Polyadenylate-binding protein-interacting protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G54170 AT3G14010 AT3G14010 AT3G14010 AT3G14010 AT3G14010 |
| fragaria_vesca | FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 |
| malus_domestica | MD09G1186100.v1.1 MD17G1171000.v1.1 |
| prunus_persica | Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1 |
| pyrus_communis | pycom09g10330 pycom12419g00200 pycom12419g00210 |
| rosa_chinensis | RchiOBHm_Chr2g0110201 RchiOBHm_Chr2g0144721 |
| rosa_laevigata | RLG00000020103 |
| rosa_multiflora | Rmu_co8157946.1_g000001 Rmu_sc0013504.1_g000008 Rmu_sc0020351.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00101040 Rroxscaffold_3G00222660 Rroxscaffold_7G00205460 |
| rosa_rugosa | Rorug02G0389100 Rorug02G0389100 Rorug02G0389200 Rorug02G0389300 |
| rosa_samantha | Rh2AG440900 Rh2BG451300 Rh2CG220200 Rh2CG428200 Rh2DG461300 Rh3DG266300 |
| rosa_wichuraiana | Rw2G021150 Rw2G036070 Rw7G020140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 389 |
| Acc36I | ACCTGC | 1 cut(s) | 403 |
| AccB1I | GGYRCC | 1 cut(s) | 140 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1385 |
| AciI | CCGC | 4 cut(s) | 517, 882, 1204, 1671 |
| AclI | AACGTT | 1 cut(s) | 1544 |
| AclWI | GGATC | 5 cut(s) | 234, 247, 563, 633, 687 |
| AcoI | YGGCCR | 2 cut(s) | 49, 1822 |
| AcsI | RAATTY | 3 cut(s) | 820, 1417, 1565 |
| AcuI | CTGAAG | 1 cut(s) | 1515 |
| AcvI | CACGTG | 2 cut(s) | 173, 198 |
| AfaI | GTAC | 3 cut(s) | 1048, 1144, 1677 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 868, 975, 1385, 1484, 1561, 1802, 1877 |
| AflIII | ACRYGT | 2 cut(s) | 197, 1396 |
| AgsI | TTSAA | 8 cut(s) | 301, 635, 957, 974, 1129, 1403, 1549, 1570 |
| AjnI | CCWGG | 3 cut(s) | 225, 1432, 1492 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 270, 302, 636, 668, 1764, 1796 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 537, 569 |
| AluBI | AGCT | 9 cut(s) | 80, 541, 1004, 1108, 1148, 1214, 1325, 1509, 1854 |
| AluI | AGCT | 9 cut(s) | 80, 541, 1004, 1108, 1148, 1214, 1325, 1509, 1854 |
| Alw21I | GWGCWC | 2 cut(s) | 668, 1006 |
| Alw26I | GTCTC | 4 cut(s) | 436, 764, 833, 1878 |
| AlwI | GGATC | 5 cut(s) | 234, 247, 563, 633, 687 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1255, 1385 |
| AoxI | GGCC | 6 cut(s) | 49, 1430, 1489, 1619, 1793, 1822 |
| ApeKI | GCWGC | 2 cut(s) | 1249, 1472 |
| ApoI | RAATTY | 3 cut(s) | 820, 1417, 1565 |
| AspA2I | CCTAGG | 1 cut(s) | 1829 |
| AspLEI | GCGC | 1 cut(s) | 1612 |
| AspS9I | GGNCC | 6 cut(s) | 553, 707, 1376, 1490, 1715, 1793 |
| AsuC2I | CCSGG | 3 cut(s) | 863, 1631, 1689 |
| AsuHPI | GGTGA | 8 cut(s) | 74, 241, 536, 776, 800, 878, 1163, 1494 |
| AsuNHI | GCTAGC | 1 cut(s) | 1210 |
| AvaII | GGWCC | 4 cut(s) | 553, 707, 1376, 1715 |
| AvrII | CCTAGG | 1 cut(s) | 1829 |
| BalI | TGGCCA | 1 cut(s) | 1824 |
| BamHI | GGATCC | 1 cut(s) | 239 |
| BanI | GGYRCC | 1 cut(s) | 140 |
| BanII | GRGCYC | 1 cut(s) | 1006 |
| BbrPI | CACGTG | 2 cut(s) | 173, 198 |
| BbsI | GAAGAC | 1 cut(s) | 1521 |
| Bbv12I | GWGCWC | 2 cut(s) | 668, 1006 |
| BbvCI | CCTCAGC | 1 cut(s) | 1215 |
| BbvI | GCAGC | 2 cut(s) | 1261, 1459 |
| BccI | CCATC | 9 cut(s) | 317, 382, 440, 523, 596, 1021, 1609, 1633, 1634 |
| BceAI | ACGGC | 3 cut(s) | 36, 504, 1445 |
| BciT130I | CCWGG | 3 cut(s) | 227, 1434, 1494 |
| BcnI | CCSGG | 3 cut(s) | 863, 1631, 1689 |
| BcoDI | GTCTC | 4 cut(s) | 436, 764, 833, 1878 |
| BfaI | CTAG | 5 cut(s) | 81, 1101, 1211, 1359, 1830 |
| BfmI | CTRYAG | 1 cut(s) | 1194 |
| BfoI | RGCGCY | 1 cut(s) | 1613 |
| BfuAI | ACCTGC | 1 cut(s) | 403 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1618 |
| BisI | GCNGC | 2 cut(s) | 1250, 1473 |
| BlnI | CCTAGG | 1 cut(s) | 1829 |
| BlsI | GCNGC | 2 cut(s) | 1251, 1474 |
| Bme1390I | CCNGG | 6 cut(s) | 227, 863, 1434, 1494, 1631, 1689 |
| Bme18I | GGWCC | 4 cut(s) | 553, 707, 1376, 1715 |
| BmgT120I | GGNCC | 6 cut(s) | 553, 707, 1376, 1490, 1715, 1793 |
| BmrFI | CCNGG | 6 cut(s) | 227, 863, 1434, 1494, 1631, 1689 |
| BmrI | ACTGGG | 2 cut(s) | 631, 1134 |
| BmsI | GCATC | 8 cut(s) | 220, 904, 1121, 1197, 1264, 1454, 1803, 1857 |
| BmtI | GCTAGC | 1 cut(s) | 1214 |
| BmuI | ACTGGG | 2 cut(s) | 631, 1134 |
| BoxI | GACNNNNGTC | 1 cut(s) | 343 |
| BpiI | GAAGAC | 1 cut(s) | 1521 |
| BpmI | CTGGAG | 2 cut(s) | 1305, 1506 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1215, 1560 |
| BpuEI | CTTGAG | 3 cut(s) | 719, 990, 1590 |
| BpuMI | CCSGG | 3 cut(s) | 863, 1631, 1689 |
| Bsa29I | ATCGAT | 1 cut(s) | 178 |
| BsaAI | YACGTR | 4 cut(s) | 173, 198, 335, 920 |
| BsaBI | GATNNNNATC | 1 cut(s) | 678 |
| BsaJI | CCNNGG | 6 cut(s) | 520, 548, 862, 1492, 1629, 1829 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 69, 99, 993, 1023 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 868, 975, 1385, 1484, 1561, 1802, 1877 |
| Bse1I | ACTGG | 7 cut(s) | 142, 591, 626, 985, 1140, 1379, 1390 |
| Bse8I | GATNNNNATC | 1 cut(s) | 678 |
| BseBI | CCWGG | 3 cut(s) | 227, 1434, 1494 |
| BseCI | ATCGAT | 1 cut(s) | 178 |
| BseDI | CCNNGG | 6 cut(s) | 520, 548, 862, 1492, 1629, 1829 |
| BseGI | GGATG | 8 cut(s) | 328, 433, 451, 901, 919, 1212, 1625, 1783 |
| BseJI | GATNNNNATC | 1 cut(s) | 678 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 868, 975, 1385, 1484, 1561, 1802, 1877 |
| BseMII | CTCAG | 4 cut(s) | 1179, 1206, 1811, 1854 |
| BseNI | ACTGG | 7 cut(s) | 142, 591, 626, 985, 1140, 1379, 1390 |
| BseRI | GAGGAG | 3 cut(s) | 782, 841, 851 |
| BseXI | GCAGC | 2 cut(s) | 1261, 1459 |
| BsgI | GTGCAG | 1 cut(s) | 1458 |
| BshFI | GGCC | 6 cut(s) | 51, 1432, 1491, 1621, 1795, 1824 |
| BshNI | GGYRCC | 1 cut(s) | 140 |
| BshVI | ATCGAT | 1 cut(s) | 178 |
| BsiHKAI | GWGCWC | 2 cut(s) | 668, 1006 |
| BsiSI | CCGG | 4 cut(s) | 862, 1328, 1631, 1688 |
| BslFI | GGGAC | 1 cut(s) | 539 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 868, 975, 1385, 1484, 1561, 1802, 1877 |
| BsmAI | GTCTC | 4 cut(s) | 436, 764, 833, 1878 |
| BsmFI | GGGAC | 1 cut(s) | 539 |
| BsmI | GAATGC | 1 cut(s) | 804 |
| BsnI | GGCC | 6 cut(s) | 51, 1432, 1491, 1621, 1795, 1824 |
| Bsp1286I | GDGCHC | 2 cut(s) | 668, 1006 |
| Bsp143I | GATC | 7 cut(s) | 125, 175, 239, 568, 625, 679, 778 |
| BspACI | CCGC | 4 cut(s) | 517, 882, 1204, 1671 |
| BspANI | GGCC | 6 cut(s) | 51, 1432, 1491, 1621, 1795, 1824 |
| BspCNI | CTCAG | 4 cut(s) | 1180, 1207, 1810, 1855 |
| BspDI | ATCGAT | 1 cut(s) | 178 |
| BspHI | TCATGA | 2 cut(s) | 481, 1345 |
| BspMI | ACCTGC | 1 cut(s) | 403 |
| BspOI | GCTAGC | 1 cut(s) | 1214 |
| BspPI | GGATC | 5 cut(s) | 234, 247, 563, 633, 687 |
| BspT107I | GGYRCC | 1 cut(s) | 140 |
| BsrI | ACTGG | 7 cut(s) | 142, 591, 626, 985, 1140, 1379, 1390 |
| BssECI | CCNNGG | 6 cut(s) | 520, 548, 862, 1492, 1629, 1829 |
| BssMI | GATC | 7 cut(s) | 125, 175, 239, 568, 625, 679, 778 |
| BssT1I | CCWWGG | 1 cut(s) | 1829 |
| Bst2UI | CCWGG | 3 cut(s) | 227, 1434, 1494 |
| Bst4CI | ACNGT | 6 cut(s) | 19, 44, 102, 549, 1125, 1414 |
| Bst6I | CTCTTC | 2 cut(s) | 52, 1346 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1255, 1472, 1813 |
| BstBAI | YACGTR | 4 cut(s) | 173, 198, 335, 920 |
| BstC8I | GCNNGC | 6 cut(s) | 310, 368, 1110, 1212, 1694, 1764 |
| BstDEI | CTNAG | 5 cut(s) | 1188, 1215, 1560, 1797, 1863 |
| BstDSI | CCRYGG | 2 cut(s) | 520, 548 |
| BstF5I | GGATG | 8 cut(s) | 328, 433, 451, 901, 919, 1212, 1625, 1783 |
| BstH2I | RGCGCY | 1 cut(s) | 1613 |
| BstHHI | GCGC | 1 cut(s) | 1612 |
| BstKTI | GATC | 7 cut(s) | 128, 178, 242, 571, 628, 682, 781 |
| BstMAI | GTCTC | 4 cut(s) | 436, 764, 833, 1878 |
| BstMBI | GATC | 7 cut(s) | 125, 175, 239, 568, 625, 679, 778 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 272, 1255, 1472, 1618, 1693, 1772, 1813 |
| BstNI | CCWGG | 3 cut(s) | 227, 1434, 1494 |
| BstNSI | RCATGY | 3 cut(s) | 1400, 1696, 1849 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 343 |
| BstSCI | CCNGG | 6 cut(s) | 225, 861, 1432, 1492, 1629, 1687 |
| BstSFI | CTRYAG | 1 cut(s) | 1194 |
| BstV1I | GCAGC | 2 cut(s) | 1261, 1459 |
| BstV2I | GAAGAC | 1 cut(s) | 1521 |
| BstX2I | RGATCY | 2 cut(s) | 239, 679 |
| BstYI | RGATCY | 2 cut(s) | 239, 679 |
| Bsu15I | ATCGAT | 1 cut(s) | 178 |
| BsuRI | GGCC | 6 cut(s) | 51, 1432, 1491, 1621, 1795, 1824 |
| BsuTUI | ATCGAT | 1 cut(s) | 178 |
| BtgI | CCRYGG | 2 cut(s) | 520, 548 |
| BtsCI | GGATG | 8 cut(s) | 328, 433, 451, 901, 919, 1212, 1625, 1783 |
| BtsI | GCAGTG | 2 cut(s) | 1165, 1253 |
| BtsIMutI | CAGTG | 4 cut(s) | 1165, 1253, 1386, 1410 |
| BveI | ACCTGC | 1 cut(s) | 403 |
| Cac8I | GCNNGC | 6 cut(s) | 310, 368, 1110, 1212, 1694, 1764 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1255, 1385 |
| CciI | TCATGA | 2 cut(s) | 481, 1345 |
| CfoI | GCGC | 1 cut(s) | 1612 |
| Cfr13I | GGNCC | 6 cut(s) | 553, 707, 1376, 1490, 1715, 1793 |
| ClaI | ATCGAT | 1 cut(s) | 178 |
| Csp6I | GTAC | 3 cut(s) | 1047, 1143, 1676 |
| CviQI | GTAC | 3 cut(s) | 1047, 1143, 1676 |
| DdeI | CTNAG | 5 cut(s) | 1188, 1215, 1560, 1797, 1863 |
| DpnI | GATC | 7 cut(s) | 127, 177, 241, 570, 627, 681, 780 |
| DpnII | GATC | 7 cut(s) | 125, 175, 239, 568, 625, 679, 778 |
| EaeI | YGGCCR | 2 cut(s) | 49, 1822 |
| Eam1104I | CTCTTC | 2 cut(s) | 52, 1346 |
| EarI | CTCTTC | 2 cut(s) | 52, 1346 |
| Ecl136II | GAGCTC | 1 cut(s) | 1004 |
| Eco130I | CCWWGG | 1 cut(s) | 1829 |
| Eco147I | AGGCCT | 1 cut(s) | 1621 |
| Eco24I | GRGCYC | 1 cut(s) | 1006 |
| Eco47I | GGWCC | 4 cut(s) | 553, 707, 1376, 1715 |
| Eco53kI | GAGCTC | 1 cut(s) | 1004 |
| Eco57I | CTGAAG | 1 cut(s) | 1515 |
| Eco72I | CACGTG | 2 cut(s) | 173, 198 |
| EcoICRI | GAGCTC | 1 cut(s) | 1004 |
| EcoO109I | RGGNCCY | 2 cut(s) | 553, 1490 |
| EcoRI | GAATTC | 1 cut(s) | 1565 |
| EcoRII | CCWGG | 3 cut(s) | 225, 1432, 1492 |
| EcoT14I | CCWWGG | 1 cut(s) | 1829 |
| EcoT38I | GRGCYC | 1 cut(s) | 1006 |
| ErhI | CCWWGG | 1 cut(s) | 1829 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 721, 753 |
| FaqI | GGGAC | 1 cut(s) | 539 |
| FauI | CCCGC | 2 cut(s) | 524, 1678 |
| FauNDI | CATATG | 1 cut(s) | 1683 |
| Fnu4HI | GCNGC | 2 cut(s) | 1250, 1473 |
| FokI | GGATG | 8 cut(s) | 335, 440, 458, 908, 926, 1219, 1612, 1770 |
| FriOI | GRGCYC | 1 cut(s) | 1006 |
| Fsp4HI | GCNGC | 2 cut(s) | 1250, 1473 |
| FspBI | CTAG | 5 cut(s) | 81, 1101, 1211, 1359, 1830 |
| GlaI | GCGC | 1 cut(s) | 1611 |
| GluI | GCNGC | 2 cut(s) | 1250, 1473 |
| GsuI | CTGGAG | 2 cut(s) | 1305, 1506 |
| HaeII | RGCGCY | 1 cut(s) | 1613 |
| HaeIII | GGCC | 6 cut(s) | 51, 1432, 1491, 1621, 1795, 1824 |
| HapII | CCGG | 4 cut(s) | 862, 1328, 1631, 1688 |
| HhaI | GCGC | 1 cut(s) | 1612 |
| Hin6I | GCGC | 1 cut(s) | 1610 |
| HinP1I | GCGC | 1 cut(s) | 1610 |
| HincII | GTYRAC | 2 cut(s) | 1542, 1751 |
| HindII | GTYRAC | 2 cut(s) | 1542, 1751 |
| HpaII | CCGG | 4 cut(s) | 862, 1328, 1631, 1688 |
| HphI | GGTGA | 8 cut(s) | 74, 241, 536, 776, 800, 878, 1163, 1494 |
| Hpy166II | GTNNAC | 6 cut(s) | 338, 710, 859, 1163, 1542, 1751 |
| Hpy188I | TCNGA | 4 cut(s) | 1117, 1459, 1534, 1639 |
| Hpy188III | TCNNGA | 9 cut(s) | 105, 252, 298, 482, 581, 1083, 1226, 1346, 1485 |
| Hpy8I | GTNNAC | 6 cut(s) | 338, 710, 859, 1163, 1542, 1751 |
| Hpy99I | CGWCG | 1 cut(s) | 57 |
| HpyAV | CCTTC | 5 cut(s) | 65, 177, 511, 955, 1657 |
| HpyCH4III | ACNGT | 6 cut(s) | 19, 44, 102, 549, 1125, 1414 |
| HpyCH4IV | ACGT | 6 cut(s) | 172, 197, 334, 919, 1462, 1544 |
| HpyCH4V | TGCA | 8 cut(s) | 266, 412, 917, 1445, 1466, 1475, 1586, 1762 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 272, 1255, 1472, 1618, 1693, 1772, 1813 |
| HpyF3I | CTNAG | 5 cut(s) | 1188, 1215, 1560, 1797, 1863 |
| HpySE526I | ACGT | 6 cut(s) | 172, 197, 334, 919, 1462, 1544 |
| HspAI | GCGC | 1 cut(s) | 1610 |
| KflI | GGGWCCC | 1 cut(s) | 553 |
| Kzo9I | GATC | 7 cut(s) | 125, 175, 239, 568, 625, 679, 778 |
| LmnI | GCTCC | 5 cut(s) | 77, 1001, 1324, 1330, 1672 |
| Lsp1109I | GCAGC | 2 cut(s) | 1261, 1459 |
| LweI | GCATC | 8 cut(s) | 220, 904, 1121, 1197, 1264, 1454, 1803, 1857 |
| MaeI | CTAG | 5 cut(s) | 81, 1101, 1211, 1359, 1830 |
| MaeII | ACGT | 6 cut(s) | 172, 197, 334, 919, 1462, 1544 |
| MaeIII | GTNAC | 2 cut(s) | 1381, 1500 |
| MalI | GATC | 7 cut(s) | 127, 177, 241, 570, 627, 681, 780 |
| MboI | GATC | 7 cut(s) | 125, 175, 239, 568, 625, 679, 778 |
| MflI | RGATCY | 2 cut(s) | 239, 679 |
| MhlI | GDGCHC | 2 cut(s) | 668, 1006 |
| MlsI | TGGCCA | 1 cut(s) | 1824 |
| MluCI | AATT | 7 cut(s) | 486, 629, 756, 820, 1417, 1453, 1565 |
| MluNI | TGGCCA | 1 cut(s) | 1824 |
| MlyI | GAGTC | 5 cut(s) | 172, 365, 1061, 1199, 1238 |
| MmeI | TCCRAC | 4 cut(s) | 705, 891, 1687, 1693 |
| Mox20I | TGGCCA | 1 cut(s) | 1824 |
| MscI | TGGCCA | 1 cut(s) | 1824 |
| MseI | TTAA | 5 cut(s) | 21, 191, 455, 740, 1891 |
| MslI | CAYNNNNRTG | 2 cut(s) | 813, 1788 |
| Msp20I | TGGCCA | 1 cut(s) | 1824 |
| MspA1I | CMGCKG | 3 cut(s) | 1108, 1148, 1673 |
| MspI | CCGG | 4 cut(s) | 862, 1328, 1631, 1688 |
| MspR9I | CCNGG | 6 cut(s) | 227, 863, 1434, 1494, 1631, 1689 |
| Mva1269I | GAATGC | 1 cut(s) | 804 |
| MvaI | CCWGG | 3 cut(s) | 227, 1434, 1494 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 272, 1255, 1472, 1618, 1693, 1772, 1813 |
| NciI | CCSGG | 3 cut(s) | 863, 1631, 1689 |
| NdeI | CATATG | 1 cut(s) | 1683 |
| NdeII | GATC | 7 cut(s) | 125, 175, 239, 568, 625, 679, 778 |
| NheI | GCTAGC | 1 cut(s) | 1210 |
| NmuCI | GTSAC | 2 cut(s) | 1381, 1500 |
| NspI | RCATGY | 3 cut(s) | 1400, 1696, 1849 |
| PaeI | GCATGC | 1 cut(s) | 1696 |
| PagI | TCATGA | 2 cut(s) | 481, 1345 |
| PceI | AGGCCT | 1 cut(s) | 1621 |
| PciI | ACATGT | 1 cut(s) | 1396 |
| PctI | GAATGC | 1 cut(s) | 804 |
| PfeI | GAWTC | 7 cut(s) | 255, 291, 497, 846, 941, 1244, 1549 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1385 |
| PkrI | GCNGC | 2 cut(s) | 1251, 1474 |
| PleI | GAGTC | 5 cut(s) | 171, 364, 1060, 1198, 1237 |
| PmaCI | CACGTG | 2 cut(s) | 173, 198 |
| PmlI | CACGTG | 2 cut(s) | 173, 198 |
| PpsI | GAGTC | 5 cut(s) | 171, 364, 1060, 1198, 1237 |
| Ppu21I | YACGTR | 4 cut(s) | 173, 198, 335, 920 |
| PpuMI | RGGWCCY | 1 cut(s) | 553 |
| PscI | ACATGT | 1 cut(s) | 1396 |
| PshAI | GACNNNNGTC | 1 cut(s) | 343 |
| PsiI | TTATAA | 1 cut(s) | 389 |
| Psp124BI | GAGCTC | 1 cut(s) | 1006 |
| Psp1406I | AACGTT | 1 cut(s) | 1544 |
| Psp5II | RGGWCCY | 1 cut(s) | 553 |
| Psp6I | CCWGG | 3 cut(s) | 225, 1432, 1492 |
| PspCI | CACGTG | 2 cut(s) | 173, 198 |
| PspGI | CCWGG | 3 cut(s) | 225, 1432, 1492 |
| PspPI | GGNCC | 6 cut(s) | 553, 707, 1376, 1490, 1715, 1793 |
| PspPPI | RGGWCCY | 1 cut(s) | 553 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1255, 1385 |
| PsuI | RGATCY | 2 cut(s) | 239, 679 |
| PvuII | CAGCTG | 2 cut(s) | 1108, 1148 |
| RsaI | GTAC | 3 cut(s) | 1048, 1144, 1677 |
| RsaNI | GTAC | 3 cut(s) | 1047, 1143, 1676 |
| RseI | CAYNNNNRTG | 2 cut(s) | 813, 1788 |
| SacI | GAGCTC | 1 cut(s) | 1006 |
| SaqAI | TTAA | 5 cut(s) | 21, 191, 455, 740, 1891 |
| SatI | GCNGC | 2 cut(s) | 1250, 1473 |
| Sau3AI | GATC | 7 cut(s) | 125, 175, 239, 568, 625, 679, 778 |
| Sau96I | GGNCC | 6 cut(s) | 553, 707, 1376, 1490, 1715, 1793 |
| SchI | GAGTC | 5 cut(s) | 172, 365, 1061, 1199, 1238 |
| ScrFI | CCNGG | 6 cut(s) | 227, 863, 1434, 1494, 1631, 1689 |
| SduI | GDGCHC | 2 cut(s) | 668, 1006 |
| SfaNI | GCATC | 8 cut(s) | 220, 904, 1121, 1197, 1264, 1454, 1803, 1857 |
| SfcI | CTRYAG | 1 cut(s) | 1194 |
| SinI | GGWCC | 4 cut(s) | 553, 707, 1376, 1715 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 813, 1788 |
| SmlI | CTYRAG | 3 cut(s) | 698, 1005, 1605 |
| SmoI | CTYRAG | 3 cut(s) | 698, 1005, 1605 |
| SphI | GCATGC | 1 cut(s) | 1696 |
| Sse9I | AATT | 7 cut(s) | 486, 629, 756, 820, 1417, 1453, 1565 |
| SseBI | AGGCCT | 1 cut(s) | 1621 |
| SsiI | CCGC | 4 cut(s) | 517, 882, 1204, 1671 |
| SspMI | CTAG | 5 cut(s) | 81, 1101, 1211, 1359, 1830 |
| SstI | GAGCTC | 1 cut(s) | 1006 |
| StuI | AGGCCT | 1 cut(s) | 1621 |
| StyD4I | CCNGG | 6 cut(s) | 225, 861, 1432, 1492, 1629, 1687 |
| StyI | CCWWGG | 1 cut(s) | 1829 |
| TaaI | ACNGT | 6 cut(s) | 19, 44, 102, 549, 1125, 1414 |
| TaiI | ACGT | 6 cut(s) | 175, 200, 337, 922, 1465, 1547 |
| TaqI | TCGA | 3 cut(s) | 55, 178, 1055 |
| TasI | AATT | 7 cut(s) | 486, 629, 756, 820, 1417, 1453, 1565 |
| TatI | WGTACW | 1 cut(s) | 1142 |
| TfiI | GAWTC | 7 cut(s) | 255, 291, 497, 846, 941, 1244, 1549 |
| Tru1I | TTAA | 5 cut(s) | 21, 191, 455, 740, 1891 |
| Tru9I | TTAA | 5 cut(s) | 21, 191, 455, 740, 1891 |
| TscAI | CASTG | 4 cut(s) | 1165, 1260, 1386, 1417 |
| TseFI | GTSAC | 2 cut(s) | 1381, 1500 |
| TseI | GCWGC | 2 cut(s) | 1249, 1472 |
| Tsp45I | GTSAC | 2 cut(s) | 1381, 1500 |
| TspGWI | ACGGA | 1 cut(s) | 1647 |
| TspRI | CASTG | 4 cut(s) | 1165, 1260, 1386, 1417 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1385 |
| VpaK11BI | GGWCC | 4 cut(s) | 553, 707, 1376, 1715 |
| XapI | RAATTY | 3 cut(s) | 820, 1417, 1565 |
| XceI | RCATGY | 3 cut(s) | 1400, 1696, 1849 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 233 |
| XmaJI | CCTAGG | 1 cut(s) | 1829 |
| XspI | CTAG | 5 cut(s) | 81, 1101, 1211, 1359, 1830 |