 cut(s)	326, 548, 1128, 1652
RseI	CAYNNNNRTG	3 cut(s)	516, 807, 1764
SacI	GAGCTC	1 cut(s)	1007
SapI	GCTCTTC	1 cut(s)	1012
SaqAI	TTAA	8 cut(s)	128, 380, 449, 734, 912, 947, 1722, 1867
Sau3AI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
Sau96I	GGNCC	9 cut(s)	478, 673, 701, 969, 1466, 1691, 1692, 1742, 1769
SchI	GAGTC	4 cut(s)	166, 359, 1046, 1184
ScrFI	CCNGG	3 cut(s)	1410, 1470, 1665
SduI	GDGCHC	4 cut(s)	79, 1007, 1051, 1695
SexAI	ACCWGGT	2 cut(s)	1408, 1468
SfaNI	GCATC	5 cut(s)	658, 1106, 1153, 1430, 1779
SfcI	CTRYAG	2 cut(s)	1179, 1647
SfoI	GGCGCC	1 cut(s)	996
SinI	GGWCC	5 cut(s)	478, 673, 969, 1466, 1742
SmiMI	CAYNNNNRTG	3 cut(s)	516, 807, 1764
SmlI	CTYRAG	2 cut(s)	692, 1581
SmoI	CTYRAG	2 cut(s)	692, 1581
SphI	GCATGC	2 cut(s)	1562, 1672
SseBI	AGGCCT	1 cut(s)	1597
SsiI	CCGC	4 cut(s)	330, 671, 1170, 1556
SspDI	GGCGCC	1 cut(s)	994
SspI	AATATT	1 cut(s)	252
SspMI	CTAG	5 cut(s)	81, 1086, 1196, 1347, 1806
SstI	GAGCTC	1 cut(s)	1007
StuI	AGGCCT	1 cut(s)	1597
StyD4I	CCNGG	3 cut(s)	1408, 1468, 1663
StyI	CCWWGG	3 cut(s)	80, 393, 1805
TaaI	ACNGT	4 cut(s)	515, 543, 1390, 1450
TaiI	ACGT	3 cut(s)	169, 571, 1217
TaqI	TCGA	4 cut(s)	55, 87, 172, 1001
TatI	WGTACW	1 cut(s)	1127
TfiI	GAWTC	7 cut(s)	285, 491, 834, 905, 932, 1229, 1525
Tru1I	TTAA	8 cut(s)	128, 380, 449, 734, 912, 947, 1722, 1867
Tru9I	TTAA	8 cut(s)	128, 380, 449, 734, 912, 947, 1722, 1867
TscAI	CASTG	2 cut(s)	979, 1294
TseFI	GTSAC	1 cut(s)	1349
Tsp45I	GTSAC	1 cut(s)	1349
TspRI	CASTG	2 cut(s)	979, 1294
Tth111I	GACNNNGTC	1 cut(s)	349
Van91I	CCANNNNNTGG	1 cut(s)	1361
VpaK11BI	GGWCC	5 cut(s)	478, 673, 969, 1466, 1742
XagI	CCTNNNNNAGG	1 cut(s)	1851
XapI	RAATTY	5 cut(s)	955, 1393, 1436, 1541, 1547
XceI	RCATGY	5 cut(s)	195, 1376, 1562, 1672, 1825
XmaJI	CCTAGG	2 cut(s)	80, 1805
XmiI	GTMKAC	2 cut(s)	240, 1818
XmnI	GAANNNNTTC	1 cut(s)	1541
XspI	CTAG	5 cut(s)	81, 1086, 1196, 1347, 1806

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.