cellular component assembly
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G58450 |
| fragaria_vesca | FvH4_2g32840 FvH4_2g32840 FvH4_2g32840 FvH4_2g32840 |
| malus_domestica | MD02G1098400.v1.1 MD15G1067100.v1.1 |
| prunus_persica | Prupe.1G420900_v2.0.a1 |
| pyrus_communis | pycom04g01900 pycom15g06360 |
| rosa_chinensis | RchiOBHm_Chr6g0254891 RchiOBHm_Chr6g0309861 |
| rosa_laevigata | RLG00000010529 RLG00000033960 |
| rosa_multiflora | Rmu_co8350909.1_g000001 Rmu_sc0001554.1_g000012 Rmu_sc0002908.1_g000022 Rmu_sc0021683.1_g000001 Rmu_sc0028480.1_g000001 Rmu_sc0035432.1_g000001 Rmu_ssc0000373.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00116390 Rroxscaffold_7G00159100 Rroxscaffold_7G00210070 Rroxscaffold_7G00210620 |
| rosa_rugosa | Rorug06G0184100 Rorug06G0375400 |
| rosa_samantha | Rh4DG166900 Rh5DG417300 Rh6AG488900 Rh6BG498400 Rh6CG269800 Rh6CG503200 Rh6DG489400 |
| rosa_wichuraiana | Rw6G042570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 359 |
| AcsI | RAATTY | 2 cut(s) | 131, 217 |
| AfaI | GTAC | 1 cut(s) | 77 |
| AflIII | ACRYGT | 1 cut(s) | 456 |
| AgsI | TTSAA | 3 cut(s) | 122, 137, 187 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 472 |
| AluBI | AGCT | 2 cut(s) | 281, 419 |
| AluI | AGCT | 2 cut(s) | 281, 419 |
| Alw21I | GWGCWC | 1 cut(s) | 298 |
| Alw26I | GTCTC | 2 cut(s) | 393, 429 |
| AlwI | GGATC | 1 cut(s) | 359 |
| ApeKI | GCWGC | 4 cut(s) | 26, 86, 107, 194 |
| ApoI | RAATTY | 2 cut(s) | 131, 217 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 141, 173 |
| AsuHPI | GGTGA | 1 cut(s) | 155 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 377, 409 |
| Bbv12I | GWGCWC | 1 cut(s) | 298 |
| BbvI | GCAGC | 4 cut(s) | 13, 94, 98, 206 |
| BcoDI | GTCTC | 2 cut(s) | 393, 429 |
| BfmI | CTRYAG | 2 cut(s) | 108, 199 |
| BisI | GCNGC | 4 cut(s) | 27, 87, 108, 195 |
| BlsI | GCNGC | 4 cut(s) | 28, 88, 109, 196 |
| BseMII | CTCAG | 2 cut(s) | 360, 411 |
| BseXI | GCAGC | 4 cut(s) | 13, 94, 98, 206 |
| BsgI | GTGCAG | 1 cut(s) | 213 |
| BsiHKAI | GWGCWC | 1 cut(s) | 298 |
| BsmAI | GTCTC | 2 cut(s) | 393, 429 |
| BsmBI | CGTCTC | 1 cut(s) | 429 |
| Bsp1286I | GDGCHC | 1 cut(s) | 298 |
| Bsp143I | GATC | 1 cut(s) | 364 |
| BspCNI | CTCAG | 2 cut(s) | 361, 412 |
| BspMAI | CTGCAG | 1 cut(s) | 112 |
| BspPI | GGATC | 1 cut(s) | 359 |
| BssMI | GATC | 1 cut(s) | 364 |
| Bst6I | CTCTTC | 1 cut(s) | 427 |
| BstC8I | GCNNGC | 2 cut(s) | 84, 294 |
| BstDEI | CTNAG | 3 cut(s) | 369, 420, 441 |
| BstKTI | GATC | 1 cut(s) | 367 |
| BstMAI | GTCTC | 2 cut(s) | 393, 429 |
| BstMBI | GATC | 1 cut(s) | 364 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 359 |
| BstNSI | RCATGY | 1 cut(s) | 460 |
| BstSFI | CTRYAG | 2 cut(s) | 108, 199 |
| BstV1I | GCAGC | 4 cut(s) | 13, 94, 98, 206 |
| BtgZI | GCGATG | 1 cut(s) | 416 |
| Cac8I | GCNNGC | 2 cut(s) | 84, 294 |
| CseI | GACGC | 1 cut(s) | 446 |
| Csp6I | GTAC | 1 cut(s) | 76 |
| CviAII | CATG | 2 cut(s) | 457, 492 |
| CviJI | RGCY | 8 cut(s) | 26, 107, 164, 197, 281, 353, 362, 419 |
| CviKI_1 | RGCY | 8 cut(s) | 26, 107, 164, 197, 281, 353, 362, 419 |
| CviQI | GTAC | 1 cut(s) | 76 |
| DdeI | CTNAG | 3 cut(s) | 369, 420, 441 |
| DpnI | GATC | 1 cut(s) | 366 |
| DpnII | GATC | 1 cut(s) | 364 |
| Eam1104I | CTCTTC | 1 cut(s) | 427 |
| EarI | CTCTTC | 1 cut(s) | 427 |
| Esp3I | CGTCTC | 1 cut(s) | 429 |
| FaeI | CATG | 2 cut(s) | 460, 495 |
| FatI | CATG | 2 cut(s) | 456, 491 |
| Fnu4HI | GCNGC | 4 cut(s) | 27, 87, 108, 195 |
| Fsp4HI | GCNGC | 4 cut(s) | 27, 87, 108, 195 |
| GluI | GCNGC | 4 cut(s) | 27, 87, 108, 195 |
| HgaI | GACGC | 1 cut(s) | 446 |
| Hin1II | CATG | 2 cut(s) | 460, 495 |
| HinfI | GANTC | 1 cut(s) | 373 |
| HphI | GGTGA | 1 cut(s) | 155 |
| Hpy188I | TCNGA | 1 cut(s) | 247 |
| Hpy188III | TCNNGA | 4 cut(s) | 184, 224, 368, 377 |
| HpyAV | CCTTC | 2 cut(s) | 41, 131 |
| HpyCH4V | TGCA | 4 cut(s) | 110, 194, 452, 464 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 359 |
| HpyF3I | CTNAG | 3 cut(s) | 369, 420, 441 |
| Hsp92II | CATG | 2 cut(s) | 460, 495 |
| Kzo9I | GATC | 1 cut(s) | 364 |
| LpnPI | CCDG | 3 cut(s) | 209, 211, 381 |
| Lsp1109I | GCAGC | 4 cut(s) | 13, 94, 98, 206 |
| MaeIII | GTNAC | 1 cut(s) | 143 |
| MalI | GATC | 1 cut(s) | 366 |
| MboI | GATC | 1 cut(s) | 364 |
| MboII | GAAGA | 3 cut(s) | 28, 56, 444 |
| MhlI | GDGCHC | 1 cut(s) | 298 |
| MluCI | AATT | 2 cut(s) | 131, 217 |
| MnlI | CCTC | 4 cut(s) | 16, 241, 304, 352 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 359 |
| NdeII | GATC | 1 cut(s) | 364 |
| NlaIII | CATG | 2 cut(s) | 460, 495 |
| NmuCI | GTSAC | 1 cut(s) | 143 |
| NspI | RCATGY | 1 cut(s) | 460 |
| PciI | ACATGT | 1 cut(s) | 456 |
| PfeI | GAWTC | 1 cut(s) | 373 |
| PkrI | GCNGC | 4 cut(s) | 28, 88, 109, 196 |
| PscI | ACATGT | 1 cut(s) | 456 |
| PstI | CTGCAG | 1 cut(s) | 112 |
| RsaI | GTAC | 1 cut(s) | 77 |
| RsaNI | GTAC | 1 cut(s) | 76 |
| SatI | GCNGC | 4 cut(s) | 27, 87, 108, 195 |
| Sau3AI | GATC | 1 cut(s) | 364 |
| SduI | GDGCHC | 1 cut(s) | 298 |
| SetI | ASST | 5 cut(s) | 142, 252, 283, 315, 421 |
| SfcI | CTRYAG | 2 cut(s) | 108, 199 |
| Sse9I | AATT | 2 cut(s) | 131, 217 |
| TasI | AATT | 2 cut(s) | 131, 217 |
| TfiI | GAWTC | 1 cut(s) | 373 |
| TseFI | GTSAC | 1 cut(s) | 143 |
| TseI | GCWGC | 4 cut(s) | 26, 86, 107, 194 |
| Tsp45I | GTSAC | 1 cut(s) | 143 |
| TspDTI | ATGAA | 2 cut(s) | 17, 419 |
| XapI | RAATTY | 2 cut(s) | 131, 217 |
| XceI | RCATGY | 1 cut(s) | 460 |