Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0002232

Physical Location & Seq

Genomic Coordinates Forward (+)

16149177 .. 16157179

Gene Structure 8003 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1186100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGAATGCACAACAACCTCCCCATCATAAATCTTCTGCTAATGGTTTTGGCCGTCGAAGAGGTGAGAGAGAAGGGGGGCCTAGGGTCGAGAATAAGTCGAAGTCTGGAGCAGAAAACCACAGCAGATTAACAAGCAACAAATCTGGGAACTCTGAGAGTCCTTCACGTGATCGATTAGTATATATGACCACATGTCTTATTGGGCATAATGTGGAAGTCCAGGTGAAAAATGGATCTGTATACTCTGGAATATTTCATGCAACAAACGCTGAAAAAGACTTTGGAATCATCTTGAAAATGGCACGAATGATAAAGGATGGTTTAGTACGTGGACAAAAGTCTATGACAGAGTCAATTAGCAAGGCTCCGTCAAAGACTTTAATTATACCTGCCAAAGAACTTGTACAAGTTATCGCAAAGGATGTCTCAATAACAAGGGATGGATTGTTAAATGAGGTTCAGCATGAAAAACATCAGGAACTTATGATAGATTCCTTCATATCACAATCCCGCCGTGGTGAGTTGGAGAGAGAGCTGGAACCGTGGGTGCCTGATGAAGATGATCCACAATGTCCTGAATTGGAAAATATATTTGATGGACAATGGAATAGGAAATGGGATCAATTTGAAACAAATGAAACATTATTTGGGGTAAAAAGCACATTTGACGCAGACCTTTACACAACTAAACTTGCGAAGGGCCCTCAAACAAAAGAGTTGGAAAGGGAAGCTTTGAGAATAGCAAGAGAAATTGAGGGTGAGGATACACCTGATCTGCATATGGCAGAGGAAAGAGGCATTCACCTCCATGTGGATATTGATGAGGAGACAAGATTCTCCTCTGTTTATCGGGGGGAAGTAGTTGATGATAGTGGATATGATGAAGATGAGGATATTTTGTTGGATACATGTAATACTGAAACCTTTGGAGATTCTACTGGTTCTTTAAGGAAGAGTTCAATGGACTGGACCACTGGAAAAAGCAACAATGGGGTGCCATCAAGCTCTTCATTTGTGGATTACTCACAATCTTCTGAGTCAAATGTTGCCCCAGATTTATGTCGCTCTGGATCTTATGACCATGCTAGACAGCTGGCGTCAGAAACACTTTTCAAGAGCTTCCCCAGTACAGATGGTGAAAGCAGTGAACATGGCGAGGTGGATAGTGCTGCTGGGTCTGTTGTAAAGGCGAAGCTAGCTGAAGACAATCAAACATCAAAACCAGACGATTCACAGCCATCATTGAATGGGAAGGAAGATGCGTTTGAGAAAGGGGGTTTATCCTCTGGTGCCACCTCTTATGCTCCTGGTCAGGCTTCATCAAAAGGTCATGAGAAGACGGGTTATAGCGACCCAGTGACTGGCAAATCACACGTTCAAACACAGACGGTAAATTCTCATGGACGACCTGGTAGTTCTGCATCTTCCAATTCGGAATTCCCAGCTGCTGCCTCAGCTTCTGGTGGACCTGGTTTATCACCAAGCTCATCTCGGGGTTCGTTGTCCTCTGAAAAGTCAACATTGAATCCCCATGCGAAGGAATTCAAACTCAATCCGCATGCAAAGAGTTTTGTTCCATCTCAAGCGCCTGTTAGGGCTCCATCCCCAGTGTCTGATGGCTCCTTCTATTATCCAACTAATGCACCTGCTGTACCACATATGCCGGTCATGCCTGCTGGAATTGGAGTTGGGCCCTCTTTCGGACACCAACCCGTTATGTTTAATCCACAGCAAGCACCCCAAGCCTATTTTCATCCAAATGGGCCCCAGTATGGGCAACAGATGCTTCATCCTAGGCAAGTAGTATACATGCCAAACTACCAACCTGAAATGCCGTACAAAGCACGAGATTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009987 GO:0010494 GO:0010603 GO:0016043 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0033043 GO:0034063 GO:0034622 GO:0035770 GO:0036464 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0065003 GO:0065007 GO:0070925 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1902115 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LsmAD PAM2 SM-ATX

Protein Analysis

619

Amino Acids

67.44

Weight (kDa)

5.5

Isoelectric Point (pI)

48.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SM-ATX	PF14438	56 - 140	2.7e-28	Ataxin 2 SM domain
LsmAD	PF06741	216 - 284	3.3e-22	LsmAD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54170 AT3G14010 AT3G14010 AT3G14010 AT3G14010 AT3G14010
fragaria_vesca	FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380 FvH4_6g34380
malus_domestica	MD09G1186100.v1.1 MD17G1171000.v1.1
prunus_persica	Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1 Prupe.7G067500_v2.0.a1
pyrus_communis	pycom09g10330 pycom12419g00200 pycom12419g00210
rosa_chinensis	RchiOBHm_Chr2g0110201 RchiOBHm_Chr2g0144721
rosa_laevigata	RLG00000020103
rosa_multiflora	Rmu_co8157946.1_g000001 Rmu_sc0013504.1_g000008 Rmu_sc0020351.1_g000001
rosa_roxburghii	Rroxscaffold_2G00101040 Rroxscaffold_3G00222660 Rroxscaffold_7G00205460
rosa_rugosa	Rorug02G0389100 Rorug02G0389100 Rorug02G0389200 Rorug02G0389300
rosa_samantha	Rh2AG440900 Rh2BG451300 Rh2CG220200 Rh2CG428200 Rh2DG461300 Rh3DG266300
rosa_wichuraiana	Rw2G021150 Rw2G036070 Rw7G020140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1654
Acc36I	ACCTGC	2 cut(s)	397, 1654
AccB1I	GGYRCC	3 cut(s)	547, 994, 1289
AccB7I	CCANNNNNTGG	1 cut(s)	1361
AccI	GTMKAC	2 cut(s)	240, 1806
AciI	CCGC	2 cut(s)	511, 1556
AclWI	GGATC	4 cut(s)	241, 557, 627, 1078
AcoI	YGGCCR	1 cut(s)	49
AcsI	RAATTY	3 cut(s)	1393, 1436, 1541
AcuI	CTGAAG	1 cut(s)	1221
AcvI	CACGTG	1 cut(s)	167
AcyI	GRCGYC	1 cut(s)	1097
AfaI	GTAC	5 cut(s)	327, 405, 1129, 1653, 1838
AfiI	CCNNNNNNNGG	6 cut(s)	811, 1361, 1537, 1700, 1772, 1773
AflIII	ACRYGT	3 cut(s)	191, 908, 1372
AgsI	TTSAA	8 cut(s)	295, 629, 960, 1114, 1246, 1379, 1525, 1546
AhdI	GACNNNNNGTC	1 cut(s)	192
AjnI	CCWGG	4 cut(s)	219, 1306, 1408, 1468
AjuI	GAANNNNNNNTTGG	8 cut(s)	264, 296, 630, 662, 1421, 1453, 1734, 1766
Alw26I	GTCTC	2 cut(s)	430, 821
AlwI	GGATC	4 cut(s)	241, 557, 627, 1078
AlwNI	CAGNNNCTG	4 cut(s)	1361, 1448, 1460, 1613
Ama87I	CYCGRG	1 cut(s)	1491
AoxI	GGCC	5 cut(s)	49, 77, 700, 1691, 1763
ApaI	GGGCCC	3 cut(s)	704, 1695, 1767
ApeKI	GCWGC	3 cut(s)	1169, 1445, 1448
ApoI	RAATTY	3 cut(s)	1393, 1436, 1541
Asp700I	GAANNNNTTC	1 cut(s)	1541
AspA2I	CCTAGG	2 cut(s)	80, 1793
AspLEI	GCGC	1 cut(s)	1588
AspS9I	GGNCC	9 cut(s)	77, 700, 701, 969, 1466, 1691, 1692, 1763, 1764
AsuHPI	GGTGA	7 cut(s)	74, 235, 530, 770, 794, 1148, 1470
AsuNHI	GCTAGC	1 cut(s)	1195
AvaI	CYCGRG	1 cut(s)	1491
AvaII	GGWCC	2 cut(s)	969, 1466
AvrII	CCTAGG	2 cut(s)	80, 1793
BaeGI	GKGCMC	3 cut(s)	704, 1695, 1767
BanI	GGYRCC	3 cut(s)	547, 994, 1289
BanII	GRGCYC	4 cut(s)	704, 1600, 1695, 1767
BauI	CACGAG	1 cut(s)	1845
BbrPI	CACGTG	1 cut(s)	167
BbsI	GAAGAC	2 cut(s)	1209, 1343
BbvCI	CCTCAGC	1 cut(s)	1453
BbvI	GCAGC	3 cut(s)	1156, 1432, 1435
BceAI	ACGGC	3 cut(s)	36, 498, 1819
BciT130I	CCWGG	4 cut(s)	221, 1308, 1410, 1470
BciVI	GTATCC	2 cut(s)	757, 898
BcoDI	GTCTC	2 cut(s)	430, 821
BfaI	CTAG	4 cut(s)	81, 1086, 1196, 1794
BfoI	RGCGCY	1 cut(s)	1589
BfuAI	ACCTGC	2 cut(s)	397, 1654
BfuI	GTATCC	2 cut(s)	757, 898
BisI	GCNGC	3 cut(s)	1170, 1446, 1449
BlnI	CCTAGG	2 cut(s)	80, 1793
BlsI	GCNGC	3 cut(s)	1171, 1447, 1450
Bme1390I	CCNGG	4 cut(s)	221, 1308, 1410, 1470
Bme18I	GGWCC	2 cut(s)	969, 1466
BmeRI	GACNNNNNGTC	1 cut(s)	192
BmeT110I	CYCGRG	1 cut(s)	1491
BmgT120I	GGNCC	9 cut(s)	77, 700, 701, 969, 1466, 1691, 1692, 1763, 1764
BmrFI	CCNGG	4 cut(s)	221, 1308, 1410, 1470
BmrI	ACTGGG	4 cut(s)	1119, 1349, 1601, 1762
BmsI	GCATC	3 cut(s)	1249, 1430, 1773
BmtI	GCTAGC	1 cut(s)	1199
BmuI	ACTGGG	4 cut(s)	1119, 1349, 1601, 1762
BoxI	GACNNNNGTC	1 cut(s)	337
BpiI	GAAGAC	2 cut(s)	1209, 1343
BpmI	CTGGAG	1 cut(s)	126
Bpu10I	CCTNAGC	1 cut(s)	1453
BpuEI	CTTGAG	1 cut(s)	1566
Bsa29I	ATCGAT	1 cut(s)	172
BsaAI	YACGTR	2 cut(s)	167, 329
BsaHI	GRCGYC	1 cut(s)	1097
BsaJI	CCNNGG	4 cut(s)	80, 514, 542, 1793
Bsc4I	CCNNNNNNNGG	6 cut(s)	811, 1361, 1537, 1700, 1772, 1773
Bse118I	RCCGGY	1 cut(s)	1663
Bse1I	ACTGG	8 cut(s)	943, 971, 979, 1125, 1355, 1366, 1607, 1768
BseBI	CCWGG	4 cut(s)	221, 1308, 1410, 1470
BseCI	ATCGAT	1 cut(s)	172
BseDI	CCNNGG	4 cut(s)	80, 514, 542, 1793
BseGI	GGATG	6 cut(s)	322, 427, 445, 1601, 1753, 1789
BseLI	CCNNNNNNNGG	6 cut(s)	811, 1361, 1537, 1700, 1772, 1773
BseMII	CTCAG	3 cut(s)	144, 1026, 1467
BseNI	ACTGG	8 cut(s)	943, 971, 979, 1125, 1355, 1366, 1607, 1768
BseRI	GAGGAG	2 cut(s)	829, 839
BseSI	GKGCMC	3 cut(s)	704, 1695, 1767
BseXI	GCAGC	3 cut(s)	1156, 1432, 1435
BseYI	CCCAGC	2 cut(s)	1172, 1441
BshFI	GGCC	5 cut(s)	51, 79, 702, 1693, 1765
BshNI	GGYRCC	3 cut(s)	547, 994, 1289
BshVI	ATCGAT	1 cut(s)	172
BsiHKCI	CYCGRG	1 cut(s)	1491
BsiSI	CCGG	1 cut(s)	1664
BslI	CCNNNNNNNGG	6 cut(s)	811, 1361, 1537, 1700, 1772, 1773
BsmAI	GTCTC	2 cut(s)	430, 821
BsmI	GAATGC	2 cut(s)	10, 798
BsnI	GGCC	5 cut(s)	51, 79, 702, 1693, 1765
BsoBI	CYCGRG	1 cut(s)	1491
Bsp120I	GGGCCC	3 cut(s)	700, 1691, 1763
Bsp1286I	GDGCHC	4 cut(s)	704, 1600, 1695, 1767
Bsp1407I	TGTACA	1 cut(s)	403
Bsp143I	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
BspACI	CCGC	2 cut(s)	511, 1556
BspANI	GGCC	5 cut(s)	51, 79, 702, 1693, 1765
BspCNI	CTCAG	3 cut(s)	145, 1027, 1466
BspDI	ATCGAT	1 cut(s)	172
BspHI	TCATGA	1 cut(s)	1330
BspMI	ACCTGC	2 cut(s)	397, 1654
BspOI	GCTAGC	1 cut(s)	1199
BspPI	GGATC	4 cut(s)	241, 557, 627, 1078
BspQI	GCTCTTC	1 cut(s)	1012
BspT107I	GGYRCC	3 cut(s)	547, 994, 1289
BsrFI	RCCGGY	1 cut(s)	1663
BsrGI	TGTACA	1 cut(s)	403
BsrI	ACTGG	8 cut(s)	943, 971, 979, 1125, 1355, 1366, 1607, 1768
BssAI	RCCGGY	1 cut(s)	1663
BssECI	CCNNGG	4 cut(s)	80, 514, 542, 1793
BssMI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
BssNAI	GTATAC	2 cut(s)	241, 1807
BssNI	GRCGYC	1 cut(s)	1097
BssSI	CACGAG	1 cut(s)	1845
BssT1I	CCWWGG	2 cut(s)	80, 1793
Bst1107I	GTATAC	2 cut(s)	241, 1807
Bst2BI	CACGAG	1 cut(s)	1845
Bst2UI	CCWGG	4 cut(s)	221, 1308, 1410, 1470
Bst4CI	ACNGT	2 cut(s)	543, 1390
Bst6I	CTCTTC	3 cut(s)	52, 947, 1012
BstACI	GRCGYC	1 cut(s)	1097
BstAPI	GCANNNNNTGC	1 cut(s)	1783
BstAUI	TGTACA	1 cut(s)	403
BstBAI	YACGTR	2 cut(s)	167, 329
BstC8I	GCNNGC	5 cut(s)	1095, 1197, 1560, 1674, 1734
BstDEI	CTNAG	3 cut(s)	153, 1035, 1453
BstDSI	CCRYGG	2 cut(s)	514, 542
BstF5I	GGATG	6 cut(s)	322, 427, 445, 1601, 1753, 1789
BstH2I	RGCGCY	1 cut(s)	1589
BstHHI	GCGC	1 cut(s)	1588
BstKTI	GATC	6 cut(s)	172, 236, 565, 622, 775, 1073
BstMAI	GTCTC	2 cut(s)	430, 821
BstMBI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
BstMWI	GCNNNNNNNGC	6 cut(s)	266, 1196, 1454, 1669, 1742, 1783
BstNI	CCWGG	4 cut(s)	221, 1308, 1410, 1470
BstNSI	RCATGY	4 cut(s)	195, 912, 1562, 1813
BstPAI	GACNNNNGTC	1 cut(s)	337
BstSCI	CCNGG	4 cut(s)	219, 1306, 1408, 1468
BstSLI	GKGCMC	3 cut(s)	704, 1695, 1767
BstV1I	GCAGC	3 cut(s)	1156, 1432, 1435
BstV2I	GAAGAC	2 cut(s)	1209, 1343
BstX2I	RGATCY	2 cut(s)	233, 1070
BstYI	RGATCY	2 cut(s)	233, 1070
BstZ17I	GTATAC	2 cut(s)	241, 1807
Bsu15I	ATCGAT	1 cut(s)	172
BsuI	GTATCC	2 cut(s)	757, 898
BsuRI	GGCC	5 cut(s)	51, 79, 702, 1693, 1765
BsuTUI	ATCGAT	1 cut(s)	172
BtgI	CCRYGG	2 cut(s)	514, 542
BtsCI	GGATG	6 cut(s)	322, 427, 445, 1601, 1753, 1789
BtsI	GCAGTG	1 cut(s)	1150
BtsIMutI	CAGTG	4 cut(s)	972, 1150, 1362, 1614
BveI	ACCTGC	2 cut(s)	397, 1654
Cac8I	GCNNGC	5 cut(s)	1095, 1197, 1560, 1674, 1734
CaiI	CAGNNNCTG	4 cut(s)	1361, 1448, 1460, 1613
CciI	TCATGA	1 cut(s)	1330
CfoI	GCGC	1 cut(s)	1588
Cfr10I	RCCGGY	1 cut(s)	1663
Cfr13I	GGNCC	9 cut(s)	77, 700, 701, 969, 1466, 1691, 1692, 1763, 1764
ClaI	ATCGAT	1 cut(s)	172
CseI	GACGC	2 cut(s)	677, 1086
CsiI	ACCWGGT	2 cut(s)	1408, 1468
Csp6I	GTAC	5 cut(s)	326, 404, 1128, 1652, 1837
CviQI	GTAC	5 cut(s)	326, 404, 1128, 1652, 1837
DdeI	CTNAG	3 cut(s)	153, 1035, 1453
DpnI	GATC	6 cut(s)	171, 235, 564, 621, 774, 1072
DpnII	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
DriI	GACNNNNNGTC	1 cut(s)	192
EaeI	YGGCCR	1 cut(s)	49
Eam1104I	CTCTTC	3 cut(s)	52, 947, 1012
Eam1105I	GACNNNNNGTC	1 cut(s)	192
EarI	CTCTTC	3 cut(s)	52, 947, 1012
Eco130I	CCWWGG	2 cut(s)	80, 1793
Eco24I	GRGCYC	4 cut(s)	704, 1600, 1695, 1767
Eco47I	GGWCC	2 cut(s)	969, 1466
Eco57I	CTGAAG	1 cut(s)	1221
Eco72I	CACGTG	1 cut(s)	167
Eco88I	CYCGRG	1 cut(s)	1491
EcoO109I	RGGNCCY	5 cut(s)	77, 700, 701, 1692, 1764
EcoRI	GAATTC	2 cut(s)	1436, 1541
EcoRII	CCWGG	4 cut(s)	219, 1306, 1408, 1468
EcoT14I	CCWWGG	2 cut(s)	80, 1793
EcoT38I	GRGCYC	4 cut(s)	704, 1600, 1695, 1767
ErhI	CCWWGG	2 cut(s)	80, 1793
FalI	AAGNNNNNCTT	2 cut(s)	715, 747
FauI	CCCGC	1 cut(s)	518
FauNDI	CATATG	2 cut(s)	780, 1659
FblI	GTMKAC	2 cut(s)	240, 1806
Fnu4HI	GCNGC	3 cut(s)	1170, 1446, 1449
FokI	GGATG	6 cut(s)	329, 434, 452, 1588, 1740, 1776
FriOI	GRGCYC	4 cut(s)	704, 1600, 1695, 1767
Fsp4HI	GCNGC	3 cut(s)	1170, 1446, 1449
FspBI	CTAG	4 cut(s)	81, 1086, 1196, 1794
GlaI	GCGC	1 cut(s)	1587
GluI	GCNGC	3 cut(s)	1170, 1446, 1449
GsaI	CCCAGC	2 cut(s)	1176, 1445
GsuI	CTGGAG	1 cut(s)	126
HaeII	RGCGCY	1 cut(s)	1589
HaeIII	GGCC	5 cut(s)	51, 79, 702, 1693, 1765
HapII	CCGG	1 cut(s)	1664
HgaI	GACGC	2 cut(s)	677, 1086
HhaI	GCGC	1 cut(s)	1588
Hin1I	GRCGYC	1 cut(s)	1097
Hin6I	GCGC	1 cut(s)	1586
HinP1I	GCGC	1 cut(s)	1586
HincII	GTYRAC	1 cut(s)	1518
HindII	GTYRAC	1 cut(s)	1518
HindIII	AAGCTT	1 cut(s)	729
HinfI	GANTC	9 cut(s)	157, 285, 350, 491, 834, 932, 1037, 1229, 1525
HpaII	CCGG	1 cut(s)	1664
HphI	GGTGA	7 cut(s)	74, 235, 530, 770, 794, 1148, 1470
Hpy166II	GTNNAC	6 cut(s)	241, 332, 1148, 1466, 1518, 1807
Hpy188I	TCNGA	7 cut(s)	154, 1036, 1102, 1435, 1510, 1615, 1703
Hpy188III	TCNNGA	9 cut(s)	88, 105, 246, 292, 476, 575, 1068, 1114, 1331
Hpy8I	GTNNAC	6 cut(s)	241, 332, 1148, 1466, 1518, 1807
Hpy99I	CGWCG	1 cut(s)	57
HpyAV	CCTTC	7 cut(s)	65, 171, 505, 691, 1246, 1531, 1633
HpyCH4III	ACNGT	2 cut(s)	543, 1390
HpyCH4IV	ACGT	3 cut(s)	166, 328, 1374
HpyCH4V	TGCA	6 cut(s)	8, 260, 778, 1421, 1562, 1643
HpyF10VI	GCNNNNNNNGC	6 cut(s)	266, 1196, 1454, 1669, 1742, 1783
HpyF3I	CTNAG	3 cut(s)	153, 1035, 1453
HpySE526I	ACGT	3 cut(s)	166, 328, 1374
Hsp92I	GRCGYC	1 cut(s)	1097
HspAI	GCGC	1 cut(s)	1586
Kzo9I	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
LguI	GCTCTTC	1 cut(s)	1012
LmnI	GCTCC	5 cut(s)	107, 370, 1309, 1603, 1625
Lsp1109I	GCAGC	3 cut(s)	1156, 1432, 1435
LweI	GCATC	3 cut(s)	1249, 1430, 1773
MabI	ACCWGGT	2 cut(s)	1408, 1468
MaeI	CTAG	4 cut(s)	81, 1086, 1196, 1794
MaeII	ACGT	3 cut(s)	166, 328, 1374
MaeIII	GTNAC	1 cut(s)	1357
MalI	GATC	6 cut(s)	171, 235, 564, 621, 774, 1072
MboI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
MflI	RGATCY	2 cut(s)	233, 1070
MhlI	GDGCHC	4 cut(s)	704, 1600, 1695, 1767
MlyI	GAGTC	3 cut(s)	166, 359, 1046
MmeI	TCCRAC	4 cut(s)	504, 699, 882, 1658
MroXI	GAANNNNTTC	1 cut(s)	1541
MseI	TTAA	5 cut(s)	128, 380, 449, 947, 1722
MslI	CAYNNNNRTG	2 cut(s)	807, 1758
MspA1I	CMGCKG	2 cut(s)	1093, 1445
MspI	CCGG	1 cut(s)	1664
MspR9I	CCNGG	4 cut(s)	221, 1308, 1410, 1470
Mva1269I	GAATGC	2 cut(s)	10, 798
MvaI	CCWGG	4 cut(s)	221, 1308, 1410, 1470
MwoI	GCNNNNNNNGC	6 cut(s)	266, 1196, 1454, 1669, 1742, 1783
NdeI	CATATG	2 cut(s)	780, 1659
NdeII	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
NheI	GCTAGC	1 cut(s)	1195
NmuCI	GTSAC	1 cut(s)	1357
NspI	RCATGY	4 cut(s)	195, 912, 1562, 1813
PaeI	GCATGC	1 cut(s)	1562
PagI	TCATGA	1 cut(s)	1330
PaqCI	CACCTGC	1 cut(s)	1654
PciI	ACATGT	2 cut(s)	191, 908
PciSI	GCTCTTC	1 cut(s)	1012
PctI	GAATGC	2 cut(s)	10, 798
PdmI	GAANNNNTTC	1 cut(s)	1541
PfeI	GAWTC	6 cut(s)	285, 491, 834, 932, 1229, 1525
PflFI	GACNNNGTC	1 cut(s)	349
PflMI	CCANNNNNTGG	1 cut(s)	1361
PkrI	GCNGC	3 cut(s)	1171, 1447, 1450
PleI	GAGTC	3 cut(s)	165, 358, 1045
PmaCI	CACGTG	1 cut(s)	167
PmlI	CACGTG	1 cut(s)	167
PpsI	GAGTC	3 cut(s)	165, 358, 1045
Ppu21I	YACGTR	2 cut(s)	167, 329
PscI	ACATGT	2 cut(s)	191, 908
PshAI	GACNNNNGTC	1 cut(s)	337
Psp6I	CCWGG	4 cut(s)	219, 1306, 1408, 1468
PspCI	CACGTG	1 cut(s)	167
PspFI	CCCAGC	2 cut(s)	1172, 1441
PspGI	CCWGG	4 cut(s)	219, 1306, 1408, 1468
PspOMI	GGGCCC	3 cut(s)	700, 1691, 1763
PspPI	GGNCC	9 cut(s)	77, 700, 701, 969, 1466, 1691, 1692, 1763, 1764
PstNI	CAGNNNCTG	4 cut(s)	1361, 1448, 1460, 1613
PsuI	RGATCY	2 cut(s)	233, 1070
PsyI	GACNNNGTC	1 cut(s)	349
PvuII	CAGCTG	2 cut(s)	1093, 1445
RsaI	GTAC	5 cut(s)	327, 405, 1129, 1653, 1838
RsaNI	GTAC	5 cut(s)	326, 404, 1128, 1652, 1837
RseI	CAYNNNNRTG	2 cut(s)	807, 1758
SapI	GCTCTTC	1 cut(s)	1012
SaqAI	TTAA	5 cut(s)	128, 380, 449, 947, 1722
SatI	GCNGC	3 cut(s)	1170, 1446, 1449
Sau3AI	GATC	6 cut(s)	169, 233, 562, 619, 772, 1070
Sau96I	GGNCC	9 cut(s)	77, 700, 701, 969, 1466, 1691, 1692, 1763, 1764
SchI	GAGTC	3 cut(s)	166, 359, 1046
ScrFI	CCNGG	4 cut(s)	221, 1308, 1410, 1470
SduI	GDGCHC	4 cut(s)	704, 1600, 1695, 1767
SexAI	ACCWGGT	2 cut(s)	1408, 1468
SfaNI	GCATC	3 cut(s)	1249, 1430, 1773
SinI	GGWCC	2 cut(s)	969, 1466
SmiMI	CAYNNNNRTG	2 cut(s)	807, 1758
SmlI	CTYRAG	1 cut(s)	1581
SmoI	CTYRAG	1 cut(s)	1581
SphI	GCATGC	1 cut(s)	1562
SsiI	CCGC	2 cut(s)	511, 1556
SspI	AATATT	1 cut(s)	252
SspMI	CTAG	4 cut(s)	81, 1086, 1196, 1794
StyD4I	CCNGG	4 cut(s)	219, 1306, 1408, 1468
StyI	CCWWGG	2 cut(s)	80, 1793
TaaI	ACNGT	2 cut(s)	543, 1390
TaiI	ACGT	3 cut(s)	169, 331, 1377
TaqI	TCGA	4 cut(s)	55, 87, 98, 172
TatI	WGTACW	2 cut(s)	403, 1127
TfiI	GAWTC	6 cut(s)	285, 491, 834, 932, 1229, 1525
Tru1I	TTAA	5 cut(s)	128, 380, 449, 947, 1722
Tru9I	TTAA	5 cut(s)	128, 380, 449, 947, 1722
TscAI	CASTG	4 cut(s)	979, 1150, 1362, 1614
TseFI	GTSAC	1 cut(s)	1357
TseI	GCWGC	3 cut(s)	1169, 1445, 1448
Tsp45I	GTSAC	1 cut(s)	1357
TspGWI	ACGGA	1 cut(s)	357
TspRI	CASTG	4 cut(s)	979, 1150, 1362, 1614
Tth111I	GACNNNGTC	1 cut(s)	349
Van91I	CCANNNNNTGG	1 cut(s)	1361
VpaK11BI	GGWCC	2 cut(s)	969, 1466
XapI	RAATTY	3 cut(s)	1393, 1436, 1541
XceI	RCATGY	4 cut(s)	195, 912, 1562, 1813
XcmI	CCANNNNNNNNNTGG	1 cut(s)	227
XmaJI	CCTAGG	2 cut(s)	80, 1793
XmiI	GTMKAC	2 cut(s)	240, 1806
XmnI	GAANNNNTTC	1 cut(s)	1541
XspI	CTAG	4 cut(s)	81, 1086, 1196, 1794

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.