Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0002232

Physical Location & Seq

Genomic Coordinates Reverse (-)

66588078 .. 66597889

Gene Structure 9812 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG461300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGCTCAGTATTGGAAACGACATGTGCGATGTGGCCATGGAAACAAGGGACAAGAAGCCCATTGACCTCGTGTCTTACTGCTTCTCCCACCAACTCGGAAGCGGCCTCGGAGTTATTATAGGCTTCATTAAGCTTATTAAGGTTAGAGGGGGTGCTAGGGTCGAGAATAAGTCGCAGTCGGGGAAGGCAAACCATAGCAAATCAAGCAGCAAAGCTGGTAACTATGAGAGTCCTTCGCGTGATCGCGTAGTATTTTTAACTACATGTCTTATTGGACATCATGTGGAGGTTCAGGTGAAAAATGGATCCATATACACCGGAATATTTCATGCAACGAATGCTGATAAAGATTTTGGAATCATATTGAAAATGGCTCGCATGATAAAGGATGGTTCCTTACGAGGGCAGAAGTCTATGTCAGATTCAGTTAGCAAGGCTCCTTTAAAGACATTAATTATACCTTCCAAAGAACTTGTGCAAGTGATAGCAAAGGATGTCTCAATAAGTAGAGAGGGATTGTTGAGTGAGGTCCAGCATGAAAAACATCAGGAGCTTATGCTAGATTCCTCCATATCACAATCCCGCCGTGGTGAGATGGAGAGAGAGCTGGAGCCGTGGATCCCTGATGAAGATGATCCACGTCCTGAGTTGGAAAATATATTTGATGGACATTGGAATAGGAACTGGGATCAATTTGAAACAAATGAAGCATTATTTGGGGTAAAAAGCACATTTGATGAGGAACTTTACACAACAAAGCTTGAGAAAGGTCCTAAAATGAGAGAGTTGGAAAGGGAAGCTTTACGAATAGCAAGAGAAATTGAGGGTGAGGATACCCAGGATCTGCATGCAGCAGAGGAAAGAGGCATGCAGCCGTATGAAAATTTTGATATTGATGAGGAGACCAGATACTCCTCTGTTTATCGGGGTGAGGTAGTTGATGATAGTGGATACGATGAAGATGAGGATATTTTATTGGATTCACGTAATACTGAGACCTTTGGAGGTTCTCCTGGTTCTGAGCAAAAGAGTTCAATCGATTGGACCAGTGGAAAAGGCAACCATGGAGTTCAGGTGCCTTCAAGCTCTTCATCTGTGGATTACACACACTATTCTGAATCAAATGTCGCCCCAGAGTTATATCGTTCTGGATCTTATGACCATGCTAGGCAGCTGGCATCAGAACCACCTAATAAAAGTTTTGCCAGTACAGCTGGTGAAAGCAGTGAACATGTAGATACCGACAGTGCTACTGACTCTGTAGAAAAGCATATGCTGGCCGGGGACAGTCAAACGTCAAAACCAGATGATTCAGAGAAGACAAAAAATGCATTTGATACAGATGTGCTATCCTCGAATGCCACCTCTTATGCTCTACCTCCTGTTTCATCAAAAGGTCAGGAGAAGATGAGTTCTAGTGAACTGGAGGGTCCAGTGACGGGTAAAGCACATGCACAGACACACACAGTAAATACTCATGGACGACCTGGTAGTTCTGCATCTTCCAATTCAGAATGTGCAGGTGCTGTGTCTGCTTCTGGTGGCCGTGGTTTATCACCAAGCTCATCGCTTGGTTCCTTGTCCTCTGAAAAGTCGACATTGAATCCCAATGCTAAGGAATTCAAATTCAACCCACATGCAAAGAGTTTCGTTCCATCTCAAACCCCTGTTAGGCCTCCTTCCCCAGTGTCGGATGGTTCCTTCTATTATCCAACTAACATGCCTGCTGTACCACATATGCCTGGCATGCCTGTTGGCATTGGAGGACACTCTTTTGCACACCAACCTGTTATGTTTAATCCACAGGTGGGGCAGATGCAAGCACCCCAAGCATATTATCATCCCAATGGGCCTCAGTATGGACAACAGATGCTTCTTGGACACCCTAGACAAGTTGTATACATGCCGAACTACCAACCTGAAATGCCATATAAAGGACGAGATTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009987 GO:0010494 GO:0010603 GO:0016043 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0033043 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0065003 GO:0065007 GO:0070925 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1902115 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LsmAD PAM2 SM-ATX

Protein Analysis

649

Amino Acids

71.2

Weight (kDa)

5.36

Isoelectric Point (pI)

48.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SM-ATX	PF14438	80 - 164	1.5e-27	Ataxin 2 SM domain
LsmAD	PF06741	239 - 309	1.1e-24	LsmAD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54170 AT3G14010 AT3G14010 AT3G14010 AT3G14010 AT3G14010
fragaria_vesca	FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380
malus_domestica	MD09G1186100.v1.1 MD17G1171000.v1.1
prunus_persica	Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1
pyrus_communis	pycom09g10330 pycom12419g00200 pycom12419g00210
rosa_chinensis	RchiOBHm_Chr2g0110201 RchiOBHm_Chr2g0144721
rosa_laevigata	RLG00000020103
rosa_multiflora	Rmu_co8157946.1_g000001 Rmu_sc0013504.1_g000008 Rmu_sc0020351.1_g000001
rosa_roxburghii	Rroxscaffold_2G00101040 Rroxscaffold_3G00222660 Rroxscaffold_7G00205460
rosa_rugosa	Rorug02G0389100 Rorug02G0389100 Rorug02G0389200 Rorug02G0389300
rosa_samantha	Rh2AG440900 Rh2BG451300 Rh2CG220200 Rh2CG428200 Rh2DG461300 Rh3DG266300
rosa_wichuraiana	Rw2G021150 Rw2G036070 Rw7G020140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1511
Acc36I	ACCTGC	1 cut(s)	1511
AccB1I	GGYRCC	1 cut(s)	1075
AccI	GTMKAC	2 cut(s)	1595, 1899
AccII	CGCG	2 cut(s)	238, 246
AciI	CCGC	2 cut(s)	102, 583
AclWI	GGATC	8 cut(s)	300, 313, 613, 626, 629, 696, 849, 1159
AcoI	YGGCCR	3 cut(s)	33, 1278, 1543
AcsI	RAATTY	3 cut(s)	883, 1619, 1625
AfaI	GTAC	2 cut(s)	1210, 1731
AfiI	CCNNNNNNNGG	7 cut(s)	402, 1439, 1671, 1690, 1808, 1859, 1934
AflIII	ACRYGT	3 cut(s)	21, 263, 1231
AgsI	TTSAA	7 cut(s)	367, 698, 1035, 1083, 1603, 1624, 1630
AhdI	GACNNNNNGTC	1 cut(s)	70
AjiI	CACGTC	1 cut(s)	641
AjnI	CCWGG	4 cut(s)	837, 1012, 1486, 1741
AjuI	GAANNNNNNNTTGG	2 cut(s)	699, 731
Alw26I	GTCTC	3 cut(s)	502, 896, 989
AlwI	GGATC	8 cut(s)	300, 313, 613, 626, 629, 696, 849, 1159
AlwNI	CAGNNNCTG	2 cut(s)	844, 1526
AoxI	GGCC	6 cut(s)	33, 103, 1278, 1543, 1673, 1850
ApeKI	GCWGC	4 cut(s)	207, 851, 871, 1171
ApoI	RAATTY	3 cut(s)	883, 1619, 1625
AseI	ATTAAT	1 cut(s)	452
AspS9I	GGNCC	5 cut(s)	529, 770, 1044, 1430, 1850
AsuC2I	CCSGG	1 cut(s)	1282
AsuHPI	GGTGA	6 cut(s)	307, 602, 839, 941, 1229, 1548
AvaII	GGWCC	4 cut(s)	529, 770, 1044, 1430
BaeI	ACNNNNGTAYC	2 cut(s)	1329, 1362
BalI	TGGCCA	1 cut(s)	35
BamHI	GGATCC	2 cut(s)	305, 618
BanI	GGYRCC	1 cut(s)	1075
BauI	CACGAG	1 cut(s)	68
BbsI	GAAGAC	1 cut(s)	1325
BbvI	GCAGC	4 cut(s)	219, 863, 883, 1183
BccI	CCATC	5 cut(s)	383, 589, 659, 1663, 1688
BceAI	ACGGC	4 cut(s)	570, 598, 859, 1530
BciT130I	CCWGG	4 cut(s)	839, 1014, 1488, 1743
BciVI	GTATCC	2 cut(s)	826, 944
BcnI	CCSGG	1 cut(s)	1282
BcoDI	GTCTC	3 cut(s)	502, 896, 989
BfaI	CTAG	5 cut(s)	156, 560, 1167, 1416, 1887
BfmI	CTRYAG	1 cut(s)	1260
BfuAI	ACCTGC	1 cut(s)	1511
BfuI	GTATCC	2 cut(s)	826, 944
BisI	GCNGC	5 cut(s)	103, 208, 852, 872, 1172
BlsI	GCNGC	5 cut(s)	104, 209, 853, 873, 1173
Bme1390I	CCNGG	5 cut(s)	839, 1014, 1282, 1488, 1743
Bme18I	GGWCC	4 cut(s)	529, 770, 1044, 1430
BmeRI	GACNNNNNGTC	1 cut(s)	70
BmgBI	CACGTC	1 cut(s)	641
BmgT120I	GGNCC	5 cut(s)	529, 770, 1044, 1430, 1850
BmiI	GGNNCC	9 cut(s)	307, 394, 438, 612, 620, 1077, 1431, 1576, 1699
BmrFI	CCNGG	5 cut(s)	839, 1014, 1282, 1488, 1743
BmrI	ACTGGG	2 cut(s)	694, 1679
BmsI	GCATC	4 cut(s)	1187, 1508, 1806, 1860
BmuI	ACTGGG	2 cut(s)	694, 1679
BpiI	GAAGAC	1 cut(s)	1325
BpmI	CTGGAG	2 cut(s)	629, 1445
Bpu10I	CCTNAGC	1 cut(s)	1614
BpuEI	CTTGAG	1 cut(s)	782
BpuMI	CCSGG	1 cut(s)	1282
Bsa29I	ATCGAT	1 cut(s)	1038
BsaAI	YACGTR	1 cut(s)	986
BsaI	GGTCTC	2 cut(s)	896, 989
BsaJI	CCNNGG	8 cut(s)	36, 106, 586, 614, 837, 1063, 1281, 1546
BsaWI	WCCGGW	1 cut(s)	317
BsaXI	ACNNNNNCTCC	4 cut(s)	68, 98, 1059, 1089
Bsc4I	CCNNNNNNNGG	7 cut(s)	402, 1439, 1671, 1690, 1808, 1859, 1934
Bse1I	ACTGG	6 cut(s)	689, 1047, 1206, 1428, 1433, 1685
BseBI	CCWGG	4 cut(s)	839, 1014, 1488, 1743
BseCI	ATCGAT	1 cut(s)	1038
BseDI	CCNNGG	8 cut(s)	36, 106, 586, 614, 837, 1063, 1281, 1546
BseGI	GGATG	4 cut(s)	394, 499, 1699, 1840
BseLI	CCNNNNNNNGG	7 cut(s)	402, 1439, 1671, 1690, 1808, 1859, 1934
BseMII	CTCAG	5 cut(s)	19, 636, 984, 1011, 1868
BseNI	ACTGG	6 cut(s)	689, 1047, 1206, 1428, 1433, 1685
BseRI	GAGGAG	2 cut(s)	904, 914
BseXI	GCAGC	4 cut(s)	219, 863, 883, 1183
BsgI	GTGCAG	1 cut(s)	1539
Bsh1236I	CGCG	2 cut(s)	238, 246
BshFI	GGCC	6 cut(s)	35, 105, 1280, 1545, 1675, 1852
BshNI	GGYRCC	1 cut(s)	1075
BshVI	ATCGAT	1 cut(s)	1038
BsiSI	CCGG	2 cut(s)	318, 1281
BslFI	GGGAC	2 cut(s)	62, 1298
BslI	CCNNNNNNNGG	7 cut(s)	402, 1439, 1671, 1690, 1808, 1859, 1934
BsmAI	GTCTC	3 cut(s)	502, 896, 989
BsmFI	GGGAC	2 cut(s)	62, 1298
BsmI	GAATGC	2 cut(s)	343, 1363
BsnI	GGCC	6 cut(s)	35, 105, 1280, 1545, 1675, 1852
Bso31I	GGTCTC	2 cut(s)	896, 989
Bsp143I	GATC	7 cut(s)	241, 305, 618, 634, 688, 841, 1151
Bsp19I	CCATGG	2 cut(s)	36, 1063
BspACI	CCGC	2 cut(s)	102, 583
BspANI	GGCC	6 cut(s)	35, 105, 1280, 1545, 1675, 1852
BspCNI	CTCAG	5 cut(s)	18, 637, 985, 1012, 1867
BspDI	ATCGAT	1 cut(s)	1038
BspFNI	CGCG	2 cut(s)	238, 246
BspLI	GGNNCC	9 cut(s)	307, 394, 438, 612, 620, 1077, 1431, 1576, 1699
BspMI	ACCTGC	1 cut(s)	1511
BspPI	GGATC	8 cut(s)	300, 313, 613, 626, 629, 696, 849, 1159
BspQI	GCTCTTC	1 cut(s)	1093
BspT107I	GGYRCC	1 cut(s)	1075
BspTNI	GGTCTC	2 cut(s)	896, 989
BsrI	ACTGG	6 cut(s)	689, 1047, 1206, 1428, 1433, 1685
BssECI	CCNNGG	8 cut(s)	36, 106, 586, 614, 837, 1063, 1281, 1546
BssMI	GATC	7 cut(s)	241, 305, 618, 634, 688, 841, 1151
BssNAI	GTATAC	1 cut(s)	1900
BssSI	CACGAG	1 cut(s)	68
BssT1I	CCWWGG	2 cut(s)	36, 1063
Bst1107I	GTATAC	1 cut(s)	1900
Bst2BI	CACGAG	1 cut(s)	68
Bst2UI	CCWGG	4 cut(s)	839, 1014, 1488, 1743
Bst4CI	ACNGT	3 cut(s)	1247, 1289, 1468
Bst6I	CTCTTC	1 cut(s)	1093
BstAPI	GCANNNNNTGC	1 cut(s)	338
BstBAI	YACGTR	1 cut(s)	986
BstC8I	GCNNGC	8 cut(s)	376, 849, 869, 1176, 1278, 1725, 1748, 1821
BstDEI	CTNAG	6 cut(s)	5, 645, 993, 1020, 1614, 1854
BstDSI	CCRYGG	5 cut(s)	36, 586, 614, 1063, 1546
BstF5I	GGATG	4 cut(s)	394, 499, 1699, 1840
BstFNI	CGCG	2 cut(s)	238, 246
BstKTI	GATC	7 cut(s)	244, 308, 621, 637, 691, 844, 1154
BstMAI	GTCTC	3 cut(s)	502, 896, 989
BstMBI	GATC	7 cut(s)	241, 305, 618, 634, 688, 841, 1151
BstMWI	GCNNNNNNNGC	6 cut(s)	204, 338, 1211, 1532, 1747, 1829
BstNI	CCWGG	4 cut(s)	839, 1014, 1488, 1743
BstSCI	CCNGG	5 cut(s)	837, 1012, 1280, 1486, 1741
BstSFI	CTRYAG	1 cut(s)	1260
BstUI	CGCG	2 cut(s)	238, 246
BstV1I	GCAGC	4 cut(s)	219, 863, 883, 1183
BstV2I	GAAGAC	1 cut(s)	1325
BstX2I	RGATCY	4 cut(s)	305, 618, 841, 1151
BstYI	RGATCY	4 cut(s)	305, 618, 841, 1151
BstZ17I	GTATAC	1 cut(s)	1900
Bsu15I	ATCGAT	1 cut(s)	1038
BsuI	GTATCC	2 cut(s)	826, 944
BsuRI	GGCC	6 cut(s)	35, 105, 1280, 1545, 1675, 1852
BsuTUI	ATCGAT	1 cut(s)	1038
BtgI	CCRYGG	5 cut(s)	36, 586, 614, 1063, 1546
BtgZI	GCGATG	2 cut(s)	42, 1551
BtrI	CACGTC	1 cut(s)	641
BtsCI	GGATG	4 cut(s)	394, 499, 1699, 1840
BtsI	GCAGTG	1 cut(s)	1231
BtsIMutI	CAGTG	5 cut(s)	1054, 1231, 1252, 1440, 1692
BveI	ACCTGC	1 cut(s)	1511
Cac8I	GCNNGC	8 cut(s)	376, 849, 869, 1176, 1278, 1725, 1748, 1821
CaiI	CAGNNNCTG	2 cut(s)	844, 1526
Cfr13I	GGNCC	5 cut(s)	529, 770, 1044, 1430, 1850
ClaI	ATCGAT	1 cut(s)	1038
CsiI	ACCWGGT	1 cut(s)	1486
Csp6I	GTAC	2 cut(s)	1209, 1730
CviQI	GTAC	2 cut(s)	1209, 1730
DdeI	CTNAG	6 cut(s)	5, 645, 993, 1020, 1614, 1854
DpnI	GATC	7 cut(s)	243, 307, 620, 636, 690, 843, 1153
DpnII	GATC	7 cut(s)	241, 305, 618, 634, 688, 841, 1151
DraI	TTTAAA	1 cut(s)	444
DriI	GACNNNNNGTC	1 cut(s)	70
EaeI	YGGCCR	3 cut(s)	33, 1278, 1543
Eam1104I	CTCTTC	1 cut(s)	1093
Eam1105I	GACNNNNNGTC	1 cut(s)	70
EarI	CTCTTC	1 cut(s)	1093
Eco130I	CCWWGG	2 cut(s)	36, 1063
Eco147I	AGGCCT	1 cut(s)	1675
Eco31I	GGTCTC	2 cut(s)	896, 989
Eco47I	GGWCC	4 cut(s)	529, 770, 1044, 1430
EcoO109I	RGGNCCY	1 cut(s)	770
EcoRI	GAATTC	1 cut(s)	1619
EcoRII	CCWGG	4 cut(s)	837, 1012, 1486, 1741
EcoT14I	CCWWGG	2 cut(s)	36, 1063
EcoT22I	ATGCAT	1 cut(s)	1333
ErhI	CCWWGG	2 cut(s)	36, 1063
FalI	AAGNNNNNCTT	2 cut(s)	784, 816
FaqI	GGGAC	2 cut(s)	62, 1298
FauI	CCCGC	1 cut(s)	590
FauNDI	CATATG	2 cut(s)	1272, 1737
FblI	GTMKAC	2 cut(s)	1595, 1899
Fnu4HI	GCNGC	5 cut(s)	103, 208, 852, 872, 1172
FokI	GGATG	4 cut(s)	401, 506, 1706, 1827
Fsp4HI	GCNGC	5 cut(s)	103, 208, 852, 872, 1172
FspBI	CTAG	5 cut(s)	156, 560, 1167, 1416, 1887
GluI	GCNGC	5 cut(s)	103, 208, 852, 872, 1172
GsuI	CTGGAG	2 cut(s)	629, 1445
HaeIII	GGCC	6 cut(s)	35, 105, 1280, 1545, 1675, 1852
HapII	CCGG	2 cut(s)	318, 1281
HincII	GTYRAC	1 cut(s)	1596
HindII	GTYRAC	1 cut(s)	1596
HindIII	AAGCTT	3 cut(s)	131, 758, 798
HinfI	GANTC	9 cut(s)	229, 357, 422, 563, 980, 1118, 1256, 1310, 1603
HpaII	CCGG	2 cut(s)	318, 1281
HphI	GGTGA	6 cut(s)	307, 602, 839, 941, 1229, 1548
Hpy166II	GTNNAC	4 cut(s)	1229, 1421, 1596, 1900
Hpy188III	TCNNGA	5 cut(s)	163, 548, 644, 1149, 1400
Hpy8I	GTNNAC	4 cut(s)	1229, 1421, 1596, 1900
HpyAV	CCTTC	6 cut(s)	178, 243, 471, 1089, 1689, 1711
HpyCH4III	ACNGT	3 cut(s)	1247, 1289, 1468
HpyCH4IV	ACGT	3 cut(s)	640, 985, 1295
HpyF10VI	GCNNNNNNNGC	6 cut(s)	204, 338, 1211, 1532, 1747, 1829
HpyF3I	CTNAG	6 cut(s)	5, 645, 993, 1020, 1614, 1854
HpySE526I	ACGT	3 cut(s)	640, 985, 1295
Kzo9I	GATC	7 cut(s)	241, 305, 618, 634, 688, 841, 1151
LguI	GCTCTTC	1 cut(s)	1093
LmnI	GCTCC	3 cut(s)	442, 550, 610
Lsp1109I	GCAGC	4 cut(s)	219, 863, 883, 1183
LweI	GCATC	4 cut(s)	1187, 1508, 1806, 1860
MabI	ACCWGGT	1 cut(s)	1486
MaeI	CTAG	5 cut(s)	156, 560, 1167, 1416, 1887
MaeII	ACGT	3 cut(s)	640, 985, 1295
MaeIII	GTNAC	2 cut(s)	218, 1435
MalI	GATC	7 cut(s)	243, 307, 620, 636, 690, 843, 1153
MboI	GATC	7 cut(s)	241, 305, 618, 634, 688, 841, 1151
MboII	GAAGA	6 cut(s)	641, 971, 1080, 1330, 1417, 1494
MflI	RGATCY	4 cut(s)	305, 618, 841, 1151
MlsI	TGGCCA	1 cut(s)	35
MluCI	AATT	7 cut(s)	453, 692, 819, 883, 1507, 1619, 1625
MluNI	TGGCCA	1 cut(s)	35
MlyI	GAGTC	2 cut(s)	238, 1250
MmeI	TCCRAC	4 cut(s)	630, 768, 1671, 1736
Mox20I	TGGCCA	1 cut(s)	35
Mph1103I	ATGCAT	1 cut(s)	1333
MscI	TGGCCA	1 cut(s)	35
MseI	TTAA	7 cut(s)	129, 138, 257, 443, 452, 1797, 1948
MslI	CAYNNNNRTG	1 cut(s)	1845
Msp20I	TGGCCA	1 cut(s)	35
MspA1I	CMGCKG	2 cut(s)	1174, 1214
MspI	CCGG	2 cut(s)	318, 1281
MspR9I	CCNGG	5 cut(s)	839, 1014, 1282, 1488, 1743
Mva1269I	GAATGC	2 cut(s)	343, 1363
MvaI	CCWGG	4 cut(s)	839, 1014, 1488, 1743
MvnI	CGCG	2 cut(s)	238, 246
MwoI	GCNNNNNNNGC	6 cut(s)	204, 338, 1211, 1532, 1747, 1829
NciI	CCSGG	1 cut(s)	1282
NcoI	CCATGG	2 cut(s)	36, 1063
NdeI	CATATG	2 cut(s)	1272, 1737
NdeII	GATC	7 cut(s)	241, 305, 618, 634, 688, 841, 1151
NlaIV	GGNNCC	9 cut(s)	307, 394, 438, 612, 620, 1077, 1431, 1576, 1699
NmuCI	GTSAC	1 cut(s)	1435
NsiI	ATGCAT	1 cut(s)	1333
PaeI	GCATGC	3 cut(s)	851, 871, 1750
PaqCI	CACCTGC	1 cut(s)	1511
PceI	AGGCCT	1 cut(s)	1675
PciI	ACATGT	3 cut(s)	21, 263, 1231
PciSI	GCTCTTC	1 cut(s)	1093
PcsI	WCGNNNNNNNCGW	1 cut(s)	24
PctI	GAATGC	2 cut(s)	343, 1363
PfeI	GAWTC	7 cut(s)	357, 422, 563, 980, 1118, 1310, 1603
PkrI	GCNGC	5 cut(s)	104, 209, 853, 873, 1173
PleI	GAGTC	2 cut(s)	237, 1250
PpsI	GAGTC	2 cut(s)	237, 1250
Ppu21I	YACGTR	1 cut(s)	986
PpuMI	RGGWCCY	1 cut(s)	770
PscI	ACATGT	3 cut(s)	21, 263, 1231
PshBI	ATTAAT	1 cut(s)	452
Psp5II	RGGWCCY	1 cut(s)	770
Psp6I	CCWGG	4 cut(s)	837, 1012, 1486, 1741
PspGI	CCWGG	4 cut(s)	837, 1012, 1486, 1741
PspN4I	GGNNCC	9 cut(s)	307, 394, 438, 612, 620, 1077, 1431, 1576, 1699
PspPI	GGNCC	5 cut(s)	529, 770, 1044, 1430, 1850
PspPPI	RGGWCCY	1 cut(s)	770
PstNI	CAGNNNCTG	2 cut(s)	844, 1526
PsuI	RGATCY	4 cut(s)	305, 618, 841, 1151
PvuII	CAGCTG	2 cut(s)	1174, 1214
RsaI	GTAC	2 cut(s)	1210, 1731
RsaNI	GTAC	2 cut(s)	1209, 1730
RseI	CAYNNNNRTG	1 cut(s)	1845
SalI	GTCGAC	1 cut(s)	1594
SapI	GCTCTTC	1 cut(s)	1093
SaqAI	TTAA	7 cut(s)	129, 138, 257, 443, 452, 1797, 1948
SatI	GCNGC	5 cut(s)	103, 208, 852, 872, 1172
Sau3AI	GATC	7 cut(s)	241, 305, 618, 634, 688, 841, 1151
Sau96I	GGNCC	5 cut(s)	529, 770, 1044, 1430, 1850
SchI	GAGTC	2 cut(s)	238, 1250
ScrFI	CCNGG	5 cut(s)	839, 1014, 1282, 1488, 1743
SexAI	ACCWGGT	1 cut(s)	1486
SfaNI	GCATC	4 cut(s)	1187, 1508, 1806, 1860
SfcI	CTRYAG	1 cut(s)	1260
SinI	GGWCC	4 cut(s)	529, 770, 1044, 1430
SmiMI	CAYNNNNRTG	1 cut(s)	1845
SmlI	CTYRAG	1 cut(s)	761
SmoI	CTYRAG	1 cut(s)	761
SphI	GCATGC	3 cut(s)	851, 871, 1750
Sse9I	AATT	7 cut(s)	453, 692, 819, 883, 1507, 1619, 1625
SseBI	AGGCCT	1 cut(s)	1675
SsiI	CCGC	2 cut(s)	102, 583
SspI	AATATT	1 cut(s)	324
SspMI	CTAG	5 cut(s)	156, 560, 1167, 1416, 1887
StuI	AGGCCT	1 cut(s)	1675
StyD4I	CCNGG	5 cut(s)	837, 1012, 1280, 1486, 1741
StyI	CCWWGG	2 cut(s)	36, 1063
TaaI	ACNGT	3 cut(s)	1247, 1289, 1468
TaiI	ACGT	3 cut(s)	643, 988, 1298
TaqI	TCGA	4 cut(s)	162, 1038, 1355, 1595
TasI	AATT	7 cut(s)	453, 692, 819, 883, 1507, 1619, 1625
TatI	WGTACW	1 cut(s)	1208
TauI	GCSGC	1 cut(s)	105
TfiI	GAWTC	7 cut(s)	357, 422, 563, 980, 1118, 1310, 1603
Tru1I	TTAA	7 cut(s)	129, 138, 257, 443, 452, 1797, 1948
Tru9I	TTAA	7 cut(s)	129, 138, 257, 443, 452, 1797, 1948
TscAI	CASTG	5 cut(s)	1054, 1231, 1252, 1440, 1692
TseFI	GTSAC	1 cut(s)	1435
TseI	GCWGC	4 cut(s)	207, 851, 871, 1171
Tsp45I	GTSAC	1 cut(s)	1435
TspDTI	ATGAA	9 cut(s)	115, 317, 552, 642, 720, 894, 972, 1080, 1377
TspRI	CASTG	5 cut(s)	1054, 1231, 1252, 1440, 1692
VpaK11BI	GGWCC	4 cut(s)	529, 770, 1044, 1430
VspI	ATTAAT	1 cut(s)	452
XapI	RAATTY	3 cut(s)	883, 1619, 1625
XmiI	GTMKAC	2 cut(s)	1595, 1899
XspI	CTAG	5 cut(s)	156, 560, 1167, 1416, 1887
Zsp2I	ATGCAT	1 cut(s)	1333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.