Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0002232

Physical Location & Seq

Genomic Coordinates Forward (+)

8470862 .. 8476782

Gene Structure 5921 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g10330.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGAATGCACAACAAGCTCCCCATCATAAATCTTCTGCTAATGGTTTTGGCCGTCGAAGAGGTGAGAGAGAAGGGGGGCCTAGGGTCGAGAATAGGTCAAAGTCTGGAGCAGAAAACCACAGCAGATTAACAAGCAGCAAATCTGGGAACTCTGAGAGTCCTTCACGCGATCGATTAGTATATATGACTACATGTCTTATTGGGCATAATGTGGAAGTCCAGGTGAAAAATGGATCTGTATATTATGGAATATTTCATGCAACAAACGCTGAAAAAGACTTTGGAATCATCTTGAAAATGGCACGAATGATAAAGGATGGTTTAGTATGCGGACAAAAGTCTACGACAGAGTCACTTAGCAAGGCTCCGTCAAAGACTTTAATTATACCTGCCAAAGAACTTGTACAAGTTATCGCAAAGGATGTCTCAATAACAAGGGATGGATTGTTAAATGAGGTTCAGCATGAAAAACATCAGGAACTTATGATAGATTCCTTTATATCACAATCCCGCCGCGGTGAGTTGGAGAGAGAGCTGGAACCGTGGGTGCCTGATGAAGATGATCCACAACGTCCTGAATTGGAAAATATATTTGATGGACAATGGAATAGGAAATGGGATCAATTTGAAACAAATGAAACATTATTTGGGGTAAAAAGCACATTTGATGCGGACCTTTACACAACTAAACTTGCGAAAGGCCCTCAAACAAAAGAGTTGGAAAGGGAAGCTTTAAGAATAGCAAGAGAAATTGAGGGTGAGGATACACCTGATCTGCATATGGCAGAGGAAAGAGGCATTCACCTCCATGTGGATATTGACGAGGAGACAAGATTCTCCTCTGTTTATCGGGGGGAAGTAGTTGATGATAGTGGATATGATGAAGATGAGGACATTTTGTTGGATACACGTAATACCGAAACCTTTGGAGATTCTACTGGTTCTTTAAGGAAGAGTTCAATGGACTGGACCACTGGAAAAAGCAACAATAGGGCGCCATCAAGCTCTTCATTTGTGGATTACTCACAATCTTCTGAGTCAAATGTTGCCCCAGATTTATGTCGCTCTGGATCCTATGACCATGCTAGACATCTGGCGTCAGAAACACTTTTCAAGAGCTTCCCCAGTACAGATGGTGAAAGCAGTGAACATGGCGAGGTGGATAGTGCTGCTGGGTCTGTTGTAAAGGTGAAGCTAGCTGAAGACAATCAAACATCAAAACCAGACGATTCACAGCCATTATTGAATGGGAAGGAAGATGCATTTGAGAAAGGTGGTTTATCCTCCAGTGCCACCTCTTATGCTCCTGGTCAGGCTTCATCAAAAGGTCATGAGAAGACGGGTTATAGTGACCCAGTGACTGGCAAATCACATGTTCAAACACAGACAGTAAATTCTCATGGACGACCTGGTAGTTCTGCATCTTCCAATTCAGAATTCCCAGCTGCTGCCTCAGTTTCTGGTGGACCTGGTTTATCACCAAGCTCATCTCTGGGTTCGTTGTCCTCTGAAAAGTCAACATTGAATCCCCATGCAAAGGAATTCAAACTCAATCCGCATGCAAAGAGTTTTGTTCCATCTCAAGCGCCTGTTAGGCCTCCATCCCCAGTGTCTGATGGCTCCTTCTATTATCCAACTAATGCACCTGCTGTACCACATATGCCAGGCATGCCTGTTGGCATTGGAGTTGGGCCCTCTTTCGGACACCAACCCGTTATGTTTAATCCACAGCAAGGACCCCAACCCTATTTTCATCCAAATGGGCCCCAGTATGGGCAACAGATGCTTCTTGGCCATCCTAGGCTAGTATACATGCCAAACTACCAACCTGAAATGCCGTACAAAGGACGAGATTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009987 GO:0010494 GO:0010603 GO:0016043 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0033043 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0065003 GO:0065007 GO:0070925 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1902115 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LsmAD PAM2 SM-ATX

Protein Analysis

620

Amino Acids

67.73

Weight (kDa)

5.58

Isoelectric Point (pI)

48.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54170 AT3G14010 AT3G14010 AT3G14010 AT3G14010 AT3G14010
fragaria_vesca	FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380
malus_domestica	MD09G1186100.v1.1 MD17G1171000.v1.1
prunus_persica	Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1
pyrus_communis	pycom09g10330 pycom12419g00200 pycom12419g00210
rosa_chinensis	RchiOBHm_Chr2g0110201 RchiOBHm_Chr2g0144721
rosa_laevigata	RLG00000020103
rosa_multiflora	Rmu_co8157946.1_g000001 Rmu_sc0013504.1_g000008 Rmu_sc0020351.1_g000001
rosa_roxburghii	Rroxscaffold_2G00101040 Rroxscaffold_3G00222660 Rroxscaffold_7G00205460
rosa_rugosa	Rorug02G0389100 Rorug02G0389100 Rorug02G0389200 Rorug02G0389300
rosa_samantha	Rh2AG440900 Rh2BG451300 Rh2CG220200 Rh2CG428200 Rh2DG461300 Rh3DG266300
rosa_wichuraiana	Rw2G021150 Rw2G036070 Rw7G020140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1654
Acc36I	ACCTGC	2 cut(s)	397, 1654
AccB1I	GGYRCC	2 cut(s)	547, 994
AccB7I	CCANNNNNTGG	1 cut(s)	1361
AccI	GTMKAC	2 cut(s)	341, 1809
AccII	CGCG	2 cut(s)	168, 516
AciI	CCGC	6 cut(s)	330, 511, 514, 516, 671, 1556
AclWI	GGATC	5 cut(s)	241, 557, 627, 1065, 1078
AcoI	YGGCCR	2 cut(s)	49, 1792
AcsI	RAATTY	3 cut(s)	1393, 1436, 1541
AcuI	CTGAAG	1 cut(s)	1221
AcyI	GRCGYC	2 cut(s)	995, 1097
AfaI	GTAC	4 cut(s)	405, 1129, 1653, 1841
AfiI	CCNNNNNNNGG	8 cut(s)	811, 1361, 1537, 1700, 1733, 1772, 1773, 1844
AflIII	ACRYGT	3 cut(s)	191, 908, 1372
AgsI	TTSAA	8 cut(s)	295, 629, 960, 1114, 1246, 1379, 1525, 1546
AhdI	GACNNNNNGTC	1 cut(s)	192
AjnI	CCWGG	5 cut(s)	219, 1306, 1408, 1468, 1663
AjuI	GAANNNNNNNTTGG	8 cut(s)	264, 296, 630, 662, 1421, 1453, 1734, 1766
AluBI	AGCT	9 cut(s)	17, 535, 731, 1005, 1119, 1195, 1199, 1445, 1485
AluI	AGCT	9 cut(s)	17, 535, 731, 1005, 1119, 1195, 1199, 1445, 1485
Alw26I	GTCTC	2 cut(s)	430, 821
AlwI	GGATC	5 cut(s)	241, 557, 627, 1065, 1078
AlwNI	CAGNNNCTG	4 cut(s)	1361, 1448, 1460, 1613
AoxI	GGCC	7 cut(s)	49, 77, 700, 1595, 1691, 1763, 1792
ApaI	GGGCCC	2 cut(s)	1695, 1767
ApeKI	GCWGC	4 cut(s)	135, 1169, 1445, 1448
ApoI	RAATTY	3 cut(s)	1393, 1436, 1541
AspA2I	CCTAGG	2 cut(s)	80, 1799
AspLEI	GCGC	2 cut(s)	997, 1588
AsuHPI	GGTGA	8 cut(s)	74, 235, 530, 770, 794, 1148, 1201, 1470
AsuNHI	GCTAGC	1 cut(s)	1195
AvaII	GGWCC	4 cut(s)	673, 969, 1466, 1736
AvrII	CCTAGG	2 cut(s)	80, 1799
BaeGI	GKGCMC	2 cut(s)	1695, 1767
BalI	TGGCCA	1 cut(s)	1794
BamHI	GGATCC	1 cut(s)	1070
BanI	GGYRCC	2 cut(s)	547, 994
BanII	GRGCYC	2 cut(s)	1695, 1767
BbsI	GAAGAC	2 cut(s)	1209, 1343
BbvI	GCAGC	4 cut(s)	147, 1156, 1432, 1435
BceAI	ACGGC	2 cut(s)	36, 1822
BciT130I	CCWGG	5 cut(s)	221, 1308, 1410, 1470, 1665
BciVI	GTATCC	2 cut(s)	757, 898
BcoDI	GTCTC	2 cut(s)	430, 821
BfaI	CTAG	5 cut(s)	81, 1086, 1196, 1800, 1805
BfoI	RGCGCY	2 cut(s)	998, 1589
BfuAI	ACCTGC	2 cut(s)	397, 1654
BfuI	GTATCC	2 cut(s)	757, 898
BglI	GCCNNNNNGGC	1 cut(s)	1594
BisI	GCNGC	5 cut(s)	136, 514, 1170, 1446, 1449
BlnI	CCTAGG	2 cut(s)	80, 1799
BlsI	GCNGC	5 cut(s)	137, 515, 1171, 1447, 1450
Bme1390I	CCNGG	5 cut(s)	221, 1308, 1410, 1470, 1665
Bme18I	GGWCC	4 cut(s)	673, 969, 1466, 1736
BmeRI	GACNNNNNGTC	1 cut(s)	192
BmrFI	CCNGG	5 cut(s)	221, 1308, 1410, 1470, 1665
BmrI	ACTGGG	4 cut(s)	1119, 1349, 1601, 1762
BmsI	GCATC	4 cut(s)	658, 1249, 1430, 1773
BmtI	GCTAGC	1 cut(s)	1199
BmuI	ACTGGG	4 cut(s)	1119, 1349, 1601, 1762
BoxI	GACNNNNGTC	1 cut(s)	337
BpiI	GAAGAC	2 cut(s)	1209, 1343
BpmI	CTGGAG	2 cut(s)	126, 1270
BpuEI	CTTGAG	1 cut(s)	1566
Bsa29I	ATCGAT	1 cut(s)	172
BsaAI	YACGTR	1 cut(s)	911
BsaHI	GRCGYC	2 cut(s)	995, 1097
BsaJI	CCNNGG	4 cut(s)	80, 514, 542, 1799
Bsc4I	CCNNNNNNNGG	8 cut(s)	811, 1361, 1537, 1700, 1733, 1772, 1773, 1844
Bse1I	ACTGG	9 cut(s)	943, 971, 979, 1125, 1287, 1355, 1366, 1607, 1768
BseBI	CCWGG	5 cut(s)	221, 1308, 1410, 1470, 1665
BseCI	ATCGAT	1 cut(s)	172
BseDI	CCNNGG	4 cut(s)	80, 514, 542, 1799
BseGI	GGATG	6 cut(s)	322, 427, 445, 1601, 1753, 1795
BseLI	CCNNNNNNNGG	8 cut(s)	811, 1361, 1537, 1700, 1733, 1772, 1773, 1844
BseMII	CTCAG	3 cut(s)	144, 1026, 1467
BseNI	ACTGG	9 cut(s)	943, 971, 979, 1125, 1287, 1355, 1366, 1607, 1768
BseRI	GAGGAG	2 cut(s)	829, 839
BseSI	GKGCMC	2 cut(s)	1695, 1767
BseXI	GCAGC	4 cut(s)	147, 1156, 1432, 1435
BseYI	CCCAGC	2 cut(s)	1172, 1441
Bsh1236I	CGCG	2 cut(s)	168, 516
Bsh1285I	CGRYCG	1 cut(s)	172
BshFI	GGCC	7 cut(s)	51, 79, 702, 1597, 1693, 1765, 1794
BshNI	GGYRCC	2 cut(s)	547, 994
BshVI	ATCGAT	1 cut(s)	172
BsiEI	CGRYCG	1 cut(s)	172
BslI	CCNNNNNNNGG	8 cut(s)	811, 1361, 1537, 1700, 1733, 1772, 1773, 1844
BsmAI	GTCTC	2 cut(s)	430, 821
BsmI	GAATGC	2 cut(s)	10, 798
BsnI	GGCC	7 cut(s)	51, 79, 702, 1597, 1693, 1765, 1794
Bsp120I	GGGCCC	2 cut(s)	1691, 1763
Bsp1286I	GDGCHC	2 cut(s)	1695, 1767
Bsp1407I	TGTACA	1 cut(s)	403
Bsp143I	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
BspACI	CCGC	6 cut(s)	330, 511, 514, 516, 671, 1556
BspANI	GGCC	7 cut(s)	51, 79, 702, 1597, 1693, 1765, 1794
BspCNI	CTCAG	3 cut(s)	145, 1027, 1466
BspDI	ATCGAT	1 cut(s)	172
BspFNI	CGCG	2 cut(s)	168, 516
BspHI	TCATGA	1 cut(s)	1330
BspMI	ACCTGC	2 cut(s)	397, 1654
BspOI	GCTAGC	1 cut(s)	1199
BspPI	GGATC	5 cut(s)	241, 557, 627, 1065, 1078
BspQI	GCTCTTC	1 cut(s)	1012
BspT107I	GGYRCC	2 cut(s)	547, 994
BsrGI	TGTACA	1 cut(s)	403
BsrI	ACTGG	9 cut(s)	943, 971, 979, 1125, 1287, 1355, 1366, 1607, 1768
BssECI	CCNNGG	4 cut(s)	80, 514, 542, 1799
BssMI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
BssNAI	GTATAC	1 cut(s)	1810
BssNI	GRCGYC	2 cut(s)	995, 1097
BssT1I	CCWWGG	2 cut(s)	80, 1799
Bst1107I	GTATAC	1 cut(s)	1810
Bst2UI	CCWGG	5 cut(s)	221, 1308, 1410, 1470, 1665
Bst4CI	ACNGT	2 cut(s)	543, 1390
Bst6I	CTCTTC	3 cut(s)	52, 947, 1012
BstACI	GRCGYC	2 cut(s)	995, 1097
BstAPI	GCANNNNNTGC	1 cut(s)	1783
BstAUI	TGTACA	1 cut(s)	403
BstBAI	YACGTR	1 cut(s)	911
BstC8I	GCNNGC	3 cut(s)	1197, 1560, 1670
BstDEI	CTNAG	4 cut(s)	153, 356, 1035, 1453
BstDSI	CCRYGG	2 cut(s)	514, 542
BstF5I	GGATG	6 cut(s)	322, 427, 445, 1601, 1753, 1795
BstFNI	CGCG	2 cut(s)	168, 516
BstH2I	RGCGCY	2 cut(s)	998, 1589
BstHHI	GCGC	2 cut(s)	997, 1588
BstKTI	GATC	6 cut(s)	172, 236, 565, 622, 775, 1073
BstMAI	GTCTC	2 cut(s)	430, 821
BstMBI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
BstMCI	CGRYCG	1 cut(s)	172
BstMWI	GCNNNNNNNGC	5 cut(s)	14, 266, 1594, 1669, 1783
BstNI	CCWGG	5 cut(s)	221, 1308, 1410, 1470, 1665
BstNSI	RCATGY	5 cut(s)	195, 1376, 1562, 1672, 1816
BstPAI	GACNNNNGTC	1 cut(s)	337
BstSCI	CCNGG	5 cut(s)	219, 1306, 1408, 1468, 1663
BstSLI	GKGCMC	2 cut(s)	1695, 1767
BstUI	CGCG	2 cut(s)	168, 516
BstV1I	GCAGC	4 cut(s)	147, 1156, 1432, 1435
BstV2I	GAAGAC	2 cut(s)	1209, 1343
BstX2I	RGATCY	2 cut(s)	233, 1070
BstYI	RGATCY	2 cut(s)	233, 1070
BstZ17I	GTATAC	1 cut(s)	1810
Bsu15I	ATCGAT	1 cut(s)	172
BsuI	GTATCC	2 cut(s)	757, 898
BsuRI	GGCC	7 cut(s)	51, 79, 702, 1597, 1693, 1765, 1794
BsuTUI	ATCGAT	1 cut(s)	172
BtgI	CCRYGG	2 cut(s)	514, 542
BtsCI	GGATG	6 cut(s)	322, 427, 445, 1601, 1753, 1795
BtsI	GCAGTG	1 cut(s)	1150
BtsIMutI	CAGTG	5 cut(s)	972, 1150, 1294, 1362, 1614
BveI	ACCTGC	2 cut(s)	397, 1654
Cac8I	GCNNGC	3 cut(s)	1197, 1560, 1670
CaiI	CAGNNNCTG	4 cut(s)	1361, 1448, 1460, 1613
CciI	TCATGA	1 cut(s)	1330
CfoI	GCGC	2 cut(s)	997, 1588
Cfr42I	CCGCGG	1 cut(s)	517
ClaI	ATCGAT	1 cut(s)	172
CseI	GACGC	1 cut(s)	1086
CsiI	ACCWGGT	2 cut(s)	1408, 1468
Csp6I	GTAC	4 cut(s)	404, 1128, 1652, 1840
CviQI	GTAC	4 cut(s)	404, 1128, 1652, 1840
DdeI	CTNAG	4 cut(s)	153, 356, 1035, 1453
DinI	GGCGCC	1 cut(s)	996
DpnI	GATC	6 cut(s)	171, 235, 564, 621, 774, 1072
DpnII	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
DriI	GACNNNNNGTC	1 cut(s)	192
EaeI	YGGCCR	2 cut(s)	49, 1792
Eam1104I	CTCTTC	3 cut(s)	52, 947, 1012
Eam1105I	GACNNNNNGTC	1 cut(s)	192
EarI	CTCTTC	3 cut(s)	52, 947, 1012
Eco130I	CCWWGG	2 cut(s)	80, 1799
Eco147I	AGGCCT	1 cut(s)	1597
Eco24I	GRGCYC	2 cut(s)	1695, 1767
Eco47I	GGWCC	4 cut(s)	673, 969, 1466, 1736
Eco57I	CTGAAG	1 cut(s)	1221
EcoO109I	RGGNCCY	5 cut(s)	77, 701, 1692, 1736, 1764
EcoRI	GAATTC	2 cut(s)	1436, 1541
EcoRII	CCWGG	5 cut(s)	219, 1306, 1408, 1468, 1663
EcoT14I	CCWWGG	2 cut(s)	80, 1799
EcoT22I	ATGCAT	1 cut(s)	1264
EcoT38I	GRGCYC	2 cut(s)	1695, 1767
EgeI	GGCGCC	1 cut(s)	996
EheI	GGCGCC	1 cut(s)	996
ErhI	CCWWGG	2 cut(s)	80, 1799
FalI	AAGNNNNNCTT	2 cut(s)	715, 747
FauI	CCCGC	1 cut(s)	518
FauNDI	CATATG	2 cut(s)	780, 1659
FblI	GTMKAC	2 cut(s)	341, 1809
Fnu4HI	GCNGC	5 cut(s)	136, 514, 1170, 1446, 1449
FokI	GGATG	6 cut(s)	329, 434, 452, 1588, 1740, 1782
FriOI	GRGCYC	2 cut(s)	1695, 1767
Fsp4HI	GCNGC	5 cut(s)	136, 514, 1170, 1446, 1449
FspBI	CTAG	5 cut(s)	81, 1086, 1196, 1800, 1805
GlaI	GCGC	2 cut(s)	996, 1587
GluI	GCNGC	5 cut(s)	136, 514, 1170, 1446, 1449
GsaI	CCCAGC	2 cut(s)	1176, 1445
GsuI	CTGGAG	2 cut(s)	126, 1270
HaeII	RGCGCY	2 cut(s)	998, 1589
HaeIII	GGCC	7 cut(s)	51, 79, 702, 1597, 1693, 1765, 1794
HgaI	GACGC	1 cut(s)	1086
HhaI	GCGC	2 cut(s)	997, 1588
Hin1I	GRCGYC	2 cut(s)	995, 1097
Hin6I	GCGC	2 cut(s)	995, 1586
HinP1I	GCGC	2 cut(s)	995, 1586
HincII	GTYRAC	1 cut(s)	1518
HindII	GTYRAC	1 cut(s)	1518
HindIII	AAGCTT	1 cut(s)	729
HinfI	GANTC	9 cut(s)	157, 285, 350, 491, 834, 932, 1037, 1229, 1525
HphI	GGTGA	8 cut(s)	74, 235, 530, 770, 794, 1148, 1201, 1470
Hpy166II	GTNNAC	5 cut(s)	342, 1148, 1466, 1518, 1810
Hpy188I	TCNGA	7 cut(s)	154, 1036, 1102, 1435, 1510, 1615, 1703
Hpy188III	TCNNGA	8 cut(s)	88, 105, 292, 476, 575, 1068, 1114, 1331
Hpy8I	GTNNAC	5 cut(s)	342, 1148, 1466, 1518, 1810
Hpy99I	CGWCG	1 cut(s)	57
HpyAV	CCTTC	4 cut(s)	65, 171, 1246, 1633
HpyCH4III	ACNGT	2 cut(s)	543, 1390
HpyCH4IV	ACGT	2 cut(s)	571, 910
HpyCH4V	TGCA	8 cut(s)	8, 260, 778, 1262, 1421, 1535, 1562, 1643
HpyF10VI	GCNNNNNNNGC	5 cut(s)	14, 266, 1594, 1669, 1783
HpyF3I	CTNAG	4 cut(s)	153, 356, 1035, 1453
HpySE526I	ACGT	2 cut(s)	571, 910
Hsp92I	GRCGYC	2 cut(s)	995, 1097
HspAI	GCGC	2 cut(s)	995, 1586
KasI	GGCGCC	1 cut(s)	994
KspI	CCGCGG	1 cut(s)	517
Kzo9I	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
LguI	GCTCTTC	1 cut(s)	1012
LmnI	GCTCC	5 cut(s)	22, 107, 370, 1309, 1625
Lsp1109I	GCAGC	4 cut(s)	147, 1156, 1432, 1435
LweI	GCATC	4 cut(s)	658, 1249, 1430, 1773
MabI	ACCWGGT	2 cut(s)	1408, 1468
MaeI	CTAG	5 cut(s)	81, 1086, 1196, 1800, 1805
MaeII	ACGT	2 cut(s)	571, 910
MaeIII	GTNAC	3 cut(s)	351, 1349, 1357
MalI	GATC	6 cut(s)	171, 235, 564, 621, 774, 1072
MboI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
MflI	RGATCY	2 cut(s)	233, 1070
MhlI	GDGCHC	2 cut(s)	1695, 1767
MlsI	TGGCCA	1 cut(s)	1794
MluCI	AATT	8 cut(s)	381, 578, 623, 750, 1393, 1429, 1436, 1541
MluNI	TGGCCA	1 cut(s)	1794
Mly113I	GGCGCC	1 cut(s)	995
MlyI	GAGTC	3 cut(s)	166, 359, 1046
MmeI	TCCRAC	4 cut(s)	504, 699, 882, 1658
Mox20I	TGGCCA	1 cut(s)	1794
Mph1103I	ATGCAT	1 cut(s)	1264
MscI	TGGCCA	1 cut(s)	1794
MseI	TTAA	6 cut(s)	128, 380, 449, 734, 947, 1722
MslI	CAYNNNNRTG	2 cut(s)	807, 1758
Msp20I	TGGCCA	1 cut(s)	1794
MspA1I	CMGCKG	2 cut(s)	516, 1445
MspR9I	CCNGG	5 cut(s)	221, 1308, 1410, 1470, 1665
Mva1269I	GAATGC	2 cut(s)	10, 798
MvaI	CCWGG	5 cut(s)	221, 1308, 1410, 1470, 1665
MvnI	CGCG	2 cut(s)	168, 516
MwoI	GCNNNNNNNGC	5 cut(s)	14, 266, 1594, 1669, 1783
NarI	GGCGCC	1 cut(s)	995
NdeI	CATATG	2 cut(s)	780, 1659
NdeII	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
NheI	GCTAGC	1 cut(s)	1195
NmuCI	GTSAC	3 cut(s)	351, 1349, 1357
NsiI	ATGCAT	1 cut(s)	1264
NspI	RCATGY	5 cut(s)	195, 1376, 1562, 1672, 1816
PaeI	GCATGC	2 cut(s)	1562, 1672
PagI	TCATGA	1 cut(s)	1330
PaqCI	CACCTGC	1 cut(s)	1654
PceI	AGGCCT	1 cut(s)	1597
PciI	ACATGT	2 cut(s)	191, 1372
PciSI	GCTCTTC	1 cut(s)	1012
PctI	GAATGC	2 cut(s)	10, 798
PfeI	GAWTC	6 cut(s)	285, 491, 834, 932, 1229, 1525
PflFI	GACNNNGTC	1 cut(s)	349
PflMI	CCANNNNNTGG	1 cut(s)	1361
PkrI	GCNGC	5 cut(s)	137, 515, 1171, 1447, 1450
Ple19I	CGATCG	1 cut(s)	172
PleI	GAGTC	3 cut(s)	165, 358, 1045
PluTI	GGCGCC	1 cut(s)	998
PpsI	GAGTC	3 cut(s)	165, 358, 1045
Ppu21I	YACGTR	1 cut(s)	911
PpuMI	RGGWCCY	1 cut(s)	1736
PscI	ACATGT	2 cut(s)	191, 1372
PshAI	GACNNNNGTC	1 cut(s)	337
Psp5II	RGGWCCY	1 cut(s)	1736
Psp6I	CCWGG	5 cut(s)	219, 1306, 1408, 1468, 1663
PspFI	CCCAGC	2 cut(s)	1172, 1441
PspGI	CCWGG	5 cut(s)	219, 1306, 1408, 1468, 1663
PspOMI	GGGCCC	2 cut(s)	1691, 1763
PspPPI	RGGWCCY	1 cut(s)	1736
PstNI	CAGNNNCTG	4 cut(s)	1361, 1448, 1460, 1613
PsuI	RGATCY	2 cut(s)	233, 1070
PsyI	GACNNNGTC	1 cut(s)	349
PvuI	CGATCG	1 cut(s)	172
PvuII	CAGCTG	1 cut(s)	1445
RsaI	GTAC	4 cut(s)	405, 1129, 1653, 1841
RsaNI	GTAC	4 cut(s)	404, 1128, 1652, 1840
RseI	CAYNNNNRTG	2 cut(s)	807, 1758
SacII	CCGCGG	1 cut(s)	517
SapI	GCTCTTC	1 cut(s)	1012
SaqAI	TTAA	6 cut(s)	128, 380, 449, 734, 947, 1722
SatI	GCNGC	5 cut(s)	136, 514, 1170, 1446, 1449
Sau3AI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
SchI	GAGTC	3 cut(s)	166, 359, 1046
ScrFI	CCNGG	5 cut(s)	221, 1308, 1410, 1470, 1665
SduI	GDGCHC	2 cut(s)	1695, 1767
SexAI	ACCWGGT	2 cut(s)	1408, 1468
SfaNI	GCATC	4 cut(s)	658, 1249, 1430, 1773
SfoI	GGCGCC	1 cut(s)	996
Sfr303I	CCGCGG	1 cut(s)	517
SgrBI	CCGCGG	1 cut(s)	517
SinI	GGWCC	4 cut(s)	673, 969, 1466, 1736
SmiMI	CAYNNNNRTG	2 cut(s)	807, 1758
SmlI	CTYRAG	1 cut(s)	1581
SmoI	CTYRAG	1 cut(s)	1581
SphI	GCATGC	2 cut(s)	1562, 1672
Sse9I	AATT	8 cut(s)	381, 578, 623, 750, 1393, 1429, 1436, 1541
SseBI	AGGCCT	1 cut(s)	1597
SsiI	CCGC	6 cut(s)	330, 511, 514, 516, 671, 1556
SspDI	GGCGCC	1 cut(s)	994
SspI	AATATT	1 cut(s)	252
SspMI	CTAG	5 cut(s)	81, 1086, 1196, 1800, 1805
StuI	AGGCCT	1 cut(s)	1597
StyD4I	CCNGG	5 cut(s)	219, 1306, 1408, 1468, 1663
StyI	CCWWGG	2 cut(s)	80, 1799
TaaI	ACNGT	2 cut(s)	543, 1390
TaiI	ACGT	2 cut(s)	574, 913
TaqI	TCGA	3 cut(s)	55, 87, 172
TasI	AATT	8 cut(s)	381, 578, 623, 750, 1393, 1429, 1436, 1541
TatI	WGTACW	2 cut(s)	403, 1127
TauI	GCSGC	1 cut(s)	516
TfiI	GAWTC	6 cut(s)	285, 491, 834, 932, 1229, 1525
Tru1I	TTAA	6 cut(s)	128, 380, 449, 734, 947, 1722
Tru9I	TTAA	6 cut(s)	128, 380, 449, 734, 947, 1722
TscAI	CASTG	5 cut(s)	979, 1150, 1294, 1362, 1614
TseFI	GTSAC	3 cut(s)	351, 1349, 1357
TseI	GCWGC	4 cut(s)	135, 1169, 1445, 1448
Tsp45I	GTSAC	3 cut(s)	351, 1349, 1357
TspDTI	ATGAA	9 cut(s)	17, 245, 480, 570, 651, 897, 999, 1308, 1742
TspGWI	ACGGA	1 cut(s)	357
TspRI	CASTG	5 cut(s)	979, 1150, 1294, 1362, 1614
Tth111I	GACNNNGTC	1 cut(s)	349
Van91I	CCANNNNNTGG	1 cut(s)	1361
VpaK11BI	GGWCC	4 cut(s)	673, 969, 1466, 1736
XapI	RAATTY	3 cut(s)	1393, 1436, 1541
XceI	RCATGY	5 cut(s)	195, 1376, 1562, 1672, 1816
XcmI	CCANNNNNNNNNTGG	1 cut(s)	227
XmaJI	CCTAGG	2 cut(s)	80, 1799
XmiI	GTMKAC	2 cut(s)	341, 1809
XspI	CTAG	5 cut(s)	81, 1086, 1196, 1800, 1805
Zsp2I	ATGCAT	1 cut(s)	1264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.